B3 domain-containing
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 |
| rosa_chinensis | RchiOBHm_Chr1g0343041 |
| rosa_laevigata | RLG00000029200 |
| rosa_multiflora | Rmu_sc0017585.1_g000001 Rmu_sc0038366.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00313300 |
| rosa_rugosa | Rorug01G0144500.1 Rorug01G0144600.1 |
| rosa_samantha | Rh1AG161000 Rh1BG128200 Rh1CG150500 Rh1DG164500 |
| rosa_wichuraiana | Rw1G013390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1483 |
| AccB1I | GGYRCC | 1 cut(s) | 2077 |
| AccI | GTMKAC | 3 cut(s) | 1028, 1792, 1814 |
| AccII | CGCG | 1 cut(s) | 559 |
| AciI | CCGC | 3 cut(s) | 112, 1818, 2019 |
| AcoI | YGGCCR | 2 cut(s) | 275, 1516 |
| AcsI | RAATTY | 7 cut(s) | 43, 218, 374, 391, 397, 941, 1857 |
| AcuI | CTGAAG | 4 cut(s) | 136, 149, 971, 1456 |
| AcyI | GRCGYC | 2 cut(s) | 2078, 2234 |
| AdeI | CACNNNGTG | 1 cut(s) | 918 |
| AfaI | GTAC | 6 cut(s) | 138, 430, 1322, 1424, 1530, 1677 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 361 |
| AflII | CTTAAG | 2 cut(s) | 71, 1337 |
| AflIII | ACRYGT | 2 cut(s) | 613, 1317 |
| AgsI | TTSAA | 8 cut(s) | 411, 605, 650, 784, 865, 1158, 1387, 1554 |
| AjnI | CCWGG | 1 cut(s) | 846 |
| Alw21I | GWGCWC | 2 cut(s) | 8, 2064 |
| Alw26I | GTCTC | 7 cut(s) | 175, 729, 1115, 1346, 1593, 1634, 1727 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 190, 1355, 1479 |
| AoxI | GGCC | 4 cut(s) | 265, 275, 1516, 1705 |
| ApeKI | GCWGC | 4 cut(s) | 1169, 1479, 1967, 2249 |
| ApoI | RAATTY | 7 cut(s) | 43, 218, 374, 391, 397, 941, 1857 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1469 |
| AspLEI | GCGC | 3 cut(s) | 772, 1484, 2080 |
| AspS9I | GGNCC | 1 cut(s) | 1705 |
| AsuHPI | GGTGA | 3 cut(s) | 101, 1375, 2195 |
| AsuII | TTCGAA | 1 cut(s) | 395 |
| BaeGI | GKGCMC | 1 cut(s) | 2019 |
| BalI | TGGCCA | 2 cut(s) | 277, 1518 |
| BanI | GGYRCC | 1 cut(s) | 2077 |
| BanII | GRGCYC | 1 cut(s) | 995 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1173, 1205 |
| BbsI | GAAGAC | 2 cut(s) | 719, 1188 |
| Bbv12I | GWGCWC | 2 cut(s) | 8, 2064 |
| BbvI | GCAGC | 4 cut(s) | 1181, 1466, 1954, 2261 |
| BccI | CCATC | 5 cut(s) | 547, 1280, 1443, 2135, 2139 |
| BciT130I | CCWGG | 1 cut(s) | 848 |
| BciVI | GTATCC | 1 cut(s) | 1574 |
| BclI | TGATCA | 1 cut(s) | 832 |
| BcoDI | GTCTC | 7 cut(s) | 175, 729, 1115, 1346, 1593, 1634, 1727 |
| BfaI | CTAG | 9 cut(s) | 663, 777, 855, 1461, 1784, 1904, 2022, 2211, 2266 |
| BfmI | CTRYAG | 1 cut(s) | 1833 |
| BfoI | RGCGCY | 2 cut(s) | 773, 2081 |
| BfrI | CTTAAG | 2 cut(s) | 71, 1337 |
| BfuI | GTATCC | 1 cut(s) | 1574 |
| BglII | AGATCT | 1 cut(s) | 1771 |
| BisI | GCNGC | 4 cut(s) | 1170, 1480, 1968, 2250 |
| BlsI | GCNGC | 4 cut(s) | 1171, 1481, 1969, 2251 |
| BmcAI | AGTACT | 1 cut(s) | 1677 |
| Bme1390I | CCNGG | 1 cut(s) | 848 |
| BmgT120I | GGNCC | 1 cut(s) | 1705 |
| BmiI | GGNNCC | 2 cut(s) | 1706, 2079 |
| BmrFI | CCNGG | 1 cut(s) | 848 |
| BmrI | ACTGGG | 2 cut(s) | 1531, 2051 |
| BmsI | GCATC | 6 cut(s) | 481, 520, 685, 1052, 1930, 2047 |
| BmuI | ACTGGG | 2 cut(s) | 1531, 2051 |
| BpiI | GAAGAC | 2 cut(s) | 719, 1188 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1247, 1279 |
| BpmI | CTGGAG | 2 cut(s) | 14, 830 |
| Bpu14I | TTCGAA | 1 cut(s) | 395 |
| BpuEI | CTTGAG | 4 cut(s) | 616, 733, 1180, 2093 |
| BsaAI | YACGTR | 1 cut(s) | 1320 |
| BsaBI | GATNNNNATC | 1 cut(s) | 471 |
| BsaHI | GRCGYC | 2 cut(s) | 2078, 2234 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 361 |
| Bse118I | RCCGGY | 1 cut(s) | 114 |
| Bse1I | ACTGG | 3 cut(s) | 278, 1526, 2057 |
| Bse3DI | GCAATG | 1 cut(s) | 2099 |
| Bse8I | GATNNNNATC | 1 cut(s) | 471 |
| BseBI | CCWGG | 1 cut(s) | 848 |
| BseGI | GGATG | 6 cut(s) | 472, 539, 1018, 1067, 1531, 2150 |
| BseJI | GATNNNNATC | 1 cut(s) | 471 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 361 |
| BseMI | GCAATG | 1 cut(s) | 2099 |
| BseMII | CTCAG | 4 cut(s) | 56, 423, 939, 1347 |
| BseNI | ACTGG | 3 cut(s) | 278, 1526, 2057 |
| BseRI | GAGGAG | 1 cut(s) | 2149 |
| BseSI | GKGCMC | 1 cut(s) | 2019 |
| BseXI | GCAGC | 4 cut(s) | 1181, 1466, 1954, 2261 |
| BsgI | GTGCAG | 3 cut(s) | 911, 1188, 2268 |
| Bsh1236I | CGCG | 1 cut(s) | 559 |
| BshFI | GGCC | 4 cut(s) | 267, 277, 1518, 1707 |
| BshNI | GGYRCC | 1 cut(s) | 2077 |
| BsiHKAI | GWGCWC | 2 cut(s) | 8, 2064 |
| BsiSI | CCGG | 2 cut(s) | 115, 128 |
| BslFI | GGGAC | 1 cut(s) | 377 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 361 |
| BsmAI | GTCTC | 7 cut(s) | 175, 729, 1115, 1346, 1593, 1634, 1727 |
| BsmFI | GGGAC | 1 cut(s) | 377 |
| BsmI | GAATGC | 4 cut(s) | 78, 622, 2057, 2153 |
| BsnI | GGCC | 4 cut(s) | 267, 277, 1518, 1707 |
| Bsp119I | TTCGAA | 1 cut(s) | 395 |
| Bsp1286I | GDGCHC | 4 cut(s) | 8, 995, 2019, 2064 |
| Bsp1407I | TGTACA | 1 cut(s) | 1528 |
| Bsp143I | GATC | 7 cut(s) | 560, 727, 832, 1365, 1413, 1771, 1893 |
| Bsp68I | TCGCGA | 1 cut(s) | 559 |
| BspACI | CCGC | 3 cut(s) | 112, 1818, 2019 |
| BspANI | GGCC | 4 cut(s) | 267, 277, 1518, 1707 |
| BspCNI | CTCAG | 4 cut(s) | 57, 424, 940, 1348 |
| BspFNI | CGCG | 1 cut(s) | 559 |
| BspLI | GGNNCC | 2 cut(s) | 1706, 2079 |
| BspT104I | TTCGAA | 1 cut(s) | 395 |
| BspT107I | GGYRCC | 1 cut(s) | 2077 |
| BspTI | CTTAAG | 2 cut(s) | 71, 1337 |
| BsrDI | GCAATG | 1 cut(s) | 2099 |
| BsrFI | RCCGGY | 1 cut(s) | 114 |
| BsrGI | TGTACA | 1 cut(s) | 1528 |
| BsrI | ACTGG | 3 cut(s) | 278, 1526, 2057 |
| BssAI | RCCGGY | 1 cut(s) | 114 |
| BssMI | GATC | 7 cut(s) | 560, 727, 832, 1365, 1413, 1771, 1893 |
| BssNI | GRCGYC | 2 cut(s) | 2078, 2234 |
| Bst2UI | CCWGG | 1 cut(s) | 848 |
| Bst4CI | ACNGT | 1 cut(s) | 141 |
| BstACI | GRCGYC | 2 cut(s) | 2078, 2234 |
| BstAFI | CTTAAG | 2 cut(s) | 71, 1337 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1062 |
| BstAUI | TGTACA | 1 cut(s) | 1528 |
| BstBAI | YACGTR | 1 cut(s) | 1320 |
| BstBI | TTCGAA | 1 cut(s) | 395 |
| BstC8I | GCNNGC | 5 cut(s) | 330, 774, 802, 1221, 2019 |
| BstDEI | CTNAG | 8 cut(s) | 65, 370, 432, 915, 948, 1356, 1737, 1890 |
| BstF5I | GGATG | 6 cut(s) | 472, 539, 1018, 1067, 1531, 2150 |
| BstFNI | CGCG | 1 cut(s) | 559 |
| BstH2I | RGCGCY | 2 cut(s) | 773, 2081 |
| BstHHI | GCGC | 3 cut(s) | 772, 1484, 2080 |
| BstKTI | GATC | 7 cut(s) | 563, 730, 835, 1368, 1416, 1774, 1896 |
| BstMAI | GTCTC | 7 cut(s) | 175, 729, 1115, 1346, 1593, 1634, 1727 |
| BstMBI | GATC | 7 cut(s) | 560, 727, 832, 1365, 1413, 1771, 1893 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 175, 1062, 2258 |
| BstNI | CCWGG | 1 cut(s) | 848 |
| BstNSI | RCATGY | 4 cut(s) | 617, 862, 934, 1056 |
| BstSCI | CCNGG | 1 cut(s) | 846 |
| BstSFI | CTRYAG | 1 cut(s) | 1833 |
| BstSLI | GKGCMC | 1 cut(s) | 2019 |
| BstUI | CGCG | 1 cut(s) | 559 |
| BstV1I | GCAGC | 4 cut(s) | 1181, 1466, 1954, 2261 |
| BstV2I | GAAGAC | 2 cut(s) | 719, 1188 |
| BstX2I | RGATCY | 1 cut(s) | 1771 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 18, 2041 |
| BstYI | RGATCY | 1 cut(s) | 1771 |
| BsuI | GTATCC | 1 cut(s) | 1574 |
| BsuRI | GGCC | 4 cut(s) | 267, 277, 1518, 1707 |
| BtsCI | GGATG | 6 cut(s) | 472, 539, 1018, 1067, 1531, 2150 |
| BtsI | GCAGTG | 1 cut(s) | 1013 |
| BtsIMutI | CAGTG | 7 cut(s) | 62, 285, 570, 1013, 1519, 1942, 2064 |
| BtuMI | TCGCGA | 1 cut(s) | 559 |
| Cac8I | GCNNGC | 5 cut(s) | 330, 774, 802, 1221, 2019 |
| CaiI | CAGNNNCTG | 3 cut(s) | 190, 1355, 1479 |
| CfoI | GCGC | 3 cut(s) | 772, 1484, 2080 |
| Cfr10I | RCCGGY | 1 cut(s) | 114 |
| Cfr13I | GGNCC | 1 cut(s) | 1705 |
| CseI | GACGC | 2 cut(s) | 1014, 2223 |
| Csp6I | GTAC | 6 cut(s) | 137, 429, 1321, 1423, 1529, 1676 |
| CviQI | GTAC | 6 cut(s) | 137, 429, 1321, 1423, 1529, 1676 |
| DdeI | CTNAG | 8 cut(s) | 65, 370, 432, 915, 948, 1356, 1737, 1890 |
| DinI | GGCGCC | 1 cut(s) | 2079 |
| DpnI | GATC | 7 cut(s) | 562, 729, 834, 1367, 1415, 1773, 1895 |
| DpnII | GATC | 7 cut(s) | 560, 727, 832, 1365, 1413, 1771, 1893 |
| DraIII | CACNNNGTG | 1 cut(s) | 918 |
| EaeI | YGGCCR | 2 cut(s) | 275, 1516 |
| Eco24I | GRGCYC | 1 cut(s) | 995 |
| Eco32I | GATATC | 2 cut(s) | 683, 1751 |
| Eco57I | CTGAAG | 4 cut(s) | 136, 149, 971, 1456 |
| EcoRI | GAATTC | 1 cut(s) | 391 |
| EcoRII | CCWGG | 1 cut(s) | 846 |
| EcoRV | GATATC | 2 cut(s) | 683, 1751 |
| EcoT22I | ATGCAT | 2 cut(s) | 1067, 1248 |
| EcoT38I | GRGCYC | 1 cut(s) | 995 |
| EgeI | GGCGCC | 1 cut(s) | 2079 |
| EheI | GGCGCC | 1 cut(s) | 2079 |
| FaqI | GGGAC | 1 cut(s) | 377 |
| FauI | CCCGC | 1 cut(s) | 2026 |
| FbaI | TGATCA | 1 cut(s) | 832 |
| FblI | GTMKAC | 3 cut(s) | 1028, 1792, 1814 |
| Fnu4HI | GCNGC | 4 cut(s) | 1170, 1480, 1968, 2250 |
| FokI | GGATG | 6 cut(s) | 459, 526, 1025, 1074, 1538, 2157 |
| FriOI | GRGCYC | 1 cut(s) | 995 |
| Fsp4HI | GCNGC | 4 cut(s) | 1170, 1480, 1968, 2250 |
| FspBI | CTAG | 9 cut(s) | 663, 777, 855, 1461, 1784, 1904, 2022, 2211, 2266 |
| FspI | TGCGCA | 1 cut(s) | 1483 |
| GlaI | GCGC | 3 cut(s) | 771, 1483, 2079 |
| GluI | GCNGC | 4 cut(s) | 1170, 1480, 1968, 2250 |
| GsuI | CTGGAG | 2 cut(s) | 14, 830 |
| HaeII | RGCGCY | 2 cut(s) | 773, 2081 |
| HaeIII | GGCC | 4 cut(s) | 267, 277, 1518, 1707 |
| HapII | CCGG | 2 cut(s) | 115, 128 |
| HgaI | GACGC | 2 cut(s) | 1014, 2223 |
| HhaI | GCGC | 3 cut(s) | 772, 1484, 2080 |
| Hin1I | GRCGYC | 2 cut(s) | 2078, 2234 |
| Hin6I | GCGC | 3 cut(s) | 770, 1482, 2078 |
| HinP1I | GCGC | 3 cut(s) | 770, 1482, 2078 |
| HincII | GTYRAC | 3 cut(s) | 298, 816, 1138 |
| HindII | GTYRAC | 3 cut(s) | 298, 816, 1138 |
| HinfI | GANTC | 9 cut(s) | 27, 34, 98, 106, 193, 746, 1033, 1487, 1505 |
| HpaI | GTTAAC | 2 cut(s) | 298, 816 |
| HpaII | CCGG | 2 cut(s) | 115, 128 |
| HphI | GGTGA | 3 cut(s) | 101, 1375, 2195 |
| Hpy166II | GTNNAC | 7 cut(s) | 298, 816, 1029, 1138, 1453, 1793, 1815 |
| Hpy188III | TCNNGA | 8 cut(s) | 31, 154, 452, 491, 558, 809, 1229, 2174 |
| Hpy8I | GTNNAC | 7 cut(s) | 298, 816, 1029, 1138, 1453, 1793, 1815 |
| HpyAV | CCTTC | 3 cut(s) | 1047, 1354, 2174 |
| HpyCH4III | ACNGT | 1 cut(s) | 141 |
| HpyCH4IV | ACGT | 2 cut(s) | 405, 1319 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 175, 1062, 2258 |
| HpyF3I | CTNAG | 8 cut(s) | 65, 370, 432, 915, 948, 1356, 1737, 1890 |
| HpySE526I | ACGT | 2 cut(s) | 405, 1319 |
| Hsp92I | GRCGYC | 2 cut(s) | 2078, 2234 |
| HspAI | GCGC | 3 cut(s) | 770, 1482, 2078 |
| KasI | GGCGCC | 1 cut(s) | 2077 |
| Ksp22I | TGATCA | 1 cut(s) | 832 |
| KspAI | GTTAAC | 2 cut(s) | 298, 816 |
| Kzo9I | GATC | 7 cut(s) | 560, 727, 832, 1365, 1413, 1771, 1893 |
| LmnI | GCTCC | 2 cut(s) | 11, 1612 |
| Lsp1109I | GCAGC | 4 cut(s) | 1181, 1466, 1954, 2261 |
| LweI | GCATC | 6 cut(s) | 481, 520, 685, 1052, 1930, 2047 |
| MaeI | CTAG | 9 cut(s) | 663, 777, 855, 1461, 1784, 1904, 2022, 2211, 2266 |
| MaeII | ACGT | 2 cut(s) | 405, 1319 |
| MaeIII | GTNAC | 4 cut(s) | 50, 518, 635, 757 |
| MalI | GATC | 7 cut(s) | 562, 729, 834, 1367, 1415, 1773, 1895 |
| MboI | GATC | 7 cut(s) | 560, 727, 832, 1365, 1413, 1771, 1893 |
| MflI | RGATCY | 1 cut(s) | 1771 |
| MhlI | GDGCHC | 4 cut(s) | 8, 995, 2019, 2064 |
| MlsI | TGGCCA | 2 cut(s) | 277, 1518 |
| MluNI | TGGCCA | 2 cut(s) | 277, 1518 |
| Mly113I | GGCGCC | 1 cut(s) | 2078 |
| MlyI | GAGTC | 4 cut(s) | 21, 100, 107, 740 |
| MmeI | TCCRAC | 1 cut(s) | 224 |
| Mox20I | TGGCCA | 2 cut(s) | 277, 1518 |
| Mph1103I | ATGCAT | 2 cut(s) | 1067, 1248 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1469 |
| MscI | TGGCCA | 2 cut(s) | 277, 1518 |
| MseI | TTAA | 7 cut(s) | 72, 297, 815, 1068, 1076, 1338, 1728 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1524 |
| Msp20I | TGGCCA | 2 cut(s) | 277, 1518 |
| MspA1I | CMGCKG | 2 cut(s) | 1172, 2252 |
| MspCI | CTTAAG | 2 cut(s) | 71, 1337 |
| MspI | CCGG | 2 cut(s) | 115, 128 |
| MspR9I | CCNGG | 1 cut(s) | 848 |
| Mva1269I | GAATGC | 4 cut(s) | 78, 622, 2057, 2153 |
| MvaI | CCWGG | 1 cut(s) | 848 |
| MvnI | CGCG | 1 cut(s) | 559 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 175, 1062, 2258 |
| NarI | GGCGCC | 1 cut(s) | 2078 |
| NdeII | GATC | 7 cut(s) | 560, 727, 832, 1365, 1413, 1771, 1893 |
| NlaIV | GGNNCC | 2 cut(s) | 1706, 2079 |
| NmuCI | GTSAC | 2 cut(s) | 518, 757 |
| NruI | TCGCGA | 1 cut(s) | 559 |
| NsbI | TGCGCA | 1 cut(s) | 1483 |
| NsiI | ATGCAT | 2 cut(s) | 1067, 1248 |
| NspI | RCATGY | 4 cut(s) | 617, 862, 934, 1056 |
| NspV | TTCGAA | 1 cut(s) | 395 |
| PciI | ACATGT | 1 cut(s) | 613 |
| PctI | GAATGC | 4 cut(s) | 78, 622, 2057, 2153 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1469 |
| PfeI | GAWTC | 5 cut(s) | 34, 193, 1033, 1487, 1505 |
| PkrI | GCNGC | 4 cut(s) | 1171, 1481, 1969, 2251 |
| PleI | GAGTC | 4 cut(s) | 21, 100, 106, 740 |
| PluTI | GGCGCC | 1 cut(s) | 2081 |
| PpsI | GAGTC | 4 cut(s) | 21, 100, 106, 740 |
| Ppu21I | YACGTR | 1 cut(s) | 1320 |
| PscI | ACATGT | 1 cut(s) | 613 |
| Psp6I | CCWGG | 1 cut(s) | 846 |
| PspGI | CCWGG | 1 cut(s) | 846 |
| PspN4I | GGNNCC | 2 cut(s) | 1706, 2079 |
| PspPI | GGNCC | 1 cut(s) | 1705 |
| PstNI | CAGNNNCTG | 3 cut(s) | 190, 1355, 1479 |
| PsuI | RGATCY | 1 cut(s) | 1771 |
| PvuII | CAGCTG | 2 cut(s) | 1172, 2252 |
| RruI | TCGCGA | 1 cut(s) | 559 |
| RsaI | GTAC | 6 cut(s) | 138, 430, 1322, 1424, 1530, 1677 |
| RsaNI | GTAC | 6 cut(s) | 137, 429, 1321, 1423, 1529, 1676 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1524 |
| SaqAI | TTAA | 7 cut(s) | 72, 297, 815, 1068, 1076, 1338, 1728 |
| SatI | GCNGC | 4 cut(s) | 1170, 1480, 1968, 2250 |
| Sau3AI | GATC | 7 cut(s) | 560, 727, 832, 1365, 1413, 1771, 1893 |
| Sau96I | GGNCC | 1 cut(s) | 1705 |
| ScaI | AGTACT | 1 cut(s) | 1677 |
| SchI | GAGTC | 4 cut(s) | 21, 100, 107, 740 |
| ScrFI | CCNGG | 1 cut(s) | 848 |
| SduI | GDGCHC | 4 cut(s) | 8, 995, 2019, 2064 |
| SfaNI | GCATC | 6 cut(s) | 481, 520, 685, 1052, 1930, 2047 |
| SfcI | CTRYAG | 1 cut(s) | 1833 |
| SfoI | GGCGCC | 1 cut(s) | 2079 |
| SfuI | TTCGAA | 1 cut(s) | 395 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1524 |
| SmlI | CTYRAG | 6 cut(s) | 71, 631, 748, 1195, 1337, 2072 |
| SmoI | CTYRAG | 6 cut(s) | 71, 631, 748, 1195, 1337, 2072 |
| SsiI | CCGC | 3 cut(s) | 112, 1818, 2019 |
| SspDI | GGCGCC | 1 cut(s) | 2077 |
| SspI | AATATT | 3 cut(s) | 414, 956, 2241 |
| SspMI | CTAG | 9 cut(s) | 663, 777, 855, 1461, 1784, 1904, 2022, 2211, 2266 |
| StyD4I | CCNGG | 1 cut(s) | 846 |
| TaaI | ACNGT | 1 cut(s) | 141 |
| TaiI | ACGT | 2 cut(s) | 408, 1322 |
| TaqI | TCGA | 4 cut(s) | 395, 1331, 1753, 1896 |
| TatI | WGTACW | 4 cut(s) | 428, 1422, 1528, 1675 |
| TfiI | GAWTC | 5 cut(s) | 34, 193, 1033, 1487, 1505 |
| Tru1I | TTAA | 7 cut(s) | 72, 297, 815, 1068, 1076, 1338, 1728 |
| Tru9I | TTAA | 7 cut(s) | 72, 297, 815, 1068, 1076, 1338, 1728 |
| TscAI | CASTG | 7 cut(s) | 69, 285, 570, 1013, 1526, 1942, 2064 |
| TseFI | GTSAC | 2 cut(s) | 518, 757 |
| TseI | GCWGC | 4 cut(s) | 1169, 1479, 1967, 2249 |
| Tsp45I | GTSAC | 2 cut(s) | 518, 757 |
| TspGWI | ACGGA | 3 cut(s) | 344, 1593, 1670 |
| TspRI | CASTG | 7 cut(s) | 69, 285, 570, 1013, 1526, 1942, 2064 |
| Vha464I | CTTAAG | 2 cut(s) | 71, 1337 |
| XapI | RAATTY | 7 cut(s) | 43, 218, 374, 391, 397, 941, 1857 |
| XceI | RCATGY | 4 cut(s) | 617, 862, 934, 1056 |
| XmiI | GTMKAC | 3 cut(s) | 1028, 1792, 1814 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1469 |
| XspI | CTAG | 9 cut(s) | 663, 777, 855, 1461, 1784, 1904, 2022, 2211, 2266 |
| ZrmI | AGTACT | 1 cut(s) | 1677 |
| Zsp2I | ATGCAT | 2 cut(s) | 1067, 1248 |