B3 domain-containing
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 FvH4_7g07610 |
| rosa_chinensis | RchiOBHm_Chr1g0343041 |
| rosa_laevigata | RLG00000029200 |
| rosa_multiflora | Rmu_sc0017585.1_g000001 Rmu_sc0038366.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00313300 |
| rosa_rugosa | Rorug01G0144500.1 Rorug01G0144600.1 |
| rosa_samantha | Rh1AG161000 Rh1BG128200 Rh1CG150500 Rh1DG164500 |
| rosa_wichuraiana | Rw1G013390 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1390 |
| Acc65I | GGTACC | 1 cut(s) | 437 |
| AccB1I | GGYRCC | 2 cut(s) | 437, 1984 |
| AccI | GTMKAC | 1 cut(s) | 935 |
| AciI | CCGC | 3 cut(s) | 1742, 1999, 2168 |
| AclWI | GGATC | 1 cut(s) | 745 |
| AcoI | YGGCCR | 2 cut(s) | 172, 1423 |
| AcuI | CTGAAG | 4 cut(s) | 43, 56, 878, 2156 |
| AcyI | GRCGYC | 1 cut(s) | 1985 |
| AfaI | GTAC | 2 cut(s) | 439, 1584 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1368 |
| AflII | CTTAAG | 1 cut(s) | 1244 |
| AflIII | ACRYGT | 2 cut(s) | 496, 514 |
| AjiI | CACGTC | 1 cut(s) | 1048 |
| AjnI | CCWGG | 1 cut(s) | 753 |
| Alw26I | GTCTC | 6 cut(s) | 82, 633, 1253, 1541, 1693, 1725 |
| AlwI | GGATC | 1 cut(s) | 745 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 97 |
| AoxI | GGCC | 3 cut(s) | 172, 1128, 1423 |
| ApeKI | GCWGC | 6 cut(s) | 805, 1076, 1386, 1847, 2013, 2156 |
| Asp718I | GGTACC | 1 cut(s) | 437 |
| AspLEI | GCGC | 3 cut(s) | 676, 1391, 1987 |
| AspS9I | GGNCC | 1 cut(s) | 1612 |
| AsuHPI | GGTGA | 2 cut(s) | 8, 1282 |
| AvaII | GGWCC | 1 cut(s) | 1612 |
| AxyI | CCTNAGG | 1 cut(s) | 1472 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 532, 565 |
| BalI | TGGCCA | 1 cut(s) | 1425 |
| BanI | GGYRCC | 2 cut(s) | 437, 1984 |
| BbsI | GAAGAC | 4 cut(s) | 517, 623, 1095, 1611 |
| BbvCI | CCTCAGC | 1 cut(s) | 98 |
| BbvI | GCAGC | 6 cut(s) | 817, 1088, 1373, 1834, 2000, 2168 |
| BccI | CCATC | 5 cut(s) | 410, 893, 1187, 1350, 2046 |
| BceAI | ACGGC | 1 cut(s) | 159 |
| BciT130I | CCWGG | 1 cut(s) | 755 |
| BciVI | GTATCC | 1 cut(s) | 1481 |
| BcoDI | GTCTC | 6 cut(s) | 82, 633, 1253, 1541, 1693, 1725 |
| BfmI | CTRYAG | 1 cut(s) | 1406 |
| BfoI | RGCGCY | 2 cut(s) | 677, 1988 |
| BfrI | CTTAAG | 1 cut(s) | 1244 |
| BfuI | GTATCC | 1 cut(s) | 1481 |
| BisI | GCNGC | 6 cut(s) | 806, 1077, 1387, 1848, 2014, 2157 |
| BlsI | GCNGC | 6 cut(s) | 807, 1078, 1388, 1849, 2015, 2158 |
| BmcAI | AGTACT | 1 cut(s) | 1584 |
| Bme1390I | CCNGG | 1 cut(s) | 755 |
| Bme18I | GGWCC | 1 cut(s) | 1612 |
| BmgBI | CACGTC | 1 cut(s) | 1048 |
| BmgT120I | GGNCC | 1 cut(s) | 1612 |
| BmiI | GGNNCC | 2 cut(s) | 439, 1986 |
| BmrFI | CCNGG | 1 cut(s) | 755 |
| BmsI | GCATC | 1 cut(s) | 1954 |
| BpiI | GAAGAC | 4 cut(s) | 517, 623, 1095, 1611 |
| Bpu10I | CCTNAGC | 1 cut(s) | 98 |
| BpuEI | CTTGAG | 3 cut(s) | 637, 1087, 2000 |
| BsaHI | GRCGYC | 1 cut(s) | 1985 |
| BsaWI | WCCGGW | 1 cut(s) | 18 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 430, 460 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1368 |
| Bse1I | ACTGG | 1 cut(s) | 175 |
| Bse21I | CCTNAGG | 1 cut(s) | 1472 |
| BseBI | CCWGG | 1 cut(s) | 755 |
| BseGI | GGATG | 3 cut(s) | 925, 1438, 2057 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1368 |
| BseMII | CTCAG | 5 cut(s) | 89, 330, 846, 1254, 2082 |
| BseNI | ACTGG | 1 cut(s) | 175 |
| BseRI | GAGGAG | 2 cut(s) | 438, 2056 |
| BseXI | GCAGC | 6 cut(s) | 817, 1088, 1373, 1834, 2000, 2168 |
| BsgI | GTGCAG | 3 cut(s) | 1095, 1999, 2175 |
| BshFI | GGCC | 3 cut(s) | 174, 1130, 1425 |
| BshNI | GGYRCC | 2 cut(s) | 437, 1984 |
| BsiSI | CCGG | 2 cut(s) | 19, 35 |
| BslFI | GGGAC | 1 cut(s) | 284 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1368 |
| BsmAI | GTCTC | 6 cut(s) | 82, 633, 1253, 1541, 1693, 1725 |
| BsmFI | GGGAC | 1 cut(s) | 284 |
| BsmI | GAATGC | 5 cut(s) | 379, 705, 972, 1964, 2060 |
| BsnI | GGCC | 3 cut(s) | 174, 1130, 1425 |
| Bsp143I | GATC | 1 cut(s) | 750 |
| BspACI | CCGC | 3 cut(s) | 1742, 1999, 2168 |
| BspANI | GGCC | 3 cut(s) | 174, 1130, 1425 |
| BspCNI | CTCAG | 5 cut(s) | 90, 331, 847, 1255, 2081 |
| BspHI | TCATGA | 1 cut(s) | 394 |
| BspLI | GGNNCC | 2 cut(s) | 439, 1986 |
| BspPI | GGATC | 1 cut(s) | 745 |
| BspT107I | GGYRCC | 2 cut(s) | 437, 1984 |
| BspTI | CTTAAG | 1 cut(s) | 1244 |
| BsrI | ACTGG | 1 cut(s) | 175 |
| BssMI | GATC | 1 cut(s) | 750 |
| BssNI | GRCGYC | 1 cut(s) | 1985 |
| Bst2UI | CCWGG | 1 cut(s) | 755 |
| Bst4CI | ACNGT | 2 cut(s) | 48, 163 |
| Bst6I | CTCTTC | 3 cut(s) | 264, 393, 996 |
| BstACI | GRCGYC | 1 cut(s) | 1985 |
| BstAFI | CTTAAG | 1 cut(s) | 1244 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 969, 2165 |
| BstC8I | GCNNGC | 4 cut(s) | 237, 678, 1128, 1926 |
| BstDEI | CTNAG | 8 cut(s) | 98, 339, 855, 1263, 1472, 1797, 1941, 2068 |
| BstEII | GGTNACC | 1 cut(s) | 1270 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1366 |
| BstF5I | GGATG | 3 cut(s) | 925, 1438, 2057 |
| BstH2I | RGCGCY | 2 cut(s) | 677, 1988 |
| BstHHI | GCGC | 3 cut(s) | 676, 1391, 1987 |
| BstKTI | GATC | 1 cut(s) | 753 |
| BstMAI | GTCTC | 6 cut(s) | 82, 633, 1253, 1541, 1693, 1725 |
| BstMBI | GATC | 1 cut(s) | 750 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 82, 969, 1132, 1844, 2165 |
| BstNI | CCWGG | 1 cut(s) | 755 |
| BstNSI | RCATGY | 4 cut(s) | 85, 500, 518, 839 |
| BstPI | GGTNACC | 1 cut(s) | 1270 |
| BstSCI | CCNGG | 1 cut(s) | 753 |
| BstSFI | CTRYAG | 1 cut(s) | 1406 |
| BstV1I | GCAGC | 6 cut(s) | 817, 1088, 1373, 1834, 2000, 2168 |
| BstV2I | GAAGAC | 4 cut(s) | 517, 623, 1095, 1611 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1472 |
| BsuI | GTATCC | 1 cut(s) | 1481 |
| BsuRI | GGCC | 3 cut(s) | 174, 1130, 1425 |
| BtgZI | GCGATG | 1 cut(s) | 1542 |
| BtrI | CACGTC | 1 cut(s) | 1048 |
| BtsCI | GGATG | 3 cut(s) | 925, 1438, 2057 |
| BtsI | GCAGTG | 1 cut(s) | 920 |
| BtsIMutI | CAGTG | 2 cut(s) | 168, 920 |
| Cac8I | GCNNGC | 4 cut(s) | 237, 678, 1128, 1926 |
| CaiI | CAGNNNCTG | 1 cut(s) | 97 |
| CciI | TCATGA | 1 cut(s) | 394 |
| CfoI | GCGC | 3 cut(s) | 676, 1391, 1987 |
| Cfr13I | GGNCC | 1 cut(s) | 1612 |
| Csp6I | GTAC | 2 cut(s) | 438, 1583 |
| CviQI | GTAC | 2 cut(s) | 438, 1583 |
| DdeI | CTNAG | 8 cut(s) | 98, 339, 855, 1263, 1472, 1797, 1941, 2068 |
| DinI | GGCGCC | 1 cut(s) | 1986 |
| DpnI | GATC | 1 cut(s) | 752 |
| DpnII | GATC | 1 cut(s) | 750 |
| EaeI | YGGCCR | 2 cut(s) | 172, 1423 |
| Eam1104I | CTCTTC | 3 cut(s) | 264, 393, 996 |
| EarI | CTCTTC | 3 cut(s) | 264, 393, 996 |
| Eco47I | GGWCC | 1 cut(s) | 1612 |
| Eco57I | CTGAAG | 4 cut(s) | 43, 56, 878, 2156 |
| Eco81I | CCTNAGG | 1 cut(s) | 1472 |
| Eco91I | GGTNACC | 1 cut(s) | 1270 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1366 |
| EcoO65I | GGTNACC | 1 cut(s) | 1270 |
| EcoRI | GAATTC | 1 cut(s) | 298 |
| EcoRII | CCWGG | 1 cut(s) | 753 |
| EgeI | GGCGCC | 1 cut(s) | 1986 |
| EheI | GGCGCC | 1 cut(s) | 1986 |
| FaqI | GGGAC | 1 cut(s) | 284 |
| FblI | GTMKAC | 1 cut(s) | 935 |
| Fnu4HI | GCNGC | 6 cut(s) | 806, 1077, 1387, 1848, 2014, 2157 |
| FokI | GGATG | 3 cut(s) | 932, 1445, 2064 |
| Fsp4HI | GCNGC | 6 cut(s) | 806, 1077, 1387, 1848, 2014, 2157 |
| FspI | TGCGCA | 1 cut(s) | 1390 |
| GlaI | GCGC | 3 cut(s) | 675, 1390, 1986 |
| GluI | GCNGC | 6 cut(s) | 806, 1077, 1387, 1848, 2014, 2157 |
| HaeII | RGCGCY | 2 cut(s) | 677, 1988 |
| HaeIII | GGCC | 3 cut(s) | 174, 1130, 1425 |
| HapII | CCGG | 2 cut(s) | 19, 35 |
| HhaI | GCGC | 3 cut(s) | 676, 1391, 1987 |
| Hin1I | GRCGYC | 1 cut(s) | 1985 |
| Hin6I | GCGC | 3 cut(s) | 674, 1389, 1985 |
| HinP1I | GCGC | 3 cut(s) | 674, 1389, 1985 |
| HincII | GTYRAC | 1 cut(s) | 205 |
| HindII | GTYRAC | 1 cut(s) | 205 |
| HinfI | GANTC | 9 cut(s) | 5, 13, 391, 535, 765, 881, 1100, 1138, 1412 |
| HpaII | CCGG | 2 cut(s) | 19, 35 |
| HphI | GGTGA | 2 cut(s) | 8, 1282 |
| Hpy166II | GTNNAC | 3 cut(s) | 44, 205, 936 |
| Hpy188III | TCNNGA | 6 cut(s) | 359, 395, 488, 503, 713, 1861 |
| Hpy8I | GTNNAC | 3 cut(s) | 44, 205, 936 |
| HpyAV | CCTTC | 9 cut(s) | 287, 629, 682, 954, 1261, 1745, 1888, 2081, 2131 |
| HpyCH4III | ACNGT | 2 cut(s) | 48, 163 |
| HpyCH4IV | ACGT | 1 cut(s) | 1047 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 82, 969, 1132, 1844, 2165 |
| HpyF3I | CTNAG | 8 cut(s) | 98, 339, 855, 1263, 1472, 1797, 1941, 2068 |
| HpySE526I | ACGT | 1 cut(s) | 1047 |
| Hsp92I | GRCGYC | 1 cut(s) | 1985 |
| HspAI | GCGC | 3 cut(s) | 674, 1389, 1985 |
| KasI | GGCGCC | 1 cut(s) | 1984 |
| KpnI | GGTACC | 1 cut(s) | 441 |
| Kzo9I | GATC | 1 cut(s) | 750 |
| LmnI | GCTCC | 1 cut(s) | 1519 |
| Lsp1109I | GCAGC | 6 cut(s) | 817, 1088, 1373, 1834, 2000, 2168 |
| LweI | GCATC | 1 cut(s) | 1954 |
| MaeII | ACGT | 1 cut(s) | 1047 |
| MaeIII | GTNAC | 4 cut(s) | 425, 562, 661, 1270 |
| MalI | GATC | 1 cut(s) | 752 |
| MboI | GATC | 1 cut(s) | 750 |
| MlsI | TGGCCA | 1 cut(s) | 1425 |
| MluNI | TGGCCA | 1 cut(s) | 1425 |
| Mly113I | GGCGCC | 1 cut(s) | 1985 |
| MlyI | GAGTC | 3 cut(s) | 7, 14, 1094 |
| Mox20I | TGGCCA | 1 cut(s) | 1425 |
| MscI | TGGCCA | 1 cut(s) | 1425 |
| MseI | TTAA | 9 cut(s) | 225, 317, 540, 722, 813, 1245, 1349, 1644, 1704 |
| MslI | CAYNNNNRTG | 1 cut(s) | 735 |
| Msp20I | TGGCCA | 1 cut(s) | 1425 |
| MspA1I | CMGCKG | 1 cut(s) | 1079 |
| MspCI | CTTAAG | 1 cut(s) | 1244 |
| MspI | CCGG | 2 cut(s) | 19, 35 |
| MspR9I | CCNGG | 1 cut(s) | 755 |
| Mva1269I | GAATGC | 5 cut(s) | 379, 705, 972, 1964, 2060 |
| MvaI | CCWGG | 1 cut(s) | 755 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 82, 969, 1132, 1844, 2165 |
| NarI | GGCGCC | 1 cut(s) | 1985 |
| NdeII | GATC | 1 cut(s) | 750 |
| NlaIV | GGNNCC | 2 cut(s) | 439, 1986 |
| NmuCI | GTSAC | 3 cut(s) | 425, 661, 1270 |
| NsbI | TGCGCA | 1 cut(s) | 1390 |
| NspI | RCATGY | 4 cut(s) | 85, 500, 518, 839 |
| PagI | TCATGA | 1 cut(s) | 394 |
| PciI | ACATGT | 2 cut(s) | 496, 514 |
| PctI | GAATGC | 5 cut(s) | 379, 705, 972, 1964, 2060 |
| PfeI | GAWTC | 6 cut(s) | 391, 535, 765, 881, 1138, 1412 |
| PflFI | GACNNNGTC | 2 cut(s) | 667, 1610 |
| PkrI | GCNGC | 6 cut(s) | 807, 1078, 1388, 1849, 2015, 2158 |
| PleI | GAGTC | 3 cut(s) | 7, 13, 1094 |
| PluTI | GGCGCC | 1 cut(s) | 1988 |
| PpsI | GAGTC | 3 cut(s) | 7, 13, 1094 |
| PscI | ACATGT | 2 cut(s) | 496, 514 |
| Psp6I | CCWGG | 1 cut(s) | 753 |
| PspEI | GGTNACC | 1 cut(s) | 1270 |
| PspGI | CCWGG | 1 cut(s) | 753 |
| PspN4I | GGNNCC | 2 cut(s) | 439, 1986 |
| PspPI | GGNCC | 1 cut(s) | 1612 |
| PstNI | CAGNNNCTG | 1 cut(s) | 97 |
| PsyI | GACNNNGTC | 2 cut(s) | 667, 1610 |
| PvuII | CAGCTG | 1 cut(s) | 1079 |
| RsaI | GTAC | 2 cut(s) | 439, 1584 |
| RsaNI | GTAC | 2 cut(s) | 438, 1583 |
| RseI | CAYNNNNRTG | 1 cut(s) | 735 |
| SaqAI | TTAA | 9 cut(s) | 225, 317, 540, 722, 813, 1245, 1349, 1644, 1704 |
| SatI | GCNGC | 6 cut(s) | 806, 1077, 1387, 1848, 2014, 2157 |
| Sau3AI | GATC | 1 cut(s) | 750 |
| Sau96I | GGNCC | 1 cut(s) | 1612 |
| ScaI | AGTACT | 1 cut(s) | 1584 |
| SchI | GAGTC | 3 cut(s) | 7, 14, 1094 |
| ScrFI | CCNGG | 1 cut(s) | 755 |
| SfaNI | GCATC | 1 cut(s) | 1954 |
| SfcI | CTRYAG | 1 cut(s) | 1406 |
| SfoI | GGCGCC | 1 cut(s) | 1986 |
| SinI | GGWCC | 1 cut(s) | 1612 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 735 |
| SmlI | CTYRAG | 4 cut(s) | 652, 1102, 1244, 1979 |
| SmoI | CTYRAG | 4 cut(s) | 652, 1102, 1244, 1979 |
| SsiI | CCGC | 3 cut(s) | 1742, 1999, 2168 |
| SspDI | GGCGCC | 1 cut(s) | 1984 |
| SspI | AATATT | 4 cut(s) | 321, 863, 1968, 2148 |
| StyD4I | CCNGG | 1 cut(s) | 753 |
| TaaI | ACNGT | 2 cut(s) | 48, 163 |
| TaiI | ACGT | 1 cut(s) | 1050 |
| TaqI | TCGA | 1 cut(s) | 533 |
| TatI | WGTACW | 1 cut(s) | 1582 |
| TfiI | GAWTC | 6 cut(s) | 391, 535, 765, 881, 1138, 1412 |
| Tru1I | TTAA | 9 cut(s) | 225, 317, 540, 722, 813, 1245, 1349, 1644, 1704 |
| Tru9I | TTAA | 9 cut(s) | 225, 317, 540, 722, 813, 1245, 1349, 1644, 1704 |
| TscAI | CASTG | 2 cut(s) | 175, 920 |
| TseFI | GTSAC | 3 cut(s) | 425, 661, 1270 |
| TseI | GCWGC | 6 cut(s) | 805, 1076, 1386, 1847, 2013, 2156 |
| Tsp45I | GTSAC | 3 cut(s) | 425, 661, 1270 |
| TspGWI | ACGGA | 1 cut(s) | 1577 |
| TspRI | CASTG | 2 cut(s) | 175, 920 |
| Tth111I | GACNNNGTC | 2 cut(s) | 667, 1610 |
| Vha464I | CTTAAG | 1 cut(s) | 1244 |
| VpaK11BI | GGWCC | 1 cut(s) | 1612 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1366 |
| XbaI | TCTAGA | 1 cut(s) | 487 |
| XceI | RCATGY | 4 cut(s) | 85, 500, 518, 839 |
| XmiI | GTMKAC | 1 cut(s) | 935 |
| ZrmI | AGTACT | 1 cut(s) | 1584 |