FvH4_7g09880

ARABIDILLO 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0010465
Physical Location & Seq
Forward (+)
9402642 .. 9413121
10480 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g09880.t2

Sequence Viewer

Length: 2757 bp
ATGAGTCGTAGGGTGAGAAGGAAGGTGGGTAGGAAAGGGAAGGAGAAGGTGGTGTTGCCGACTTATCCTGAGATTGAGGAAGAAGTTTCGGGTTCTGTGTATAATGGGTTTGTTGATTGGACTGGTTTGCCTGATGACACTGTGATTCAGTTGTTTTCGTGTCTGAATGATCGCGACCGGGCAAGTTTAGCATCTACTTGCAAGACTTGGAGGGTTCTTGGGATTTCTCCTTGTTTGTGGACCTCTTTGGATCTTCGCGCGCACAAATGTAATGATGCAATGGCAACTTCACTTGCTTCGAGGTGTGTGAATCTTAAGAAGCTTAGGTTTCGTGGGGCAGAATCCGCCGATGCTATACTGCATCTTCAGGCAAGGGATTTACGTGAGATAAGTGGTGATTATTGCAGGAAAATAACTGATGCAACTCTTTCTGTGATTGTCGCACGACACGAGGCACTTGAAAGCCTGCAGCTTGGGCCAGATTTCTGTGAAAGGATCAGCAGTGATGCTATAAAAGCCATAGCTTTTTGCTGTCCTAAATTGAAGAAGCTTCGACTATCTGGAATTAGGGATGTTCATGCTGATGCTATTAATGCTCTAACTAAGCATTGCCCAAATTTGACTGATATTGGGTTCATAGACTGTCTGAACGTTGATGAGATGGCATTGGGAAATGTTGTGTCAGTTCGGTTCCTCTCTGTCGCAGGGACATCAAATATGAAATGGGGTGTGGTTTCACATCTTTGGCATAAGCTGCCTAACTTGACTGGTCTAGATGTTTCAAGAACTGATATTAGTTCTGCTGCTGTTTCGCGATTGTTGTCATCATCACAGAGCCTGAAGGTTTTATGTGCCTTGAATTGTCCTGAGCTTGAAGGAGGCACCAACTTTGCTCCCCGTAAATATAAAAGTAAATTGTTACTCGCCCTTTTTACAGATATTTTGAAAGAACTAGCTTTATTATTTGTCGATATTACAAAAAAAGGGAAGAATGTGTTTTTGGATTGGAGGAATTCAGTGAACAAGGATAAGAACTTGGATGACATTATGACTTGGCTTGAGTGGATTCTGTCTCATACTCTTTTGCGCATTGCTGAGAGCAATCAGCAAGGTTTGGATGCTTTTTGGCTCAAACAAGGTGCAACATTGTTGCTCAATTTAATGCAGAGCTCACAAGAGGATGTCCAGGAAAGGGCAGCTACTGGACTTGCAACTTTTGTTGTTATTGATGATGAGAATGCTAGCATAGACTGCGGGAGGGCCGAAGCTGTTATGCGAGATGGTGGAATACGCCTTCTCCTAAACCTAGCAAGATCTTGGCGAGAAGGACTTCAGTCAGAGGCTGCAAAGGCTATAGCAAATTTGTCTGTGAATGGTCAAGTTGCAAAAGCTGTTGCTGAAGAAGGAGGAATCGATATTCTGGCTGGTTTGGCTAGGTCTATGAATAGGCTTGTTGCTGAAGAGGCTGCTGGAGGACTATGGAATCTATCTGTTGGAGAAGAACACAAGGGTGCCATCGCTGAAGCTGGTGGTGTAAAAGCTTTAGTTGATCTTATATTCAAGTGGTCCTCTGGTGGTGATGGAGTTCTGGAACGTGCAGCTGGTGCACTGGCGAACTTGGCTGCCGATGACAAGTGTAGCACAGAGGTTGCAGTGGCAGGTGGTGTGCATGCTTTAGTGATGCTTGCTCGTAACTGCAAATTTGAGGGAGTGCAAGAGCAGGCTGCCCGTGCTTTGGCTAATTTAGCTGCTCATGGAGATAGTAATAGTAATAATGCTGCAGTGGGACAAGAGGCTGGTGCTCTTGAAGCACTTGTTCAGCTTACGCAATCTCCTCATGAAGGAGTCAGGCAAGAGGCAGCTGGCGCATTGTGGAATCTGTCATTTGATGACAGAAATCGAGAAGCAATTGCTGCAGCGGGTGGTGTTGAGGCCTTGGTTGCTCTTGCGCAAGGCTGCTCAAATGCCTCCCCAGGTCTTCAAGAAAGGGCTGCTGGTGCTCTTTGGGGATTGTCTGTCTCTGAAGCCAACAGTATTGCCATTGGACGAGAAGGAGGTGTTGTGCCTTTGATTGCTTTGGCACGCTCTGAAGCTGCAGATGTCCATGAAACAGCTGCAGGTGCTCTATGGAATCTTGCTTTTAACCCTGGTAATGCTCTCCGTATAGTTGAGGAAGGTGGTGTTCCTGCACTTGTTCATCTTTGTTCTTCGTCGGTGTCAAAAATGGCTCGCTTCATGGCTGCATTGGCGTTGGCGTACATGTTTGATGGAAGAATGGATGAATACGCCTTGGTAGGTATTTCTTCGGAAAGCATATCAAAGGGTGTGAGCTTAGATGGGGCTAGAAGGATGGCTCTGAAGCACATTGAGACATTCGTCCTCACATTTTCTGATCCACAGACATTTTCTGCTGCTGCTGCATCATTAGCGCTGGCAGCATTGGCACAAGTTACAGAAGGAGCTCGAATTCAAGAAGCAGGACATCTCAGATGCAGTGGGGCTGAAATTGGAAGATTTGTTACTATGCTACGAAATCCATCATCTGTCCTCAAGTCATGTGCTGCATTTGCTCTTCTCCAGTTTACCATTCCTGGTGGCCGGCATGCTATGCACCATGCAAGCCTTATGCAAAATGGAGGAGCAGCACGGGTTCTGCGGGCTGCAGCTGCTGCAGCAACTGCACCTCTTGAAGCCAAAATTTTTGCGAAAATCGTTCTTCGCAATCTTGAGCATCACCACATGGAACCATCACTATAG

Protein Analysis

919

Amino Acids

97.97

Weight (kDa)

6.54

Isoelectric Point (pI)

37.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 40 - 86 2e-09 F-box-like
F-box PF00646 40 - 80 5.1e-06 F-box domain
ARM_ARMC5 PF24768 495 - 756 2.6e-20 ARMC5
Arm PF00514 501 - 542 5.3e-06 Armadillo/beta-catenin-like repeat
Arm PF00514 544 - 584 2.4e-06 Armadillo/beta-catenin-like repeat
Arm PF00514 592 - 628 4.7e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 675 - 713 1.7e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1649, 2108
Acc16I TGCGCA 2 cut(s) 1088, 1950
Acc36I ACCTGC 2 cut(s) 1649, 2108
AccB1I GGYRCC 2 cut(s) 881, 1511
AccII CGCG 4 cut(s) 174, 258, 260, 814
AciI CCGC 4 cut(s) 345, 1254, 1919, 2656
AclI AACGTT 1 cut(s) 651
AclWI GGATC 3 cut(s) 258, 503, 2387
AcoI YGGCCR 1 cut(s) 2596
AcsI RAATTY 6 cut(s) 616, 1012, 1360, 1700, 2466, 2697
AcuI CTGAAG 9 cut(s) 350, 860, 1316, 1419, 1479, 1542, 2043, 2109, 2378
AfaI GTAC 1 cut(s) 2258
AfeI AGCGCT 1 cut(s) 2430
AfiI CCNNNNNNNGG 3 cut(s) 1192, 1735, 1841
AflII CTTAAG 1 cut(s) 314
AflIII ACRYGT 1 cut(s) 2259
AjnI CCWGG 4 cut(s) 1185, 1972, 2146, 2590
AjuI GAANNNNNNNTTGG 2 cut(s) 983, 1015
AleI CACNNNNGTG 1 cut(s) 1509
Alw21I GWGCWC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
Alw26I GTCTC 3 cut(s) 1077, 2023, 2363
Alw44I GTGCAC 1 cut(s) 1605
AlwI GGATC 3 cut(s) 258, 503, 2387
AlwNI CAGNNNCTG 5 cut(s) 838, 1202, 1343, 2669, 2678
Aor51HI AGCGCT 1 cut(s) 2430
AoxI GGCC 4 cut(s) 476, 1260, 1932, 2596
ApaLI GTGCAC 1 cut(s) 1605
ApoI RAATTY 6 cut(s) 616, 1012, 1360, 1700, 2466, 2697
AseI ATTAAT 1 cut(s) 591
Asp700I GAANNNNTTC 1 cut(s) 1329
AspLEI GCGC 6 cut(s) 260, 262, 1089, 1868, 1951, 2431
AspS9I GGNCC 4 cut(s) 240, 476, 1260, 1566
AsuC2I CCSGG 1 cut(s) 179
AsuHPI GGTGA 4 cut(s) 25, 407, 1589, 2726
AsuNHI GCTAGC 1 cut(s) 1241
AvaII GGWCC 2 cut(s) 240, 1566
BaeGI GKGCMC 1 cut(s) 1609
BanI GGYRCC 2 cut(s) 881, 1511
BanII GRGCYC 2 cut(s) 1172, 2464
BarI GAAGNNNNNNTAC 2 cut(s) 2503, 2535
BauI CACGAG 1 cut(s) 449
BbsI GAAGAC 1 cut(s) 1970
Bbv12I GWGCWC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
BccI CCATC 9 cut(s) 655, 1274, 1523, 1574, 2261, 2330, 2344, 2545, 2755
BciT130I CCWGG 4 cut(s) 1187, 1974, 2148, 2592
BcnI CCSGG 1 cut(s) 179
BcoDI GTCTC 3 cut(s) 1077, 2023, 2363
BfaI CTAG 6 cut(s) 773, 953, 1242, 1307, 1434, 2343
BfmI CTRYAG 9 cut(s) 467, 1353, 1779, 1914, 2094, 2115, 2661, 2670, 2753
BfoI RGCGCY 1 cut(s) 2432
BfrI CTTAAG 1 cut(s) 314
BfuAI ACCTGC 2 cut(s) 1649, 2108
BglII AGATCT 1 cut(s) 1313
Bme1390I CCNGG 5 cut(s) 179, 1187, 1974, 2148, 2592
Bme18I GGWCC 2 cut(s) 240, 1566
BmgT120I GGNCC 4 cut(s) 240, 476, 1260, 1566
BmiI GGNNCC 4 cut(s) 692, 883, 1513, 2745
BmrFI CCNGG 5 cut(s) 179, 1187, 1974, 2148, 2592
BmtI GCTAGC 1 cut(s) 1245
BoxI GACNNNNGTC 2 cut(s) 1333, 2375
BpiI GAAGAC 1 cut(s) 1970
BpmI CTGGAG 2 cut(s) 1491, 2561
Bpu10I CCTNAGC 2 cut(s) 323, 867
BpuEI CTTGAG 3 cut(s) 1079, 2534, 2747
BpuMI CCSGG 1 cut(s) 179
Bsa29I ATCGAT 1 cut(s) 1413
BsaAI YACGTR 1 cut(s) 383
BsaJI CCNNGG 4 cut(s) 1935, 1972, 2146, 2289
BsaXI ACNNNNNCTCC 6 cut(s) 1281, 1311, 1816, 1846, 2046, 2076
Bsc4I CCNNNNNNNGG 3 cut(s) 1192, 1735, 1841
Bse118I RCCGGY 1 cut(s) 2598
Bse1I ACTGG 5 cut(s) 127, 772, 1207, 1614, 2578
Bse3DI GCAATG 3 cut(s) 285, 607, 1089
BseBI CCWGG 4 cut(s) 1187, 1974, 2148, 2592
BseCI ATCGAT 1 cut(s) 1413
BseDI CCNNGG 4 cut(s) 1935, 1972, 2146, 2289
BseGI GGATG 6 cut(s) 577, 1045, 1123, 1186, 2284, 2355
BseLI CCNNNNNNNGG 3 cut(s) 1192, 1735, 1841
BseMI GCAATG 3 cut(s) 285, 607, 1089
BseMII CTCAG 4 cut(s) 60, 858, 1086, 2500
BseNI ACTGG 5 cut(s) 127, 772, 1207, 1614, 2578
BsePI GCGCGC 1 cut(s) 258
BseRI GAGGAG 2 cut(s) 1824, 2652
BseSI GKGCMC 1 cut(s) 1609
BsgI GTGCAG 3 cut(s) 1617, 2172, 2664
Bsh1236I CGCG 4 cut(s) 174, 258, 260, 814
Bsh1285I CGRYCG 1 cut(s) 178
BshFI GGCC 4 cut(s) 478, 1262, 1934, 2598
BshNI GGYRCC 2 cut(s) 881, 1511
BshVI ATCGAT 1 cut(s) 1413
BsiEI CGRYCG 1 cut(s) 178
BsiHKAI GWGCWC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
BsiSI CCGG 2 cut(s) 178, 2599
BslFI GGGAC 2 cut(s) 721, 1800
BslI CCNNNNNNNGG 3 cut(s) 1192, 1735, 1841
BsmAI GTCTC 3 cut(s) 1077, 2023, 2363
BsmFI GGGAC 2 cut(s) 721, 1800
BsmI GAATGC 1 cut(s) 1243
BsnI GGCC 4 cut(s) 478, 1262, 1934, 2598
Bsp1286I GDGCHC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
Bsp143I GATC 6 cut(s) 169, 250, 495, 1313, 1549, 2392
Bsp68I TCGCGA 2 cut(s) 174, 814
BspACI CCGC 4 cut(s) 345, 1254, 1919, 2656
BspANI GGCC 4 cut(s) 478, 1262, 1934, 2598
BspCNI CTCAG 4 cut(s) 61, 859, 1087, 2499
BspDI ATCGAT 1 cut(s) 1413
BspFNI CGCG 4 cut(s) 174, 258, 260, 814
BspHI TCATGA 1 cut(s) 1837
BspLI GGNNCC 4 cut(s) 692, 883, 1513, 2745
BspMAI CTGCAG 7 cut(s) 471, 1783, 1918, 2098, 2119, 2665, 2674
BspMI ACCTGC 2 cut(s) 1649, 2108
BspOI GCTAGC 1 cut(s) 1245
BspPI GGATC 3 cut(s) 258, 503, 2387
BspQI GCTCTTC 1 cut(s) 2577
BspT107I GGYRCC 2 cut(s) 881, 1511
BspTI CTTAAG 1 cut(s) 314
BsrDI GCAATG 3 cut(s) 285, 607, 1089
BsrFI RCCGGY 1 cut(s) 2598
BsrI ACTGG 5 cut(s) 127, 772, 1207, 1614, 2578
BssAI RCCGGY 1 cut(s) 2598
BssECI CCNNGG 4 cut(s) 1935, 1972, 2146, 2289
BssHII GCGCGC 1 cut(s) 258
BssMI GATC 6 cut(s) 169, 250, 495, 1313, 1549, 2392
BssSI CACGAG 1 cut(s) 449
BssT1I CCWWGG 2 cut(s) 1935, 2289
Bst2BI CACGAG 1 cut(s) 449
Bst2UI CCWGG 4 cut(s) 1187, 1974, 2148, 2592
Bst4CI ACNGT 3 cut(s) 142, 644, 2033
Bst6I CTCTTC 2 cut(s) 1455, 2577
BstAFI CTTAAG 1 cut(s) 314
BstAPI GCANNNNNTGC 7 cut(s) 754, 1251, 1604, 1913, 2608, 2669, 2678
BstBAI YACGTR 1 cut(s) 383
BstDEI CTNAG 7 cut(s) 69, 323, 603, 867, 1095, 2332, 2486
BstENI CCTNNNNNAGG 1 cut(s) 1839
BstF5I GGATG 6 cut(s) 577, 1045, 1123, 1186, 2284, 2355
BstFNI CGCG 4 cut(s) 174, 258, 260, 814
BstH2I RGCGCY 1 cut(s) 2432
BstHHI GCGC 6 cut(s) 260, 262, 1089, 1868, 1951, 2431
BstKTI GATC 6 cut(s) 172, 253, 498, 1316, 1552, 2395
BstMAI GTCTC 3 cut(s) 1077, 2023, 2363
BstMBI GATC 6 cut(s) 169, 250, 495, 1313, 1549, 2392
BstMCI CGRYCG 1 cut(s) 178
BstNI CCWGG 4 cut(s) 1187, 1974, 2148, 2592
BstNSI RCATGY 3 cut(s) 1673, 2263, 2606
BstPAI GACNNNNGTC 2 cut(s) 1333, 2375
BstSCI CCNGG 5 cut(s) 177, 1185, 1972, 2146, 2590
BstSFI CTRYAG 9 cut(s) 467, 1353, 1779, 1914, 2094, 2115, 2661, 2670, 2753
BstSLI GKGCMC 1 cut(s) 1609
BstUI CGCG 4 cut(s) 174, 258, 260, 814
BstV2I GAAGAC 1 cut(s) 1970
BstX2I RGATCY 2 cut(s) 250, 1313
BstYI RGATCY 2 cut(s) 250, 1313
Bsu15I ATCGAT 1 cut(s) 1413
BsuRI GGCC 4 cut(s) 478, 1262, 1934, 2598
BsuTUI ATCGAT 1 cut(s) 1413
BtgZI GCGATG 1 cut(s) 1501
BtsCI GGATG 6 cut(s) 577, 1045, 1123, 1186, 2284, 2355
BtsI GCAGTG 4 cut(s) 508, 1659, 1788, 2500
BtsIMutI CAGTG 7 cut(s) 138, 508, 1023, 1607, 1659, 1788, 2500
BtuMI TCGCGA 2 cut(s) 174, 814
BveI ACCTGC 2 cut(s) 1649, 2108
CaiI CAGNNNCTG 5 cut(s) 838, 1202, 1343, 2669, 2678
CciI TCATGA 1 cut(s) 1837
CfoI GCGC 6 cut(s) 260, 262, 1089, 1868, 1951, 2431
Cfr10I RCCGGY 1 cut(s) 2598
Cfr13I GGNCC 4 cut(s) 240, 476, 1260, 1566
ClaI ATCGAT 1 cut(s) 1413
Csp6I GTAC 1 cut(s) 2257
CviQI GTAC 1 cut(s) 2257
DdeI CTNAG 7 cut(s) 69, 323, 603, 867, 1095, 2332, 2486
DpnI GATC 6 cut(s) 171, 252, 497, 1315, 1551, 2394
DpnII GATC 6 cut(s) 169, 250, 495, 1313, 1549, 2392
EaeI YGGCCR 1 cut(s) 2596
Eam1104I CTCTTC 2 cut(s) 1455, 2577
EarI CTCTTC 2 cut(s) 1455, 2577
EciI GGCGGA 1 cut(s) 334
Ecl136II GAGCTC 2 cut(s) 1170, 2462
Eco130I CCWWGG 2 cut(s) 1935, 2289
Eco147I AGGCCT 1 cut(s) 1934
Eco24I GRGCYC 2 cut(s) 1172, 2464
Eco47I GGWCC 2 cut(s) 240, 1566
Eco47III AGCGCT 1 cut(s) 2430
Eco53kI GAGCTC 2 cut(s) 1170, 2462
Eco57I CTGAAG 9 cut(s) 350, 860, 1316, 1419, 1479, 1542, 2043, 2109, 2378
EcoICRI GAGCTC 2 cut(s) 1170, 2462
EcoNI CCTNNNNNAGG 1 cut(s) 1839
EcoRI GAATTC 2 cut(s) 1012, 2466
EcoRII CCWGG 4 cut(s) 1185, 1972, 2146, 2590
EcoT14I CCWWGG 2 cut(s) 1935, 2289
EcoT38I GRGCYC 2 cut(s) 1172, 2464
ErhI CCWWGG 2 cut(s) 1935, 2289
FaqI GGGAC 2 cut(s) 721, 1800
FauI CCCGC 3 cut(s) 1247, 1912, 2649
FokI GGATG 6 cut(s) 584, 1052, 1130, 1193, 2291, 2362
FriOI GRGCYC 2 cut(s) 1172, 2464
FspBI CTAG 6 cut(s) 773, 953, 1242, 1307, 1434, 2343
FspI TGCGCA 2 cut(s) 1088, 1950
GlaI GCGC 6 cut(s) 259, 261, 1088, 1867, 1950, 2430
GsuI CTGGAG 2 cut(s) 1491, 2561
HaeII RGCGCY 1 cut(s) 2432
HaeIII GGCC 4 cut(s) 478, 1262, 1934, 2598
HapII CCGG 2 cut(s) 178, 2599
HhaI GCGC 6 cut(s) 260, 262, 1089, 1868, 1951, 2431
Hin6I GCGC 6 cut(s) 258, 260, 1087, 1866, 1949, 2429
HinP1I GCGC 6 cut(s) 258, 260, 1087, 1866, 1949, 2429
HindIII AAGCTT 3 cut(s) 320, 548, 1539
HpaII CCGG 2 cut(s) 178, 2599
HphI GGTGA 4 cut(s) 25, 407, 1589, 2726
Hpy166II GTNNAC 4 cut(s) 240, 1021, 1607, 2583
Hpy188I TCNGA 9 cut(s) 165, 648, 1339, 2023, 2089, 2308, 2358, 2392, 2489
Hpy8I GTNNAC 4 cut(s) 240, 1021, 1607, 2583
Hpy99I CGWCG 1 cut(s) 2215
HpyCH4III ACNGT 3 cut(s) 142, 644, 2033
HpyCH4IV ACGT 3 cut(s) 382, 651, 1594
HpyF3I CTNAG 7 cut(s) 69, 323, 603, 867, 1095, 2332, 2486
HpySE526I ACGT 3 cut(s) 382, 651, 1594
HspAI GCGC 6 cut(s) 258, 260, 1087, 1866, 1949, 2429
KroI GCCGGC 1 cut(s) 2598
KroNI GCCGGC 1 cut(s) 2600
Kzo9I GATC 6 cut(s) 169, 250, 495, 1313, 1549, 2392
LguI GCTCTTC 1 cut(s) 2577
LmnI GCTCC 3 cut(s) 898, 2459, 2639
MaeI CTAG 6 cut(s) 773, 953, 1242, 1307, 1434, 2343
MaeII ACGT 3 cut(s) 382, 651, 1594
MaeIII GTNAC 4 cut(s) 918, 1691, 2449, 2518
MalI GATC 6 cut(s) 171, 252, 497, 1315, 1551, 2394
MboI GATC 6 cut(s) 169, 250, 495, 1313, 1549, 2392
MfeI CAATTG 1 cut(s) 1908
MflI RGATCY 2 cut(s) 250, 1313
MhlI GDGCHC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
MlyI GAGTC 2 cut(s) 13, 1854
MmeI TCCRAC 1 cut(s) 1474
MroNI GCCGGC 1 cut(s) 2598
MroXI GAANNNNTTC 1 cut(s) 1329
MseI TTAA 4 cut(s) 315, 591, 1160, 2142
MslI CAYNNNNRTG 2 cut(s) 582, 1509
MspA1I CMGCKG 5 cut(s) 1601, 1862, 1919, 2114, 2666
MspCI CTTAAG 1 cut(s) 314
MspI CCGG 2 cut(s) 178, 2599
MspR9I CCNGG 5 cut(s) 179, 1187, 1974, 2148, 2592
MunI CAATTG 1 cut(s) 1908
Mva1269I GAATGC 1 cut(s) 1243
MvaI CCWGG 4 cut(s) 1187, 1974, 2148, 2592
MvnI CGCG 4 cut(s) 174, 258, 260, 814
NaeI GCCGGC 1 cut(s) 2600
NciI CCSGG 1 cut(s) 179
NdeII GATC 6 cut(s) 169, 250, 495, 1313, 1549, 2392
NgoMIV GCCGGC 1 cut(s) 2598
NheI GCTAGC 1 cut(s) 1241
NlaIV GGNNCC 4 cut(s) 692, 883, 1513, 2745
NruI TCGCGA 2 cut(s) 174, 814
NsbI TGCGCA 2 cut(s) 1088, 1950
NspI RCATGY 3 cut(s) 1673, 2263, 2606
OliI CACNNNNGTG 1 cut(s) 1509
PaeI GCATGC 2 cut(s) 1673, 2606
PagI TCATGA 1 cut(s) 1837
PaqCI CACCTGC 2 cut(s) 1649, 2108
PauI GCGCGC 1 cut(s) 258
PceI AGGCCT 1 cut(s) 1934
PciI ACATGT 1 cut(s) 2259
PciSI GCTCTTC 1 cut(s) 2577
PcsI WCGNNNNNNNCGW 1 cut(s) 447
PctI GAATGC 1 cut(s) 1243
PdiI GCCGGC 1 cut(s) 2600
PdmI GAANNNNTTC 1 cut(s) 1329
PfeI GAWTC 8 cut(s) 145, 310, 341, 1066, 1410, 1483, 1876, 2131
PfoI TCCNGGA 1 cut(s) 1185
PleI GAGTC 2 cut(s) 12, 1853
PpsI GAGTC 2 cut(s) 12, 1853
Ppu21I YACGTR 1 cut(s) 383
PscI ACATGT 1 cut(s) 2259
PshAI GACNNNNGTC 2 cut(s) 1333, 2375
PshBI ATTAAT 1 cut(s) 591
Psp124BI GAGCTC 2 cut(s) 1172, 2464
Psp1406I AACGTT 1 cut(s) 651
Psp6I CCWGG 4 cut(s) 1185, 1972, 2146, 2590
PspGI CCWGG 4 cut(s) 1185, 1972, 2146, 2590
PspN4I GGNNCC 4 cut(s) 692, 883, 1513, 2745
PspPI GGNCC 4 cut(s) 240, 476, 1260, 1566
PstI CTGCAG 7 cut(s) 471, 1783, 1918, 2098, 2119, 2665, 2674
PstNI CAGNNNCTG 5 cut(s) 838, 1202, 1343, 2669, 2678
PsuI RGATCY 2 cut(s) 250, 1313
PteI GCGCGC 1 cut(s) 258
PvuII CAGCTG 4 cut(s) 1601, 1862, 2114, 2666
RruI TCGCGA 2 cut(s) 174, 814
RsaI GTAC 1 cut(s) 2258
RsaNI GTAC 1 cut(s) 2257
RseI CAYNNNNRTG 2 cut(s) 582, 1509
SacI GAGCTC 2 cut(s) 1172, 2464
SapI GCTCTTC 1 cut(s) 2577
SaqAI TTAA 4 cut(s) 315, 591, 1160, 2142
Sau3AI GATC 6 cut(s) 169, 250, 495, 1313, 1549, 2392
Sau96I GGNCC 4 cut(s) 240, 476, 1260, 1566
SchI GAGTC 2 cut(s) 13, 1854
ScrFI CCNGG 5 cut(s) 179, 1187, 1974, 2148, 2592
SduI GDGCHC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
SfcI CTRYAG 9 cut(s) 467, 1353, 1779, 1914, 2094, 2115, 2661, 2670, 2753
SinI GGWCC 2 cut(s) 240, 1566
SmiMI CAYNNNNRTG 2 cut(s) 582, 1509
SmlI CTYRAG 4 cut(s) 314, 1058, 2549, 2726
SmoI CTYRAG 4 cut(s) 314, 1058, 2549, 2726
SphI GCATGC 2 cut(s) 1673, 2606
SseBI AGGCCT 1 cut(s) 1934
SsiI CCGC 4 cut(s) 345, 1254, 1919, 2656
SspMI CTAG 6 cut(s) 773, 953, 1242, 1307, 1434, 2343
SstI GAGCTC 2 cut(s) 1172, 2464
StuI AGGCCT 1 cut(s) 1934
StyD4I CCNGG 5 cut(s) 177, 1185, 1972, 2146, 2590
StyI CCWWGG 2 cut(s) 1935, 2289
TaaI ACNGT 3 cut(s) 142, 644, 2033
TaiI ACGT 3 cut(s) 385, 654, 1597
TaqI TCGA 6 cut(s) 299, 553, 969, 1413, 1900, 2464
TfiI GAWTC 8 cut(s) 145, 310, 341, 1066, 1410, 1483, 1876, 2131
Tru1I TTAA 4 cut(s) 315, 591, 1160, 2142
Tru9I TTAA 4 cut(s) 315, 591, 1160, 2142
TscAI CASTG 7 cut(s) 145, 508, 1023, 1614, 1659, 1788, 2500
TspDTI ATGAA 9 cut(s) 566, 625, 734, 1457, 1854, 2121, 2186, 2224, 2295
TspGWI ACGGA 1 cut(s) 2150
TspRI CASTG 7 cut(s) 145, 508, 1023, 1614, 1659, 1788, 2500
Vha464I CTTAAG 1 cut(s) 314
VneI GTGCAC 1 cut(s) 1605
VpaK11BI GGWCC 2 cut(s) 240, 1566
VspI ATTAAT 1 cut(s) 591
XagI CCTNNNNNAGG 1 cut(s) 1839
XapI RAATTY 6 cut(s) 616, 1012, 1360, 1700, 2466, 2697
XbaI TCTAGA 1 cut(s) 772
XceI RCATGY 3 cut(s) 1673, 2263, 2606
XmnI GAANNNNTTC 1 cut(s) 1329
XspI CTAG 6 cut(s) 773, 953, 1242, 1307, 1434, 2343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.