Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010465

Physical Location & Seq

Genomic Coordinates Forward (+)

18509171 .. 18520635

Gene Structure 11465 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G127900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2757 bp

ATGAGTCGTAGGGTGCGGCGGAAGGTGGCTAGGAAGGGGAAGGAGAAGGTGGTTTTGCCTTGTTATCCAGAAATTGAGGAAGAAGTTTCAGGTTCAGTGCAAAATTGGATTGTTGATTGGACTAGTTTGCCAGATGATACAGTAATCCAGTTGTTTTCGTGTCTGAACTATCGTGATCGGGCAAGCTTATCATCAACTTGCAAAACATGGAGAGTTCTTGGAATTTCTCCGTGTTTGTGGACCTCTTTGGATCTTAGGGCACACAAATGCAATGATGCCATGGCAGCTTCACTTGCTGCAAGATGTGTGAATCTTCAGAAGCTTAGGTTTCGGGGAGCAGAATCTGCTGATGCAATATTGCATCTTCAGGCCAGGAATTTACGTGAAATAAGTGGTGATTACTGCAGAAAAATAACTGATGCTACACTTTCTGTGATTGTGGCTCGGCACGAGGCACTTGAAAGCCTCCAGCTTGGGCCAGATTTCTGTGAAAGGATCAGCAGTGATGCTATAAAAGCAATAGCTATTTGCTGTCCTAAATTGAAAAAGCTTCGACTTTCGGGAATTAGGGATGTTCATGCTGATGCTATTATTGCTTTAACTAAGCATTGTCAAAATTTGACTGATATCGGGTTCATAGACTGTCTGAACATTGACGAGATGGCATTGGGAAATGTTTTATCAGTTCGTTTTCTCTCTGTAGCAGGGACGTCAAATATGAAATGGGGTGTGGTTTCACATCTTTGGCATAAGTTGCCTAACTTGACTGGGCTAGATGTTTCAAGAACTGATATTGGTTCGGCTGCTGTTTCACGGTTATTATCATCATCACAGAGCTTGAAGGTTTTATGTGCCTTGAATTGTCCTGTGCTTGAAGAAGACACCAACTTTGCTTCTCGTAAATATAAAAATAAATTGTTACTTGCCTGCTTTACAGAAATTATGGAAGAAATAGCTTTTTTATTAGTCGACATTACAAAGAAAGGGAAGAATGTGTTTTTGGATTGGAGGAATTCAAAGAACAAGGATAAGAACTTGGATGACATAATGACTTGGATTGAGTGGATTCTCTCTCATACTCTTTTGCGCATTGCCGAGAGCAATCAACAGGGTTTAGATGATTTTTGGCCCAAGCAAGGCGCATCATTGTTGCTCAATTTAATGCAAAGCTCACAAGAGGATGTTCAAGAAAGGGCAGCTACAGGACTTGCAACTTTTGTTGTTATTGATGATGAAAATGCTAGCATAGATTGCAGGAGGGCTGAAGCGGTTATGCGGGATGGTGGCATACGCCTTCTCCTAAACCTAGCAAAATCTTGGAGGGAAGGGCTCCAGTCAGAGGCTGCTAAGGCTATAGCAAACTTGTCTGTTAATGCCAATGTTGCAAAAGCTGTTGCTGAGGAAGGAGGAATCAATATTCTCGCTGGTTTGGCAAGGTCTATGAACAGGCTGGTTGCAGAAGAGGCTGCTGGAGGACTCTGGAATCTTTCTGTTGGAGAAGAGCACAAGGGTGCCATTGCGGAGGCCGGTGGAGTAAAAGCTTTAGTTGATCTTATCTTCAAATGGTCCTCTGGTGGTGATGGAGTTCTGGAACGTGCAGCTGGTGCACTGGCGAATTTAGCTGCTGATGACAAGTGTAGCACAGAGGTTGCTGTGGCAGGTGGTGTGCAGGCTTTGGTGATGCTTGCTCGTAACTGCAAGTTTGAGGGAGTGCAAGAGCAGGCTGCCCGTGCCTTGGCGAATTTGGCTGCTCATGGAGATAGTAATAGTAATAATGCTGCAGTTGGACAAGAGGCAGGTGCTCTTGAAGCACTAGTTCAGCTTACACAATCTCCTCATGAAGGTGTCAGGCAAGAGGCAGCTGGTGCATTGTGGAATCTATCGTTCGATGACAGAAACCGAGAAGCAATTGCTGCAGCTGGTGGTGTTGAGGCCTTGGTTGCTCTTGCACAAGGCTGCTCAAACGCCTCCCCAGGTCTTCAAGAAAGGGCTGCTGGTGCTCTTTGGGGATTGTCAGTGTCAGAAGCCAATAGCATTGCCATTGGACGGGAAGGAGGTGTTGTGCCTTTGATTGCATTGGCACGTTCTGAAGCTGCAGATGTCCATGAAACAGCTGCAGGTGCTCTTTGGAATCTTGCTTTTAACCCTGGTAATGCTCTCCGTATTGTGGAAGAAGGAGGTGTTCCTGCTCTTGTTAATCTTTGTTCTTCATCGGTGTCAAAAATGGCTCGCTTCATGGCTGCATTGGCATTGGCGTACATGTTTGATGGCAGAATGGATGAATTTGCCTTGATAGGGACTTCATCAGAAAGCATCTCAAAGAGTGTGAGCTTAGATGGCTCTAGAAGGATGGCTCTTAAGCACATTGAGGCCTTTGTCCTCACATTTTCTGATCAACAAACGTTTTCTGCTGCTGCAGCATCATCAGCCCCTGCAGCATTGGCACAAGTGACCGAAGGTGCTCGTATTCAAGAAGCAGGACATCTGAGATGCAGCGGGGCTGAAATTGGAAGATTTGTTACCATGCTGCGGAATCCATCATCTGTTCTCAAGGCATGTGCTGCATTTGCTCTTCTTCAGTTTACCATTCCTGGTGGCCGGCATGCCATGCACCATGCCAGCCTTATGCAGAATGCAGGAGCAGCACGTGTTCTGCGGGCTGCAGCTGCTGCGGCAACTGCTCCGCTTGAAGCCAAAATCTTTGCTAGAATTGTGCTTCGCAATCTTGAGCATCACCATATAGAACCATCACTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0007275 GO:0008134 GO:0008150 GO:0009791 GO:0022622 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0090696 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm F-box-like

Protein Analysis

919

Amino Acids

98.31

Weight (kDa)

6.5

Isoelectric Point (pI)

43.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010465)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44900 AT2G44900
fragaria_vesca	FvH4_7g09880 FvH4_7g09880
malus_domestica	MD02G1216100.v1.1 MD07G1104300.v1.1
prunus_persica	Prupe.2G127900_v2.0.a1 Prupe.2G127900_v2.0.a1 Prupe.2G127900_v2.0.a1
pyrus_communis	pycom02g17800 pycom07g08930
rosa_chinensis	RchiOBHm_Chr1g0347431
rosa_laevigata	RLG00000028748
rosa_multiflora	Rmu_sc0009756.1_g000008
rosa_roxburghii	Rroxscaffold_4G00307810
rosa_rugosa	Rorug01G0186800
rosa_samantha	Rh1AG204300 Rh1BG170000 Rh1CG189400 Rh1DG200400
rosa_wichuraiana	Rw1G017140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	1649, 1787, 2108
AatII	GACGTC	1 cut(s)	713
Acc16I	TGCGCA	1 cut(s)	1088
Acc36I	ACCTGC	3 cut(s)	1649, 1787, 2108
AccB1I	GGYRCC	1 cut(s)	1511
AccI	GTMKAC	1 cut(s)	969
AclI	AACGTT	1 cut(s)	2402
AclWI	GGATC	2 cut(s)	258, 503
AcoI	YGGCCR	1 cut(s)	2596
AcsI	RAATTY	7 cut(s)	222, 376, 616, 1012, 1615, 1741, 2282
AcuI	CTGAAG	5 cut(s)	299, 350, 1284, 2109, 2561
AcvI	CACGTG	1 cut(s)	2648
AcyI	GRCGYC	1 cut(s)	710
AfaI	GTAC	1 cut(s)	2258
AfiI	CCNNNNNNNGG	8 cut(s)	1136, 1339, 1735, 1841, 2046, 2167, 2295, 2529
AflII	CTTAAG	1 cut(s)	2357
AflIII	ACRYGT	2 cut(s)	2259, 2647
AhlI	ACTAGT	2 cut(s)	122, 1813
AjnI	CCWGG	4 cut(s)	371, 1972, 2146, 2590
AjuI	GAANNNNNNNTTGG	2 cut(s)	983, 1015
AleI	CACNNNNGTG	1 cut(s)	1509
Alw21I	GWGCWC	6 cut(s)	1506, 1609, 1804, 2002, 2125, 2464
Alw44I	GTGCAC	1 cut(s)	1605
AlwI	GGATC	2 cut(s)	258, 503
AlwNI	CAGNNNCTG	4 cut(s)	344, 1343, 2432, 2669
AoxI	GGCC	7 cut(s)	369, 476, 1127, 1524, 1932, 2370, 2596
ApaLI	GTGCAC	1 cut(s)	1605
ApoI	RAATTY	7 cut(s)	222, 376, 616, 1012, 1615, 1741, 2282
ArsI	GACNNNNNNTTYG	2 cut(s)	872, 904
AspLEI	GCGC	2 cut(s)	1089, 1142
AspS9I	GGNCC	4 cut(s)	240, 476, 1128, 1566
AsuHPI	GGTGA	4 cut(s)	407, 1589, 1690, 2726
AsuNHI	GCTAGC	1 cut(s)	1241
AvaII	GGWCC	2 cut(s)	240, 1566
BaeGI	GKGCMC	2 cut(s)	262, 1609
BanI	GGYRCC	1 cut(s)	1511
BanII	GRGCYC	1 cut(s)	1332
BarI	GAAGNNNNNNTAC	2 cut(s)	2503, 2535
BauI	CACGAG	1 cut(s)	449
BbrPI	CACGTG	1 cut(s)	2648
BbsI	GAAGAC	2 cut(s)	885, 1970
Bbv12I	GWGCWC	6 cut(s)	1506, 1609, 1804, 2002, 2125, 2464
BbvCI	CCTCAGC	1 cut(s)	1398
BccI	CCATC	8 cut(s)	655, 1274, 1574, 2261, 2330, 2344, 2545, 2755
BciT130I	CCWGG	4 cut(s)	373, 1974, 2148, 2592
BclI	TGATCA	1 cut(s)	2392
BcuI	ACTAGT	2 cut(s)	122, 1813
BfaI	CTAG	8 cut(s)	30, 123, 773, 1242, 1307, 1814, 2343, 2706
BfrI	CTTAAG	1 cut(s)	2357
BfuAI	ACCTGC	3 cut(s)	1649, 1787, 2108
Bme1390I	CCNGG	4 cut(s)	373, 1974, 2148, 2592
Bme18I	GGWCC	2 cut(s)	240, 1566
BmgT120I	GGNCC	4 cut(s)	240, 476, 1128, 1566
BmiI	GGNNCC	2 cut(s)	1331, 1513
BmrFI	CCNGG	4 cut(s)	373, 1974, 2148, 2592
BmrI	ACTGGG	1 cut(s)	777
BmtI	GCTAGC	1 cut(s)	1245
BmuI	ACTGGG	1 cut(s)	777
BpiI	GAAGAC	2 cut(s)	885, 1970
BpmI	CTGGAG	3 cut(s)	452, 1316, 1491
Bpu10I	CCTNAGC	3 cut(s)	323, 1347, 1398
BpuEI	CTTGAG	2 cut(s)	2534, 2747
BsaAI	YACGTR	2 cut(s)	383, 2648
BsaHI	GRCGYC	1 cut(s)	710
BsaJI	CCNNGG	5 cut(s)	279, 1734, 1935, 1972, 2146
BsaXI	ACNNNNNCTCC	6 cut(s)	1281, 1311, 1816, 1846, 2046, 2076
Bsc4I	CCNNNNNNNGG	8 cut(s)	1136, 1339, 1735, 1841, 2046, 2167, 2295, 2529
Bse118I	RCCGGY	2 cut(s)	1526, 2598
Bse1I	ACTGG	4 cut(s)	148, 772, 1333, 1614
Bse3DI	GCAATG	4 cut(s)	277, 1089, 1515, 2034
BseBI	CCWGG	4 cut(s)	373, 1974, 2148, 2592
BseDI	CCNNGG	5 cut(s)	279, 1734, 1935, 1972, 2146
BseGI	GGATG	6 cut(s)	577, 1045, 1186, 1285, 2284, 2355
BseLI	CCNNNNNNNGG	8 cut(s)	1136, 1339, 1735, 1841, 2046, 2167, 2295, 2529
BseMI	GCAATG	4 cut(s)	277, 1089, 1515, 2034
BseMII	CTCAG	2 cut(s)	1389, 2477
BseNI	ACTGG	4 cut(s)	148, 772, 1333, 1614
BseRI	GAGGAG	1 cut(s)	1824
BseSI	GKGCMC	2 cut(s)	262, 1609
BsgI	GTGCAG	2 cut(s)	1617, 1688
BshFI	GGCC	7 cut(s)	371, 478, 1129, 1526, 1934, 2372, 2598
BshNI	GGYRCC	1 cut(s)	1511
BsiHKAI	GWGCWC	6 cut(s)	1506, 1609, 1804, 2002, 2125, 2464
BsiSI	CCGG	2 cut(s)	1527, 2599
BslFI	GGGAC	2 cut(s)	721, 2311
BslI	CCNNNNNNNGG	8 cut(s)	1136, 1339, 1735, 1841, 2046, 2167, 2295, 2529
BsmFI	GGGAC	2 cut(s)	721, 2311
BsmI	GAATGC	1 cut(s)	2638
BsnI	GGCC	7 cut(s)	371, 478, 1129, 1526, 1934, 2372, 2598
Bsp1286I	GDGCHC	8 cut(s)	262, 1332, 1506, 1609, 1804, 2002, 2125, 2464
Bsp143I	GATC	5 cut(s)	175, 250, 495, 1549, 2392
Bsp19I	CCATGG	1 cut(s)	279
BspANI	GGCC	7 cut(s)	371, 478, 1129, 1526, 1934, 2372, 2598
BspCNI	CTCAG	2 cut(s)	1390, 2478
BspHI	TCATGA	1 cut(s)	1837
BspLI	GGNNCC	2 cut(s)	1331, 1513
BspMAI	CTGCAG	8 cut(s)	407, 1783, 1918, 2098, 2119, 2419, 2437, 2665
BspMI	ACCTGC	3 cut(s)	1649, 1787, 2108
BspOI	GCTAGC	1 cut(s)	1245
BspPI	GGATC	2 cut(s)	258, 503
BspQI	GCTCTTC	2 cut(s)	1494, 2577
BspT107I	GGYRCC	1 cut(s)	1511
BspTI	CTTAAG	1 cut(s)	2357
BsrDI	GCAATG	4 cut(s)	277, 1089, 1515, 2034
BsrFI	RCCGGY	2 cut(s)	1526, 2598
BsrI	ACTGG	4 cut(s)	148, 772, 1333, 1614
BssAI	RCCGGY	2 cut(s)	1526, 2598
BssECI	CCNNGG	5 cut(s)	279, 1734, 1935, 1972, 2146
BssMI	GATC	5 cut(s)	175, 250, 495, 1549, 2392
BssNI	GRCGYC	1 cut(s)	710
BssSI	CACGAG	1 cut(s)	449
BssT1I	CCWWGG	3 cut(s)	279, 1734, 1935
Bst2BI	CACGAG	1 cut(s)	449
Bst2UI	CCWGG	4 cut(s)	373, 1974, 2148, 2592
Bst4CI	ACNGT	3 cut(s)	142, 644, 816
Bst6I	CTCTTC	3 cut(s)	1455, 1494, 2577
BstACI	GRCGYC	1 cut(s)	710
BstAFI	CTTAAG	1 cut(s)	2357
BstAPI	GCANNNNNTGC	9 cut(s)	344, 754, 1251, 1604, 1865, 1913, 2561, 2608, 2669
BstBAI	YACGTR	2 cut(s)	383, 2648
BstDEI	CTNAG	7 cut(s)	254, 323, 603, 1347, 1398, 2332, 2486
BstDSI	CCRYGG	1 cut(s)	279
BstENI	CCTNNNNNAGG	1 cut(s)	1839
BstF5I	GGATG	6 cut(s)	577, 1045, 1186, 1285, 2284, 2355
BstHHI	GCGC	2 cut(s)	1089, 1142
BstKTI	GATC	5 cut(s)	178, 253, 498, 1552, 2395
BstMBI	GATC	5 cut(s)	175, 250, 495, 1549, 2392
BstNI	CCWGG	4 cut(s)	373, 1974, 2148, 2592
BstNSI	RCATGY	3 cut(s)	2263, 2559, 2606
BstSCI	CCNGG	4 cut(s)	371, 1972, 2146, 2590
BstSLI	GKGCMC	2 cut(s)	262, 1609
BstV2I	GAAGAC	2 cut(s)	885, 1970
BstX2I	RGATCY	1 cut(s)	250
BstYI	RGATCY	1 cut(s)	250
BsuRI	GGCC	7 cut(s)	371, 478, 1129, 1526, 1934, 2372, 2598
BtgI	CCRYGG	1 cut(s)	279
BtsCI	GGATG	6 cut(s)	577, 1045, 1186, 1285, 2284, 2355
BtsI	GCAGTG	1 cut(s)	508
BtsIMutI	CAGTG	4 cut(s)	102, 508, 1607, 2022
BveI	ACCTGC	3 cut(s)	1649, 1787, 2108
CaiI	CAGNNNCTG	4 cut(s)	344, 1343, 2432, 2669
CciI	TCATGA	1 cut(s)	1837
CfoI	GCGC	2 cut(s)	1089, 1142
Cfr10I	RCCGGY	2 cut(s)	1526, 2598
Cfr13I	GGNCC	4 cut(s)	240, 476, 1128, 1566
Csp6I	GTAC	1 cut(s)	2257
CviQI	GTAC	1 cut(s)	2257
DdeI	CTNAG	7 cut(s)	254, 323, 603, 1347, 1398, 2332, 2486
DpnI	GATC	5 cut(s)	177, 252, 497, 1551, 2394
DpnII	GATC	5 cut(s)	175, 250, 495, 1549, 2392
EaeI	YGGCCR	1 cut(s)	2596
Eam1104I	CTCTTC	3 cut(s)	1455, 1494, 2577
EarI	CTCTTC	3 cut(s)	1455, 1494, 2577
EciI	GGCGGA	1 cut(s)	34
Eco130I	CCWWGG	3 cut(s)	279, 1734, 1935
Eco147I	AGGCCT	2 cut(s)	1934, 2372
Eco24I	GRGCYC	1 cut(s)	1332
Eco32I	GATATC	1 cut(s)	628
Eco47I	GGWCC	2 cut(s)	240, 1566
Eco57I	CTGAAG	5 cut(s)	299, 350, 1284, 2109, 2561
Eco72I	CACGTG	1 cut(s)	2648
EcoNI	CCTNNNNNAGG	1 cut(s)	1839
EcoRI	GAATTC	1 cut(s)	1012
EcoRII	CCWGG	4 cut(s)	371, 1972, 2146, 2590
EcoRV	GATATC	1 cut(s)	628
EcoT14I	CCWWGG	3 cut(s)	279, 1734, 1935
EcoT38I	GRGCYC	1 cut(s)	1332
ErhI	CCWWGG	3 cut(s)	279, 1734, 1935
FaqI	GGGAC	2 cut(s)	721, 2311
FauI	CCCGC	3 cut(s)	1269, 2489, 2649
FbaI	TGATCA	1 cut(s)	2392
FblI	GTMKAC	1 cut(s)	969
FokI	GGATG	6 cut(s)	584, 1052, 1193, 1292, 2291, 2362
FriOI	GRGCYC	1 cut(s)	1332
FspBI	CTAG	8 cut(s)	30, 123, 773, 1242, 1307, 1814, 2343, 2706
FspI	TGCGCA	1 cut(s)	1088
GlaI	GCGC	2 cut(s)	1088, 1141
GsuI	CTGGAG	3 cut(s)	452, 1316, 1491
HaeIII	GGCC	7 cut(s)	371, 478, 1129, 1526, 1934, 2372, 2598
HapII	CCGG	2 cut(s)	1527, 2599
HhaI	GCGC	2 cut(s)	1089, 1142
Hin1I	GRCGYC	1 cut(s)	710
Hin6I	GCGC	2 cut(s)	1087, 1140
HinP1I	GCGC	2 cut(s)	1087, 1140
HincII	GTYRAC	1 cut(s)	970
HindII	GTYRAC	1 cut(s)	970
HindIII	AAGCTT	4 cut(s)	184, 320, 548, 1539
HpaII	CCGG	2 cut(s)	1527, 2599
HphI	GGTGA	4 cut(s)	407, 1589, 1690, 2726
Hpy166II	GTNNAC	4 cut(s)	240, 970, 1607, 2583
Hpy188I	TCNGA	9 cut(s)	165, 318, 648, 1339, 2023, 2089, 2308, 2392, 2487
Hpy8I	GTNNAC	4 cut(s)	240, 970, 1607, 2583
HpyCH4III	ACNGT	3 cut(s)	142, 644, 816
HpyCH4IV	ACGT	6 cut(s)	382, 710, 1594, 2083, 2402, 2647
HpyF3I	CTNAG	7 cut(s)	254, 323, 603, 1347, 1398, 2332, 2486
HpySE526I	ACGT	6 cut(s)	382, 710, 1594, 2083, 2402, 2647
Hsp92I	GRCGYC	1 cut(s)	710
HspAI	GCGC	2 cut(s)	1087, 1140
KroI	GCCGGC	1 cut(s)	2598
KroNI	GCCGGC	1 cut(s)	2600
Ksp22I	TGATCA	1 cut(s)	2392
Kzo9I	GATC	5 cut(s)	175, 250, 495, 1549, 2392
LguI	GCTCTTC	2 cut(s)	1494, 2577
LmnI	GCTCC	4 cut(s)	335, 1335, 2639, 2686
MaeI	CTAG	8 cut(s)	30, 123, 773, 1242, 1307, 1814, 2343, 2706
MaeII	ACGT	6 cut(s)	382, 710, 1594, 2083, 2402, 2647
MaeIII	GTNAC	4 cut(s)	918, 1691, 2449, 2518
MalI	GATC	5 cut(s)	177, 252, 497, 1551, 2394
MboI	GATC	5 cut(s)	175, 250, 495, 1549, 2392
MfeI	CAATTG	1 cut(s)	1908
MflI	RGATCY	1 cut(s)	250
MhlI	GDGCHC	8 cut(s)	262, 1332, 1506, 1609, 1804, 2002, 2125, 2464
MlyI	GAGTC	2 cut(s)	13, 1470
MmeI	TCCRAC	2 cut(s)	1474, 1765
MroNI	GCCGGC	1 cut(s)	2598
MseI	TTAA	6 cut(s)	599, 1160, 1371, 2142, 2196, 2358
MslI	CAYNNNNRTG	4 cut(s)	265, 582, 1509, 1842
MspA1I	CMGCKG	6 cut(s)	1601, 1862, 1919, 2114, 2496, 2666
MspCI	CTTAAG	1 cut(s)	2357
MspI	CCGG	2 cut(s)	1527, 2599
MspR9I	CCNGG	4 cut(s)	373, 1974, 2148, 2592
MunI	CAATTG	1 cut(s)	1908
Mva1269I	GAATGC	1 cut(s)	2638
MvaI	CCWGG	4 cut(s)	373, 1974, 2148, 2592
NaeI	GCCGGC	1 cut(s)	2600
NcoI	CCATGG	1 cut(s)	279
NdeII	GATC	5 cut(s)	175, 250, 495, 1549, 2392
NgoMIV	GCCGGC	1 cut(s)	2598
NheI	GCTAGC	1 cut(s)	1241
NlaIV	GGNNCC	2 cut(s)	1331, 1513
NmeAIII	GCCGAG	2 cut(s)	424, 1120
NmuCI	GTSAC	1 cut(s)	2449
NsbI	TGCGCA	1 cut(s)	1088
NspI	RCATGY	3 cut(s)	2263, 2559, 2606
OliI	CACNNNNGTG	1 cut(s)	1509
PaeI	GCATGC	1 cut(s)	2606
PagI	TCATGA	1 cut(s)	1837
PaqCI	CACCTGC	3 cut(s)	1649, 1787, 2108
PceI	AGGCCT	2 cut(s)	1934, 2372
PciI	ACATGT	1 cut(s)	2259
PciSI	GCTCTTC	2 cut(s)	1494, 2577
PctI	GAATGC	1 cut(s)	2638
PdiI	GCCGGC	1 cut(s)	2600
PfeI	GAWTC	8 cut(s)	310, 341, 1066, 1410, 1483, 1876, 2131, 2533
PleI	GAGTC	2 cut(s)	12, 1470
PmaCI	CACGTG	1 cut(s)	2648
PmlI	CACGTG	1 cut(s)	2648
PpsI	GAGTC	2 cut(s)	12, 1470
Ppu21I	YACGTR	2 cut(s)	383, 2648
PscI	ACATGT	1 cut(s)	2259
Psp1406I	AACGTT	1 cut(s)	2402
Psp6I	CCWGG	4 cut(s)	371, 1972, 2146, 2590
PspCI	CACGTG	1 cut(s)	2648
PspGI	CCWGG	4 cut(s)	371, 1972, 2146, 2590
PspN4I	GGNNCC	2 cut(s)	1331, 1513
PspPI	GGNCC	4 cut(s)	240, 476, 1128, 1566
PstI	CTGCAG	8 cut(s)	407, 1783, 1918, 2098, 2119, 2419, 2437, 2665
PstNI	CAGNNNCTG	4 cut(s)	344, 1343, 2432, 2669
PsuI	RGATCY	1 cut(s)	250
PvuII	CAGCTG	5 cut(s)	1601, 1862, 1919, 2114, 2666
RsaI	GTAC	1 cut(s)	2258
RsaNI	GTAC	1 cut(s)	2257
RseI	CAYNNNNRTG	4 cut(s)	265, 582, 1509, 1842
SalI	GTCGAC	1 cut(s)	968
SapI	GCTCTTC	2 cut(s)	1494, 2577
SaqAI	TTAA	6 cut(s)	599, 1160, 1371, 2142, 2196, 2358
Sau3AI	GATC	5 cut(s)	175, 250, 495, 1549, 2392
Sau96I	GGNCC	4 cut(s)	240, 476, 1128, 1566
SchI	GAGTC	2 cut(s)	13, 1470
ScrFI	CCNGG	4 cut(s)	373, 1974, 2148, 2592
SduI	GDGCHC	8 cut(s)	262, 1332, 1506, 1609, 1804, 2002, 2125, 2464
SinI	GGWCC	2 cut(s)	240, 1566
SmiMI	CAYNNNNRTG	4 cut(s)	265, 582, 1509, 1842
SmlI	CTYRAG	3 cut(s)	2357, 2549, 2726
SmoI	CTYRAG	3 cut(s)	2357, 2549, 2726
SpeI	ACTAGT	2 cut(s)	122, 1813
SphI	GCATGC	1 cut(s)	2606
SseBI	AGGCCT	2 cut(s)	1934, 2372
SspI	AATATT	2 cut(s)	357, 1417
SspMI	CTAG	8 cut(s)	30, 123, 773, 1242, 1307, 1814, 2343, 2706
StuI	AGGCCT	2 cut(s)	1934, 2372
StyD4I	CCNGG	4 cut(s)	371, 1972, 2146, 2590
StyI	CCWWGG	3 cut(s)	279, 1734, 1935
TaaI	ACNGT	3 cut(s)	142, 644, 816
TaiI	ACGT	6 cut(s)	385, 713, 1597, 2086, 2405, 2650
TaqI	TCGA	3 cut(s)	553, 969, 1887
TaqII	GACCGA	1 cut(s)	2468
TauI	GCSGC	2 cut(s)	19, 2675
TfiI	GAWTC	8 cut(s)	310, 341, 1066, 1410, 1483, 1876, 2131, 2533
Tru1I	TTAA	6 cut(s)	599, 1160, 1371, 2142, 2196, 2358
Tru9I	TTAA	6 cut(s)	599, 1160, 1371, 2142, 2196, 2358
TscAI	CASTG	4 cut(s)	102, 508, 1614, 2022
TseFI	GTSAC	1 cut(s)	2449
Tsp45I	GTSAC	1 cut(s)	2449
TspGWI	ACGGA	2 cut(s)	219, 2150
TspRI	CASTG	4 cut(s)	102, 508, 1614, 2022
Vha464I	CTTAAG	1 cut(s)	2357
VneI	GTGCAC	1 cut(s)	1605
VpaK11BI	GGWCC	2 cut(s)	240, 1566
XagI	CCTNNNNNAGG	1 cut(s)	1839
XapI	RAATTY	7 cut(s)	222, 376, 616, 1012, 1615, 1741, 2282
XbaI	TCTAGA	1 cut(s)	2342
XceI	RCATGY	3 cut(s)	2263, 2559, 2606
XmiI	GTMKAC	1 cut(s)	969
XspI	CTAG	8 cut(s)	30, 123, 773, 1242, 1307, 1814, 2343, 2706
ZraI	GACGTC	1 cut(s)	711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.