Rh1BG170000

ARABIDILLO 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0010465
Physical Location & Seq
Forward (+)
27138677 .. 27151612
12936 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG170000.1

Sequence Viewer

Length: 2757 bp
ATGAGTCGTAGGGTAAGGAGGAAGGTGGGTAGGAAAGGGAAGGAGAAGGTGGTTTTGCCGAGTTATCCTGAGATTGAGGATGAAGTTTTGGGTTCAGTGTACAATGGGTTTGTTGATTGGACTGGTTTGCCTGATGATACAGTAATTCAGTTGTTTTCGTGTCTGAATGATCGGGACCGGGCGAGTCTAGCATCAACTTGCAAGACATGGAGGGTTCTTGGGATTTCTCCTTGTTTGTGGACCTCTTTGGATCTTCGCGCGCACAAATGTAATGATGCCATGGCAACTTCACTTGCTTCGAGATGTGTGAATCTTAAGAAGCTTAGGTTTCGTGGGGCAGAATCCGCTGATGCTATACTGCATCTTCAGGCGAGGAATTTACGTGAGATAAGTGGCGATTACTGCAGAAAAATAACCGATGCAACTCTTTCTGTGATTGTGGCACGGCACGAGGCACTTGAAAGCCTCCAGCTTGGGCCAGATTTCTGTGAAAGGATCAGCAGTGATGCCATAAAAGCCGTAGCTTTTTGCTGTCCTAAATTGAAGAAGCTTCGACTATCTGGAATTAGGGATGTTCACGCTGATGCTGTTAATGCTCTAACTAAGCATTGCCCAAATTTGACTGATATTGGGTTCATAGACTGTCTGAACATTGACGAGATGGCATTGGGAAATGTTGTGTCCGTTCGTTTCCTCTCTGTCGCAGGGACATCAAATATGAAATGGGGTGCGGTTTCACATCTTTGGCATAAGCTGCCTAACTTGACTGGTCTCGATGTTTCAAGAACTGATATTAGTTCTGCTGCTGTTTCACGATTGTTGTCATCATCACAGAGCCTGAAGGTTTTATGCGCCTTGAATTGTCCCGAGCTTGAAGGAGACACCAACTTTGCTCCCCGTAAATATAAAAGTAAATTGTTACTTGCCCTTTTTACAGATATTTTGAAAGAACTAGCTTTATTATTTGTCGATATTACAAAGAAAGGGAAGAATGTGTTTTTGGATTGGAGGAACTCAATGAACAAGGATAAGAACTTGGATGACATTATGACGTGGCTTGAGTGGATCCTGTCTCATACTCTTTTGCGCATTGCCGAGAGCAATCAGCAAGGTTTGGATGCTTTTTGGCTCAAGCAAGGTGCAACATTGTTGCTCAATTTAATGCAGAGCTCACAAGAGGATGTCCAGGAAAGGGCAGCTACAGGACTTGCAACTTTTGTTGTTATTGATGATGAAAATGCTAGCATAGATTGTGGGAGGGCGGAAGCTGTTATGCGAGATGGTGGCATACGTCTTCTCCTAAACCTAGCAAGATCTTGGCGGGAAGGGCTTCAGTCAGAGGCTGCAAAGGCTATAGCAAATTTGTCTGTGAATGCCAATGTTGCAAAAGCTGTTGCTGAAGAAGGAGGAATCGATATTCTGGCTGGTTTGGCGAGGTCTATGAATAGGCTGGTTGCTGAAGAGGCTGCTGGAGGACTATGGAATCTTTCTGTTGGAGAAGAACACAAGGGTGCCATCGCTGAAGCCGGTGGTGTAAAAGCTTTAGTTGATCTTATATTCAAGTGGTCCTCTGGTGGTGATGGAGTTCTGGAACGTGCAGCTGGTGCACTGGCGAATTTGGCTGCTGATGACAAGTGTAGCACAGAGGTTGCAGTGGCAGGTGGTGTGCATGCTTTAGTGATGCTTGCTCGTAACTGCAAATTTGAGGGAGTGCAAGAGCAGGCTGCCCGTGCATTGGCTAATTTAGCTGCTCATGGAGATAGTAATAGTAATAATGCTGCAGTGGGACAAGAGGCTGGTGCTCTTGAAGCACTTGTTCAGCTTACACAATCTCCTCATGAAGGAGTCAGGCAAGAGGCAGCTGGCGCATTGTGGAATCTGTCATTTGATGACAGAAATCGAGAAGCAATTGCTGCAGCGGGTGGTGTCGAGGCCTTGGTTGCTCTTGCACAAGGCTGCTCAAATGCCTCCCCGGGTCTTCAAGAAAGGGCTGCTGGTGCTCTTTGGGGATTGTCAGTCTCTGAAGCCAATAGCATTGCCATTGGACGAGAAGGAGGTGTTGTGCCTTTGATTGCTTTGGCACGCTCTGAAGCTGCCGATGTCCATGAAACAGCTGCAGGTGCTCTTTGGAATCTTGCTTTTAATCCGGGTAATGCTCTCCGTATAGTAGAGGAAGGAGGTGTTCCTGCACTTGTTCATCTTTGTTCTTCATCGGTGTCAAAAATGGCTCGCTTCATGGCTGCATTGGCATTGGCGTACATGTTTGATGGCAGAATGGATGAATACGCCTTGGTAGGTATTTCTTCGGAAAGCATATCAAAGGGTGTGAGCTTAGATGGGGCTAGAAGGATGGCTCTGAAGCACATTGAGACCTTTGTCCTCACATTTTCTGATCCACAGACATTTTCTGCTGCTGCTGCATCATCAGCCCCTGCAGCATTGGCACAAGTTACAGAAGGAGCTCGCATTCAAGAAGCAGGACATCTCAGATGCAGTGGGGCCGAAATTGGAAGATTTGTTGCTATGCTACGAAATCCATCATCTGTTCTCAAGTCATGTGCTGCATTTGCCCTTCTCCAGTTTACCATTCCTGGTGGTCGGCATGCTATGCACCATGCAAGCCTTATGCAAAATGGAGGAGCAGCACGGGTTCTGCGGGCCGCAGCTGCTGCAGCAACTGCTCCTCTTGAAGCCAAAATCTTTGCTAAAATCGTGCTTCGCAATCTTGAGCATCACCACATGGAACCATCACTATAA

Protein Analysis

918

Amino Acids

97.94

Weight (kDa)

6.54

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 40 - 86 2e-09 F-box-like
F-box PF00646 40 - 80 5.1e-06 F-box domain
ARM_ARMC5 PF24768 495 - 756 2.6e-20 ARMC5
Arm PF00514 501 - 542 5.3e-06 Armadillo/beta-catenin-like repeat
Arm PF00514 544 - 584 2.4e-06 Armadillo/beta-catenin-like repeat
Arm PF00514 592 - 628 4.7e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 675 - 713 1.7e-06 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1649, 2108
Acc16I TGCGCA 1 cut(s) 1088
Acc36I ACCTGC 2 cut(s) 1649, 2108
AccB1I GGYRCC 1 cut(s) 1511
AccII CGCG 2 cut(s) 258, 260
AciI CCGC 7 cut(s) 345, 731, 1262, 1321, 1919, 2656, 2661
AclWI GGATC 5 cut(s) 258, 503, 1060, 1073, 2387
AcsI RAATTY 5 cut(s) 376, 616, 1360, 1615, 1700
AcuI CTGAAG 9 cut(s) 350, 860, 1316, 1419, 1479, 1542, 2043, 2109, 2378
AfaI GTAC 2 cut(s) 101, 2258
AfiI CCNNNNNNNGG 3 cut(s) 1192, 1735, 1841
AflII CTTAAG 1 cut(s) 314
AflIII ACRYGT 1 cut(s) 2259
AjiI CACGTC 1 cut(s) 1053
AjnI CCWGG 2 cut(s) 1185, 2590
AjuI GAANNNNNNNTTGG 2 cut(s) 983, 1015
AleI CACNNNNGTG 1 cut(s) 1509
Alw21I GWGCWC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
Alw26I GTCTC 5 cut(s) 776, 873, 1077, 2023, 2363
Alw44I GTGCAC 1 cut(s) 1605
AlwI GGATC 5 cut(s) 258, 503, 1060, 1073, 2387
AlwNI CAGNNNCTG 6 cut(s) 838, 1343, 2021, 2432, 2669, 2678
Ama87I CYCGRG 2 cut(s) 866, 1972
AoxI GGCC 4 cut(s) 476, 1932, 2499, 2658
ApaLI GTGCAC 1 cut(s) 1605
ApoI RAATTY 5 cut(s) 376, 616, 1360, 1615, 1700
ArsI GACNNNNNNTTYG 2 cut(s) 872, 904
Asp700I GAANNNNTTC 1 cut(s) 1329
AspLEI GCGC 5 cut(s) 260, 262, 854, 1089, 1868
AspS9I GGNCC 6 cut(s) 175, 240, 476, 1566, 2499, 2658
AsuC2I CCSGG 4 cut(s) 179, 1973, 1974, 2148
AsuHPI GGTGA 2 cut(s) 1589, 2726
AsuNHI GCTAGC 1 cut(s) 1241
AvaI CYCGRG 2 cut(s) 866, 1972
AvaII GGWCC 3 cut(s) 175, 240, 1566
BaeGI GKGCMC 1 cut(s) 1609
BamHI GGATCC 1 cut(s) 1065
BanI GGYRCC 1 cut(s) 1511
BanII GRGCYC 2 cut(s) 1172, 2464
BauI CACGAG 1 cut(s) 449
BbsI GAAGAC 2 cut(s) 1286, 1970
Bbv12I GWGCWC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
BccI CCATC 9 cut(s) 655, 1274, 1523, 1574, 2261, 2330, 2344, 2545, 2755
BceAI ACGGC 2 cut(s) 461, 503
BciT130I CCWGG 2 cut(s) 1187, 2592
BcnI CCSGG 4 cut(s) 179, 1973, 1974, 2148
BcoDI GTCTC 5 cut(s) 776, 873, 1077, 2023, 2363
BfaI CTAG 5 cut(s) 188, 953, 1242, 1307, 2343
BfmI CTRYAG 8 cut(s) 403, 1200, 1353, 1779, 1914, 2115, 2433, 2670
BfrI CTTAAG 1 cut(s) 314
BfuAI ACCTGC 2 cut(s) 1649, 2108
BglII AGATCT 1 cut(s) 1313
Bme1390I CCNGG 6 cut(s) 179, 1187, 1973, 1974, 2148, 2592
Bme18I GGWCC 3 cut(s) 175, 240, 1566
BmeT110I CYCGRG 2 cut(s) 866, 1972
BmgBI CACGTC 1 cut(s) 1053
BmgT120I GGNCC 6 cut(s) 175, 240, 476, 1566, 2499, 2658
BmiI GGNNCC 5 cut(s) 176, 1067, 1513, 2500, 2745
BmrFI CCNGG 6 cut(s) 179, 1187, 1973, 1974, 2148, 2592
BmtI GCTAGC 1 cut(s) 1245
BoxI GACNNNNGTC 1 cut(s) 2375
BpiI GAAGAC 2 cut(s) 1286, 1970
BpmI CTGGAG 3 cut(s) 452, 1491, 2561
Bpu10I CCTNAGC 1 cut(s) 323
BpuEI CTTGAG 4 cut(s) 1079, 1115, 2534, 2747
BpuMI CCSGG 4 cut(s) 179, 1973, 1974, 2148
Bsa29I ATCGAT 1 cut(s) 1413
BsaAI YACGTR 1 cut(s) 383
BsaI GGTCTC 2 cut(s) 776, 2363
BsaJI CCNNGG 5 cut(s) 279, 1935, 1971, 1972, 2289
BsaXI ACNNNNNCTCC 6 cut(s) 1281, 1311, 1816, 1846, 2046, 2076
Bsc4I CCNNNNNNNGG 3 cut(s) 1192, 1735, 1841
Bse118I RCCGGY 1 cut(s) 1526
Bse1I ACTGG 4 cut(s) 127, 772, 1614, 2578
Bse3DI GCAATG 3 cut(s) 607, 1089, 2034
BseBI CCWGG 2 cut(s) 1187, 2592
BseCI ATCGAT 1 cut(s) 1413
BseDI CCNNGG 5 cut(s) 279, 1935, 1971, 1972, 2289
BseGI GGATG 7 cut(s) 85, 577, 1045, 1123, 1186, 2284, 2355
BseLI CCNNNNNNNGG 3 cut(s) 1192, 1735, 1841
BseMI GCAATG 3 cut(s) 607, 1089, 2034
BseMII CTCAG 2 cut(s) 60, 2500
BseNI ACTGG 4 cut(s) 127, 772, 1614, 2578
BsePI GCGCGC 1 cut(s) 258
BseRI GAGGAG 3 cut(s) 1824, 2652, 2673
BseSI GKGCMC 1 cut(s) 1609
BsgI GTGCAG 2 cut(s) 1617, 2172
Bsh1236I CGCG 2 cut(s) 258, 260
BshFI GGCC 4 cut(s) 478, 1934, 2501, 2660
BshNI GGYRCC 1 cut(s) 1511
BshVI ATCGAT 1 cut(s) 1413
BsiHKAI GWGCWC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
BsiHKCI CYCGRG 2 cut(s) 866, 1972
BsiSI CCGG 4 cut(s) 178, 1527, 1973, 2147
BslFI GGGAC 4 cut(s) 188, 721, 849, 1800
BslI CCNNNNNNNGG 3 cut(s) 1192, 1735, 1841
BsmAI GTCTC 5 cut(s) 776, 873, 1077, 2023, 2363
BsmFI GGGAC 4 cut(s) 188, 721, 849, 1800
BsmI GAATGC 2 cut(s) 1378, 2466
BsnI GGCC 4 cut(s) 478, 1934, 2501, 2660
Bso31I GGTCTC 2 cut(s) 776, 2363
BsoBI CYCGRG 2 cut(s) 866, 1972
Bsp1286I GDGCHC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
Bsp1407I TGTACA 1 cut(s) 99
Bsp143I GATC 7 cut(s) 169, 250, 495, 1065, 1313, 1549, 2392
Bsp19I CCATGG 1 cut(s) 279
BspACI CCGC 7 cut(s) 345, 731, 1262, 1321, 1919, 2656, 2661
BspANI GGCC 4 cut(s) 478, 1934, 2501, 2660
BspCNI CTCAG 2 cut(s) 61, 2499
BspDI ATCGAT 1 cut(s) 1413
BspFNI CGCG 2 cut(s) 258, 260
BspHI TCATGA 1 cut(s) 1837
BspLI GGNNCC 5 cut(s) 176, 1067, 1513, 2500, 2745
BspMAI CTGCAG 6 cut(s) 407, 1783, 1918, 2119, 2437, 2674
BspMI ACCTGC 2 cut(s) 1649, 2108
BspOI GCTAGC 1 cut(s) 1245
BspPI GGATC 5 cut(s) 258, 503, 1060, 1073, 2387
BspT107I GGYRCC 1 cut(s) 1511
BspTI CTTAAG 1 cut(s) 314
BspTNI GGTCTC 2 cut(s) 776, 2363
BsrDI GCAATG 3 cut(s) 607, 1089, 2034
BsrFI RCCGGY 1 cut(s) 1526
BsrGI TGTACA 1 cut(s) 99
BsrI ACTGG 4 cut(s) 127, 772, 1614, 2578
BssAI RCCGGY 1 cut(s) 1526
BssECI CCNNGG 5 cut(s) 279, 1935, 1971, 1972, 2289
BssHII GCGCGC 1 cut(s) 258
BssMI GATC 7 cut(s) 169, 250, 495, 1065, 1313, 1549, 2392
BssSI CACGAG 1 cut(s) 449
BssT1I CCWWGG 3 cut(s) 279, 1935, 2289
Bst2BI CACGAG 1 cut(s) 449
Bst2UI CCWGG 2 cut(s) 1187, 2592
Bst4CI ACNGT 2 cut(s) 142, 644
Bst6I CTCTTC 1 cut(s) 1455
BstAFI CTTAAG 1 cut(s) 314
BstAPI GCANNNNNTGC 6 cut(s) 754, 1604, 1913, 2608, 2669, 2678
BstAUI TGTACA 1 cut(s) 99
BstBAI YACGTR 1 cut(s) 383
BstDEI CTNAG 5 cut(s) 69, 323, 603, 2332, 2486
BstDSI CCRYGG 1 cut(s) 279
BstENI CCTNNNNNAGG 1 cut(s) 1839
BstF5I GGATG 7 cut(s) 85, 577, 1045, 1123, 1186, 2284, 2355
BstFNI CGCG 2 cut(s) 258, 260
BstHHI GCGC 5 cut(s) 260, 262, 854, 1089, 1868
BstKTI GATC 7 cut(s) 172, 253, 498, 1068, 1316, 1552, 2395
BstMAI GTCTC 5 cut(s) 776, 873, 1077, 2023, 2363
BstMBI GATC 7 cut(s) 169, 250, 495, 1065, 1313, 1549, 2392
BstNI CCWGG 2 cut(s) 1187, 2592
BstNSI RCATGY 3 cut(s) 1673, 2263, 2606
BstPAI GACNNNNGTC 1 cut(s) 2375
BstSCI CCNGG 6 cut(s) 177, 1185, 1971, 1972, 2146, 2590
BstSFI CTRYAG 8 cut(s) 403, 1200, 1353, 1779, 1914, 2115, 2433, 2670
BstSLI GKGCMC 1 cut(s) 1609
BstUI CGCG 2 cut(s) 258, 260
BstV2I GAAGAC 2 cut(s) 1286, 1970
BstX2I RGATCY 3 cut(s) 250, 1065, 1313
BstYI RGATCY 3 cut(s) 250, 1065, 1313
Bsu15I ATCGAT 1 cut(s) 1413
BsuRI GGCC 4 cut(s) 478, 1934, 2501, 2660
BsuTUI ATCGAT 1 cut(s) 1413
BtgI CCRYGG 1 cut(s) 279
BtgZI GCGATG 1 cut(s) 1501
BtrI CACGTC 1 cut(s) 1053
BtsCI GGATG 7 cut(s) 85, 577, 1045, 1123, 1186, 2284, 2355
BtsI GCAGTG 4 cut(s) 508, 1659, 1788, 2500
BtsIMutI CAGTG 6 cut(s) 102, 508, 1607, 1659, 1788, 2500
BveI ACCTGC 2 cut(s) 1649, 2108
CaiI CAGNNNCTG 6 cut(s) 838, 1343, 2021, 2432, 2669, 2678
CciI TCATGA 1 cut(s) 1837
CfoI GCGC 5 cut(s) 260, 262, 854, 1089, 1868
Cfr10I RCCGGY 1 cut(s) 1526
Cfr13I GGNCC 6 cut(s) 175, 240, 476, 1566, 2499, 2658
Cfr9I CCCGGG 1 cut(s) 1972
ClaI ATCGAT 1 cut(s) 1413
Csp6I GTAC 2 cut(s) 100, 2257
CviQI GTAC 2 cut(s) 100, 2257
DdeI CTNAG 5 cut(s) 69, 323, 603, 2332, 2486
DpnI GATC 7 cut(s) 171, 252, 497, 1067, 1315, 1551, 2394
DpnII GATC 7 cut(s) 169, 250, 495, 1065, 1313, 1549, 2392
Eam1104I CTCTTC 1 cut(s) 1455
EarI CTCTTC 1 cut(s) 1455
EciI GGCGGA 1 cut(s) 1277
Ecl136II GAGCTC 2 cut(s) 1170, 2462
Eco130I CCWWGG 3 cut(s) 279, 1935, 2289
Eco147I AGGCCT 1 cut(s) 1934
Eco24I GRGCYC 2 cut(s) 1172, 2464
Eco31I GGTCTC 2 cut(s) 776, 2363
Eco47I GGWCC 3 cut(s) 175, 240, 1566
Eco53kI GAGCTC 2 cut(s) 1170, 2462
Eco57I CTGAAG 9 cut(s) 350, 860, 1316, 1419, 1479, 1542, 2043, 2109, 2378
Eco88I CYCGRG 2 cut(s) 866, 1972
EcoICRI GAGCTC 2 cut(s) 1170, 2462
EcoNI CCTNNNNNAGG 1 cut(s) 1839
EcoRII CCWGG 2 cut(s) 1185, 2590
EcoT14I CCWWGG 3 cut(s) 279, 1935, 2289
EcoT38I GRGCYC 2 cut(s) 1172, 2464
ErhI CCWWGG 3 cut(s) 279, 1935, 2289
FaqI GGGAC 4 cut(s) 188, 721, 849, 1800
FauI CCCGC 3 cut(s) 1314, 1912, 2649
FokI GGATG 7 cut(s) 92, 584, 1052, 1130, 1193, 2291, 2362
FriOI GRGCYC 2 cut(s) 1172, 2464
FspBI CTAG 5 cut(s) 188, 953, 1242, 1307, 2343
FspI TGCGCA 1 cut(s) 1088
GlaI GCGC 5 cut(s) 259, 261, 853, 1088, 1867
GsuI CTGGAG 3 cut(s) 452, 1491, 2561
HaeIII GGCC 4 cut(s) 478, 1934, 2501, 2660
HapII CCGG 4 cut(s) 178, 1527, 1973, 2147
HhaI GCGC 5 cut(s) 260, 262, 854, 1089, 1868
Hin6I GCGC 5 cut(s) 258, 260, 852, 1087, 1866
HinP1I GCGC 5 cut(s) 258, 260, 852, 1087, 1866
HindIII AAGCTT 3 cut(s) 320, 548, 1539
HinfI GANTC 9 cut(s) 4, 184, 310, 341, 1410, 1483, 1845, 1876, 2131
HpaII CCGG 4 cut(s) 178, 1527, 1973, 2147
HphI GGTGA 2 cut(s) 1589, 2726
Hpy166II GTNNAC 5 cut(s) 100, 240, 577, 1607, 2583
Hpy188I TCNGA 9 cut(s) 165, 648, 1339, 2023, 2089, 2308, 2358, 2392, 2489
Hpy8I GTNNAC 5 cut(s) 100, 240, 577, 1607, 2583
HpyCH4III ACNGT 2 cut(s) 142, 644
HpyCH4IV ACGT 4 cut(s) 382, 1052, 1291, 1594
HpyF3I CTNAG 5 cut(s) 69, 323, 603, 2332, 2486
HpySE526I ACGT 4 cut(s) 382, 1052, 1291, 1594
HspAI GCGC 5 cut(s) 258, 260, 852, 1087, 1866
Kzo9I GATC 7 cut(s) 169, 250, 495, 1065, 1313, 1549, 2392
LmnI GCTCC 4 cut(s) 898, 2459, 2639, 2686
MaeI CTAG 5 cut(s) 188, 953, 1242, 1307, 2343
MaeII ACGT 4 cut(s) 382, 1052, 1291, 1594
MaeIII GTNAC 3 cut(s) 918, 1691, 2449
MalI GATC 7 cut(s) 171, 252, 497, 1067, 1315, 1551, 2394
MboI GATC 7 cut(s) 169, 250, 495, 1065, 1313, 1549, 2392
MfeI CAATTG 1 cut(s) 1908
MflI RGATCY 3 cut(s) 250, 1065, 1313
MhlI GDGCHC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
MlyI GAGTC 3 cut(s) 13, 193, 1854
MmeI TCCRAC 1 cut(s) 1474
MroXI GAANNNNTTC 1 cut(s) 1329
MseI TTAA 4 cut(s) 315, 591, 1160, 2142
MslI CAYNNNNRTG 2 cut(s) 582, 1509
MspA1I CMGCKG 6 cut(s) 347, 1601, 1862, 1919, 2114, 2666
MspCI CTTAAG 1 cut(s) 314
MspI CCGG 4 cut(s) 178, 1527, 1973, 2147
MspR9I CCNGG 6 cut(s) 179, 1187, 1973, 1974, 2148, 2592
MunI CAATTG 1 cut(s) 1908
Mva1269I GAATGC 2 cut(s) 1378, 2466
MvaI CCWGG 2 cut(s) 1187, 2592
MvnI CGCG 2 cut(s) 258, 260
NciI CCSGG 4 cut(s) 179, 1973, 1974, 2148
NcoI CCATGG 1 cut(s) 279
NdeII GATC 7 cut(s) 169, 250, 495, 1065, 1313, 1549, 2392
NheI GCTAGC 1 cut(s) 1241
NlaIV GGNNCC 5 cut(s) 176, 1067, 1513, 2500, 2745
NmeAIII GCCGAG 2 cut(s) 84, 1120
NsbI TGCGCA 1 cut(s) 1088
NspI RCATGY 3 cut(s) 1673, 2263, 2606
OliI CACNNNNGTG 1 cut(s) 1509
PaeI GCATGC 2 cut(s) 1673, 2606
PagI TCATGA 1 cut(s) 1837
PaqCI CACCTGC 2 cut(s) 1649, 2108
PauI GCGCGC 1 cut(s) 258
PceI AGGCCT 1 cut(s) 1934
PciI ACATGT 1 cut(s) 2259
PctI GAATGC 2 cut(s) 1378, 2466
PdmI GAANNNNTTC 1 cut(s) 1329
PfeI GAWTC 6 cut(s) 310, 341, 1410, 1483, 1876, 2131
PfoI TCCNGGA 1 cut(s) 1185
PleI GAGTC 3 cut(s) 12, 192, 1853
PpsI GAGTC 3 cut(s) 12, 192, 1853
Ppu21I YACGTR 1 cut(s) 383
PscI ACATGT 1 cut(s) 2259
PshAI GACNNNNGTC 1 cut(s) 2375
Psp124BI GAGCTC 2 cut(s) 1172, 2464
Psp6I CCWGG 2 cut(s) 1185, 2590
PspGI CCWGG 2 cut(s) 1185, 2590
PspN4I GGNNCC 5 cut(s) 176, 1067, 1513, 2500, 2745
PspPI GGNCC 6 cut(s) 175, 240, 476, 1566, 2499, 2658
PstI CTGCAG 6 cut(s) 407, 1783, 1918, 2119, 2437, 2674
PstNI CAGNNNCTG 6 cut(s) 838, 1343, 2021, 2432, 2669, 2678
PsuI RGATCY 3 cut(s) 250, 1065, 1313
PteI GCGCGC 1 cut(s) 258
PvuII CAGCTG 4 cut(s) 1601, 1862, 2114, 2666
RsaI GTAC 2 cut(s) 101, 2258
RsaNI GTAC 2 cut(s) 100, 2257
RseI CAYNNNNRTG 2 cut(s) 582, 1509
SacI GAGCTC 2 cut(s) 1172, 2464
SaqAI TTAA 4 cut(s) 315, 591, 1160, 2142
Sau3AI GATC 7 cut(s) 169, 250, 495, 1065, 1313, 1549, 2392
Sau96I GGNCC 6 cut(s) 175, 240, 476, 1566, 2499, 2658
SchI GAGTC 3 cut(s) 13, 193, 1854
ScrFI CCNGG 6 cut(s) 179, 1187, 1973, 1974, 2148, 2592
SduI GDGCHC 6 cut(s) 1172, 1609, 1804, 2002, 2125, 2464
SfcI CTRYAG 8 cut(s) 403, 1200, 1353, 1779, 1914, 2115, 2433, 2670
SinI GGWCC 3 cut(s) 175, 240, 1566
SmaI CCCGGG 1 cut(s) 1974
SmiMI CAYNNNNRTG 2 cut(s) 582, 1509
SmlI CTYRAG 5 cut(s) 314, 1058, 1130, 2549, 2726
SmoI CTYRAG 5 cut(s) 314, 1058, 1130, 2549, 2726
SphI GCATGC 2 cut(s) 1673, 2606
SseBI AGGCCT 1 cut(s) 1934
SsiI CCGC 7 cut(s) 345, 731, 1262, 1321, 1919, 2656, 2661
SspMI CTAG 5 cut(s) 188, 953, 1242, 1307, 2343
SstI GAGCTC 2 cut(s) 1172, 2464
StuI AGGCCT 1 cut(s) 1934
StyD4I CCNGG 6 cut(s) 177, 1185, 1971, 1972, 2146, 2590
StyI CCWWGG 3 cut(s) 279, 1935, 2289
TaaI ACNGT 2 cut(s) 142, 644
TaiI ACGT 4 cut(s) 385, 1055, 1294, 1597
TaqI TCGA 7 cut(s) 299, 553, 774, 969, 1413, 1900, 1929
TatI WGTACW 1 cut(s) 99
TauI GCSGC 1 cut(s) 2663
TfiI GAWTC 6 cut(s) 310, 341, 1410, 1483, 1876, 2131
Tru1I TTAA 4 cut(s) 315, 591, 1160, 2142
Tru9I TTAA 4 cut(s) 315, 591, 1160, 2142
TscAI CASTG 6 cut(s) 102, 508, 1614, 1659, 1788, 2500
TspGWI ACGGA 2 cut(s) 673, 2150
TspMI CCCGGG 1 cut(s) 1972
TspRI CASTG 6 cut(s) 102, 508, 1614, 1659, 1788, 2500
Vha464I CTTAAG 1 cut(s) 314
VneI GTGCAC 1 cut(s) 1605
VpaK11BI GGWCC 3 cut(s) 175, 240, 1566
XagI CCTNNNNNAGG 1 cut(s) 1839
XapI RAATTY 5 cut(s) 376, 616, 1360, 1615, 1700
XceI RCATGY 3 cut(s) 1673, 2263, 2606
XmaI CCCGGG 1 cut(s) 1972
XmnI GAANNNNTTC 1 cut(s) 1329
XspI CTAG 5 cut(s) 188, 953, 1242, 1307, 2343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.