FvH4_7g14290

Protein of unknown function (DUF3741)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0004678
Physical Location & Seq
Reverse (-)
12646040 .. 12652331
6292 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g14290.t3

Sequence Viewer

Length: 2856 bp
ATGATGGCAAAGAAGTCCCAGAGACGCACTATTCGGTATGAGAAAGATCAGTTAGGCTGTATGTGGGGCTTGATCAACATCTTTGATTTTCGACACGGCCGCCCCACCTGGAAGTTGATCTCTGATAAGAGGCATGGAAGCAAGCAAGCTATTGGTACTGGGTCTCCAAGGAACAAGTTTGAGGTGTTGAGTGGTTTGGATGAGAACCTTCAAGGCGCCCTTGAAAGCAATGTGGACCCAACAGCAACAGTGGTTGGCGATGCTTGTAAGCCTAGTGTGAAGAAACTTATGGAAGAAGAAATGTTCAGTGAGCAGGACATGAAGAAAGAGATCAACTCTGATGAAGTAGCAAGTAACCAAACCAATGCAAGCCGGACAAGAATGGACCATAAAAAGACAAAGAAGACTCGTAGGAAAAGCCAGGATATGGACACCTATACTTTGAATGGTTCTGAGACTTCGGAACCTGGATGCTCTTGCAATCAGAAACAAGAGCATAAATCTAGAAGTAACTGTGGTGTAGAAGAGATAATGGAAGAGGTAGGCTGCCAGATCCATCAAAAGTATCATGATCCAAATGGAGAGACTCCTGTCAAGTCAAACTACAAGCATTCTGATTTTGAAGAGAAATTATGTGTGACAATCAAGGAGTTCATGAATCAGAAGTTAACTGATGGGAAGCATCTCACAGAAGATCAGAAAATCCAGCACTTCAGAGAACTAATGGATGCACTTGAGACCTTAAGTTCGGATGAGGAATTGTTTCTGAAACTCTTACAAGATCCAAACTCACTTCTAGCAAAGTATGTCCTGAACTTGCAGGATTCTCAAAGAGAGAAAGATAAAGAATCCAAGGCTGTTACAGAGTCAAACTCCACAGAGAAACTTGAGTATCCAAAACAACCTGAGGAGCTTGTCATTCGTAAACAGCGATATTTTTTCAGGAGAAAGAGCAAGCCTCAAGAAAGGGAACCAGCAGAGGCCAATGAGAACTTTGATGCTTCTAAGAGAATTGTCATTCTGAAGCCTGGGCCTACAATTTCACAGGATTCTGAAACCGAAAGTAAAAAGATCCCAGAGTCCCATTATTTGGTAAGAAGTAGAGGGCCAAATGAAAAGGTTGGCTCTCACTTTTTTCTTTCTGAAATAAAAAGGAAACTAAAGAATGCTATGGGAAAGCAACAGCATGGGGTATCTGCCATTGGAAATTCTAACAGATTGCCCTATGAGCATCCAAGTTTGGGACAGGGTGACAAAGCAAGTGTGAAGGAAAAGTTTGGAAGTTCTCCTAGTAAAGATCACTTCTACATGGAAAGAATTGCTAGACCTTCTGGTGGTATCAAGAGAGCAGACAAGAGCGGCAAAATGAAAGAATCTGAAATGAATTTGAACCATGAAGAACCAGGAATTCCTAATCAAAGAGTATCTAACATCTATATTGAGGCAAAGAAGCATCTCTCCGAGATGCTGAGCAATGGAGATGCAGGTGTAGATTTCTCAGGACAACACTTCACCAAGACCTTGGGAAGGATTCTCTCTCTCCCTGAGTACAATGTGTCTCCTAGGGGAAGTCCCGGAAGGGACTCGGAGCTTGGGTTTGTTACTGCACAAATGAGATTATCTCCTCGCGATCGAGTTTGCAAGGCCAATGAGAATGCATGCTCTCCTAAAAAAGAGAAAAATGTCAGTCCTCTAGGTCAAGTAGCACAAAACTTAGAGGATAGGTTATCTATTTCTGACAACAACCCTGGCTGTGAAGTACAGCCTCCTAATTCCTTACCGAGAACCTCAGTTGATTTGATTAATGACAGTGAAGCAGAAGAAAGCCATGTTTCCATTGAAGATGAGATGAATCCTGAAGGTGATATAGATATTGCAAAAGATATTACAATTGTAGATTGGGAAGAAAAAAGTATACTGGATGCTCCTTCAGAACCAAGTGACTCTTCCATTGCCAGGGATGACCGAAGTGGCAACATGACTGAAATTGTGGATGATGAAAAGTGTTCCAAATGGTTAAATCAGGATTTCTATGAAGAGAGTCCAGGGCCATCTTCTGCATTTGCATCCCCATCCAGCTCTCCAACAACCAAACATGTTGAAGAGTTAGACATTGCCATCGGCATACCAGAGCGGCCAAGTCCTGTTTCAGTTCTTGATCCACTATTCTCAGAGGATGAGATTAGCCCTTCAAAAACCATTTCTCAACCTGTAGAACTACGAATACAACCCCTGCAGATCCGATTTGAAGATCACGAATCTTCAGCCATAGATGAAGCTAACACTGCAAAAACTTGTACAGAAGAGAAGGAACTAATATATGATTTTGTAAAAGAAGTTATGCAAGCCTCTGGCTTCAACTGGGATGACTTCTGCATGAAGTGGCTTTATTCAGACCAACCTATTGAGCCTTCATTGTGTGATGATATAGAAGTTTGTCCTAACTCGCTCTGCTCTGACCAGAAGCTCCTTGTCAACTGTATCAATGAAGTTCTAGTGGAGGTGTGTGGGCGTTACTATGGTTGCTTCCCTTGGGTATCATCGGTGAAACCTATAAGGCCAGTGCCGGATATGAAGACTGCTATACACGAGGTTTGGGTAGAAGTTTACTGGCATCTCCTTCCACTTCCATTGCCTCATAGCTTGGACCAGATAGTGGCAAAAGACTTGTCAAGAACCGGAGCATGGATGGACCTTCGCTTTGATACTGAAACTGTTGGTGTTGACATGGGTGAAGTCATTCTCCAAGACTTGATCGAAGACATCATATTAAGCTATGTAGATGGAAGTCCCAAGAGTGAAGCTGCTTTAGTCTCTGATGAACTAAATGATACAGAGAGCATTCTCAACCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3741 DUF4378

Protein Analysis

952

Amino Acids

107.3

Weight (kDa)

5.13

Isoelectric Point (pI)

53.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3741 PF12552 220 - 264 1.9e-18 Protein of unknown function (DUF3741)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1475
Acc36I ACCTGC 1 cut(s) 1475
AccB1I GGYRCC 1 cut(s) 215
AccB7I CCANNNNNTGG 3 cut(s) 427, 1090, 2656
AccBSI CCGCTC 2 cut(s) 1359, 2134
AccI GTMKAC 1 cut(s) 1915
AccII CGCG 1 cut(s) 1629
AciI CCGC 3 cut(s) 100, 1359, 2134
AclWI GGATC 6 cut(s) 547, 566, 776, 1066, 2153, 2233
AcoI YGGCCR 2 cut(s) 97, 2135
AcsI RAATTY 3 cut(s) 1207, 1384, 1407
AcuI CTGAAG 5 cut(s) 697, 1043, 1878, 1914, 2247
AcyI GRCGYC 1 cut(s) 216
AfaI GTAC 4 cut(s) 157, 1550, 1761, 2299
AfiI CCNNNNNNNGG 8 cut(s) 427, 1090, 1241, 1334, 1527, 1956, 2656, 2685
AflII CTTAAG 1 cut(s) 742
AflIII ACRYGT 1 cut(s) 2095
AjnI CCWGG 8 cut(s) 107, 420, 466, 1027, 1402, 1747, 1955, 2044
AjuI GAANNNNNNNTTGG 4 cut(s) 1930, 1962, 2131, 2163
AluBI AGCT 9 cut(s) 149, 913, 1591, 2079, 2279, 2467, 2643, 2775, 2804
AluI AGCT 9 cut(s) 149, 913, 1591, 2079, 2279, 2467, 2643, 2775, 2804
Alw26I GTCTC 7 cut(s) 16, 168, 449, 578, 731, 1563, 2818
AlwI GGATC 6 cut(s) 547, 566, 776, 1066, 2153, 2233
AoxI GGCC 8 cut(s) 97, 981, 1031, 1106, 1644, 2048, 2135, 2558
ApeKI GCWGC 2 cut(s) 546, 2804
ApoI RAATTY 3 cut(s) 1207, 1384, 1407
ArsI GACNNNNNNTTYG 8 cut(s) 15, 47, 730, 762, 2654, 2684, 2686, 2716
AseI ATTAAT 1 cut(s) 1803
Asp700I GAANNNNTTC 2 cut(s) 762, 2739
AspA2I CCTAGG 1 cut(s) 1562
AspLEI GCGC 1 cut(s) 218
AspS9I GGNCC 7 cut(s) 235, 385, 1031, 1106, 2048, 2647, 2692
AsuC2I CCSGG 1 cut(s) 1575
AsuHPI GGTGA 5 cut(s) 1262, 1504, 1874, 2557, 2744
AvaII GGWCC 4 cut(s) 235, 385, 2647, 2692
AvrII CCTAGG 1 cut(s) 1562
AxyI CCTNAGG 1 cut(s) 906
BaeI ACNNNNGTAYC 2 cut(s) 875, 908
BanI GGYRCC 1 cut(s) 215
BauI CACGAG 1 cut(s) 2588
BbsI GAAGAC 3 cut(s) 410, 2582, 2766
BbvI GCAGC 2 cut(s) 533, 2791
BccI CCATC 7 cut(s) 564, 668, 2059, 2080, 2126, 2683, 2777
BceAI ACGGC 1 cut(s) 112
BciT130I CCWGG 8 cut(s) 109, 422, 468, 1029, 1404, 1749, 1957, 2046
BciVI GTATCC 1 cut(s) 903
BclI TGATCA 1 cut(s) 72
BcnI CCSGG 1 cut(s) 1575
BcoDI GTCTC 7 cut(s) 16, 168, 449, 578, 731, 1563, 2818
BfaI CTAG 8 cut(s) 273, 504, 797, 1290, 1323, 1563, 1694, 2495
BfmI CTRYAG 2 cut(s) 2211, 2234
BfoI RGCGCY 1 cut(s) 219
BfrI CTTAAG 1 cut(s) 742
BfuAI ACCTGC 1 cut(s) 1475
BfuI GTATCC 1 cut(s) 903
BisI GCNGC 5 cut(s) 100, 547, 1360, 2135, 2805
BlnI CCTAGG 1 cut(s) 1562
BlpI GCTNAGC 1 cut(s) 1469
BlsI GCNGC 5 cut(s) 101, 548, 1361, 2136, 2806
Bme1390I CCNGG 9 cut(s) 109, 422, 468, 1029, 1404, 1575, 1749, 1957, 2046
Bme18I GGWCC 4 cut(s) 235, 385, 2647, 2692
BmgT120I GGNCC 7 cut(s) 235, 385, 1031, 1106, 2048, 2647, 2692
BmiI GGNNCC 4 cut(s) 217, 237, 465, 972
BmrFI CCNGG 9 cut(s) 109, 422, 468, 1029, 1404, 1575, 1749, 1957, 2046
BmrI ACTGGG 2 cut(s) 168, 2371
BmuI ACTGGG 2 cut(s) 168, 2371
BoxI GACNNNNGTC 1 cut(s) 590
BpiI GAAGAC 3 cut(s) 410, 2582, 2766
BplI GAGNNNNNCTC 8 cut(s) 320, 352, 857, 889, 943, 975, 1606, 1638
Bpu1102I GCTNAGC 1 cut(s) 1469
BpuEI CTTGAG 3 cut(s) 755, 908, 945
BpuMI CCSGG 1 cut(s) 1575
BsaBI GATNNNNATC 1 cut(s) 77
BsaHI GRCGYC 1 cut(s) 216
BsaI GGTCTC 2 cut(s) 168, 731
BsaJI CCNNGG 9 cut(s) 167, 852, 1028, 1521, 1562, 1747, 1956, 2045, 2531
BsaWI WCCGGW 1 cut(s) 2678
BsaXI ACNNNNNCTCC 4 cut(s) 148, 178, 1580, 1610
Bsc4I CCNNNNNNNGG 8 cut(s) 427, 1090, 1241, 1334, 1527, 1956, 2656, 2685
Bse1I ACTGG 5 cut(s) 163, 1923, 2366, 2561, 2615
Bse21I CCTNAGG 1 cut(s) 906
Bse3DI GCAATG 5 cut(s) 235, 1480, 1950, 2112, 2630
Bse8I GATNNNNATC 1 cut(s) 77
BseBI CCWGG 8 cut(s) 109, 422, 468, 1029, 1404, 1749, 1957, 2046
BseDI CCNNGG 9 cut(s) 167, 852, 1028, 1521, 1562, 1747, 1956, 2045, 2531
BseJI GATNNNNATC 1 cut(s) 77
BseLI CCNNNNNNNGG 8 cut(s) 427, 1090, 1241, 1334, 1527, 1956, 2656, 2685
BseMI GCAATG 5 cut(s) 235, 1480, 1950, 2112, 2630
BseMII CTCAG 7 cut(s) 444, 897, 1460, 1512, 1536, 1803, 2184
BseNI ACTGG 5 cut(s) 163, 1923, 2366, 2561, 2615
BseRI GAGGAG 2 cut(s) 923, 1614
BseX3I CGGCCG 1 cut(s) 97
BseXI GCAGC 2 cut(s) 533, 2791
BsgI GTGCAG 1 cut(s) 1590
Bsh1236I CGCG 1 cut(s) 1629
Bsh1285I CGRYCG 2 cut(s) 100, 1633
BshFI GGCC 8 cut(s) 99, 983, 1033, 1108, 1646, 2050, 2137, 2560
BshNI GGYRCC 1 cut(s) 215
BsiEI CGRYCG 2 cut(s) 100, 1633
BsiSI CCGG 4 cut(s) 373, 1575, 2567, 2679
BslFI GGGAC 5 cut(s) 1066, 1257, 1557, 1595, 2775
BslI CCNNNNNNNGG 8 cut(s) 427, 1090, 1241, 1334, 1527, 1956, 2656, 2685
BsmAI GTCTC 7 cut(s) 16, 168, 449, 578, 731, 1563, 2818
BsmBI CGTCTC 1 cut(s) 16
BsmFI GGGAC 5 cut(s) 1066, 1257, 1557, 1595, 2775
BsmI GAATGC 4 cut(s) 610, 1171, 1660, 2841
BsnI GGCC 8 cut(s) 99, 983, 1033, 1108, 1646, 2050, 2137, 2560
Bso31I GGTCTC 2 cut(s) 168, 731
Bsp1407I TGTACA 1 cut(s) 2297
Bsp1720I GCTNAGC 1 cut(s) 1469
Bsp68I TCGCGA 1 cut(s) 1629
BspACI CCGC 3 cut(s) 100, 1359, 2134
BspANI GGCC 8 cut(s) 99, 983, 1033, 1108, 1646, 2050, 2137, 2560
BspCNI CTCAG 7 cut(s) 445, 898, 1461, 1511, 1537, 1802, 2183
BspFNI CGCG 1 cut(s) 1629
BspHI TCATGA 2 cut(s) 568, 654
BspLI GGNNCC 4 cut(s) 217, 237, 465, 972
BspMAI CTGCAG 1 cut(s) 2238
BspMI ACCTGC 1 cut(s) 1475
BspPI GGATC 6 cut(s) 547, 566, 776, 1066, 2153, 2233
BspT107I GGYRCC 1 cut(s) 215
BspTI CTTAAG 1 cut(s) 742
BspTNI GGTCTC 2 cut(s) 168, 731
BsrBI CCGCTC 2 cut(s) 1359, 2134
BsrDI GCAATG 5 cut(s) 235, 1480, 1950, 2112, 2630
BsrGI TGTACA 1 cut(s) 2297
BsrI ACTGG 5 cut(s) 163, 1923, 2366, 2561, 2615
BssECI CCNNGG 9 cut(s) 167, 852, 1028, 1521, 1562, 1747, 1956, 2045, 2531
BssNAI GTATAC 1 cut(s) 1916
BssNI GRCGYC 1 cut(s) 216
BssSI CACGAG 1 cut(s) 2588
BssT1I CCWWGG 5 cut(s) 167, 852, 1521, 1562, 2531
Bst1107I GTATAC 1 cut(s) 1916
Bst2BI CACGAG 1 cut(s) 2588
Bst2UI CCWGG 8 cut(s) 109, 422, 468, 1029, 1404, 1749, 1957, 2046
Bst4CI ACNGT 5 cut(s) 250, 515, 1811, 2480, 2716
Bst6I CTCTTC 7 cut(s) 519, 531, 618, 1951, 2031, 2097, 2298
BstACI GRCGYC 1 cut(s) 216
BstAFI CTTAAG 1 cut(s) 742
BstAUI TGTACA 1 cut(s) 2297
BstC8I GCNNGC 6 cut(s) 143, 147, 370, 956, 1660, 2346
BstDEI CTNAG 9 cut(s) 453, 906, 1005, 1469, 1498, 1545, 1714, 1789, 2170
BstENI CCTNNNNNAGG 1 cut(s) 1525
BstFNI CGCG 1 cut(s) 1629
BstH2I RGCGCY 1 cut(s) 219
BstHHI GCGC 1 cut(s) 218
BstMAI GTCTC 7 cut(s) 16, 168, 449, 578, 731, 1563, 2818
BstMCI CGRYCG 2 cut(s) 100, 1633
BstMWI GCNNNNNNNGC 2 cut(s) 1228, 2285
BstNI CCWGG 8 cut(s) 109, 422, 468, 1029, 1404, 1749, 1957, 2046
BstNSI RCATGY 2 cut(s) 1662, 2099
BstPAI GACNNNNGTC 1 cut(s) 590
BstSCI CCNGG 9 cut(s) 107, 420, 466, 1027, 1402, 1573, 1747, 1955, 2044
BstSFI CTRYAG 2 cut(s) 2211, 2234
BstUI CGCG 1 cut(s) 1629
BstV1I GCAGC 2 cut(s) 533, 2791
BstV2I GAAGAC 3 cut(s) 410, 2582, 2766
BstX2I RGATCY 4 cut(s) 552, 781, 1071, 2238
BstXI CCANNNNNNTGG 1 cut(s) 1522
BstYI RGATCY 4 cut(s) 552, 781, 1071, 2238
BstZ17I GTATAC 1 cut(s) 1916
BstZI CGGCCG 1 cut(s) 97
Bsu36I CCTNAGG 1 cut(s) 906
BsuI GTATCC 1 cut(s) 903
BsuRI GGCC 8 cut(s) 99, 983, 1033, 1108, 1646, 2050, 2137, 2560
BtgZI GCGATG 1 cut(s) 273
BtsI GCAGTG 1 cut(s) 2283
BtsIMutI CAGTG 5 cut(s) 255, 313, 1816, 2283, 2568
BtuMI TCGCGA 1 cut(s) 1629
BveI ACCTGC 1 cut(s) 1475
Cac8I GCNNGC 6 cut(s) 143, 147, 370, 956, 1660, 2346
CciI TCATGA 2 cut(s) 568, 654
CfoI GCGC 1 cut(s) 218
Cfr13I GGNCC 7 cut(s) 235, 385, 1031, 1106, 2048, 2647, 2692
CseI GACGC 1 cut(s) 33
Csp6I GTAC 4 cut(s) 156, 1549, 1760, 2298
CspCI CAANNNNNGTGG 2 cut(s) 2613, 2648
CviQI GTAC 4 cut(s) 156, 1549, 1760, 2298
DdeI CTNAG 9 cut(s) 453, 906, 1005, 1469, 1498, 1545, 1714, 1789, 2170
DinI GGCGCC 1 cut(s) 217
EaeI YGGCCR 2 cut(s) 97, 2135
EagI CGGCCG 1 cut(s) 97
Eam1104I CTCTTC 7 cut(s) 519, 531, 618, 1951, 2031, 2097, 2298
EarI CTCTTC 7 cut(s) 519, 531, 618, 1951, 2031, 2097, 2298
EclXI CGGCCG 1 cut(s) 97
Eco130I CCWWGG 5 cut(s) 167, 852, 1521, 1562, 2531
Eco31I GGTCTC 2 cut(s) 168, 731
Eco47I GGWCC 4 cut(s) 235, 385, 2647, 2692
Eco52I CGGCCG 1 cut(s) 97
Eco57I CTGAAG 5 cut(s) 697, 1043, 1878, 1914, 2247
Eco81I CCTNAGG 1 cut(s) 906
EcoNI CCTNNNNNAGG 1 cut(s) 1525
EcoRI GAATTC 1 cut(s) 1407
EcoRII CCWGG 8 cut(s) 107, 420, 466, 1027, 1402, 1747, 1955, 2044
EcoT14I CCWWGG 5 cut(s) 167, 852, 1521, 1562, 2531
EcoT22I ATGCAT 1 cut(s) 1660
EgeI GGCGCC 1 cut(s) 217
EheI GGCGCC 1 cut(s) 217
ErhI CCWWGG 5 cut(s) 167, 852, 1521, 1562, 2531
Esp3I CGTCTC 1 cut(s) 16
FalI AAGNNNNNCTT 4 cut(s) 204, 236, 1930, 1962
FaqI GGGAC 5 cut(s) 1066, 1257, 1557, 1595, 2775
FbaI TGATCA 1 cut(s) 72
FblI GTMKAC 1 cut(s) 1915
Fnu4HI GCNGC 5 cut(s) 100, 547, 1360, 2135, 2805
Fsp4HI GCNGC 5 cut(s) 100, 547, 1360, 2135, 2805
FspBI CTAG 8 cut(s) 273, 504, 797, 1290, 1323, 1563, 1694, 2495
GlaI GCGC 1 cut(s) 217
GluI GCNGC 5 cut(s) 100, 547, 1360, 2135, 2805
HaeII RGCGCY 1 cut(s) 219
HaeIII GGCC 8 cut(s) 99, 983, 1033, 1108, 1646, 2050, 2137, 2560
HapII CCGG 4 cut(s) 373, 1575, 2567, 2679
HgaI GACGC 1 cut(s) 33
HhaI GCGC 1 cut(s) 218
Hin1I GRCGYC 1 cut(s) 216
Hin6I GCGC 1 cut(s) 216
HinP1I GCGC 1 cut(s) 216
HincII GTYRAC 3 cut(s) 669, 2476, 2725
HindII GTYRAC 3 cut(s) 669, 2476, 2725
HpaI GTTAAC 1 cut(s) 669
HpaII CCGG 4 cut(s) 373, 1575, 2567, 2679
HphI GGTGA 5 cut(s) 1262, 1504, 1874, 2557, 2744
Hpy166II GTNNAC 7 cut(s) 235, 669, 926, 1916, 2476, 2608, 2725
Hpy8I GTNNAC 7 cut(s) 235, 669, 926, 1916, 2476, 2608, 2725
HpyCH4III ACNGT 5 cut(s) 250, 515, 1811, 2480, 2716
HpyF10VI GCNNNNNNNGC 2 cut(s) 1228, 2285
HpyF3I CTNAG 9 cut(s) 453, 906, 1005, 1469, 1498, 1545, 1714, 1789, 2170
Hsp92I GRCGYC 1 cut(s) 216
HspAI GCGC 1 cut(s) 216
KasI GGCGCC 1 cut(s) 215
Ksp22I TGATCA 1 cut(s) 72
KspAI GTTAAC 1 cut(s) 669
LmnI GCTCC 5 cut(s) 910, 1588, 1930, 2472, 2681
Lsp1109I GCAGC 2 cut(s) 533, 2791
MaeI CTAG 8 cut(s) 273, 504, 797, 1290, 1323, 1563, 1694, 2495
MaeIII GTNAC 8 cut(s) 353, 509, 637, 859, 1250, 1600, 1940, 2513
MbiI CCGCTC 2 cut(s) 1359, 2134
MfeI CAATTG 1 cut(s) 1890
MflI RGATCY 4 cut(s) 552, 781, 1071, 2238
Mly113I GGCGCC 1 cut(s) 216
MlyI GAGTC 7 cut(s) 400, 580, 875, 1088, 1577, 1937, 2050
MmeI TCCRAC 1 cut(s) 2108
Mph1103I ATGCAT 1 cut(s) 1660
MroXI GAANNNNTTC 2 cut(s) 762, 2739
MseI TTAA 5 cut(s) 668, 743, 1803, 2018, 2771
MspCI CTTAAG 1 cut(s) 742
MspI CCGG 4 cut(s) 373, 1575, 2567, 2679
MspR9I CCNGG 9 cut(s) 109, 422, 468, 1029, 1404, 1575, 1749, 1957, 2046
MunI CAATTG 1 cut(s) 1890
Mva1269I GAATGC 4 cut(s) 610, 1171, 1660, 2841
MvaI CCWGG 8 cut(s) 109, 422, 468, 1029, 1404, 1749, 1957, 2046
MvnI CGCG 1 cut(s) 1629
MwoI GCNNNNNNNGC 2 cut(s) 1228, 2285
NarI GGCGCC 1 cut(s) 216
NciI CCSGG 1 cut(s) 1575
NlaIV GGNNCC 4 cut(s) 217, 237, 465, 972
NmuCI GTSAC 3 cut(s) 637, 1250, 1940
NruI TCGCGA 1 cut(s) 1629
NsiI ATGCAT 1 cut(s) 1660
NspI RCATGY 2 cut(s) 1662, 2099
PaeI GCATGC 1 cut(s) 1662
PagI TCATGA 2 cut(s) 568, 654
PaqCI CACCTGC 1 cut(s) 1475
PciI ACATGT 1 cut(s) 2095
PcsI WCGNNNNNNNCGW 1 cut(s) 928
PctI GAATGC 4 cut(s) 610, 1171, 1660, 2841
PdmI GAANNNNTTC 2 cut(s) 762, 2739
PfeI GAWTC 8 cut(s) 658, 824, 848, 1049, 1373, 1531, 1852, 2258
PflMI CCANNNNNTGG 3 cut(s) 427, 1090, 2656
PfoI TCCNGGA 1 cut(s) 1573
PkrI GCNGC 5 cut(s) 101, 548, 1361, 2136, 2806
Ple19I CGATCG 1 cut(s) 1633
PleI GAGTC 7 cut(s) 400, 580, 874, 1087, 1577, 1937, 2049
PluTI GGCGCC 1 cut(s) 219
PpsI GAGTC 7 cut(s) 400, 580, 874, 1087, 1577, 1937, 2049
PscI ACATGT 1 cut(s) 2095
PshAI GACNNNNGTC 1 cut(s) 590
PshBI ATTAAT 1 cut(s) 1803
Psp6I CCWGG 8 cut(s) 107, 420, 466, 1027, 1402, 1747, 1955, 2044
PspGI CCWGG 8 cut(s) 107, 420, 466, 1027, 1402, 1747, 1955, 2044
PspN4I GGNNCC 4 cut(s) 217, 237, 465, 972
PspPI GGNCC 7 cut(s) 235, 385, 1031, 1106, 2048, 2647, 2692
PsrI GAACNNNNNNTAC 2 cut(s) 2208, 2240
PstI CTGCAG 1 cut(s) 2238
PsuI RGATCY 4 cut(s) 552, 781, 1071, 2238
PvuI CGATCG 1 cut(s) 1633
RruI TCGCGA 1 cut(s) 1629
RsaI GTAC 4 cut(s) 157, 1550, 1761, 2299
RsaNI GTAC 4 cut(s) 156, 1549, 1760, 2298
SaqAI TTAA 5 cut(s) 668, 743, 1803, 2018, 2771
SatI GCNGC 5 cut(s) 100, 547, 1360, 2135, 2805
Sau96I GGNCC 7 cut(s) 235, 385, 1031, 1106, 2048, 2647, 2692
SchI GAGTC 7 cut(s) 400, 580, 875, 1088, 1577, 1937, 2050
ScrFI CCNGG 9 cut(s) 109, 422, 468, 1029, 1404, 1575, 1749, 1957, 2046
SfcI CTRYAG 2 cut(s) 2211, 2234
SfoI GGCGCC 1 cut(s) 217
SinI GGWCC 4 cut(s) 235, 385, 2647, 2692
SmlI CTYRAG 4 cut(s) 734, 742, 887, 960
SmoI CTYRAG 4 cut(s) 734, 742, 887, 960
SphI GCATGC 1 cut(s) 1662
SsiI CCGC 3 cut(s) 100, 1359, 2134
SspDI GGCGCC 1 cut(s) 215
SspMI CTAG 8 cut(s) 273, 504, 797, 1290, 1323, 1563, 1694, 2495
StyD4I CCNGG 9 cut(s) 107, 420, 466, 1027, 1402, 1573, 1747, 1955, 2044
StyI CCWWGG 5 cut(s) 167, 852, 1521, 1562, 2531
TaaI ACNGT 5 cut(s) 250, 515, 1811, 2480, 2716
TaqI TCGA 3 cut(s) 91, 1633, 2757
TaqII GACCGA 1 cut(s) 1980
TatI WGTACW 3 cut(s) 1548, 1759, 2297
TauI GCSGC 3 cut(s) 102, 1362, 2137
TfiI GAWTC 8 cut(s) 658, 824, 848, 1049, 1373, 1531, 1852, 2258
Tru1I TTAA 5 cut(s) 668, 743, 1803, 2018, 2771
Tru9I TTAA 5 cut(s) 668, 743, 1803, 2018, 2771
TscAI CASTG 5 cut(s) 255, 313, 1816, 2290, 2568
TseFI GTSAC 3 cut(s) 637, 1250, 1940
TseI GCWGC 2 cut(s) 546, 2804
Tsp45I GTSAC 3 cut(s) 637, 1250, 1940
TspRI CASTG 5 cut(s) 255, 313, 1816, 2290, 2568
Van91I CCANNNNNTGG 3 cut(s) 427, 1090, 2656
Vha464I CTTAAG 1 cut(s) 742
VpaK11BI GGWCC 4 cut(s) 235, 385, 2647, 2692
VspI ATTAAT 1 cut(s) 1803
XagI CCTNNNNNAGG 1 cut(s) 1525
XapI RAATTY 3 cut(s) 1207, 1384, 1407
XbaI TCTAGA 1 cut(s) 503
XceI RCATGY 2 cut(s) 1662, 2099
XmaJI CCTAGG 1 cut(s) 1562
XmiI GTMKAC 1 cut(s) 1915
XmnI GAANNNNTTC 2 cut(s) 762, 2739
XspI CTAG 8 cut(s) 273, 504, 797, 1290, 1323, 1563, 1694, 2495
Zsp2I ATGCAT 1 cut(s) 1660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.