Rroxscaffold_4G00300530

Protein of unknown function (DUF3741)

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
20965413 .. 20970533
5121 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00300530.1

Sequence Viewer

Length: 2865 bp
ATGGCAAAGAAGTCCCAGAGACGCTCTGTGCGGTATGAGAAAGACCAGTTAGGCTGTATGTGGGGTTTGATTAACATCTTTGATTTTCGGCACGGCCGCCCCACCTGGAAGCTGATCTCTGATAGGAGGCATGGAAGCAAGCAAGCTCTTGGTACTGGGTCTCCAAGGAACAAGTTTGGGGTGTTGAGTGGTTTGGATGAGAACTTTCAAGGCACCCTTGAAAGCGATGTGGACGCAACAGTAATGGTGGCAGGCGATGATTGTAAGCCTAGTGTGAAGAAACTTATGGAAGAAGAAATGTCCAGTGAGCAGGACATGAGGAAAGAGATCAGCACTGATGTGGTGAGTAACCAGACTGATGCAAGCCAGACCAGAAAGGATAAAAAAAGAACAAAGAAGACTCGTAAGAAAAGCCGGGACATGGACACCTATGATTTGAACGGTTCTGAGACTTTGGAGCCTGGATGCTCATGTAATCAGAAACAAGAGCACAAATCTAGAAGTAACCGTGGCATAGATGAGATAATGGAAGAGGTATGCTGCCAGATCCATCAAAAGTATATAAATAGTGTGAATCATGATCTGAATGGTGAGACTCCTGTCAGATCAAACTACAAGCATTCTGATTTTGAAGAGAAATTATGTGTGACAATCAAGGAGTTCATGAATCAGAAGTTTGCTGATGGGAAGCATCTCACAGAAGATCAGAAAATCCAGCACTTTAGAGAACTAATGGATGCACTTGAGACCTTAAGTTCAGATGAGGAATTGTTTCTGAAACTCTTACAAGATCCAAACTCGCTGCTGGCAAAGTATGTCTTGAACTTGCAGGATTCTCAAATAGAGAAAGATAAAGAATCCAAGGCTGTTGCAGAGTCCAACTCGACAGAGAAACTTGAGGATTCAAAACAACCTGACGAGCTTGTCATCCGTAAACAGCGAAAATTTTTCAGGAGAAAGAGCAAGCCTCAAGAAAGAGACCCAGCTGAGGCCAATGAGAATTTTGAAGCTTCAAAGAGAATTGTCATTTTGAAGCCTGGGCCTACAGTTTTACGGGATTCTGATACTGAAAGTAACAAGATCCCAGAGTCCCATTATATAGTAAGAAGTAAGGGGCCAAATGAAAAAATTGGCTCTCACTTTTTTCTTTCTGAAATAAAGAGGAAACTGAAGAATGCTATGGGAAAGCAACAGCATGGGGTATCTGCTATTGGAAATTCAAACAGATTGCCCTATGGGCATCAAAATGTGGAAGATGGTGACAGAGGAATTGTTAAGGAAAAGTTTGGAAGTTCTCCTAGTAAAGATCACTTCTACATGGAAAGAATTGCTAAACCTTCTGGTGCTATCAAGAGACCAGACAAGAGTGGCAAATTGAAAGAATCTGAAATGAATATGATACATGAAGATCCAGGTATTCCTAATCAAAGGGTATCTAACATCTACATTGAAGCCAAGAAACATCTCTCTGAGATGCTGAGCAATGGAGATGCAAGTGTAGATTTTGTGGGACAACATTTTCCCAAAACCTTGGGAAGGATTCTCTCTCTTCCTGAGTACAATGTGTCTCCTAGGGGCAGTCCCGGAAGGGACTCGGAGCTTGGGTTTGTTACTGCACAAATGAGATTATCTCCTCGCGACAGAGTTTGGAAGGCCAATGAGAATGCAGGGTCTCCTAAGCAAGAGAAAAATGTCAGTCCTCTAGGTCAAGTAGCACAAAACTTAGAGAACAAGCTATCTGTTTCTGACAACAACACTGACTGTGAAGTACAGCCTCCTAATTCCCTACCAAGCACCTCAGTTGATTTGAAGGACAACTGTTTTCCTAGTGAAGCAGAAGATGTCACGATTAAAGACAAGATGAATCCTGAAGGTGATATGGAGATTGCAAAAGAGATTGAAATTGTAGCTGAGGAAGAAGAGAGTGTACTGGATGCTTCTTCTGAACAGAGTTGCTCTTCCATTGCCAGGGATGACCAAAGTGGCGATGAGATTGAAATTGTGGATGATAAAAGAGATTCAGAATGCTGGAAACGGGATTCTTATGAAGAGAGTCCAGGGCCATCTGCTTCATTAGCATCCCCATCCAGCTCTCCAACCACCAAATATGTTGAATGTATGGACATTGCCATCGGCATACCAGAGCGGCCAAGTCCTGTTTCAGTTCTTGATCCACTATTCTCAGATGATGAGATCAGCCCTTCAAAAAGCATTTCTCAGTCTGAGCTACCTATACAACCCCTACGGATCATATTTGAAGATCATGACTCTTCAGCCATAGATGAAGCTAACAATGCAAAAACTCGTACAGAAGACAAGGAACTAATATCAGATTTTGTAAAAGCAGTTATGCAAGCCTCCTGCTTCAACTGGGATGACTTCTGCATGAAGTGGCTTTCGTCAGACCAACTTATTGAACCATCATTGTGTGATGATGTAGAATTTTGTCCTAACCTGCTCTGCTATGACCAGAAGCTCCTTTTTGACTGTATCAATGAAGTTCTAGTGGAGGTCTGTGGGCGTTACTATGGTTGCTTCCCTTGGGTATCATCAGTGAAACCTATAAGGCCAGTGCCGGATATGAAGACTGCTATACATGAGGTTTGGGTAGAAGTTTACTGGCATCTCAGTCCGCTTCCATTGCCTCGTACTTTGGACCAGATAGTGACAAAAGACTTGTCAAGAACTGGATCGTGGATGGACCTTCGATTTGATACTGAAACCATTGGTGTTGACATGGGTGAAGCAATTCTCCAAGACTTGATCGAAGAAATCATATTAAGCTATGCAGATGGAAGTCCCGAAAGTGAAGATGCTATAGTCCCTGATGACTTGAAGGAAACAGAGAGCATTCTCAACCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

954

Amino Acids

107.72

Weight (kDa)

5.02

Isoelectric Point (pI)

56.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF3741 PF12552 223 - 267 6.8e-19 Protein of unknown function (DUF3741)
DUF4378 PF14309 778 - 924 8.4e-36 Domain of unknown function (DUF4378)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 923
Acc36I ACCTGC 1 cut(s) 2463
AccB1I GGYRCC 1 cut(s) 212
AccBSI CCGCTC 1 cut(s) 2146
AccII CGCG 1 cut(s) 1638
AciI CCGC 4 cut(s) 31, 97, 2146, 2633
AclWI GGATC 7 cut(s) 541, 785, 1075, 1403, 2165, 2255, 2698
AcoI YGGCCR 2 cut(s) 94, 2147
AcsI RAATTY 4 cut(s) 944, 1000, 1216, 2441
AcuI CTGAAG 3 cut(s) 1190, 1890, 2256
AfaI GTAC 6 cut(s) 154, 1559, 1770, 1929, 2308, 2650
AfiI CCNNNNNNNGG 4 cut(s) 421, 988, 1536, 1968
AflII CTTAAG 1 cut(s) 751
AjnI CCWGG 6 cut(s) 104, 460, 1036, 1411, 1967, 2056
AjuI GAANNNNNNNTTGG 2 cut(s) 2143, 2175
AleI CACNNNNGTG 1 cut(s) 338
Alw21I GWGCWC 1 cut(s) 492
Alw26I GTCTC 9 cut(s) 13, 165, 443, 587, 740, 972, 1348, 1572, 1677
AlwI GGATC 7 cut(s) 541, 785, 1075, 1403, 2165, 2255, 2698
AoxI GGCC 8 cut(s) 94, 990, 1040, 1115, 1653, 2060, 2147, 2567
ApeKI GCWGC 2 cut(s) 540, 802
ApoI RAATTY 4 cut(s) 944, 1000, 1216, 2441
ArsI GACNNNNNNTTYG 4 cut(s) 2663, 2693, 2695, 2725
Asp700I GAANNNNTTC 2 cut(s) 771, 2748
AspA2I CCTAGG 1 cut(s) 1571
AspS9I GGNCC 5 cut(s) 1040, 1115, 2060, 2656, 2701
AsuC2I CCSGG 2 cut(s) 416, 1584
AsuHPI GGTGA 5 cut(s) 355, 602, 1271, 1886, 2753
AvaII GGWCC 2 cut(s) 2656, 2701
AvrII CCTAGG 1 cut(s) 1571
BanI GGYRCC 1 cut(s) 212
BarI GAAGNNNNNNTAC 2 cut(s) 1911, 1943
BbsI GAAGAC 3 cut(s) 404, 2319, 2591
Bbv12I GWGCWC 1 cut(s) 492
BbvCI CCTCAGC 2 cut(s) 987, 1911
BbvI GCAGC 2 cut(s) 527, 789
BccI CCATC 9 cut(s) 558, 677, 1250, 2071, 2092, 2138, 2428, 2692, 2786
BceAI ACGGC 1 cut(s) 109
BciT130I CCWGG 6 cut(s) 106, 462, 1038, 1413, 1969, 2058
BcnI CCSGG 2 cut(s) 416, 1584
BcoDI GTCTC 9 cut(s) 13, 165, 443, 587, 740, 972, 1348, 1572, 1677
BfaI CTAG 7 cut(s) 270, 498, 1299, 1572, 1703, 1827, 2504
BfmI CTRYAG 2 cut(s) 1044, 2817
BfrI CTTAAG 1 cut(s) 751
BfuAI ACCTGC 1 cut(s) 2463
BglI GCCNNNNNGGC 1 cut(s) 1237
BisI GCNGC 4 cut(s) 97, 541, 803, 2147
BlnI CCTAGG 1 cut(s) 1571
BlpI GCTNAGC 1 cut(s) 1478
BlsI GCNGC 4 cut(s) 98, 542, 804, 2148
Bme1390I CCNGG 8 cut(s) 106, 416, 462, 1038, 1413, 1584, 1969, 2058
Bme18I GGWCC 2 cut(s) 2656, 2701
BmgT120I GGNCC 5 cut(s) 1040, 1115, 2060, 2656, 2701
BmiI GGNNCC 3 cut(s) 214, 459, 1116
BmrFI CCNGG 8 cut(s) 106, 416, 462, 1038, 1413, 1584, 1969, 2058
BmrI ACTGGG 2 cut(s) 165, 2380
BmuI ACTGGG 2 cut(s) 165, 2380
BoxI GACNNNNGTC 1 cut(s) 599
BpiI GAAGAC 3 cut(s) 404, 2319, 2591
BplI GAGNNNNNCTC 6 cut(s) 866, 898, 952, 984, 1615, 1647
Bpu10I CCTNAGC 3 cut(s) 987, 1677, 1911
Bpu1102I GCTNAGC 1 cut(s) 1478
BpuEI CTTGAG 3 cut(s) 764, 917, 954
BpuMI CCSGG 2 cut(s) 416, 1584
BsaBI GATNNNNATC 1 cut(s) 74
BsaI GGTCTC 5 cut(s) 165, 740, 972, 1348, 1677
BsaJI CCNNGG 9 cut(s) 164, 508, 861, 1037, 1530, 1571, 1968, 2057, 2540
BsaXI ACNNNNNCTCC 4 cut(s) 145, 175, 1589, 1619
Bsc4I CCNNNNNNNGG 4 cut(s) 421, 988, 1536, 1968
Bse1I ACTGG 8 cut(s) 46, 160, 303, 1935, 2375, 2570, 2624, 2692
Bse3DI GCAATG 4 cut(s) 1489, 1962, 2124, 2639
Bse8I GATNNNNATC 1 cut(s) 74
BseBI CCWGG 6 cut(s) 106, 462, 1038, 1413, 1969, 2058
BseDI CCNNGG 9 cut(s) 164, 508, 861, 1037, 1530, 1571, 1968, 2057, 2540
BseJI GATNNNNATC 1 cut(s) 74
BseLI CCNNNNNNNGG 4 cut(s) 421, 988, 1536, 1968
BseMI GCAATG 4 cut(s) 1489, 1962, 2124, 2639
BseNI ACTGG 8 cut(s) 46, 160, 303, 1935, 2375, 2570, 2624, 2692
BseRI GAGGAG 1 cut(s) 1623
BseX3I CGGCCG 1 cut(s) 94
BseXI GCAGC 2 cut(s) 527, 789
BseYI CCCAGC 1 cut(s) 982
BsgI GTGCAG 1 cut(s) 1599
Bsh1236I CGCG 1 cut(s) 1638
Bsh1285I CGRYCG 1 cut(s) 97
BshFI GGCC 8 cut(s) 96, 992, 1042, 1117, 1655, 2062, 2149, 2569
BshNI GGYRCC 1 cut(s) 212
BsiEI CGRYCG 1 cut(s) 97
BsiHKAI GWGCWC 1 cut(s) 492
BsiSI CCGG 3 cut(s) 415, 1584, 2576
BslFI GGGAC 7 cut(s) 431, 1075, 1524, 1566, 1604, 2784, 2807
BslI CCNNNNNNNGG 4 cut(s) 421, 988, 1536, 1968
BsmAI GTCTC 9 cut(s) 13, 165, 443, 587, 740, 972, 1348, 1572, 1677
BsmBI CGTCTC 1 cut(s) 13
BsmFI GGGAC 7 cut(s) 431, 1075, 1524, 1566, 1604, 2784, 2807
BsmI GAATGC 5 cut(s) 619, 1180, 1669, 2030, 2850
BsnI GGCC 8 cut(s) 96, 992, 1042, 1117, 1655, 2062, 2149, 2569
Bso31I GGTCTC 5 cut(s) 165, 740, 972, 1348, 1677
Bsp1286I GDGCHC 1 cut(s) 492
Bsp1720I GCTNAGC 1 cut(s) 1478
Bsp68I TCGCGA 1 cut(s) 1638
BspACI CCGC 4 cut(s) 31, 97, 2146, 2633
BspANI GGCC 8 cut(s) 96, 992, 1042, 1117, 1655, 2062, 2149, 2569
BspFNI CGCG 1 cut(s) 1638
BspHI TCATGA 3 cut(s) 577, 663, 2263
BspLI GGNNCC 3 cut(s) 214, 459, 1116
BspMI ACCTGC 1 cut(s) 2463
BspPI GGATC 7 cut(s) 541, 785, 1075, 1403, 2165, 2255, 2698
BspQI GCTCTTC 1 cut(s) 1963
BspT107I GGYRCC 1 cut(s) 212
BspTI CTTAAG 1 cut(s) 751
BspTNI GGTCTC 5 cut(s) 165, 740, 972, 1348, 1677
BsrBI CCGCTC 1 cut(s) 2146
BsrDI GCAATG 4 cut(s) 1489, 1962, 2124, 2639
BsrI ACTGG 8 cut(s) 46, 160, 303, 1935, 2375, 2570, 2624, 2692
BssECI CCNNGG 9 cut(s) 164, 508, 861, 1037, 1530, 1571, 1968, 2057, 2540
BssT1I CCWWGG 5 cut(s) 164, 861, 1530, 1571, 2540
Bst2UI CCWGG 6 cut(s) 106, 462, 1038, 1413, 1969, 2058
Bst4CI ACNGT 7 cut(s) 241, 443, 509, 1048, 1763, 1820, 2489
Bst6I CTCTTC 7 cut(s) 525, 627, 1554, 1914, 1963, 2043, 2275
BstAFI CTTAAG 1 cut(s) 751
BstC8I GCNNGC 7 cut(s) 140, 144, 253, 364, 807, 965, 2355
BstDSI CCRYGG 1 cut(s) 508
BstENI CCTNNNNNAGG 1 cut(s) 1534
BstFNI CGCG 1 cut(s) 1638
BstMAI GTCTC 9 cut(s) 13, 165, 443, 587, 740, 972, 1348, 1572, 1677
BstMCI CGRYCG 1 cut(s) 97
BstMWI GCNNNNNNNGC 4 cut(s) 1237, 2075, 2294, 2641
BstNI CCWGG 6 cut(s) 106, 462, 1038, 1413, 1969, 2058
BstPAI GACNNNNGTC 1 cut(s) 599
BstSCI CCNGG 8 cut(s) 104, 414, 460, 1036, 1411, 1582, 1967, 2056
BstSFI CTRYAG 2 cut(s) 1044, 2817
BstUI CGCG 1 cut(s) 1638
BstV1I GCAGC 2 cut(s) 527, 789
BstV2I GAAGAC 3 cut(s) 404, 2319, 2591
BstX2I RGATCY 4 cut(s) 546, 790, 1080, 1408
BstXI CCANNNNNNTGG 1 cut(s) 1531
BstYI RGATCY 4 cut(s) 546, 790, 1080, 1408
BstZI CGGCCG 1 cut(s) 94
BsuRI GGCC 8 cut(s) 96, 992, 1042, 1117, 1655, 2062, 2149, 2569
BtgI CCRYGG 1 cut(s) 508
BtgZI GCGATG 3 cut(s) 240, 270, 2001
BtsIMutI CAGTG 5 cut(s) 310, 333, 1755, 2559, 2577
BtuMI TCGCGA 1 cut(s) 1638
BveI ACCTGC 1 cut(s) 2463
Cac8I GCNNGC 7 cut(s) 140, 144, 253, 364, 807, 965, 2355
CciI TCATGA 3 cut(s) 577, 663, 2263
Cfr13I GGNCC 5 cut(s) 1040, 1115, 2060, 2656, 2701
CseI GACGC 2 cut(s) 30, 242
Csp6I GTAC 6 cut(s) 153, 1558, 1769, 1928, 2307, 2649
CviQI GTAC 6 cut(s) 153, 1558, 1769, 1928, 2307, 2649
DrdI GACNNNNNNGTC 1 cut(s) 923
DseDI GACNNNNNNGTC 1 cut(s) 923
EaeI YGGCCR 2 cut(s) 94, 2147
EagI CGGCCG 1 cut(s) 94
Eam1104I CTCTTC 7 cut(s) 525, 627, 1554, 1914, 1963, 2043, 2275
EarI CTCTTC 7 cut(s) 525, 627, 1554, 1914, 1963, 2043, 2275
EclXI CGGCCG 1 cut(s) 94
Eco130I CCWWGG 5 cut(s) 164, 861, 1530, 1571, 2540
Eco31I GGTCTC 5 cut(s) 165, 740, 972, 1348, 1677
Eco47I GGWCC 2 cut(s) 2656, 2701
Eco52I CGGCCG 1 cut(s) 94
Eco57I CTGAAG 3 cut(s) 1190, 1890, 2256
EcoNI CCTNNNNNAGG 1 cut(s) 1534
EcoRII CCWGG 6 cut(s) 104, 460, 1036, 1411, 1967, 2056
EcoT14I CCWWGG 5 cut(s) 164, 861, 1530, 1571, 2540
ErhI CCWWGG 5 cut(s) 164, 861, 1530, 1571, 2540
Esp3I CGTCTC 1 cut(s) 13
FalI AAGNNNNNCTT 4 cut(s) 201, 233, 803, 835
FaqI GGGAC 7 cut(s) 431, 1075, 1524, 1566, 1604, 2784, 2807
Fnu4HI GCNGC 4 cut(s) 97, 541, 803, 2147
Fsp4HI GCNGC 4 cut(s) 97, 541, 803, 2147
FspBI CTAG 7 cut(s) 270, 498, 1299, 1572, 1703, 1827, 2504
GluI GCNGC 4 cut(s) 97, 541, 803, 2147
GsaI CCCAGC 1 cut(s) 986
HaeIII GGCC 8 cut(s) 96, 992, 1042, 1117, 1655, 2062, 2149, 2569
HapII CCGG 3 cut(s) 415, 1584, 2576
HgaI GACGC 2 cut(s) 30, 242
HincII GTYRAC 1 cut(s) 2734
HindII GTYRAC 1 cut(s) 2734
HindIII AAGCTT 1 cut(s) 1008
HpaII CCGG 3 cut(s) 415, 1584, 2576
HphI GGTGA 5 cut(s) 355, 602, 1271, 1886, 2753
Hpy166II GTNNAC 5 cut(s) 232, 935, 1928, 2617, 2734
Hpy8I GTNNAC 5 cut(s) 232, 935, 1928, 2617, 2734
HpyAV CCTTC 9 cut(s) 1347, 1530, 1581, 1645, 1804, 1865, 2211, 2714, 2830
HpyCH4III ACNGT 7 cut(s) 241, 443, 509, 1048, 1763, 1820, 2489
HpyF10VI GCNNNNNNNGC 4 cut(s) 1237, 2075, 2294, 2641
LguI GCTCTTC 1 cut(s) 1963
LmnI GCTCC 3 cut(s) 457, 1597, 2481
Lsp1109I GCAGC 2 cut(s) 527, 789
MaeI CTAG 7 cut(s) 270, 498, 1299, 1572, 1703, 1827, 2504
MaeIII GTNAC 9 cut(s) 347, 503, 646, 1073, 1259, 1609, 1843, 2522, 2665
MbiI CCGCTC 1 cut(s) 2146
MflI RGATCY 4 cut(s) 546, 790, 1080, 1408
MhlI GDGCHC 1 cut(s) 492
MlyI GAGTC 7 cut(s) 394, 589, 884, 1097, 1586, 2062, 2261
MmeI TCCRAC 2 cut(s) 903, 2120
MroXI GAANNNNTTC 2 cut(s) 771, 2748
MseI TTAA 5 cut(s) 72, 752, 1275, 1851, 2780
MslI CAYNNNNRTG 3 cut(s) 338, 1245, 2425
MspA1I CMGCKG 1 cut(s) 986
MspCI CTTAAG 1 cut(s) 751
MspI CCGG 3 cut(s) 415, 1584, 2576
MspR9I CCNGG 8 cut(s) 106, 416, 462, 1038, 1413, 1584, 1969, 2058
Mva1269I GAATGC 5 cut(s) 619, 1180, 1669, 2030, 2850
MvaI CCWGG 6 cut(s) 106, 462, 1038, 1413, 1969, 2058
MvnI CGCG 1 cut(s) 1638
MwoI GCNNNNNNNGC 4 cut(s) 1237, 2075, 2294, 2641
NciI CCSGG 2 cut(s) 416, 1584
NlaIV GGNNCC 3 cut(s) 214, 459, 1116
NmuCI GTSAC 4 cut(s) 646, 1259, 1843, 2665
NruI TCGCGA 1 cut(s) 1638
OliI CACNNNNGTG 1 cut(s) 338
PagI TCATGA 3 cut(s) 577, 663, 2263
PciSI GCTCTTC 1 cut(s) 1963
PctI GAATGC 5 cut(s) 619, 1180, 1669, 2030, 2850
PdmI GAANNNNTTC 2 cut(s) 771, 2748
PfoI TCCNGGA 1 cut(s) 1582
PkrI GCNGC 4 cut(s) 98, 542, 804, 2148
PleI GAGTC 7 cut(s) 394, 589, 883, 1096, 1586, 2061, 2261
PpsI GAGTC 7 cut(s) 394, 589, 883, 1096, 1586, 2061, 2261
PshAI GACNNNNGTC 1 cut(s) 599
Psp6I CCWGG 6 cut(s) 104, 460, 1036, 1411, 1967, 2056
PspFI CCCAGC 1 cut(s) 982
PspGI CCWGG 6 cut(s) 104, 460, 1036, 1411, 1967, 2056
PspN4I GGNNCC 3 cut(s) 214, 459, 1116
PspPI GGNCC 5 cut(s) 1040, 1115, 2060, 2656, 2701
PsuI RGATCY 4 cut(s) 546, 790, 1080, 1408
PvuII CAGCTG 1 cut(s) 986
RruI TCGCGA 1 cut(s) 1638
RsaI GTAC 6 cut(s) 154, 1559, 1770, 1929, 2308, 2650
RsaNI GTAC 6 cut(s) 153, 1558, 1769, 1928, 2307, 2649
RseI CAYNNNNRTG 3 cut(s) 338, 1245, 2425
SapI GCTCTTC 1 cut(s) 1963
SaqAI TTAA 5 cut(s) 72, 752, 1275, 1851, 2780
SatI GCNGC 4 cut(s) 97, 541, 803, 2147
Sau96I GGNCC 5 cut(s) 1040, 1115, 2060, 2656, 2701
SchI GAGTC 7 cut(s) 394, 589, 884, 1097, 1586, 2062, 2261
ScrFI CCNGG 8 cut(s) 106, 416, 462, 1038, 1413, 1584, 1969, 2058
SduI GDGCHC 1 cut(s) 492
SfcI CTRYAG 2 cut(s) 1044, 2817
SinI GGWCC 2 cut(s) 2656, 2701
SmiMI CAYNNNNRTG 3 cut(s) 338, 1245, 2425
SmlI CTYRAG 4 cut(s) 743, 751, 896, 969
SmoI CTYRAG 4 cut(s) 743, 751, 896, 969
SsiI CCGC 4 cut(s) 31, 97, 2146, 2633
SspMI CTAG 7 cut(s) 270, 498, 1299, 1572, 1703, 1827, 2504
StyD4I CCNGG 8 cut(s) 104, 414, 460, 1036, 1411, 1582, 1967, 2056
StyI CCWWGG 5 cut(s) 164, 861, 1530, 1571, 2540
TaaI ACNGT 7 cut(s) 241, 443, 509, 1048, 1763, 1820, 2489
TaqI TCGA 3 cut(s) 884, 2707, 2766
TatI WGTACW 3 cut(s) 1557, 1768, 1927
TauI GCSGC 2 cut(s) 99, 2149
Tru1I TTAA 5 cut(s) 72, 752, 1275, 1851, 2780
Tru9I TTAA 5 cut(s) 72, 752, 1275, 1851, 2780
TscAI CASTG 5 cut(s) 310, 340, 1762, 2559, 2577
TseFI GTSAC 4 cut(s) 646, 1259, 1843, 2665
TseI GCWGC 2 cut(s) 540, 802
Tsp45I GTSAC 4 cut(s) 646, 1259, 1843, 2665
TspGWI ACGGA 2 cut(s) 920, 2260
TspRI CASTG 5 cut(s) 310, 340, 1762, 2559, 2577
Vha464I CTTAAG 1 cut(s) 751
VpaK11BI GGWCC 2 cut(s) 2656, 2701
XagI CCTNNNNNAGG 1 cut(s) 1534
XapI RAATTY 4 cut(s) 944, 1000, 1216, 2441
XbaI TCTAGA 1 cut(s) 497
XmaJI CCTAGG 1 cut(s) 1571
XmnI GAANNNNTTC 2 cut(s) 771, 2748
XspI CTAG 7 cut(s) 270, 498, 1299, 1572, 1703, 1827, 2504
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.