Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0004678

Physical Location & Seq

Genomic Coordinates Reverse (-)

16447577 .. 16451435

Gene Structure 3859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1060800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2625 bp

ATGCTTGTAAATCCAGTGAGAAAACTCATGGAAGAAGAAATGTCCAGTGAGCAGGGCATGAAGAAGGAGATAAGCAATCATGCAGTGGAAACTAAACAGTCAGAATCAAGCCAGAACAGAAAGGACCAGAAGAAAACAAAGAGGACTCGCAAGAAAAGCCGAGACATGGACACCCATATTATGAATGCTTCAGAGAACTCGGAATCTGGATGCTCTTGCAATCAGAATCCGGAGCAGAAAACTAGAAGTAATGTTGGAATGGATGAGATAATGGAAGAGGTATGTTGCCAGATCCATCAGAAATATATCAATTGCGCGAATCATGACGTGAATGGTGAAGCTCCTGTGGAACCAAGCGACAAGCATTCTGATTTTGAAGAGAAATTATGTGTGGCAATCAAGGAGTTCATGAATCATAAGTTAGCAGATGGGAAACATCTTACGGAAGATCAGAAAGTCCACCACTTCAAAGAGCTAATGGATGCGCTCGAGGTCTTAAGTTCAGATGAGGAATTGTTTCTGAAACTTTTGCAGGATCCAAACTCACTGTTGGCAAAACATGTCCAAAAGTTCCAGGATGCTCAGATAGAGAAAGATGAAGAATACGCTTCCTTTGCAGAGTCCAAGTTGTCGGAACAGAAGCTTGGTGATGTAAAACAATCTGAGGAGCTTGTCAACCGTAAACAGCGGTACTTTTTCAGGAGAAAGGTCAAGCCTCAGGAAAGAAACCCAAGTAAGGAAAATGAGGATTCTGAAGCTTCAAAGAGAATCGTCATTTTGAAGCCTGGGCATCCAGTGTTACGAAATTCTGAAACTGGAGATAGTGCATCCCCAGAATCCCATAACATTGTAAGAAATAAAGGGCCAAGTGAAAGAGTTGGTTCCCACTTTTTTCTCTCAGAAATAAAAAGGAAACTAAAGAATGCAATGGGAAAGCAACACCATGGGGCATCTACTGTTGGAAGTTCAAACAGATTGCCTTATGGGCGTCAAAATTCGGGAGGTAGTGACAAAGGAATTGGTAAGGAAAAACTTAGAAGTTCCCCTGGTAAAGAGCATTTCTACATTGAAAGAATTGCTAAACCTTCCGGTGGTATCAAGAGGGCAGAAAAGACTGGGAAAGTGAAAGAACCTGAAGTAAGTTTGAAACATGAAAATCATGGTCTTGCGGATGAAAGGCTATCTAACCTCTACATTGAGGCCAAGAAGCATCTCTGTGAGATGCTGAGTAATGGAGATGAAGGTGTAGATATATCAAGACAGCAGTTTCCTAAATCCTTGGGAAAGATTCTTTCTCTTCCTGAGTACAACGTTTCTCCTTTTGGCAGTCCTGGAAGGGACTTGGAGCATGGCTTTGTTACCGCACAGATGAGATTGTCTGCTTATGACAAACTTTTGAAGGCCAATGAGAATACATTGTCTCCTAAGCAAGAGAAAAATGCCAGCCCTCTTGGTGAGGTAGTACACAACTTAGGGAGTCTGCCGTCTAATTCTGACAATAACCCTGATGATAAAGTACAGCCTTCTAACTCAATACCAAGCATCTCAGATAATCTGATTCAAGATAATGAAGTGGAAGAAGCCCATCCTTCCGTCGTAGATAAGAAGAATTCTGAAGGTGTCGAGATTAAAAATGGAAAAGAAATCGTTGCTTGGGAAGAAGAAATCATTGCTTGGGAAGAAGAAATTGTTGCTTGGGAAGAAGAAATTGTCTTGGATGCCCTCTCTGAACTAAGTGGTTCTTCAATCGCCATAAATGACCAAAATGATGATAAAAGAATTTCGGAATGCTTACAACAGAATTCATATGACGAAAACCCGCAATCTTCTTCATTAGCATCCCCTTCCAGCTCTTTAACCACCAAGCATGTTGAGGATTTAGAAAGTGGTATAGATACACCAGAGCGGCCAAGTCCTGTTTCAGTTCTGGAGCCACTATTCACAGAGGATGATATCAGCCCCGGGAAAACCATTTCTCGGTTTGGAGAGCTACAACCACTAAGGATCGAATTTGAAGATTATGACCCTTCAGCTGCAGAGCAAGCTAACAATGCAAAAACCTGTACAGAAGACAAGGAACTAATGTTTGATTTTGTAAAAGCAGTCATGCAAGCCTCTGTCTTCAATTGGGATGACTTCTGTATGAAGTGGCTTTCTTCTGACCAAATTATTGAGCCATCATTGTGTGATGAGGTGGAATTTTTTCCTAACCAGCTTTGCTATGACTCGAAGCTCCTTGTTGACTGTATTAATGAAGTTCTACTGGAGGTTTGTGGGCGTTATTATGGTTGCTTCCCTCGGATATCATCTGCGAAACCTAGTATAAGACCAGTACCAGATATGAAAACTGCTATAGATGAGGTCTGGATAGAAGTTTATTGGCATCTCCGTCCTCTTCCATTGCCTCGTACTTTGGACCAGATTGTCACAAAAGACATGTCAAGACCTGGAACGTGGATGGACCTTCGGTTCGATGCTGAGACCATTGGTGTTGACATGGGTGAAGCCATTCTCCAAGAATTGATGGAAGACACCATATTAAGCTATGTAGAAGGAAGTCTCGGAAGTGAAGATGTTTCAGTTAAATCTGAATCAAATGAAACAGAGAGCATTCTCAACTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378

Protein Analysis

875

Amino Acids

98.46

Weight (kDa)

5.02

Isoelectric Point (pI)

56.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3741	PF12552	138 - 182	8.8e-20	Protein of unknown function (DUF3741)
DUF4378	PF14309	696 - 844	1.2e-33	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004678)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01695 AT4G00440 AT4G00440 AT4G00440 AT4G00440 AT4G00440
fragaria_vesca	FvH4_7g14290 FvH4_7g14290 FvH4_7g14290 FvH4_7g14290 FvH4_7g14290
malus_domestica	MD01G1060800.v1.1 MD07G1136900.v1.1
prunus_persica	Prupe.2G170700_v2.0.a1 Prupe.2G170700_v2.0.a1 Prupe.2G170700_v2.0.a1 Prupe.2G170700_v2.0.a1
pyrus_communis	pycom01g09100 pycom07g13460
rosa_chinensis	RchiOBHm_Chr1g0355281
rosa_laevigata	RLG00000028164
rosa_multiflora	Rmu_sc0003115.1_g000046 Rmu_sc0004135.1_g000022
rosa_roxburghii	Rroxscaffold_4G00300530
rosa_rugosa	Rorug01G0246400 Rorug01G0246400
rosa_samantha	Rh1AG258500 Rh1BG228100 Rh1CG242200 Rh1DG255900
rosa_wichuraiana	Rw1G022820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2423
AccBSI	CCGCTC	1 cut(s)	1906
AccII	CGCG	1 cut(s)	317
AccIII	TCCGGA	1 cut(s)	229
AciI	CCGC	5 cut(s)	688, 1169, 1362, 1820, 1906
AclI	AACGTT	1 cut(s)	1311
AclWI	GGATC	4 cut(s)	286, 530, 543, 2012
AcoI	YGGCCR	1 cut(s)	1907
AcsI	RAATTY	7 cut(s)	805, 994, 1609, 1779, 1801, 2009, 2198
AcuI	CTGAAG	5 cut(s)	174, 774, 1155, 1635, 2013
AcyI	GRCGYC	1 cut(s)	988
AfaI	GTAC	7 cut(s)	692, 1307, 1464, 1518, 2065, 2334, 2410
AfiI	CCNNNNNNNGG	4 cut(s)	166, 736, 1091, 1977
AflII	CTTAAG	1 cut(s)	496
AflIII	ACRYGT	2 cut(s)	559, 2436
AjiI	CACGTC	1 cut(s)	328
AjnI	CCWGG	5 cut(s)	573, 784, 1045, 1330, 2446
AjuI	GAANNNNNNNTTGG	4 cut(s)	627, 659, 1903, 1935
AloI	GAACNNNNNNTCC	2 cut(s)	2453, 2485
Alw26I	GTCTC	4 cut(s)	156, 1425, 2474, 2564
AlwI	GGATC	4 cut(s)	286, 530, 543, 2012
Ama87I	CYCGRG	2 cut(s)	488, 1961
Aor13HI	TCCGGA	1 cut(s)	229
AoxI	GGCC	4 cut(s)	863, 1200, 1401, 1907
ApeKI	GCWGC	1 cut(s)	2033
ApoI	RAATTY	7 cut(s)	805, 994, 1609, 1779, 1801, 2009, 2198
ArsI	GACNNNNNNTTYG	4 cut(s)	2423, 2453, 2455, 2485
AseI	ATTAAT	1 cut(s)	2250
Asp700I	GAANNNNTTC	3 cut(s)	516, 2202, 2508
AspLEI	GCGC	2 cut(s)	317, 487
AspS9I	GGNCC	4 cut(s)	124, 863, 2416, 2461
AsuC2I	CCSGG	2 cut(s)	1962, 1963
AsuHPI	GGTGA	4 cut(s)	347, 659, 1466, 2513
AvaI	CYCGRG	2 cut(s)	488, 1961
AvaII	GGWCC	3 cut(s)	124, 2416, 2461
AxyI	CCTNAGG	1 cut(s)	717
BamHI	GGATCC	1 cut(s)	535
BbsI	GAAGAC	3 cut(s)	2076, 2113, 2535
BbvI	GCAGC	1 cut(s)	2020
BccI	CCATC	6 cut(s)	303, 422, 1593, 2185, 2452, 2518
BceAI	ACGGC	1 cut(s)	1468
BciT130I	CCWGG	5 cut(s)	575, 786, 1047, 1332, 2448
BcnI	CCSGG	2 cut(s)	1962, 1963
BcoDI	GTCTC	4 cut(s)	156, 1425, 2474, 2564
BfaI	CTAG	2 cut(s)	243, 2319
BfmI	CTRYAG	2 cut(s)	2034, 2352
BfrI	CTTAAG	1 cut(s)	496
BglI	GCCNNNNNGGC	1 cut(s)	985
BisI	GCNGC	2 cut(s)	1907, 2034
BlsI	GCNGC	2 cut(s)	1908, 2035
Bme1390I	CCNGG	7 cut(s)	575, 786, 1047, 1332, 1962, 1963, 2448
Bme18I	GGWCC	3 cut(s)	124, 2416, 2461
BmeT110I	CYCGRG	2 cut(s)	488, 1961
BmgBI	CACGTC	1 cut(s)	328
BmgT120I	GGNCC	4 cut(s)	124, 863, 2416, 2461
BmiI	GGNNCC	4 cut(s)	351, 537, 883, 1932
BmrFI	CCNGG	7 cut(s)	575, 786, 1047, 1332, 1962, 1963, 2448
BmrI	ACTGGG	1 cut(s)	1125
BmuI	ACTGGG	1 cut(s)	1125
BpiI	GAAGAC	3 cut(s)	2076, 2113, 2535
BpmI	CTGGAG	3 cut(s)	837, 1949, 2285
Bpu10I	CCTNAGC	1 cut(s)	1425
BpuMI	CCSGG	2 cut(s)	1962, 1963
BsaHI	GRCGYC	1 cut(s)	988
BsaI	GGTCTC	1 cut(s)	2474
BsaJI	CCNNGG	7 cut(s)	785, 943, 1045, 1278, 1960, 1961, 2297
BsaWI	WCCGGW	2 cut(s)	229, 1088
BsaXI	ACNNNNNCTCC	2 cut(s)	1405, 1435
Bsc4I	CCNNNNNNNGG	4 cut(s)	166, 736, 1091, 1977
Bse1I	ACTGG	7 cut(s)	14, 45, 794, 820, 1120, 2268, 2330
Bse21I	CCTNAGG	1 cut(s)	717
Bse3DI	GCAATG	3 cut(s)	933, 1668, 2399
BseAI	TCCGGA	1 cut(s)	229
BseBI	CCWGG	5 cut(s)	575, 786, 1047, 1332, 2448
BseDI	CCNNGG	7 cut(s)	785, 943, 1045, 1278, 1960, 1961, 2297
BseLI	CCNNNNNNNGG	4 cut(s)	166, 736, 1091, 1977
BseMI	GCAATG	3 cut(s)	933, 1668, 2399
BseMII	CTCAG	8 cut(s)	596, 654, 731, 912, 1217, 1293, 1560, 2469
BseNI	ACTGG	7 cut(s)	14, 45, 794, 820, 1120, 2268, 2330
BseRI	GAGGAG	1 cut(s)	680
BseXI	GCAGC	1 cut(s)	2020
Bsh1236I	CGCG	1 cut(s)	317
BshFI	GGCC	4 cut(s)	865, 1202, 1403, 1909
BsiHKCI	CYCGRG	2 cut(s)	488, 1961
BsiSI	CCGG	3 cut(s)	230, 1089, 1962
BslFI	GGGAC	1 cut(s)	1352
BslI	CCNNNNNNNGG	4 cut(s)	166, 736, 1091, 1977
BsmAI	GTCTC	4 cut(s)	156, 1425, 2474, 2564
BsmFI	GGGAC	1 cut(s)	1352
BsmI	GAATGC	5 cut(s)	190, 364, 928, 1793, 2610
BsnI	GGCC	4 cut(s)	865, 1202, 1403, 1909
Bso31I	GGTCTC	1 cut(s)	2474
BsoBI	CYCGRG	2 cut(s)	488, 1961
Bsp13I	TCCGGA	1 cut(s)	229
Bsp1407I	TGTACA	1 cut(s)	2063
Bsp143I	GATC	4 cut(s)	291, 448, 535, 2004
Bsp19I	CCATGG	1 cut(s)	943
BspACI	CCGC	5 cut(s)	688, 1169, 1362, 1820, 1906
BspANI	GGCC	4 cut(s)	865, 1202, 1403, 1909
BspCNI	CTCAG	8 cut(s)	595, 655, 730, 911, 1218, 1294, 1559, 2470
BspEI	TCCGGA	1 cut(s)	229
BspFNI	CGCG	1 cut(s)	317
BspHI	TCATGA	2 cut(s)	322, 408
BspLI	GGNNCC	4 cut(s)	351, 537, 883, 1932
BspMAI	CTGCAG	1 cut(s)	2038
BspPI	GGATC	4 cut(s)	286, 530, 543, 2012
BspTI	CTTAAG	1 cut(s)	496
BspTNI	GGTCTC	1 cut(s)	2474
BsrBI	CCGCTC	1 cut(s)	1906
BsrDI	GCAATG	3 cut(s)	933, 1668, 2399
BsrGI	TGTACA	1 cut(s)	2063
BsrI	ACTGG	7 cut(s)	14, 45, 794, 820, 1120, 2268, 2330
BssECI	CCNNGG	7 cut(s)	785, 943, 1045, 1278, 1960, 1961, 2297
BssMI	GATC	4 cut(s)	291, 448, 535, 2004
BssNI	GRCGYC	1 cut(s)	988
BssT1I	CCWWGG	2 cut(s)	943, 1278
Bst2UI	CCWGG	5 cut(s)	575, 786, 1047, 1332, 2448
Bst4CI	ACNGT	5 cut(s)	99, 549, 680, 958, 2246
Bst6I	CTCTTC	4 cut(s)	270, 372, 1302, 2400
BstACI	GRCGYC	1 cut(s)	988
BstAFI	CTTAAG	1 cut(s)	496
BstAUI	TGTACA	1 cut(s)	2063
BstC8I	GCNNGC	3 cut(s)	1444, 2043, 2112
BstDSI	CCRYGG	1 cut(s)	943
BstFNI	CGCG	1 cut(s)	317
BstHHI	GCGC	2 cut(s)	317, 487
BstKTI	GATC	4 cut(s)	294, 451, 538, 2007
BstMAI	GTCTC	4 cut(s)	156, 1425, 2474, 2564
BstMBI	GATC	4 cut(s)	291, 448, 535, 2004
BstMWI	GCNNNNNNNGC	5 cut(s)	156, 614, 985, 2042, 2051
BstNI	CCWGG	5 cut(s)	575, 786, 1047, 1332, 2448
BstNSI	RCATGY	3 cut(s)	563, 1871, 2440
BstSCI	CCNGG	7 cut(s)	573, 784, 1045, 1330, 1960, 1961, 2446
BstSFI	CTRYAG	2 cut(s)	2034, 2352
BstUI	CGCG	1 cut(s)	317
BstV1I	GCAGC	1 cut(s)	2020
BstV2I	GAAGAC	3 cut(s)	2076, 2113, 2535
BstX2I	RGATCY	2 cut(s)	291, 535
BstYI	RGATCY	2 cut(s)	291, 535
Bsu36I	CCTNAGG	1 cut(s)	717
BsuRI	GGCC	4 cut(s)	865, 1202, 1403, 1909
BtgI	CCRYGG	1 cut(s)	943
BtrI	CACGTC	1 cut(s)	328
BtsI	GCAGTG	1 cut(s)	90
BtsIMutI	CAGTG	5 cut(s)	21, 52, 90, 545, 801
Cac8I	GCNNGC	3 cut(s)	1444, 2043, 2112
CciI	TCATGA	2 cut(s)	322, 408
CfoI	GCGC	2 cut(s)	317, 487
Cfr13I	GGNCC	4 cut(s)	124, 863, 2416, 2461
Cfr9I	CCCGGG	1 cut(s)	1961
CseI	GACGC	1 cut(s)	977
Csp6I	GTAC	7 cut(s)	691, 1306, 1463, 1517, 2064, 2333, 2409
CviQI	GTAC	7 cut(s)	691, 1306, 1463, 1517, 2064, 2333, 2409
DpnI	GATC	4 cut(s)	293, 450, 537, 2006
DpnII	GATC	4 cut(s)	291, 448, 535, 2004
DrdI	GACNNNNNNGTC	1 cut(s)	2423
DseDI	GACNNNNNNGTC	1 cut(s)	2423
EaeI	YGGCCR	1 cut(s)	1907
Eam1104I	CTCTTC	4 cut(s)	270, 372, 1302, 2400
EarI	CTCTTC	4 cut(s)	270, 372, 1302, 2400
Eco130I	CCWWGG	2 cut(s)	943, 1278
Eco31I	GGTCTC	1 cut(s)	2474
Eco32I	GATATC	2 cut(s)	1954, 2304
Eco47I	GGWCC	3 cut(s)	124, 2416, 2461
Eco57I	CTGAAG	5 cut(s)	174, 774, 1155, 1635, 2013
Eco81I	CCTNAGG	1 cut(s)	717
Eco88I	CYCGRG	2 cut(s)	488, 1961
EcoRI	GAATTC	2 cut(s)	1609, 1801
EcoRII	CCWGG	5 cut(s)	573, 784, 1045, 1330, 2446
EcoRV	GATATC	2 cut(s)	1954, 2304
EcoT14I	CCWWGG	2 cut(s)	943, 1278
ErhI	CCWWGG	2 cut(s)	943, 1278
FalI	AAGNNNNNCTT	2 cut(s)	1726, 1758
FaqI	GGGAC	1 cut(s)	1352
FauI	CCCGC	1 cut(s)	1827
FauNDI	CATATG	1 cut(s)	1807
Fnu4HI	GCNGC	2 cut(s)	1907, 2034
Fsp4HI	GCNGC	2 cut(s)	1907, 2034
FspBI	CTAG	2 cut(s)	243, 2319
GlaI	GCGC	2 cut(s)	316, 486
GluI	GCNGC	2 cut(s)	1907, 2034
GsuI	CTGGAG	3 cut(s)	837, 1949, 2285
HaeIII	GGCC	4 cut(s)	865, 1202, 1403, 1909
HapII	CCGG	3 cut(s)	230, 1089, 1962
HgaI	GACGC	1 cut(s)	977
HhaI	GCGC	2 cut(s)	317, 487
Hin1I	GRCGYC	1 cut(s)	988
Hin6I	GCGC	2 cut(s)	315, 485
HinP1I	GCGC	2 cut(s)	315, 485
HincII	GTYRAC	3 cut(s)	676, 2242, 2494
HindII	GTYRAC	3 cut(s)	676, 2242, 2494
HindIII	AAGCTT	2 cut(s)	641, 756
HpaII	CCGG	3 cut(s)	230, 1089, 1962
HphI	GGTGA	4 cut(s)	347, 659, 1466, 2513
Hpy166II	GTNNAC	6 cut(s)	460, 676, 683, 1465, 2242, 2494
Hpy8I	GTNNAC	6 cut(s)	460, 676, 683, 1465, 2242, 2494
Hpy99I	CGWCG	1 cut(s)	1598
HpyCH4III	ACNGT	5 cut(s)	99, 549, 680, 958, 2246
HpyCH4IV	ACGT	3 cut(s)	327, 1311, 2453
HpyCH4V	TGCA	9 cut(s)	83, 219, 532, 617, 827, 926, 2036, 2054, 2110
HpyF10VI	GCNNNNNNNGC	5 cut(s)	156, 614, 985, 2042, 2051
HpySE526I	ACGT	3 cut(s)	327, 1311, 2453
Hsp92I	GRCGYC	1 cut(s)	988
HspAI	GCGC	2 cut(s)	315, 485
Kpn2I	TCCGGA	1 cut(s)	229
Kzo9I	GATC	4 cut(s)	291, 448, 535, 2004
LmnI	GCTCC	6 cut(s)	232, 346, 667, 1345, 1930, 2238
Lsp1109I	GCAGC	1 cut(s)	2020
MaeI	CTAG	2 cut(s)	243, 2319
MaeII	ACGT	3 cut(s)	327, 1311, 2453
MaeIII	GTNAC	4 cut(s)	798, 1007, 1357, 2425
MalI	GATC	4 cut(s)	293, 450, 537, 2006
MbiI	CCGCTC	1 cut(s)	1906
MboI	GATC	4 cut(s)	291, 448, 535, 2004
MfeI	CAATTG	2 cut(s)	310, 2125
MflI	RGATCY	2 cut(s)	291, 535
MlyI	GAGTC	4 cut(s)	139, 629, 1486, 2219
MmeI	TCCRAC	3 cut(s)	235, 612, 940
MroI	TCCGGA	1 cut(s)	229
MroXI	GAANNNNTTC	3 cut(s)	516, 2202, 2508
MseI	TTAA	6 cut(s)	497, 1629, 1856, 2250, 2540, 2583
MslI	CAYNNNNRTG	2 cut(s)	1215, 2182
MspA1I	CMGCKG	2 cut(s)	688, 2033
MspCI	CTTAAG	1 cut(s)	496
MspI	CCGG	3 cut(s)	230, 1089, 1962
MspR9I	CCNGG	7 cut(s)	575, 786, 1047, 1332, 1962, 1963, 2448
MunI	CAATTG	2 cut(s)	310, 2125
Mva1269I	GAATGC	5 cut(s)	190, 364, 928, 1793, 2610
MvaI	CCWGG	5 cut(s)	575, 786, 1047, 1332, 2448
MvnI	CGCG	1 cut(s)	317
MwoI	GCNNNNNNNGC	5 cut(s)	156, 614, 985, 2042, 2051
NciI	CCSGG	2 cut(s)	1962, 1963
NcoI	CCATGG	1 cut(s)	943
NdeI	CATATG	1 cut(s)	1807
NdeII	GATC	4 cut(s)	291, 448, 535, 2004
NlaIV	GGNNCC	4 cut(s)	351, 537, 883, 1932
NmeAIII	GCCGAG	1 cut(s)	185
NmuCI	GTSAC	2 cut(s)	1007, 2425
NspI	RCATGY	3 cut(s)	563, 1871, 2440
PaeR7I	CTCGAG	1 cut(s)	488
PagI	TCATGA	2 cut(s)	322, 408
PciI	ACATGT	2 cut(s)	559, 2436
PctI	GAATGC	5 cut(s)	190, 364, 928, 1793, 2610
PdmI	GAANNNNTTC	3 cut(s)	516, 2202, 2508
PfoI	TCCNGGA	2 cut(s)	573, 1330
PkrI	GCNGC	2 cut(s)	1908, 2035
PleI	GAGTC	4 cut(s)	139, 628, 1485, 2219
PpsI	GAGTC	4 cut(s)	139, 628, 1485, 2219
PscI	ACATGT	2 cut(s)	559, 2436
PshBI	ATTAAT	1 cut(s)	2250
Psp1406I	AACGTT	1 cut(s)	1311
Psp6I	CCWGG	5 cut(s)	573, 784, 1045, 1330, 2446
PspGI	CCWGG	5 cut(s)	573, 784, 1045, 1330, 2446
PspN4I	GGNNCC	4 cut(s)	351, 537, 883, 1932
PspPI	GGNCC	4 cut(s)	124, 863, 2416, 2461
PspXI	VCTCGAGB	1 cut(s)	488
PstI	CTGCAG	1 cut(s)	2038
PsuI	RGATCY	2 cut(s)	291, 535
PvuII	CAGCTG	1 cut(s)	2033
RsaI	GTAC	7 cut(s)	692, 1307, 1464, 1518, 2065, 2334, 2410
RsaNI	GTAC	7 cut(s)	691, 1306, 1463, 1517, 2064, 2333, 2409
RseI	CAYNNNNRTG	2 cut(s)	1215, 2182
SaqAI	TTAA	6 cut(s)	497, 1629, 1856, 2250, 2540, 2583
SatI	GCNGC	2 cut(s)	1907, 2034
Sau3AI	GATC	4 cut(s)	291, 448, 535, 2004
Sau96I	GGNCC	4 cut(s)	124, 863, 2416, 2461
SchI	GAGTC	4 cut(s)	139, 629, 1486, 2219
ScrFI	CCNGG	7 cut(s)	575, 786, 1047, 1332, 1962, 1963, 2448
SfcI	CTRYAG	2 cut(s)	2034, 2352
Sfr274I	CTCGAG	1 cut(s)	488
SinI	GGWCC	3 cut(s)	124, 2416, 2461
SlaI	CTCGAG	1 cut(s)	488
SmaI	CCCGGG	1 cut(s)	1963
SmiMI	CAYNNNNRTG	2 cut(s)	1215, 2182
SmlI	CTYRAG	2 cut(s)	488, 496
SmoI	CTYRAG	2 cut(s)	488, 496
SsiI	CCGC	5 cut(s)	688, 1169, 1362, 1820, 1906
SspMI	CTAG	2 cut(s)	243, 2319
StyD4I	CCNGG	7 cut(s)	573, 784, 1045, 1330, 1960, 1961, 2446
StyI	CCWWGG	2 cut(s)	943, 1278
TaaI	ACNGT	5 cut(s)	99, 549, 680, 958, 2246
TaiI	ACGT	3 cut(s)	330, 1314, 2456
TaqI	TCGA	5 cut(s)	489, 1623, 2007, 2228, 2472
TatI	WGTACW	4 cut(s)	1305, 1462, 1516, 2063
TauI	GCSGC	1 cut(s)	1909
Tru1I	TTAA	6 cut(s)	497, 1629, 1856, 2250, 2540, 2583
Tru9I	TTAA	6 cut(s)	497, 1629, 1856, 2250, 2540, 2583
TscAI	CASTG	5 cut(s)	21, 52, 90, 552, 801
TseFI	GTSAC	2 cut(s)	1007, 2425
TseI	GCWGC	1 cut(s)	2033
Tsp45I	GTSAC	2 cut(s)	1007, 2425
TspGWI	ACGGA	3 cut(s)	458, 1582, 2378
TspMI	CCCGGG	1 cut(s)	1961
TspRI	CASTG	5 cut(s)	21, 52, 90, 552, 801
Vha464I	CTTAAG	1 cut(s)	496
VpaK11BI	GGWCC	3 cut(s)	124, 2416, 2461
VspI	ATTAAT	1 cut(s)	2250
XapI	RAATTY	7 cut(s)	805, 994, 1609, 1779, 1801, 2009, 2198
XceI	RCATGY	3 cut(s)	563, 1871, 2440
XhoI	CTCGAG	1 cut(s)	488
XmaI	CCCGGG	1 cut(s)	1961
XmnI	GAANNNNTTC	3 cut(s)	516, 2202, 2508
XspI	CTAG	2 cut(s)	243, 2319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.