FvH4_7g17040

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0016920
Physical Location & Seq
Reverse (-)
14577726 .. 14579348
1623 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g17040.t1

Sequence Viewer

Length: 1515 bp
ATGATCCGCTGCTTCTCCCACTCCCCCTCACCTCCCCACTCCCTCCTTCTCTACTCCTCCATGCTTCTCCGCCACGCCAAACCCAACAACTACACTTTCACTTTCCTCCTCCAGGCCTGCAGCGTCGCCTCTGCTCTCCCCGAAGGAGCCCAGGTCCATGCTCATGCCATCACGCTTGGTTTCGCCGACTTCGTCTTTGTCAGAAACGCCTTGATTCACTTGTATTCTTCTTGTTCTAGTCTCGAATGCTCCGCAAGGGTGTTTGAGGACAATGTCGGCTCCCGAGATATCGTTACTTGGAACTCGATGCTGTCTGCTTTTGTTAGACATGGGCAGATTGATAATGCGCGGAAAGTTTTCGATAAAATGCCCAAGAGAGATGTCGTCTCCTGGAGTAGCGTCATCTCCGGGTACGTGCAAAACGGGATGTTAGAGCAAGGGTTGGAGTGCTTTAAAGAGATGAGAGACAAGGGGGTGAGGTTGAATGAGGCCACGTTGGTCTCGGTGCTTTCGGCGTCTGCCCAGATGGGTTTGCTAGAACACGGCAGGCTAGTGCACTCGCTTGCAGAGTCCTTCAAGTTCCCCTTGACTGTTTCGCTTGGCACCGCATTGATCGACATGTATGCCAAATGTGGATGCATTGAACAGTCTAGACACTTGTTTAGCACGATGCCGGCCAGAGATATATGGACATGGAATGTTATGATCTGTGGATTGGCCTCTCACGGCCTTGCGAAAGAGGCACTCCAACACTTCGAGAGGTTAACTAATGAAGAAGGGCTCCGTCCCGCCAATGTCACCTTCATTGGTGTCTTGGGTGCCTGCAGTAGAGCAGGTCTGGTTAGTGAGGGCAGACATTATTTTAAAATAATGACTCACAAGTACGGCATTCAGCCAGTGATGGAGCATTATGGGTGCATGGTTGATCTCTTAGGCCGTGCAGGGTTCGTAGATGAAGCTGCTGAGATGATTGACAAGATGACGCTTCCACCCGATCCTGTGTTATGGGCAACGCTACTTTGTGCTTGCAGGATGCATGGCTCAATAGAATTGGGAGAAAAGATTGGGAATAAGTTGATTCAATTGGATCCGACCCATGATGGGCATTATGTACAACTAGCCGGTATATATGCGAAAGCAAAGAAATGGGAAGATGTTGTTAGAGTTAGGAGGTTGATGACTGCGAAACACACCAATAAAGCAGCAGGTTGGAGTTTGATTGAAGCACAAGGTAAAGTTCATAAATTTGTTGCAGGGGATAGAGAGCATGAACGTTCCCAAGAGATTTATAAAATGCTAGAGACAATTGTAACTCGAATAGCGGAAGCTGGCTACTCGCCAAATGTTTCATCGGTGTTGCATGATATAGGGGAGGAAGAAAAGGAGAATGCAATAAAGGAGCATAGTGAGCGGCTTGCAATGGCATTTGGCATGTTGGTAACAGGGAATGGGGATTGCATTCGGATTGTGAAGAATTTGAGAGTTTGTGAGGACTGCCATGAGATTAGCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

505

Amino Acids

56.12

Weight (kDa)

6.92

Isoelectric Point (pI)

44.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 95 - 128 2.3e-08 PPR repeat family
PPR_1 PF12854 95 - 123 7.2e-06 PPR repeat
PPR PF01535 98 - 127 2.5e-08 PPR repeat
PPR_2 PF13041 126 - 172 7.8e-10 PPR repeat family
PPR PF01535 129 - 159 3.9e-09 PPR repeat
E_motif PF20431 346 - 408 6.3e-13 E motif
DYW_deaminase PF14432 444 - 502 3e-21 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016920)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17040
malus_domestica MD15G1440600.v1.1
prunus_persica Prupe.1G582700_v2.0.a1 Prupe.1G582700_v2.0.a1
pyrus_communis pycom15g38840
rosa_chinensis RchiOBHm_Chr7g0220271
rosa_laevigata RLG00000002244
rosa_multiflora Rmu_sc0001136.1_g000028
rosa_roxburghii Rroxscaffold_3G00239660
rosa_rugosa Rorug07G0191700
rosa_samantha Rh7AG333700 Rh7BG323400 Rh7CG351300
rosa_wichuraiana Rw7G028150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1290
Acc36I ACCTGC 2 cut(s) 824, 1196
AccB1I GGYRCC 2 cut(s) 602, 818
AccBSI CCGCTC 1 cut(s) 1411
AccII CGCG 1 cut(s) 349
AciI CCGC 8 cut(s) 7, 70, 252, 349, 606, 789, 1322, 1411
AclI AACGTT 1 cut(s) 1273
AclWI GGATC 3 cut(s) 989, 1082, 1095
AcoI YGGCCR 1 cut(s) 675
AcsI RAATTY 2 cut(s) 1244, 1474
AcyI GRCGYC 1 cut(s) 515
AfaI GTAC 3 cut(s) 413, 884, 1113
AfiI CCNNNNNNNGG 2 cut(s) 112, 1101
AflIII ACRYGT 1 cut(s) 618
AgsI TTSAA 5 cut(s) 484, 577, 644, 1082, 1223
AjnI CCWGG 3 cut(s) 111, 150, 389
AjuI GAANNNNNNNTTGG 2 cut(s) 785, 817
AluBI AGCT 2 cut(s) 959, 1328
AluI AGCT 2 cut(s) 959, 1328
Alw21I GWGCWC 1 cut(s) 558
Alw26I GTCTC 5 cut(s) 245, 391, 459, 505, 1295
Alw44I GTGCAC 1 cut(s) 554
AlwI GGATC 3 cut(s) 989, 1082, 1095
Ama87I CYCGRG 1 cut(s) 282
AoxI GGCC 6 cut(s) 114, 489, 675, 717, 727, 934
ApaLI GTGCAC 1 cut(s) 554
ApeKI GCWGC 4 cut(s) 9, 120, 959, 1202
ApoI RAATTY 2 cut(s) 1244, 1474
ArsI GACNNNNNNTTYG 2 cut(s) 179, 211
Asp700I GAANNNNTTC 1 cut(s) 356
AspLEI GCGC 1 cut(s) 349
AspS9I GGNCC 1 cut(s) 154
AsuC2I CCSGG 1 cut(s) 409
AsuHPI GGTGA 3 cut(s) 21, 487, 790
AvaI CYCGRG 1 cut(s) 282
AvaII GGWCC 1 cut(s) 154
BaeGI GKGCMC 1 cut(s) 558
BamHI GGATCC 1 cut(s) 1087
BanI GGYRCC 2 cut(s) 602, 818
BanII GRGCYC 2 cut(s) 151, 783
Bbv12I GWGCWC 1 cut(s) 558
BbvI GCAGC 3 cut(s) 132, 946, 1214
BccI CCATC 4 cut(s) 176, 520, 895, 1094
BceAI ACGGC 4 cut(s) 559, 742, 901, 921
BcgI CGANNNNNNTGC 2 cut(s) 605, 639
BciT130I CCWGG 3 cut(s) 113, 152, 391
BcnI CCSGG 1 cut(s) 409
BcoDI GTCTC 5 cut(s) 245, 391, 459, 505, 1295
BfaI CTAG 6 cut(s) 237, 536, 551, 651, 1118, 1298
BfmI CTRYAG 2 cut(s) 118, 823
BfuAI ACCTGC 2 cut(s) 824, 1196
BisI GCNGC 5 cut(s) 10, 121, 960, 1203, 1412
BlsI GCNGC 5 cut(s) 11, 122, 961, 1204, 1413
Bme1390I CCNGG 4 cut(s) 113, 152, 391, 409
Bme18I GGWCC 1 cut(s) 154
BmeT110I CYCGRG 1 cut(s) 282
BmgT120I GGNCC 1 cut(s) 154
BmiI GGNNCC 6 cut(s) 148, 280, 604, 782, 820, 1089
BmrFI CCNGG 4 cut(s) 113, 152, 391, 409
BmsI GCATC 4 cut(s) 297, 626, 660, 1023
BpmI CTGGAG 2 cut(s) 95, 412
BpuMI CCSGG 1 cut(s) 409
BsaAI YACGTR 1 cut(s) 415
BsaHI GRCGYC 1 cut(s) 515
BsaI GGTCTC 1 cut(s) 505
BsaJI CCNNGG 1 cut(s) 150
BsaXI ACNNNNNCTCC 2 cut(s) 138, 168
Bsc4I CCNNNNNNNGG 2 cut(s) 112, 1101
Bse118I RCCGGY 2 cut(s) 673, 1121
Bse1I ACTGG 1 cut(s) 896
Bse3DI GCAATG 1 cut(s) 1425
BseBI CCWGG 3 cut(s) 113, 152, 391
BseDI CCNNGG 1 cut(s) 150
BseGI GGATG 3 cut(s) 432, 641, 1038
BseLI CCNNNNNNNGG 2 cut(s) 112, 1101
BseMI GCAATG 1 cut(s) 1425
BseMII CTCAG 1 cut(s) 954
BseNI ACTGG 1 cut(s) 896
BseRI GAGGAG 2 cut(s) 46, 98
BseSI GKGCMC 1 cut(s) 558
BseXI GCAGC 3 cut(s) 132, 946, 1214
BsgI GTGCAG 1 cut(s) 960
Bsh1236I CGCG 1 cut(s) 349
BshFI GGCC 6 cut(s) 116, 491, 677, 719, 729, 936
BshNI GGYRCC 2 cut(s) 602, 818
BsiHKAI GWGCWC 1 cut(s) 558
BsiHKCI CYCGRG 1 cut(s) 282
BsiSI CCGG 3 cut(s) 408, 674, 1122
BslFI GGGAC 1 cut(s) 771
BslI CCNNNNNNNGG 2 cut(s) 112, 1101
BsmAI GTCTC 5 cut(s) 245, 391, 459, 505, 1295
BsmBI CGTCTC 1 cut(s) 391
BsmFI GGGAC 1 cut(s) 771
BsmI GAATGC 4 cut(s) 251, 888, 1393, 1458
BsnI GGCC 6 cut(s) 116, 491, 677, 719, 729, 936
Bso31I GGTCTC 1 cut(s) 505
BsoBI CYCGRG 1 cut(s) 282
Bsp1286I GDGCHC 3 cut(s) 151, 558, 783
Bsp1407I TGTACA 1 cut(s) 1111
Bsp143I GATC 6 cut(s) 3, 612, 705, 925, 994, 1087
BspACI CCGC 8 cut(s) 7, 70, 252, 349, 606, 789, 1322, 1411
BspANI GGCC 6 cut(s) 116, 491, 677, 719, 729, 936
BspCNI CTCAG 1 cut(s) 955
BspFNI CGCG 1 cut(s) 349
BspLI GGNNCC 6 cut(s) 148, 280, 604, 782, 820, 1089
BspMAI CTGCAG 2 cut(s) 122, 827
BspMI ACCTGC 2 cut(s) 824, 1196
BspPI GGATC 3 cut(s) 989, 1082, 1095
BspT107I GGYRCC 2 cut(s) 602, 818
BspTNI GGTCTC 1 cut(s) 505
BsrBI CCGCTC 1 cut(s) 1411
BsrDI GCAATG 1 cut(s) 1425
BsrFI RCCGGY 2 cut(s) 673, 1121
BsrGI TGTACA 1 cut(s) 1111
BsrI ACTGG 1 cut(s) 896
BssAI RCCGGY 2 cut(s) 673, 1121
BssECI CCNNGG 1 cut(s) 150
BssMI GATC 6 cut(s) 3, 612, 705, 925, 994, 1087
BssNI GRCGYC 1 cut(s) 515
Bst2UI CCWGG 3 cut(s) 113, 152, 391
Bst4CI ACNGT 2 cut(s) 592, 648
BstACI GRCGYC 1 cut(s) 515
BstAUI TGTACA 1 cut(s) 1111
BstBAI YACGTR 1 cut(s) 415
BstC8I GCNNGC 8 cut(s) 118, 548, 564, 675, 823, 1027, 1330, 1416
BstDEI CTNAG 2 cut(s) 931, 963
BstENI CCTNNNNNAGG 1 cut(s) 110
BstF5I GGATG 3 cut(s) 432, 641, 1038
BstFNI CGCG 1 cut(s) 349
BstHHI GCGC 1 cut(s) 349
BstKTI GATC 6 cut(s) 6, 615, 708, 928, 997, 1090
BstMAI GTCTC 5 cut(s) 245, 391, 459, 505, 1295
BstMBI GATC 6 cut(s) 3, 612, 705, 925, 994, 1087
BstMWI GCNNNNNNNGC 2 cut(s) 740, 1408
BstNI CCWGG 3 cut(s) 113, 152, 391
BstNSI RCATGY 2 cut(s) 622, 1435
BstSCI CCNGG 4 cut(s) 111, 150, 389, 407
BstSFI CTRYAG 2 cut(s) 118, 823
BstSLI GKGCMC 1 cut(s) 558
BstUI CGCG 1 cut(s) 349
BstV1I GCAGC 3 cut(s) 132, 946, 1214
BstX2I RGATCY 1 cut(s) 1087
BstYI RGATCY 1 cut(s) 1087
BsuRI GGCC 6 cut(s) 116, 491, 677, 719, 729, 936
BtsCI GGATG 3 cut(s) 432, 641, 1038
BtsIMutI CAGTG 1 cut(s) 903
BveI ACCTGC 2 cut(s) 824, 1196
Cac8I GCNNGC 8 cut(s) 118, 548, 564, 675, 823, 1027, 1330, 1416
CfoI GCGC 1 cut(s) 349
Cfr10I RCCGGY 2 cut(s) 673, 1121
Cfr13I GGNCC 1 cut(s) 154
CseI GACGC 4 cut(s) 112, 388, 504, 991
Csp6I GTAC 3 cut(s) 412, 883, 1112
CviQI GTAC 3 cut(s) 412, 883, 1112
DdeI CTNAG 2 cut(s) 931, 963
DpnI GATC 6 cut(s) 5, 614, 707, 927, 996, 1089
DpnII GATC 6 cut(s) 3, 612, 705, 925, 994, 1087
DraI TTTAAA 2 cut(s) 454, 865
EaeI YGGCCR 1 cut(s) 675
EciI GGCGGA 1 cut(s) 59
Eco147I AGGCCT 1 cut(s) 116
Eco24I GRGCYC 2 cut(s) 151, 783
Eco31I GGTCTC 1 cut(s) 505
Eco32I GATATC 1 cut(s) 289
Eco47I GGWCC 1 cut(s) 154
Eco88I CYCGRG 1 cut(s) 282
EcoNI CCTNNNNNAGG 1 cut(s) 110
EcoRII CCWGG 3 cut(s) 111, 150, 389
EcoRV GATATC 1 cut(s) 289
EcoT22I ATGCAT 2 cut(s) 641, 1038
EcoT38I GRGCYC 2 cut(s) 151, 783
Esp3I CGTCTC 1 cut(s) 391
FalI AAGNNNNNCTT 2 cut(s) 569, 601
FaqI GGGAC 1 cut(s) 771
FauI CCCGC 1 cut(s) 796
Fnu4HI GCNGC 5 cut(s) 10, 121, 960, 1203, 1412
FokI GGATG 3 cut(s) 439, 648, 1045
FriOI GRGCYC 2 cut(s) 151, 783
Fsp4HI GCNGC 5 cut(s) 10, 121, 960, 1203, 1412
FspBI CTAG 6 cut(s) 237, 536, 551, 651, 1118, 1298
GlaI GCGC 1 cut(s) 348
GluI GCNGC 5 cut(s) 10, 121, 960, 1203, 1412
GsuI CTGGAG 2 cut(s) 95, 412
HaeIII GGCC 6 cut(s) 116, 491, 677, 719, 729, 936
HapII CCGG 3 cut(s) 408, 674, 1122
HgaI GACGC 4 cut(s) 112, 388, 504, 991
HhaI GCGC 1 cut(s) 349
Hin1I GRCGYC 1 cut(s) 515
Hin6I GCGC 1 cut(s) 347
HinP1I GCGC 1 cut(s) 347
HincII GTYRAC 1 cut(s) 765
HindII GTYRAC 1 cut(s) 765
HinfI GANTC 4 cut(s) 214, 569, 874, 1078
HpaI GTTAAC 1 cut(s) 765
HpaII CCGG 3 cut(s) 408, 674, 1122
HphI GGTGA 3 cut(s) 21, 487, 790
Hpy166II GTNNAC 2 cut(s) 556, 765
Hpy188I TCNGA 3 cut(s) 203, 1092, 1464
Hpy188III TCNNGA 4 cut(s) 242, 282, 651, 757
Hpy8I GTNNAC 2 cut(s) 556, 765
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 5 cut(s) 56, 137, 583, 770, 811
HpyCH4III ACNGT 2 cut(s) 592, 648
HpyCH4IV ACGT 3 cut(s) 414, 494, 1273
HpyF10VI GCNNNNNNNGC 2 cut(s) 740, 1408
HpyF3I CTNAG 2 cut(s) 931, 963
HpySE526I ACGT 3 cut(s) 414, 494, 1273
Hsp92I GRCGYC 1 cut(s) 515
HspAI GCGC 1 cut(s) 347
KroI GCCGGC 1 cut(s) 673
KroNI GCCGGC 1 cut(s) 675
KspAI GTTAAC 1 cut(s) 765
Kzo9I GATC 6 cut(s) 3, 612, 705, 925, 994, 1087
LmnI GCTCC 6 cut(s) 146, 254, 284, 786, 904, 1399
Lsp1109I GCAGC 3 cut(s) 132, 946, 1214
LweI GCATC 4 cut(s) 297, 626, 660, 1023
MaeI CTAG 6 cut(s) 237, 536, 551, 651, 1118, 1298
MaeII ACGT 3 cut(s) 414, 494, 1273
MaeIII GTNAC 4 cut(s) 292, 796, 1309, 1438
MalI GATC 6 cut(s) 5, 614, 707, 927, 996, 1089
MbiI CCGCTC 1 cut(s) 1411
MboI GATC 6 cut(s) 3, 612, 705, 925, 994, 1087
MboII GAAGA 5 cut(s) 219, 785, 1163, 1388, 1483
MfeI CAATTG 2 cut(s) 1082, 1305
MflI RGATCY 1 cut(s) 1087
MhlI GDGCHC 3 cut(s) 151, 558, 783
MluCI AATT 5 cut(s) 1049, 1082, 1244, 1305, 1474
MlyI GAGTC 2 cut(s) 578, 868
MmeI TCCRAC 4 cut(s) 423, 772, 1115, 1190
Mph1103I ATGCAT 2 cut(s) 641, 1038
MroNI GCCGGC 1 cut(s) 673
MroXI GAANNNNTTC 1 cut(s) 356
MseI TTAA 3 cut(s) 453, 764, 864
MslI CAYNNNNRTG 1 cut(s) 162
MspA1I CMGCKG 1 cut(s) 9
MspI CCGG 3 cut(s) 408, 674, 1122
MspR9I CCNGG 4 cut(s) 113, 152, 391, 409
MunI CAATTG 2 cut(s) 1082, 1305
Mva1269I GAATGC 4 cut(s) 251, 888, 1393, 1458
MvaI CCWGG 3 cut(s) 113, 152, 391
MvnI CGCG 1 cut(s) 349
MwoI GCNNNNNNNGC 2 cut(s) 740, 1408
NaeI GCCGGC 1 cut(s) 675
NciI CCSGG 1 cut(s) 409
NdeII GATC 6 cut(s) 3, 612, 705, 925, 994, 1087
NgoMIV GCCGGC 1 cut(s) 673
NlaIV GGNNCC 6 cut(s) 148, 280, 604, 782, 820, 1089
NmuCI GTSAC 1 cut(s) 796
NsiI ATGCAT 2 cut(s) 641, 1038
NspI RCATGY 2 cut(s) 622, 1435
PceI AGGCCT 1 cut(s) 116
PciI ACATGT 1 cut(s) 618
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PctI GAATGC 4 cut(s) 251, 888, 1393, 1458
PdiI GCCGGC 1 cut(s) 675
PdmI GAANNNNTTC 1 cut(s) 356
PfeI GAWTC 2 cut(s) 214, 1078
PflFI GACNNNGTC 2 cut(s) 191, 272
PfoI TCCNGGA 1 cut(s) 389
PkrI GCNGC 5 cut(s) 11, 122, 961, 1204, 1413
PleI GAGTC 2 cut(s) 577, 868
PpsI GAGTC 2 cut(s) 577, 868
Ppu21I YACGTR 1 cut(s) 415
PscI ACATGT 1 cut(s) 618
PsiI TTATAA 1 cut(s) 1290
Psp1406I AACGTT 1 cut(s) 1273
Psp6I CCWGG 3 cut(s) 111, 150, 389
PspGI CCWGG 3 cut(s) 111, 150, 389
PspN4I GGNNCC 6 cut(s) 148, 280, 604, 782, 820, 1089
PspPI GGNCC 1 cut(s) 154
PstI CTGCAG 2 cut(s) 122, 827
PsuI RGATCY 1 cut(s) 1087
PsyI GACNNNGTC 2 cut(s) 191, 272
RsaI GTAC 3 cut(s) 413, 884, 1113
RsaNI GTAC 3 cut(s) 412, 883, 1112
RseI CAYNNNNRTG 1 cut(s) 162
SaqAI TTAA 3 cut(s) 453, 764, 864
SatI GCNGC 5 cut(s) 10, 121, 960, 1203, 1412
Sau3AI GATC 6 cut(s) 3, 612, 705, 925, 994, 1087
Sau96I GGNCC 1 cut(s) 154
SchI GAGTC 2 cut(s) 578, 868
ScrFI CCNGG 4 cut(s) 113, 152, 391, 409
SduI GDGCHC 3 cut(s) 151, 558, 783
SfaNI GCATC 4 cut(s) 297, 626, 660, 1023
SfcI CTRYAG 2 cut(s) 118, 823
SinI GGWCC 1 cut(s) 154
SmiMI CAYNNNNRTG 1 cut(s) 162
Sse9I AATT 5 cut(s) 1049, 1082, 1244, 1305, 1474
SseBI AGGCCT 1 cut(s) 116
SsiI CCGC 8 cut(s) 7, 70, 252, 349, 606, 789, 1322, 1411
SspMI CTAG 6 cut(s) 237, 536, 551, 651, 1118, 1298
StuI AGGCCT 1 cut(s) 116
StyD4I CCNGG 4 cut(s) 111, 150, 389, 407
TaaI ACNGT 2 cut(s) 592, 648
TaiI ACGT 3 cut(s) 417, 497, 1276
TaqI TCGA 6 cut(s) 243, 305, 360, 615, 756, 1315
TasI AATT 5 cut(s) 1049, 1082, 1244, 1305, 1474
TatI WGTACW 1 cut(s) 1111
TauI GCSGC 1 cut(s) 1414
TfiI GAWTC 2 cut(s) 214, 1078
Tru1I TTAA 3 cut(s) 453, 764, 864
Tru9I TTAA 3 cut(s) 453, 764, 864
TscAI CASTG 1 cut(s) 903
TseFI GTSAC 1 cut(s) 796
TseI GCWGC 4 cut(s) 9, 120, 959, 1202
Tsp45I GTSAC 1 cut(s) 796
TspDTI ATGAA 6 cut(s) 786, 793, 969, 1229, 1284, 1338
TspGWI ACGGA 1 cut(s) 773
TspRI CASTG 1 cut(s) 903
Tth111I GACNNNGTC 2 cut(s) 191, 272
VneI GTGCAC 1 cut(s) 554
VpaK11BI GGWCC 1 cut(s) 154
XagI CCTNNNNNAGG 1 cut(s) 110
XapI RAATTY 2 cut(s) 1244, 1474
XbaI TCTAGA 1 cut(s) 650
XceI RCATGY 2 cut(s) 622, 1435
XmnI GAANNNNTTC 1 cut(s) 356
XspI CTAG 6 cut(s) 237, 536, 551, 651, 1118, 1298
Zsp2I ATGCAT 2 cut(s) 641, 1038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.