Rorug07G0191700

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0016920
Physical Location & Seq
Reverse (-)
16327645 .. 16330464
2820 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0191700.1

Sequence Viewer

Length: 1542 bp
ATGGAATTCTGGTCGGAATCCGATTCCGGAAGCAGCGGACCTTGGAGCGTGGTGATCACGCTCTCCCTCGTTGTCCTTTGGTACGCGTGGCTCTACTTCAAGAGTTCAGACTCTAACTCGCCGCTGCCGCCGGGTCCACGCCCTCTCCCATTGGTCGGGAACCTTCTCTCTCTGGACCCGGAGCTCCACTCTTACTTCGCGGGCCTGGCCCACACCTACGGCCCAATCTACAAGCTCCGCCTCGGCACCAAGCTCTGCATCGTCGTCACCTCCCCCTCCGTCGCCCGCGAGGTCCTCAAGGACCATGACGTCACCTTCGCCAACCGCGACGTCCCCGCCGCCGGCCGGGCCGCCTCGTACGGAGGATCCGACATCGTGTGGACCCCGTACGGCCCGGAGTGGCGGATGCTGCGGAAGGTCTGCGTGCTCAAGATGCTCAGCAACACCACGCTCGACTCGGTCCACGAGCTGCGGCGGAAGCAGGTCCGGCGAACGGTCGGGTTCTTCTACGGTCGGGCCGGGTCGCCGGTGGACGTGGGCGAGCAGATGTTCCTGACCGTGATGAACGTGATCACGAACATGCTGTGGGGCCGGACGGTGCAGGACGAGGGCGCGGGGCTCGGGGCGGAGTTCCGGCAAGTGGTGGGGGAGATGACGGAGCTGCTGGTGAAGCCGAACGTGTCGGACTTCTATCCGGGTTTGGCCCGGTTTGACTTGCAAGGCGTGTTCAAGCAGATGGAGGGCTTAGGGAAGAGGTTCGACGCGATATTCGAGAGAGTGATAGATCAACGGCTGAGGATGGAGAAGGAAGGCGCGAAGGAGGAGGGGAGTAAAGATTTTTTGACTTTTTTACTGCGGTTAAAAGAGGAGGGAGATTCCAAGACGCCGTTTACTATGACTCACCTCAAAGCCTTGCTTATGGATATGGTTGTGGGCGGGACGGACACATCCTCCAACACAATTGAATTTGCAATGTCGGAAGTTATGAACAAACCAGAAGTGTTGCAAAAAGTCCAGCAAGAATTAGAAGCTGTAGTTGGCAAAAACAGCATTGTAGAAGAGTCTCACATTCACAAGCTACCGTACTTATATGCAGTGATGAAAGAAACACTGCGCTTGCACCCAGTCCTGCCTCTATTAGTCCCACATTGCCCAAGTGAGACATGCACTGTGGGAGGCTATACCATTCCAAAGGGGTCTAGGATTTTTGTTAATGTTTGGGCTATACATAGAGACCCTTCTAGTTGGGAAAACCCATTGGAGTTTGATCCAACTAGATTCTTGGATAGTAAATGGGATTACAGTGGGAGTGACTTCAAGTATTTTCCTTTTGGGTCTGGAAGAAGAATATGTGCAGGGATAGCAATGGCTGAGAGGATGGTGATGCATTCTCTTGCTACACTGCTGCATTCTTTTGATTGGAAACTGCCACAGGGAGAGAAGTTGGATCTTTCGGAGAAGTTTGGTATTGTATTGAAGAAGAAGATACCTTTGGTTGCCATCCCAACTCCAAGGTTGTCAGATCCAGCACTCTATGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

513

Amino Acids

57.65

Weight (kDa)

6.66

Isoelectric Point (pI)

39.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 495 3.1e-107 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016920)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g17040
malus_domestica MD15G1440600.v1.1
prunus_persica Prupe.1G582700_v2.0.a1 Prupe.1G582700_v2.0.a1
pyrus_communis pycom15g38840
rosa_chinensis RchiOBHm_Chr7g0220271
rosa_laevigata RLG00000002244
rosa_multiflora Rmu_sc0001136.1_g000028
rosa_roxburghii Rroxscaffold_3G00239660
rosa_rugosa Rorug07G0191700
rosa_samantha Rh7AG333700 Rh7BG323400 Rh7CG351300
rosa_wichuraiana Rw7G028150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 308
AatII GACGTC 2 cut(s) 312, 333
Acc36I ACCTGC 1 cut(s) 472
AccB1I GGYRCC 1 cut(s) 245
AccII CGCG 7 cut(s) 86, 200, 288, 327, 614, 764, 815
AccIII TCCGGA 1 cut(s) 26
AclWI GGATC 5 cut(s) 360, 373, 1262, 1455, 1517
AcoI YGGCCR 1 cut(s) 343
AcsI RAATTY 2 cut(s) 5, 965
AcyI GRCGYC 3 cut(s) 309, 330, 884
AfaI GTAC 4 cut(s) 83, 359, 389, 1085
AfiI CCNNNNNNNGG 5 cut(s) 155, 341, 345, 493, 640
AflIII ACRYGT 2 cut(s) 84, 678
AgsI TTSAA 5 cut(s) 100, 730, 965, 1318, 1477
AjiI CACGTC 1 cut(s) 535
AjnI CCWGG 1 cut(s) 204
AjuI GAANNNNNNNTTGG 4 cut(s) 1020, 1052, 1475, 1507
AluBI AGCT 7 cut(s) 184, 235, 253, 469, 661, 1031, 1078
AluI AGCT 7 cut(s) 184, 235, 253, 469, 661, 1031, 1078
Alw21I GWGCWC 2 cut(s) 186, 429
Alw26I GTCTC 3 cut(s) 1068, 1154, 1227
AlwI GGATC 5 cut(s) 360, 373, 1262, 1455, 1517
Ama87I CYCGRG 1 cut(s) 620
Aor13HI TCCGGA 1 cut(s) 26
AoxI GGCC 9 cut(s) 202, 207, 220, 343, 348, 391, 516, 589, 702
ApeKI GCWGC 6 cut(s) 33, 124, 409, 469, 661, 1405
ApoI RAATTY 2 cut(s) 5, 965
ArsI GACNNNNNNTTYG 4 cut(s) 299, 331, 752, 784
Asp700I GAANNNNTTC 1 cut(s) 755
AspLEI GCGC 3 cut(s) 614, 815, 1116
AsuC2I CCSGG 7 cut(s) 132, 179, 347, 395, 520, 696, 706
AsuHPI GGTGA 6 cut(s) 64, 259, 304, 679, 893, 1393
AvaI CYCGRG 1 cut(s) 620
AvaII GGWCC 8 cut(s) 38, 134, 175, 292, 301, 381, 460, 484
BamHI GGATCC 1 cut(s) 365
BanI GGYRCC 1 cut(s) 245
BanII GRGCYC 2 cut(s) 186, 621
BauI CACGAG 1 cut(s) 464
Bbv12I GWGCWC 2 cut(s) 186, 429
BbvCI CCTCAGC 1 cut(s) 794
BbvI GCAGC 6 cut(s) 45, 111, 396, 456, 648, 1392
BccI CCATC 4 cut(s) 730, 793, 1372, 1508
BceAI ACGGC 4 cut(s) 235, 406, 806, 871
BciT130I CCWGG 1 cut(s) 206
BclI TGATCA 2 cut(s) 54, 570
BcnI CCSGG 7 cut(s) 132, 179, 347, 395, 520, 696, 706
BcoDI GTCTC 3 cut(s) 1068, 1154, 1227
BfaI CTAG 3 cut(s) 1200, 1242, 1275
BfmI CTRYAG 1 cut(s) 1032
BfuAI ACCTGC 1 cut(s) 472
BglI GCCNNNNNGGC 1 cut(s) 347
BlpI GCTNAGC 1 cut(s) 437
Bme1390I CCNGG 8 cut(s) 132, 179, 206, 347, 395, 520, 696, 706
Bme18I GGWCC 8 cut(s) 38, 134, 175, 292, 301, 381, 460, 484
BmeT110I CYCGRG 1 cut(s) 620
BmgBI CACGTC 1 cut(s) 535
BmiI GGNNCC 7 cut(s) 135, 161, 177, 247, 367, 383, 590
BmrFI CCNGG 8 cut(s) 132, 179, 206, 347, 395, 520, 696, 706
BmrI ACTGGG 1 cut(s) 1118
BmsI GCATC 4 cut(s) 267, 396, 423, 1374
BmuI ACTGGG 1 cut(s) 1118
BplI GAGNNNNNCTC 2 cut(s) 173, 205
Bpu10I CCTNAGC 2 cut(s) 745, 794
Bpu1102I GCTNAGC 1 cut(s) 437
BpuEI CTTGAG 2 cut(s) 281, 413
BpuMI CCSGG 7 cut(s) 132, 179, 347, 395, 520, 696, 706
BsaHI GRCGYC 3 cut(s) 309, 330, 884
BsaI GGTCTC 1 cut(s) 1227
BsaJI CCNNGG 3 cut(s) 41, 241, 1511
BsaWI WCCGGW 1 cut(s) 26
BsaXI ACNNNNNCTCC 4 cut(s) 129, 159, 935, 965
Bsc4I CCNNNNNNNGG 5 cut(s) 155, 341, 345, 493, 640
Bse118I RCCGGY 2 cut(s) 341, 526
Bse1I ACTGG 1 cut(s) 1124
Bse3DI GCAATG 3 cut(s) 978, 1147, 1371
BseAI TCCGGA 1 cut(s) 26
BseBI CCWGG 1 cut(s) 206
BseDI CCNNGG 3 cut(s) 41, 241, 1511
BseGI GGATG 5 cut(s) 411, 804, 947, 1383, 1500
BseLI CCNNNNNNNGG 5 cut(s) 155, 341, 345, 493, 640
BseMI GCAATG 3 cut(s) 978, 1147, 1371
BseMII CTCAG 3 cut(s) 451, 785, 1362
BseNI ACTGG 1 cut(s) 1124
BseRI GAGGAG 2 cut(s) 836, 881
BseX3I CGGCCG 1 cut(s) 343
BseXI GCAGC 6 cut(s) 45, 111, 396, 456, 648, 1392
BsgI GTGCAG 2 cut(s) 620, 1374
Bsh1236I CGCG 7 cut(s) 86, 200, 288, 327, 614, 764, 815
Bsh1285I CGRYCG 3 cut(s) 346, 498, 514
BshFI GGCC 9 cut(s) 204, 209, 222, 345, 350, 393, 518, 591, 704
BshNI GGYRCC 1 cut(s) 245
BsiEI CGRYCG 3 cut(s) 346, 498, 514
BsiHKAI GWGCWC 2 cut(s) 186, 429
BsiHKCI CYCGRG 1 cut(s) 620
BsiWI CGTACG 2 cut(s) 357, 387
BslFI GGGAC 3 cut(s) 317, 952, 1127
BslI CCNNNNNNNGG 5 cut(s) 155, 341, 345, 493, 640
BsmAI GTCTC 3 cut(s) 1068, 1154, 1227
BsmFI GGGAC 3 cut(s) 317, 952, 1127
BsmI GAATGC 2 cut(s) 1387, 1408
BsnI GGCC 9 cut(s) 204, 209, 222, 345, 350, 393, 518, 591, 704
Bso31I GGTCTC 1 cut(s) 1227
BsoBI CYCGRG 1 cut(s) 620
Bsp1286I GDGCHC 3 cut(s) 186, 429, 621
Bsp13I TCCGGA 1 cut(s) 26
Bsp143I GATC 7 cut(s) 54, 365, 570, 784, 1267, 1447, 1522
Bsp1720I GCTNAGC 1 cut(s) 437
BspANI GGCC 9 cut(s) 204, 209, 222, 345, 350, 393, 518, 591, 704
BspCNI CTCAG 3 cut(s) 450, 786, 1363
BspEI TCCGGA 1 cut(s) 26
BspFNI CGCG 7 cut(s) 86, 200, 288, 327, 614, 764, 815
BspLI GGNNCC 7 cut(s) 135, 161, 177, 247, 367, 383, 590
BspMI ACCTGC 1 cut(s) 472
BspPI GGATC 5 cut(s) 360, 373, 1262, 1455, 1517
BspT107I GGYRCC 1 cut(s) 245
BspTNI GGTCTC 1 cut(s) 1227
BsrDI GCAATG 3 cut(s) 978, 1147, 1371
BsrFI RCCGGY 2 cut(s) 341, 526
BsrI ACTGG 1 cut(s) 1124
BssAI RCCGGY 2 cut(s) 341, 526
BssECI CCNNGG 3 cut(s) 41, 241, 1511
BssMI GATC 7 cut(s) 54, 365, 570, 784, 1267, 1447, 1522
BssNI GRCGYC 3 cut(s) 309, 330, 884
BssSI CACGAG 1 cut(s) 464
BssT1I CCWWGG 2 cut(s) 41, 1511
Bst2BI CACGAG 1 cut(s) 464
Bst2UI CCWGG 1 cut(s) 206
Bst4CI ACNGT 7 cut(s) 496, 512, 559, 598, 1083, 1171, 1304
Bst6I CTCTTC 2 cut(s) 746, 1053
BstACI GRCGYC 3 cut(s) 309, 330, 884
BstC8I GCNNGC 6 cut(s) 202, 286, 343, 425, 542, 1118
BstDEI CTNAG 4 cut(s) 437, 745, 794, 1371
BstF5I GGATG 5 cut(s) 411, 804, 947, 1383, 1500
BstFNI CGCG 7 cut(s) 86, 200, 288, 327, 614, 764, 815
BstHHI GCGC 3 cut(s) 614, 815, 1116
BstKTI GATC 7 cut(s) 57, 368, 573, 787, 1270, 1450, 1525
BstMAI GTCTC 3 cut(s) 1068, 1154, 1227
BstMBI GATC 7 cut(s) 54, 365, 570, 784, 1267, 1447, 1522
BstMCI CGRYCG 3 cut(s) 346, 498, 514
BstNI CCWGG 1 cut(s) 206
BstNSI RCATGY 2 cut(s) 583, 1167
BstSCI CCNGG 8 cut(s) 130, 177, 204, 345, 393, 518, 694, 704
BstSFI CTRYAG 1 cut(s) 1032
BstUI CGCG 7 cut(s) 86, 200, 288, 327, 614, 764, 815
BstV1I GCAGC 6 cut(s) 45, 111, 396, 456, 648, 1392
BstX2I RGATCY 3 cut(s) 365, 1447, 1522
BstYI RGATCY 3 cut(s) 365, 1447, 1522
BstZI CGGCCG 1 cut(s) 343
BsuRI GGCC 9 cut(s) 204, 209, 222, 345, 350, 393, 518, 591, 704
BtrI CACGTC 1 cut(s) 535
BtsCI GGATG 5 cut(s) 411, 804, 947, 1383, 1500
BtsI GCAGTG 3 cut(s) 1101, 1109, 1400
BtsIMutI CAGTG 5 cut(s) 1101, 1109, 1167, 1309, 1400
BveI ACCTGC 1 cut(s) 472
Cac8I GCNNGC 6 cut(s) 202, 286, 343, 425, 542, 1118
CfoI GCGC 3 cut(s) 614, 815, 1116
Cfr10I RCCGGY 2 cut(s) 341, 526
CseI GACGC 2 cut(s) 770, 892
Csp6I GTAC 4 cut(s) 82, 358, 388, 1084
CviAII CATG 3 cut(s) 305, 580, 1164
CviQI GTAC 4 cut(s) 82, 358, 388, 1084
DdeI CTNAG 4 cut(s) 437, 745, 794, 1371
DpnI GATC 7 cut(s) 56, 367, 572, 786, 1269, 1449, 1524
DpnII GATC 7 cut(s) 54, 365, 570, 784, 1267, 1447, 1522
DrdI GACNNNNNNGTC 1 cut(s) 308
DseDI GACNNNNNNGTC 1 cut(s) 308
EaeI YGGCCR 1 cut(s) 343
EagI CGGCCG 1 cut(s) 343
Eam1104I CTCTTC 2 cut(s) 746, 1053
EarI CTCTTC 2 cut(s) 746, 1053
EciI GGCGGA 4 cut(s) 227, 418, 490, 641
Ecl136II GAGCTC 1 cut(s) 184
EclXI CGGCCG 1 cut(s) 343
Eco130I CCWWGG 2 cut(s) 41, 1511
Eco24I GRGCYC 2 cut(s) 186, 621
Eco31I GGTCTC 1 cut(s) 1227
Eco47I GGWCC 8 cut(s) 38, 134, 175, 292, 301, 381, 460, 484
Eco52I CGGCCG 1 cut(s) 343
Eco53kI GAGCTC 1 cut(s) 184
Eco88I CYCGRG 1 cut(s) 620
EcoICRI GAGCTC 1 cut(s) 184
EcoO109I RGGNCCY 1 cut(s) 292
EcoRI GAATTC 1 cut(s) 5
EcoRII CCWGG 1 cut(s) 204
EcoT14I CCWWGG 2 cut(s) 41, 1511
EcoT22I ATGCAT 1 cut(s) 1389
EcoT38I GRGCYC 2 cut(s) 186, 621
ErhI CCWWGG 2 cut(s) 41, 1511
FaeI CATG 3 cut(s) 308, 583, 1167
FalI AAGNNNNNCTT 2 cut(s) 900, 932
FaqI GGGAC 3 cut(s) 317, 952, 1127
FatI CATG 3 cut(s) 304, 579, 1163
FauI CCCGC 5 cut(s) 193, 293, 343, 607, 929
FbaI TGATCA 2 cut(s) 54, 570
FokI GGATG 5 cut(s) 418, 811, 934, 1390, 1487
FriOI GRGCYC 2 cut(s) 186, 621
FspBI CTAG 3 cut(s) 1200, 1242, 1275
GlaI GCGC 3 cut(s) 613, 814, 1115
HaeIII GGCC 9 cut(s) 204, 209, 222, 345, 350, 393, 518, 591, 704
HgaI GACGC 2 cut(s) 770, 892
HhaI GCGC 3 cut(s) 614, 815, 1116
Hin1I GRCGYC 3 cut(s) 309, 330, 884
Hin1II CATG 3 cut(s) 308, 583, 1167
Hin6I GCGC 3 cut(s) 612, 813, 1114
HinP1I GCGC 3 cut(s) 612, 813, 1114
HinfI GANTC 8 cut(s) 17, 23, 110, 455, 875, 898, 1061, 1278
HphI GGTGA 6 cut(s) 64, 259, 304, 679, 893, 1393
Hpy166II GTNNAC 5 cut(s) 137, 381, 463, 532, 891
Hpy188I TCNGA 8 cut(s) 16, 22, 109, 370, 685, 979, 1456, 1522
Hpy188III TCNNGA 9 cut(s) 27, 100, 157, 173, 430, 553, 574, 772, 1338
Hpy8I GTNNAC 5 cut(s) 137, 381, 463, 532, 891
Hpy99I CGWCG 4 cut(s) 266, 284, 332, 764
HpyAV CCTTC 7 cut(s) 173, 325, 409, 799, 803, 811, 1248
HpyCH4III ACNGT 7 cut(s) 496, 512, 559, 598, 1083, 1171, 1304
HpyCH4IV ACGT 5 cut(s) 309, 330, 534, 567, 678
HpyF3I CTNAG 4 cut(s) 437, 745, 794, 1371
HpySE526I ACGT 5 cut(s) 309, 330, 534, 567, 678
Hsp92I GRCGYC 3 cut(s) 309, 330, 884
Hsp92II CATG 3 cut(s) 308, 583, 1167
HspAI GCGC 3 cut(s) 612, 813, 1114
Kpn2I TCCGGA 1 cut(s) 26
KroI GCCGGC 1 cut(s) 341
KroNI GCCGGC 1 cut(s) 343
Ksp22I TGATCA 2 cut(s) 54, 570
Kzo9I GATC 7 cut(s) 54, 365, 570, 784, 1267, 1447, 1522
LmnI GCTCC 5 cut(s) 45, 181, 189, 240, 658
Lsp1109I GCAGC 6 cut(s) 45, 111, 396, 456, 648, 1392
LweI GCATC 4 cut(s) 267, 396, 423, 1374
MaeI CTAG 3 cut(s) 1200, 1242, 1275
MaeII ACGT 5 cut(s) 309, 330, 534, 567, 678
MaeIII GTNAC 3 cut(s) 265, 310, 1310
MalI GATC 7 cut(s) 56, 367, 572, 786, 1269, 1449, 1524
MboI GATC 7 cut(s) 54, 365, 570, 784, 1267, 1447, 1522
MboII GAAGA 8 cut(s) 496, 763, 1070, 1353, 1356, 1489, 1492, 1495
MfeI CAATTG 1 cut(s) 960
MflI RGATCY 3 cut(s) 365, 1447, 1522
MhlI GDGCHC 3 cut(s) 186, 429, 621
MluCI AATT 4 cut(s) 5, 960, 965, 1022
MluI ACGCGT 1 cut(s) 84
MlyI GAGTC 4 cut(s) 104, 449, 892, 1070
MmeI TCCRAC 6 cut(s) 393, 663, 957, 978, 1295, 1425
Mph1103I ATGCAT 1 cut(s) 1389
MroI TCCGGA 1 cut(s) 26
MroNI GCCGGC 1 cut(s) 341
MroXI GAANNNNTTC 1 cut(s) 755
MseI TTAA 2 cut(s) 860, 1212
MslI CAYNNNNRTG 1 cut(s) 578
MspA1I CMGCKG 2 cut(s) 36, 124
MspR9I CCNGG 8 cut(s) 132, 179, 206, 347, 395, 520, 696, 706
MunI CAATTG 1 cut(s) 960
Mva1269I GAATGC 2 cut(s) 1387, 1408
MvaI CCWGG 1 cut(s) 206
MvnI CGCG 7 cut(s) 86, 200, 288, 327, 614, 764, 815
NaeI GCCGGC 1 cut(s) 343
NciI CCSGG 7 cut(s) 132, 179, 347, 395, 520, 696, 706
NdeII GATC 7 cut(s) 54, 365, 570, 784, 1267, 1447, 1522
NgoMIV GCCGGC 1 cut(s) 341
NlaIII CATG 3 cut(s) 308, 583, 1167
NlaIV GGNNCC 7 cut(s) 135, 161, 177, 247, 367, 383, 590
NmeAIII GCCGAG 1 cut(s) 222
NmuCI GTSAC 3 cut(s) 265, 310, 1310
NsiI ATGCAT 1 cut(s) 1389
NspI RCATGY 2 cut(s) 583, 1167
PcsI WCGNNNNNNNCGW 3 cut(s) 324, 366, 768
PctI GAATGC 2 cut(s) 1387, 1408
PdiI GCCGGC 1 cut(s) 343
PdmI GAANNNNTTC 1 cut(s) 755
PfeI GAWTC 4 cut(s) 17, 23, 875, 1278
Pfl23II CGTACG 2 cut(s) 357, 387
PflFI GACNNNGTC 1 cut(s) 458
PleI GAGTC 4 cut(s) 104, 449, 892, 1069
PpsI GAGTC 4 cut(s) 104, 449, 892, 1069
PpuMI RGGWCCY 1 cut(s) 292
Psp124BI GAGCTC 1 cut(s) 186
Psp5II RGGWCCY 1 cut(s) 292
Psp6I CCWGG 1 cut(s) 204
PspGI CCWGG 1 cut(s) 204
PspLI CGTACG 2 cut(s) 357, 387
PspN4I GGNNCC 7 cut(s) 135, 161, 177, 247, 367, 383, 590
PspPPI RGGWCCY 1 cut(s) 292
PsuI RGATCY 3 cut(s) 365, 1447, 1522
PsyI GACNNNGTC 1 cut(s) 458
RsaI GTAC 4 cut(s) 83, 359, 389, 1085
RsaNI GTAC 4 cut(s) 82, 358, 388, 1084
RseI CAYNNNNRTG 1 cut(s) 578
SacI GAGCTC 1 cut(s) 186
SaqAI TTAA 2 cut(s) 860, 1212
Sau3AI GATC 7 cut(s) 54, 365, 570, 784, 1267, 1447, 1522
SchI GAGTC 4 cut(s) 104, 449, 892, 1070
ScrFI CCNGG 8 cut(s) 132, 179, 206, 347, 395, 520, 696, 706
SduI GDGCHC 3 cut(s) 186, 429, 621
SfaNI GCATC 4 cut(s) 267, 396, 423, 1374
SfcI CTRYAG 1 cut(s) 1032
SgrAI CRCCGGYG 1 cut(s) 526
SinI GGWCC 8 cut(s) 38, 134, 175, 292, 301, 381, 460, 484
SmiMI CAYNNNNRTG 1 cut(s) 578
SmlI CTYRAG 2 cut(s) 296, 428
SmoI CTYRAG 2 cut(s) 296, 428
Sse9I AATT 4 cut(s) 5, 960, 965, 1022
SspMI CTAG 3 cut(s) 1200, 1242, 1275
SstI GAGCTC 1 cut(s) 186
StyD4I CCNGG 8 cut(s) 130, 177, 204, 345, 393, 518, 694, 704
StyI CCWWGG 2 cut(s) 41, 1511
TaaI ACNGT 7 cut(s) 496, 512, 559, 598, 1083, 1171, 1304
TaiI ACGT 5 cut(s) 312, 333, 537, 570, 681
TaqI TCGA 3 cut(s) 453, 759, 771
TaqII GACCGA 1 cut(s) 448
TasI AATT 4 cut(s) 5, 960, 965, 1022
TauI GCSGC 5 cut(s) 124, 130, 341, 353, 475
TfiI GAWTC 4 cut(s) 17, 23, 875, 1278
Tru1I TTAA 2 cut(s) 860, 1212
Tru9I TTAA 2 cut(s) 860, 1212
TscAI CASTG 5 cut(s) 1101, 1116, 1174, 1309, 1407
TseFI GTSAC 3 cut(s) 265, 310, 1310
TseI GCWGC 6 cut(s) 33, 124, 409, 469, 661, 1405
Tsp45I GTSAC 3 cut(s) 265, 310, 1310
TspDTI ATGAA 3 cut(s) 578, 1001, 1115
TspGWI ACGGA 4 cut(s) 268, 375, 671, 956
TspRI CASTG 5 cut(s) 1101, 1116, 1174, 1309, 1407
Tth111I GACNNNGTC 1 cut(s) 458
VpaK11BI GGWCC 8 cut(s) 38, 134, 175, 292, 301, 381, 460, 484
XapI RAATTY 2 cut(s) 5, 965
XceI RCATGY 2 cut(s) 583, 1167
XmnI GAANNNNTTC 1 cut(s) 755
XspI CTAG 3 cut(s) 1200, 1242, 1275
ZraI GACGTC 2 cut(s) 310, 331
Zsp2I ATGCAT 1 cut(s) 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.