FvH4_7g21250

Protein-tyrosine-phosphatase MKP1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0012651
Physical Location & Seq
Forward (+)
17090624 .. 17095539
4916 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g21250.t1

Sequence Viewer

Length: 2544 bp
ATGGTGGATAGTGAGGATGTTTCAGCTAGTTCTCGGGCTCCGGTCCCACTCTCCGGCTCGCGGAAAATGTTCTGGCGGTCTGCTTCATGGTCTGCTTCAAGGACCGCGGTGCACAACCCTGAGAGTGAGGAGAAGGACCTTGCGGATCCAAATGCTGGTGCCGGGAGCAGTAATGGGCAGGCTCACCGTAGGTTTCCTGTTCCGCTGACGCCGCGGTCTCAGCAGAGTAGTAAGGCTAGGTCTGGTTTGCCTCCGTTGCAGTTGCCTATTGCTAGGCGTAGCTTGGATGAGTGGCCCAAGGCAGGTTCGGATGATATTGGTGAGTGGCCACAGCCTCCTACTCCGAGTGGGAGAGGCGGTGGGGAGAGGTTGAAACTTGATTTGTCAACCATTCAGAACAACCCGGCAAAGAATGGTGGGCTTGTGAGGAGGGATAAGATTGCTTTCTTTGACAAGGAGTGTTCGAAAGTGGCTCAACACATTTATCTTGGTGGGGATGCCGTTGCGAAGGACAGAGACATTCTTAAGCAGAATGGGATAACCCATGTTCTGAATTGCGTGGGTTTTGTTTGTCCCGAGTATTTCAAGGCAGACTTTGTGTATAGAACTCTATGGTTGCAAGATAGTCCTACGGAGGATATTACTAGTATTCTGTATGATGTTTTTGATTACTTTGAAGATGTTAGGGAACAAGGTGGAAGGGTTTTTGTTCATTGTTGTCAAGGGGTGTCTCGGTCCACATCATTGGTGATTGCTTATCTTATGTGGAGAGAAGGACAAAGTTTTGATGATGCATTCCAGTATGTGAAAGCAGCTAGAGGAATTGCTGATCCAAATATGGGCTTTGCTTGTCAGTTATTACAGTGTCAGAAAAGAGTCCATGCTTTCCCTCTTAGCCCAAGTTCACTATTGAGGATATACAGAATTGCCCCACATTCACCGTATGATCCATTGCATCTTGTCCCCAAAATGCTGAATAATCCGTCTCCTTCTGCTCTGGATTCTAGAGGTGCGTTTATCGTTCATACACCTTCGGCAATCTATCTTTGGATTGGTAAGAATTGTGAGGTTATCATGGAAAGGGATGCAAGAGGGGCTGTTTGTCAGATTGTTCGGTATGAGAGAGTACAAGGCCCAATAACAATAATCAAGGAAGGGGAAGAGCCTGCTTACTTTTGGGATGCTTTCTCAAACCTTTTACCCTTGATGGAGAAATCTGGCAATGGAGTAGAGGTTGGGGAGTCAAAAGATAAGATTCGTCCTGGTGAAAGGAAGTCAGACACCTATAATATTGATTTCGAAATTTTCCATAAAGCTATTATGGGAGGTTTTGTACCTCCATTTGCATCCTCGGAAAATGAACATGAAACTCATCTTCCTGCTAGAGAGAGCAGCTGGAGTGCACTCAGGCGTAAGTTTGCCTCAGGAAACATGAAGGAGTTTGTCTCAGCACCCCGGTTATCTCTCACCAGGGTCTATTCAGATTCCATGATGTTTCTTCAGTCTGCTAAAAGTTCTATATCACCTTCAGCCGCACACTCTTCATCTTCCTCAACCTCTTCTTCCTCACCTCCATATCTGTCACCAGATTCCATTTCTTCTGATTCAAGCACTAGTTCAAAATACTTCTCGGAATCCTCTCTGGATTCTCCATCTCCAGCTTCCCGTTCCCTACCGGTATCATCAACATTGACAAATTGCTCTGACATGTCTCCCCTTTCCTCTAGATCTTCTGATCAACCCATGTCTAACAATCCAGAAAAAGTTGTTTCCAGTTTTAGTTCACAGGCCAGTTCTCGGTCAACCCCAATAACATCTAAAAAGTTGTCATCTTCACTTGCGGAGCGTAGAGGTAGCCTGTCAAAGTCTCTCAAATTACCTGTGATGAGTTTGAATACTTCCTCAAAAATTATACCTAGTGAAGAAGGTGGTGTTGGGATAACTGATAGTACTTGTTTAGTACATGGTAAGAATAATGTTGGCAATGTCTTAGAGTCAAAGGATGGTGTTGAGAATGGCGGGGAAGGTTCAACACCACAATGCAGTATAGTGCTGGGTAAGGCAGATGACTCATGCCGAAGGGAAGTTTCTCTTATCAAACACAGTCCTGAATCGTGGAGAAAATGCCTTTCTGGAGAAGCTGCAGAATCCTCTGCCTCAAAGAAGATGGGGGCAAGTTGTCCTCTGCAATCTAATTCCATGCAACCTTTTGTATGCCACTGGCCCAGTTTAGAGAAGATAGCAACATTTGGTGTGAGTGAACTAGATTCTAAAGCTGCGTTTGCTATTTTCTCACCAAATAGAGACTTAAGTAAAAGTGAAGGAAGGATTTTGTATCTATGGGTAGGAAGGTTTTTTGACAATGGTAATATTCAGATTCAATTAGAAAGTGACAAAAACAGAACTGATAAAGAAGAGATTGACTGGGACCAAGTTGGTTCTGATATCCTCATCCAAACAGGCCTGCCGAAGGACACGATTGTTAAGATTGTTAAAGAGAATGAAGAACCAGTGGAATTTTTGAGGTTATTGAGTCTGTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000188 GO:0001704 GO:0001706 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006464 GO:0006469 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0007369 GO:0007492 GO:0008138 GO:0008150 GO:0008152 GO:0008330 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009651 GO:0009653 GO:0009790 GO:0009888 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010224 GO:0010225 GO:0010563 GO:0010605 GO:0010646 GO:0010648 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0017017 GO:0019220 GO:0019222 GO:0019538 GO:0023051 GO:0023057 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0033549 GO:0033673 GO:0035335 GO:0035970 GO:0036211 GO:0042325 GO:0042326 GO:0042578 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043405 GO:0043407 GO:0043408 GO:0043409 GO:0043412 GO:0043549 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045859 GO:0045936 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048598 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051338 GO:0051348 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0070372 GO:0070373 GO:0071704 GO:0071900 GO:0071901 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902532 GO:1990439
KEGG Pathways
Metabolic & Signaling
ko04010 ko04726 ko05418 map04010 map04726 map05418
Pfam Domains
Protein Families
DSPc

Protein Analysis

848

Amino Acids

92.83

Weight (kDa)

6.63

Isoelectric Point (pI)

60.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DSPc PF00782 161 - 291 9.1e-27 Dual specificity phosphatase, catalytic domain
MPK1_gelsolin_C PF25466 740 - 844 1.4e-37 MPK1 gelsolin domain C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 214
Acc36I ACCTGC 1 cut(s) 293
AccB1I GGYRCC 1 cut(s) 158
AccB7I CCANNNNNTGG 1 cut(s) 155
AccII CGCG 3 cut(s) 61, 107, 214
AclWI GGATC 4 cut(s) 140, 153, 824, 941
AcoI YGGCCR 1 cut(s) 326
AcsI RAATTY 2 cut(s) 1302, 2516
AcuI CTGAAG 2 cut(s) 1484, 1512
AcyI GRCGYC 1 cut(s) 209
AfaI GTAC 4 cut(s) 1128, 1335, 1951, 1962
AfiI CCNNNNNNNGG 7 cut(s) 53, 60, 155, 302, 839, 1797, 2470
AflII CTTAAG 2 cut(s) 524, 2308
AflIII ACRYGT 1 cut(s) 1707
AgeI ACCGGT 1 cut(s) 1675
AgsI TTSAA 9 cut(s) 99, 373, 586, 677, 1608, 1620, 1894, 2031, 2381
AhlI ACTAGT 2 cut(s) 644, 1613
AjnI CCWGG 2 cut(s) 1261, 1469
AjuI GAANNNNNNNTTGG 2 cut(s) 1917, 1949
AluBI AGCT 8 cut(s) 26, 282, 815, 1316, 1395, 1661, 2141, 2276
AluI AGCT 8 cut(s) 26, 282, 815, 1316, 1395, 1661, 2141, 2276
Alw21I GWGCWC 2 cut(s) 114, 1405
Alw26I GTCTC 8 cut(s) 222, 510, 735, 990, 1450, 1716, 1872, 2298
Alw44I GTGCAC 2 cut(s) 110, 1401
AlwI GGATC 4 cut(s) 140, 153, 824, 941
Ama87I CYCGRG 2 cut(s) 33, 575
AoxI GGCC 6 cut(s) 293, 326, 1132, 1788, 2222, 2461
ApaLI GTGCAC 2 cut(s) 110, 1401
ApeKI GCWGC 4 cut(s) 812, 1392, 2141, 2276
ApoI RAATTY 2 cut(s) 1302, 2516
AsiGI ACCGGT 1 cut(s) 1675
Asp700I GAANNNNTTC 1 cut(s) 68
AspS9I GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2223, 2428
AsuC2I CCSGG 3 cut(s) 163, 404, 1456
AsuII TTCGAA 2 cut(s) 464, 1299
AvaI CYCGRG 2 cut(s) 33, 575
AvaII GGWCC 5 cut(s) 43, 102, 136, 735, 2428
AxyI CCTNAGG 1 cut(s) 1423
BaeGI GKGCMC 2 cut(s) 114, 1405
BalI TGGCCA 1 cut(s) 328
BamHI GGATCC 1 cut(s) 145
BanI GGYRCC 1 cut(s) 158
BanII GRGCYC 1 cut(s) 40
Bbv12I GWGCWC 2 cut(s) 114, 1405
BbvI GCAGC 4 cut(s) 824, 1404, 2128, 2263
BccI CCATC 4 cut(s) 1201, 1660, 1997, 2161
BceAI ACGGC 1 cut(s) 485
BciT130I CCWGG 2 cut(s) 1263, 1471
BclI TGATCA 1 cut(s) 1735
BcnI CCSGG 3 cut(s) 163, 404, 1456
BcoDI GTCTC 8 cut(s) 222, 510, 735, 990, 1450, 1716, 1872, 2298
BcuI ACTAGT 2 cut(s) 644, 1613
BfmI CTRYAG 1 cut(s) 2142
BfrI CTTAAG 2 cut(s) 524, 2308
BfuAI ACCTGC 1 cut(s) 293
BglII AGATCT 1 cut(s) 1727
BisI GCNGC 6 cut(s) 212, 813, 1393, 1533, 2142, 2277
BlsI GCNGC 6 cut(s) 213, 814, 1394, 1534, 2143, 2278
BmcAI AGTACT 1 cut(s) 1951
Bme1390I CCNGG 5 cut(s) 163, 404, 1263, 1456, 1471
Bme18I GGWCC 5 cut(s) 43, 102, 136, 735, 2428
BmeT110I CYCGRG 2 cut(s) 33, 575
BmgT120I GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2223, 2428
BmiI GGNNCC 5 cut(s) 39, 45, 147, 160, 2429
BmrFI CCNGG 5 cut(s) 163, 404, 1263, 1456, 1471
BmrI ACTGGG 2 cut(s) 2220, 2434
BmsI GCATC 6 cut(s) 487, 781, 964, 1075, 1171, 1355
BmuI ACTGGG 2 cut(s) 2220, 2434
BplI GAGNNNNNCTC 2 cut(s) 1430, 1462
BpmI CTGGAG 3 cut(s) 1417, 1641, 2154
Bpu14I TTCGAA 2 cut(s) 464, 1299
BpuMI CCSGG 3 cut(s) 163, 404, 1456
BsaHI GRCGYC 1 cut(s) 209
BsaI GGTCTC 1 cut(s) 222
BsaJI CCNNGG 6 cut(s) 105, 212, 297, 1350, 1454, 1470
BsaWI WCCGGW 2 cut(s) 40, 1675
BsaXI ACNNNNNCTCC 6 cut(s) 343, 373, 1218, 1248, 1317, 1347
Bsc4I CCNNNNNNNGG 7 cut(s) 53, 60, 155, 302, 839, 1797, 2470
Bse118I RCCGGY 1 cut(s) 1675
Bse1I ACTGG 7 cut(s) 799, 1773, 1791, 2225, 2226, 2429, 2510
Bse21I CCTNAGG 1 cut(s) 1423
Bse3DI GCAATG 3 cut(s) 950, 1228, 1990
BseBI CCWGG 2 cut(s) 1263, 1471
BseDI CCNNGG 6 cut(s) 105, 212, 297, 1350, 1454, 1470
BseGI GGATG 9 cut(s) 22, 292, 316, 502, 1090, 1186, 1346, 2008, 2451
BseLI CCNNNNNNNGG 7 cut(s) 53, 60, 155, 302, 839, 1797, 2470
BseMI GCAATG 3 cut(s) 950, 1228, 1990
BseMII CTCAG 5 cut(s) 111, 233, 1420, 1437, 1461
BseNI ACTGG 7 cut(s) 799, 1773, 1791, 2225, 2226, 2429, 2510
BseRI GAGGAG 2 cut(s) 143, 442
BseSI GKGCMC 2 cut(s) 114, 1405
BseXI GCAGC 4 cut(s) 824, 1404, 2128, 2263
BseYI CCCAGC 1 cut(s) 2053
Bsh1236I CGCG 3 cut(s) 61, 107, 214
BshFI GGCC 6 cut(s) 295, 328, 1134, 1790, 2224, 2463
BshNI GGYRCC 1 cut(s) 158
BshTI ACCGGT 1 cut(s) 1675
BsiHKAI GWGCWC 2 cut(s) 114, 1405
BsiHKCI CYCGRG 2 cut(s) 33, 575
BsiSI CCGG 6 cut(s) 41, 54, 162, 404, 1456, 1676
BslFI GGGAC 4 cut(s) 29, 558, 947, 2441
BslI CCNNNNNNNGG 7 cut(s) 53, 60, 155, 302, 839, 1797, 2470
BsmAI GTCTC 8 cut(s) 222, 510, 735, 990, 1450, 1716, 1872, 2298
BsmBI CGTCTC 1 cut(s) 990
BsmFI GGGAC 4 cut(s) 29, 558, 947, 2441
BsmI GAATGC 1 cut(s) 794
BsnI GGCC 6 cut(s) 295, 328, 1134, 1790, 2224, 2463
Bso31I GGTCTC 1 cut(s) 222
BsoBI CYCGRG 2 cut(s) 33, 575
Bsp119I TTCGAA 2 cut(s) 464, 1299
Bsp1286I GDGCHC 3 cut(s) 40, 114, 1405
Bsp143I GATC 5 cut(s) 145, 829, 946, 1727, 1735
BspANI GGCC 6 cut(s) 295, 328, 1134, 1790, 2224, 2463
BspCNI CTCAG 5 cut(s) 112, 232, 1419, 1436, 1460
BspFNI CGCG 3 cut(s) 61, 107, 214
BspLI GGNNCC 5 cut(s) 39, 45, 147, 160, 2429
BspMAI CTGCAG 1 cut(s) 2146
BspMI ACCTGC 1 cut(s) 293
BspPI GGATC 4 cut(s) 140, 153, 824, 941
BspQI GCTCTTC 1 cut(s) 1155
BspT104I TTCGAA 2 cut(s) 464, 1299
BspT107I GGYRCC 1 cut(s) 158
BspTI CTTAAG 2 cut(s) 524, 2308
BspTNI GGTCTC 1 cut(s) 222
BsrDI GCAATG 3 cut(s) 950, 1228, 1990
BsrFI RCCGGY 1 cut(s) 1675
BsrI ACTGG 7 cut(s) 799, 1773, 1791, 2225, 2226, 2429, 2510
BssAI RCCGGY 1 cut(s) 1675
BssECI CCNNGG 6 cut(s) 105, 212, 297, 1350, 1454, 1470
BssMI GATC 5 cut(s) 145, 829, 946, 1727, 1735
BssNI GRCGYC 1 cut(s) 209
BssT1I CCWWGG 1 cut(s) 297
Bst2UI CCWGG 2 cut(s) 1263, 1471
Bst4CI ACNGT 4 cut(s) 188, 864, 942, 2105
Bst6I CTCTTC 4 cut(s) 1155, 1546, 1564, 2409
BstACI GRCGYC 1 cut(s) 209
BstAFI CTTAAG 2 cut(s) 524, 2308
BstBI TTCGAA 2 cut(s) 464, 1299
BstC8I GCNNGC 4 cut(s) 59, 180, 1167, 2465
BstDEI CTNAG 7 cut(s) 120, 219, 893, 1406, 1423, 1447, 1990
BstDSI CCRYGG 2 cut(s) 105, 212
BstENI CCTNNNNNAGG 1 cut(s) 2468
BstF5I GGATG 9 cut(s) 22, 292, 316, 502, 1090, 1186, 1346, 2008, 2451
BstFNI CGCG 3 cut(s) 61, 107, 214
BstKTI GATC 5 cut(s) 148, 832, 949, 1730, 1738
BstMAI GTCTC 8 cut(s) 222, 510, 735, 990, 1450, 1716, 1872, 2298
BstMBI GATC 5 cut(s) 145, 829, 946, 1727, 1735
BstMWI GCNNNNNNNGC 5 cut(s) 211, 220, 256, 1094, 2282
BstNI CCWGG 2 cut(s) 1263, 1471
BstNSI RCATGY 1 cut(s) 1711
BstSCI CCNGG 5 cut(s) 161, 402, 1261, 1454, 1469
BstSFI CTRYAG 1 cut(s) 2142
BstSLI GKGCMC 2 cut(s) 114, 1405
BstUI CGCG 3 cut(s) 61, 107, 214
BstV1I GCAGC 4 cut(s) 824, 1404, 2128, 2263
BstX2I RGATCY 2 cut(s) 145, 1727
BstXI CCANNNNNNTGG 1 cut(s) 745
BstYI RGATCY 2 cut(s) 145, 1727
Bsu36I CCTNAGG 1 cut(s) 1423
BsuRI GGCC 6 cut(s) 295, 328, 1134, 1790, 2224, 2463
BtgI CCRYGG 2 cut(s) 105, 212
BtsCI GGATG 9 cut(s) 22, 292, 316, 502, 1090, 1186, 1346, 2008, 2451
BtsIMutI CAGTG 3 cut(s) 869, 2218, 2517
BveI ACCTGC 1 cut(s) 293
Cac8I GCNNGC 4 cut(s) 59, 180, 1167, 2465
Cfr10I RCCGGY 1 cut(s) 1675
Cfr13I GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2223, 2428
Cfr42I CCGCGG 2 cut(s) 108, 215
CseI GACGC 1 cut(s) 217
Csp6I GTAC 4 cut(s) 1127, 1334, 1950, 1961
CspAI ACCGGT 1 cut(s) 1675
CviQI GTAC 4 cut(s) 1127, 1334, 1950, 1961
DdeI CTNAG 7 cut(s) 120, 219, 893, 1406, 1423, 1447, 1990
DpnI GATC 5 cut(s) 147, 831, 948, 1729, 1737
DpnII GATC 5 cut(s) 145, 829, 946, 1727, 1735
DrdI GACNNNNNNGTC 1 cut(s) 214
DseDI GACNNNNNNGTC 1 cut(s) 214
EaeI YGGCCR 1 cut(s) 326
Eam1104I CTCTTC 4 cut(s) 1155, 1546, 1564, 2409
EarI CTCTTC 4 cut(s) 1155, 1546, 1564, 2409
Eco130I CCWWGG 1 cut(s) 297
Eco147I AGGCCT 1 cut(s) 2463
Eco24I GRGCYC 1 cut(s) 40
Eco31I GGTCTC 1 cut(s) 222
Eco32I GATATC 1 cut(s) 2446
Eco47I GGWCC 5 cut(s) 43, 102, 136, 735, 2428
Eco57I CTGAAG 2 cut(s) 1484, 1512
Eco81I CCTNAGG 1 cut(s) 1423
Eco88I CYCGRG 2 cut(s) 33, 575
EcoNI CCTNNNNNAGG 1 cut(s) 2468
EcoO109I RGGNCCY 1 cut(s) 136
EcoRII CCWGG 2 cut(s) 1261, 1469
EcoRV GATATC 1 cut(s) 2446
EcoT14I CCWWGG 1 cut(s) 297
EcoT22I ATGCAT 1 cut(s) 796
EcoT38I GRGCYC 1 cut(s) 40
ErhI CCWWGG 1 cut(s) 297
Esp3I CGTCTC 1 cut(s) 990
FalI AAGNNNNNCTT 4 cut(s) 578, 610, 2076, 2108
FaqI GGGAC 4 cut(s) 29, 558, 947, 2441
FauI CCCGC 1 cut(s) 2012
FbaI TGATCA 1 cut(s) 1735
Fnu4HI GCNGC 6 cut(s) 212, 813, 1393, 1533, 2142, 2277
FokI GGATG 9 cut(s) 29, 299, 323, 509, 1097, 1193, 1333, 2015, 2438
FriOI GRGCYC 1 cut(s) 40
Fsp4HI GCNGC 6 cut(s) 212, 813, 1393, 1533, 2142, 2277
GluI GCNGC 6 cut(s) 212, 813, 1393, 1533, 2142, 2277
GsaI CCCAGC 1 cut(s) 2057
GsuI CTGGAG 3 cut(s) 1417, 1641, 2154
HaeIII GGCC 6 cut(s) 295, 328, 1134, 1790, 2224, 2463
HapII CCGG 6 cut(s) 41, 54, 162, 404, 1456, 1676
HgaI GACGC 1 cut(s) 217
Hin1I GRCGYC 1 cut(s) 209
HincII GTYRAC 2 cut(s) 387, 1803
HindII GTYRAC 2 cut(s) 387, 1803
HpaII CCGG 6 cut(s) 41, 54, 162, 404, 1456, 1676
Hpy166II GTNNAC 8 cut(s) 112, 387, 738, 905, 1403, 1784, 1803, 2261
Hpy188III TCNNGA 9 cut(s) 575, 998, 1005, 1425, 1643, 1725, 1757, 2108, 2133
Hpy8I GTNNAC 8 cut(s) 112, 387, 738, 905, 1403, 1784, 1803, 2261
HpyCH4III ACNGT 4 cut(s) 188, 864, 942, 2105
HpyF10VI GCNNNNNNNGC 5 cut(s) 211, 220, 256, 1094, 2282
HpyF3I CTNAG 7 cut(s) 120, 219, 893, 1406, 1423, 1447, 1990
Hsp92I GRCGYC 1 cut(s) 209
Ksp22I TGATCA 1 cut(s) 1735
KspI CCGCGG 2 cut(s) 108, 215
Kzo9I GATC 5 cut(s) 145, 829, 946, 1727, 1735
LguI GCTCTTC 1 cut(s) 1155
LmnI GCTCC 3 cut(s) 43, 165, 1843
Lsp1109I GCAGC 4 cut(s) 824, 1404, 2128, 2263
LweI GCATC 6 cut(s) 487, 781, 964, 1075, 1171, 1355
MaeIII GTNAC 2 cut(s) 1581, 2390
MalI GATC 5 cut(s) 147, 831, 948, 1729, 1737
MboI GATC 5 cut(s) 145, 829, 946, 1727, 1735
MflI RGATCY 2 cut(s) 145, 1727
MhlI GDGCHC 3 cut(s) 40, 114, 1405
MlsI TGGCCA 1 cut(s) 328
MluNI TGGCCA 1 cut(s) 328
MlyI GAGTC 5 cut(s) 885, 1250, 2003, 2063, 2542
Mox20I TGGCCA 1 cut(s) 328
Mph1103I ATGCAT 1 cut(s) 796
MroXI GAANNNNTTC 1 cut(s) 68
MscI TGGCCA 1 cut(s) 328
MseI TTAA 4 cut(s) 525, 2309, 2484, 2493
MslI CAYNNNNRTG 1 cut(s) 2038
Msp20I TGGCCA 1 cut(s) 328
MspA1I CMGCKG 4 cut(s) 107, 205, 214, 1395
MspCI CTTAAG 2 cut(s) 524, 2308
MspI CCGG 6 cut(s) 41, 54, 162, 404, 1456, 1676
MspR9I CCNGG 5 cut(s) 163, 404, 1263, 1456, 1471
Mva1269I GAATGC 1 cut(s) 794
MvaI CCWGG 2 cut(s) 1263, 1471
MvnI CGCG 3 cut(s) 61, 107, 214
MwoI GCNNNNNNNGC 5 cut(s) 211, 220, 256, 1094, 2282
NciI CCSGG 3 cut(s) 163, 404, 1456
NdeII GATC 5 cut(s) 145, 829, 946, 1727, 1735
NlaIV GGNNCC 5 cut(s) 39, 45, 147, 160, 2429
NmuCI GTSAC 2 cut(s) 1581, 2390
NsiI ATGCAT 1 cut(s) 796
NspI RCATGY 1 cut(s) 1711
NspV TTCGAA 2 cut(s) 464, 1299
PceI AGGCCT 1 cut(s) 2463
PciI ACATGT 1 cut(s) 1707
PciSI GCTCTTC 1 cut(s) 1155
PctI GAATGC 1 cut(s) 794
PdmI GAANNNNTTC 1 cut(s) 68
PflMI CCANNNNNTGG 1 cut(s) 155
PinAI ACCGGT 1 cut(s) 1675
PkrI GCNGC 6 cut(s) 213, 814, 1394, 1534, 2143, 2278
PleI GAGTC 5 cut(s) 884, 1249, 2002, 2063, 2541
PpsI GAGTC 5 cut(s) 884, 1249, 2002, 2063, 2541
PpuMI RGGWCCY 1 cut(s) 136
PscI ACATGT 1 cut(s) 1707
Psp5II RGGWCCY 1 cut(s) 136
Psp6I CCWGG 2 cut(s) 1261, 1469
PspFI CCCAGC 1 cut(s) 2053
PspGI CCWGG 2 cut(s) 1261, 1469
PspN4I GGNNCC 5 cut(s) 39, 45, 147, 160, 2429
PspPI GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2223, 2428
PspPPI RGGWCCY 1 cut(s) 136
PstI CTGCAG 1 cut(s) 2146
PsuI RGATCY 2 cut(s) 145, 1727
PvuII CAGCTG 1 cut(s) 1395
RsaI GTAC 4 cut(s) 1128, 1335, 1951, 1962
RsaNI GTAC 4 cut(s) 1127, 1334, 1950, 1961
RseI CAYNNNNRTG 1 cut(s) 2038
SacII CCGCGG 2 cut(s) 108, 215
SapI GCTCTTC 1 cut(s) 1155
SaqAI TTAA 4 cut(s) 525, 2309, 2484, 2493
SatI GCNGC 6 cut(s) 212, 813, 1393, 1533, 2142, 2277
Sau3AI GATC 5 cut(s) 145, 829, 946, 1727, 1735
Sau96I GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2223, 2428
ScaI AGTACT 1 cut(s) 1951
SchI GAGTC 5 cut(s) 885, 1250, 2003, 2063, 2542
ScrFI CCNGG 5 cut(s) 163, 404, 1263, 1456, 1471
SduI GDGCHC 3 cut(s) 40, 114, 1405
SfaNI GCATC 6 cut(s) 487, 781, 964, 1075, 1171, 1355
SfcI CTRYAG 1 cut(s) 2142
Sfr303I CCGCGG 2 cut(s) 108, 215
SfuI TTCGAA 2 cut(s) 464, 1299
SgrBI CCGCGG 2 cut(s) 108, 215
SinI GGWCC 5 cut(s) 43, 102, 136, 735, 2428
SmiMI CAYNNNNRTG 1 cut(s) 2038
SmlI CTYRAG 2 cut(s) 524, 2308
SmoI CTYRAG 2 cut(s) 524, 2308
SpeI ACTAGT 2 cut(s) 644, 1613
SseBI AGGCCT 1 cut(s) 2463
SspI AATATT 2 cut(s) 1291, 2371
StuI AGGCCT 1 cut(s) 2463
StyD4I CCNGG 5 cut(s) 161, 402, 1261, 1454, 1469
StyI CCWWGG 1 cut(s) 297
TaaI ACNGT 4 cut(s) 188, 864, 942, 2105
TaqI TCGA 2 cut(s) 464, 1299
TaqII GACCGA 2 cut(s) 723, 1788
TatI WGTACW 3 cut(s) 1126, 1949, 1960
TauI GCSGC 2 cut(s) 214, 1535
Tru1I TTAA 4 cut(s) 525, 2309, 2484, 2493
Tru9I TTAA 4 cut(s) 525, 2309, 2484, 2493
TscAI CASTG 3 cut(s) 869, 2225, 2517
TseFI GTSAC 2 cut(s) 1581, 2390
TseI GCWGC 4 cut(s) 812, 1392, 2141, 2276
Tsp45I GTSAC 2 cut(s) 1581, 2390
TspDTI ATGAA 8 cut(s) 75, 701, 1013, 1374, 1380, 1448, 1533, 2517
TspGWI ACGGA 3 cut(s) 243, 647, 972
TspRI CASTG 3 cut(s) 869, 2225, 2517
Van91I CCANNNNNTGG 1 cut(s) 155
Vha464I CTTAAG 2 cut(s) 524, 2308
VneI GTGCAC 2 cut(s) 110, 1401
VpaK11BI GGWCC 5 cut(s) 43, 102, 136, 735, 2428
XagI CCTNNNNNAGG 1 cut(s) 2468
XapI RAATTY 2 cut(s) 1302, 2516
XbaI TCTAGA 2 cut(s) 1004, 1724
XceI RCATGY 1 cut(s) 1711
XmnI GAANNNNTTC 1 cut(s) 68
ZrmI AGTACT 1 cut(s) 1951
Zsp2I ATGCAT 1 cut(s) 796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.