Rmu_sc0002093.1_g000011

Protein-tyrosine-phosphatase MKP1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002093.1
OG0012651
Physical Location & Seq
Forward (+)
50061 .. 54117
4057 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002093.1_g000011.1.cds

Sequence Viewer

Length: 2646 bp
atggtggatagtgaggatgcctctgctagttctcgggctccggtcccgctttccggctcccggaaaatgttctggcgctcggcttcgtggtctgcttcgaggaccgcggctcacaaccctgagactgaggaaaaggaccttgcagatccaaatgcggctgcagggaacagtaatgggcagagtcaccgtaggtttcctgttccgttgaccccgcggtctcagcagaatagcaaggctaggtctggtttgccgcccttgcaattgcctattgctaggcgtagcttggatgagtggcccaaggcaggttcagatgatattggtgagtggccacagcctcctactccgagtgggagaggtggtggggagaggttgaaacttgatttgtcagccattcagaacaacccggcaaagaatggtgggcttgtgaggagggataagattgctttctttgacaaagagtgttcgaaagtggctcaacacatttatcttggtggggatgccgttgcgaaggacagagacattcttaagcagaatgggataacccatgttctcaattgtgtgggttttgtttgtcctgagtatttcaaggcagattttgtgtatagaactctatggttgcaggatagtcctacagaggatattactagtattctatatgatgtttttgattactttgaagatgttagggaacaaggtggaagggtttttgttcattgttgtcaaggggtgtctcggtccacatcattggtgattgcttatcttatgtggagagaaggacaaagttttgatgatgcatttcagtatgtgaaagcagctagaggtattgctgatccaaatatgggctttgcttgtcagttattacagtgtcagaagagagttcatgctttccctcttagcccaagttcactattgaggatatacagaattgccccgcattcgccatatgatcctttgcatcttgtccccaaaatgctgaataatccctcaccttctgctctggattctagaggtgcttttattgttcatataccttctgcaatctatctttggattggtaacaactgtgagcttatcatggaaagggatgcaagaggggctgtttgtcagattgttcggtatgagagagtgcaaggcccaataacaataatcaaggaaggggaagagcctgcttacttttgggatgctttttcaaaccttttacccttgatggataaatctggcaatggagtagaggttggggagtcaaaagataagattcgtccaggtgaaaggaagtcagacacatataatattgattttgaaattttccagaaagctattatgggaggttttgtacctccatttgcatcctcacaaaatgaacatgaaactcatcttcctgccagagagagcagctggagtgcactcaggcgtaagtttgcctcaggaaacatgaaggagtttgtctcagcaccccggttatctctcaccagggtctattcagattcaatgatgtttcttcagtctactaaaagttctatatcaccttcagttgcacactcttcatcttcatcgtcctctacttcctcacctccatatctgtcaccagattccatctcttctgattcaagcacttgttcaaagtacttttcagaatcctctctggattctccatctgcagcttcctgttcccttccggtatcatcaacattgccaaattgttctgacatgtctctcctctcccctagatcttcttatcaacccatgtctaaccaagaaaaagttgtttccaattttagttcacaggccagttctcggtcaaccccaataccatctaaaaagttatcatcttcacttgcagagcgtagaggtagcttgtcgaagtctctcaaattacctgtgatgagtttgaatacttcctcgaaaattcttcctaatgaagaaggtggtgtagggataaatgatagtacttgttttgtacatggcaagaacaatgttggcaatgtattacagtcaaaggatggtgttgaaaatggcggggaagattcaacaccacaatgcaacatagtgctgggtaaggcagatagtattgactcatgccaaagggaaacttctcttatcaaacatagtgctgaaccttggagaaattgccttcctggaggagctgcagaatcctccgcctcaaagaagatgggggcaagttgtcctgtgcaatctaattctatgcaaccttttgtatgccgctggcccagtttagagaagctagcaacatttggtgcaagtgaactagattctaaagctgtgtttgctattttctcaccaaatagagacttaggtaaaagtgaaggcaggattttgtatctatgggtaggaaggttttttgacaatggtaatcttcagattcaattagaaagtgacaaaaacagagctgatatagaagagattgactgggaccaagttggttctgatgtcctcatccaaacgggtctgccaaaggacacaatcattaagattgttaaagaaaatgaagaaccggtggaattttttgctccaactttttcagacatcaagatgaactcccgtggcaaaaaccaccgaggaggaggctgctttctaactgcatcgtggctaatcaactggttgtacagtgctgtaataccttggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000188 GO:0001704 GO:0001706 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006464 GO:0006469 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0007369 GO:0007492 GO:0008138 GO:0008150 GO:0008152 GO:0008330 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009651 GO:0009653 GO:0009790 GO:0009888 GO:0009892 GO:0009966 GO:0009968 GO:0009987 GO:0010224 GO:0010225 GO:0010563 GO:0010605 GO:0010646 GO:0010648 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0017017 GO:0019220 GO:0019222 GO:0019538 GO:0023051 GO:0023057 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0033549 GO:0033673 GO:0035335 GO:0035970 GO:0036211 GO:0042325 GO:0042326 GO:0042578 GO:0043086 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043405 GO:0043407 GO:0043408 GO:0043409 GO:0043412 GO:0043549 GO:0044092 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045859 GO:0045936 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048598 GO:0048646 GO:0048856 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051338 GO:0051348 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0070372 GO:0070373 GO:0071704 GO:0071900 GO:0071901 GO:0080090 GO:0140096 GO:1901564 GO:1902531 GO:1902532 GO:1990439
KEGG Pathways
Metabolic & Signaling
ko04010 ko04726 ko05418 map04010 map04726 map05418
Pfam Domains
Protein Families
DSPc

Protein Analysis

881

Amino Acids

96.73

Weight (kDa)

6.75

Isoelectric Point (pI)

57.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 214
Acc36I ACCTGC 1 cut(s) 293
AccI GTMKAC 1 cut(s) 1505
AccII CGCG 2 cut(s) 107, 214
AclWI GGATC 3 cut(s) 140, 824, 941
AcoI YGGCCR 1 cut(s) 326
AcsI RAATTY 3 cut(s) 1302, 1905, 2519
AcuI CTGAAG 3 cut(s) 1484, 1512, 2360
AfaI GTAC 5 cut(s) 1335, 1625, 1948, 1959, 2624
AfiI CCNNNNNNNGG 5 cut(s) 53, 60, 302, 839, 1794
AflII CTTAAG 1 cut(s) 524
AflIII ACRYGT 1 cut(s) 1707
AgeI ACCGGT 1 cut(s) 2512
AhlI ACTAGT 1 cut(s) 644
AjnI CCWGG 3 cut(s) 1261, 1469, 2134
Alw21I GWGCWC 1 cut(s) 1405
Alw26I GTCTC 8 cut(s) 116, 222, 510, 735, 1450, 1716, 1869, 2301
Alw44I GTGCAC 1 cut(s) 1401
AlwI GGATC 3 cut(s) 140, 824, 941
Ama87I CYCGRG 1 cut(s) 33
AoxI GGCC 5 cut(s) 293, 326, 1132, 1785, 2225
ApaLI GTGCAC 1 cut(s) 1401
ApeKI GCWGC 6 cut(s) 158, 812, 1392, 1658, 2144, 2586
ApoI RAATTY 3 cut(s) 1302, 1905, 2519
AsiGI ACCGGT 1 cut(s) 2512
Asp700I GAANNNNTTC 1 cut(s) 68
AspLEI GCGC 1 cut(s) 78
AspS9I GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2226, 2431
AsuC2I CCSGG 3 cut(s) 61, 404, 1456
AsuII TTCGAA 1 cut(s) 464
AsuNHI GCTAGC 1 cut(s) 2242
AvaI CYCGRG 1 cut(s) 33
AvaII GGWCC 5 cut(s) 43, 102, 136, 735, 2431
AxyI CCTNAGG 1 cut(s) 1423
BaeGI GKGCMC 1 cut(s) 1405
BalI TGGCCA 1 cut(s) 328
BanII GRGCYC 1 cut(s) 40
Bbv12I GWGCWC 1 cut(s) 1405
BbvI GCAGC 6 cut(s) 145, 824, 1404, 1670, 2131, 2573
BccI CCATC 6 cut(s) 1201, 1601, 1660, 1819, 1994, 2164
BceAI ACGGC 1 cut(s) 485
BciT130I CCWGG 3 cut(s) 1263, 1471, 2136
BcnI CCSGG 3 cut(s) 61, 404, 1456
BcoDI GTCTC 8 cut(s) 116, 222, 510, 735, 1450, 1716, 1869, 2301
BcuI ACTAGT 1 cut(s) 644
BfaI CTAG 9 cut(s) 27, 237, 273, 645, 816, 1005, 1725, 2243, 2267
BfmI CTRYAG 4 cut(s) 159, 630, 1656, 2145
BfoI RGCGCY 1 cut(s) 79
BfrI CTTAAG 1 cut(s) 524
BfuAI ACCTGC 1 cut(s) 293
BglII AGATCT 1 cut(s) 1727
BmcAI AGTACT 2 cut(s) 1625, 1948
Bme1390I CCNGG 6 cut(s) 61, 404, 1263, 1456, 1471, 2136
Bme18I GGWCC 5 cut(s) 43, 102, 136, 735, 2431
BmeT110I CYCGRG 1 cut(s) 33
BmgT120I GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2226, 2431
BmiI GGNNCC 4 cut(s) 39, 45, 58, 2432
BmrFI CCNGG 6 cut(s) 61, 404, 1263, 1456, 1471, 2136
BmrI ACTGGG 2 cut(s) 2223, 2437
BmsI GCATC 8 cut(s) 7, 487, 781, 964, 1075, 1171, 1355, 2609
BmtI GCTAGC 1 cut(s) 2246
BmuI ACTGGG 2 cut(s) 2223, 2437
BplI GAGNNNNNCTC 3 cut(s) 37, 1430, 1462
BpmI CTGGAG 2 cut(s) 1417, 2157
Bpu14I TTCGAA 1 cut(s) 464
BpuMI CCSGG 3 cut(s) 61, 404, 1456
BsaI GGTCTC 1 cut(s) 222
BsaJI CCNNGG 9 cut(s) 105, 212, 297, 1454, 1470, 2117, 2560, 2575, 2639
BsaWI WCCGGW 3 cut(s) 40, 1675, 2512
BsaXI ACNNNNNCTCC 6 cut(s) 343, 373, 1218, 1248, 1317, 1347
Bsc4I CCNNNNNNNGG 5 cut(s) 53, 60, 302, 839, 1794
Bse118I RCCGGY 1 cut(s) 2512
Bse1I ACTGG 4 cut(s) 1788, 2229, 2432, 2621
Bse21I CCTNAGG 1 cut(s) 1423
Bse3DI GCAATG 3 cut(s) 1228, 1688, 1987
BseBI CCWGG 3 cut(s) 1263, 1471, 2136
BseDI CCNNGG 9 cut(s) 105, 212, 297, 1454, 1470, 2117, 2560, 2575, 2639
BseGI GGATG 8 cut(s) 22, 292, 502, 1090, 1186, 1346, 2005, 2454
BseLI CCNNNNNNNGG 5 cut(s) 53, 60, 302, 839, 1794
BseMI GCAATG 3 cut(s) 1228, 1688, 1987
BseMII CTCAG 7 cut(s) 111, 117, 233, 567, 1420, 1437, 1461
BseNI ACTGG 4 cut(s) 1788, 2229, 2432, 2621
BseRI GAGGAG 5 cut(s) 442, 1706, 2154, 2592, 2595
BseSI GKGCMC 1 cut(s) 1405
BseXI GCAGC 6 cut(s) 145, 824, 1404, 1670, 2131, 2573
BseYI CCCAGC 1 cut(s) 2050
Bsh1236I CGCG 2 cut(s) 107, 214
BshFI GGCC 5 cut(s) 295, 328, 1134, 1787, 2227
BshTI ACCGGT 1 cut(s) 2512
BsiHKAI GWGCWC 1 cut(s) 1405
BsiHKCI CYCGRG 1 cut(s) 33
BsiSI CCGG 7 cut(s) 41, 54, 61, 404, 1456, 1676, 2513
BslFI GGGAC 3 cut(s) 29, 947, 2444
BslI CCNNNNNNNGG 5 cut(s) 53, 60, 302, 839, 1794
BsmAI GTCTC 8 cut(s) 116, 222, 510, 735, 1450, 1716, 1869, 2301
BsmFI GGGAC 3 cut(s) 29, 947, 2444
BsmI GAATGC 1 cut(s) 934
BsnI GGCC 5 cut(s) 295, 328, 1134, 1787, 2227
Bso31I GGTCTC 1 cut(s) 222
BsoBI CYCGRG 1 cut(s) 33
Bsp119I TTCGAA 1 cut(s) 464
Bsp1286I GDGCHC 2 cut(s) 40, 1405
Bsp1407I TGTACA 2 cut(s) 1957, 2622
Bsp143I GATC 4 cut(s) 145, 829, 946, 1727
BspANI GGCC 5 cut(s) 295, 328, 1134, 1787, 2227
BspCNI CTCAG 7 cut(s) 112, 118, 232, 568, 1419, 1436, 1460
BspFNI CGCG 2 cut(s) 107, 214
BspLI GGNNCC 4 cut(s) 39, 45, 58, 2432
BspMAI CTGCAG 3 cut(s) 163, 1660, 2149
BspMI ACCTGC 1 cut(s) 293
BspOI GCTAGC 1 cut(s) 2246
BspPI GGATC 3 cut(s) 140, 824, 941
BspQI GCTCTTC 1 cut(s) 1155
BspT104I TTCGAA 1 cut(s) 464
BspTI CTTAAG 1 cut(s) 524
BspTNI GGTCTC 1 cut(s) 222
BsrDI GCAATG 3 cut(s) 1228, 1688, 1987
BsrFI RCCGGY 1 cut(s) 2512
BsrGI TGTACA 2 cut(s) 1957, 2622
BsrI ACTGG 4 cut(s) 1788, 2229, 2432, 2621
BssAI RCCGGY 1 cut(s) 2512
BssECI CCNNGG 9 cut(s) 105, 212, 297, 1454, 1470, 2117, 2560, 2575, 2639
BssMI GATC 4 cut(s) 145, 829, 946, 1727
BssT1I CCWWGG 3 cut(s) 297, 2117, 2639
Bst2UI CCWGG 3 cut(s) 1263, 1471, 2136
Bst4CI ACNGT 6 cut(s) 170, 188, 864, 1064, 1992, 2627
Bst6I CTCTTC 5 cut(s) 866, 1155, 1546, 1603, 2412
BstAFI CTTAAG 1 cut(s) 524
BstAUI TGTACA 2 cut(s) 1957, 2622
BstBI TTCGAA 1 cut(s) 464
BstC8I GCNNGC 3 cut(s) 1167, 2225, 2244
BstDEI CTNAG 9 cut(s) 120, 126, 219, 576, 893, 1406, 1423, 1447, 2311
BstDSI CCRYGG 3 cut(s) 105, 212, 2560
BstF5I GGATG 8 cut(s) 22, 292, 502, 1090, 1186, 1346, 2005, 2454
BstFNI CGCG 2 cut(s) 107, 214
BstH2I RGCGCY 1 cut(s) 79
BstHHI GCGC 1 cut(s) 78
BstKTI GATC 4 cut(s) 148, 832, 949, 1730
BstMAI GTCTC 8 cut(s) 116, 222, 510, 735, 1450, 1716, 1869, 2301
BstMBI GATC 4 cut(s) 145, 829, 946, 1727
BstMWI GCNNNNNNNGC 4 cut(s) 220, 256, 1094, 2285
BstNI CCWGG 3 cut(s) 1263, 1471, 2136
BstNSI RCATGY 1 cut(s) 1711
BstSCI CCNGG 6 cut(s) 59, 402, 1261, 1454, 1469, 2134
BstSFI CTRYAG 4 cut(s) 159, 630, 1656, 2145
BstSLI GKGCMC 1 cut(s) 1405
BstUI CGCG 2 cut(s) 107, 214
BstV1I GCAGC 6 cut(s) 145, 824, 1404, 1670, 2131, 2573
BstX2I RGATCY 2 cut(s) 145, 1727
BstXI CCANNNNNNTGG 1 cut(s) 745
BstYI RGATCY 2 cut(s) 145, 1727
Bsu36I CCTNAGG 1 cut(s) 1423
BsuRI GGCC 5 cut(s) 295, 328, 1134, 1787, 2227
BtgI CCRYGG 3 cut(s) 105, 212, 2560
BtsCI GGATG 8 cut(s) 22, 292, 502, 1090, 1186, 1346, 2005, 2454
BtsIMutI CAGTG 2 cut(s) 869, 2632
BveI ACCTGC 1 cut(s) 293
Cac8I GCNNGC 3 cut(s) 1167, 2225, 2244
CfoI GCGC 1 cut(s) 78
Cfr10I RCCGGY 1 cut(s) 2512
Cfr13I GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2226, 2431
Cfr42I CCGCGG 2 cut(s) 108, 215
Csp6I GTAC 5 cut(s) 1334, 1624, 1947, 1958, 2623
CspAI ACCGGT 1 cut(s) 2512
CviAII CATG 9 cut(s) 545, 881, 1075, 1364, 1432, 1708, 1744, 1961, 2076
CviQI GTAC 5 cut(s) 1334, 1624, 1947, 1958, 2623
DdeI CTNAG 9 cut(s) 120, 126, 219, 576, 893, 1406, 1423, 1447, 2311
DpnI GATC 4 cut(s) 147, 831, 948, 1729
DpnII GATC 4 cut(s) 145, 829, 946, 1727
DrdI GACNNNNNNGTC 1 cut(s) 214
DseDI GACNNNNNNGTC 1 cut(s) 214
EaeI YGGCCR 1 cut(s) 326
Eam1104I CTCTTC 5 cut(s) 866, 1155, 1546, 1603, 2412
EarI CTCTTC 5 cut(s) 866, 1155, 1546, 1603, 2412
EciI GGCGGA 1 cut(s) 2146
Eco130I CCWWGG 3 cut(s) 297, 2117, 2639
Eco24I GRGCYC 1 cut(s) 40
Eco31I GGTCTC 1 cut(s) 222
Eco47I GGWCC 5 cut(s) 43, 102, 136, 735, 2431
Eco57I CTGAAG 3 cut(s) 1484, 1512, 2360
Eco81I CCTNAGG 1 cut(s) 1423
Eco88I CYCGRG 1 cut(s) 33
EcoO109I RGGNCCY 1 cut(s) 136
EcoRII CCWGG 3 cut(s) 1261, 1469, 2134
EcoT14I CCWWGG 3 cut(s) 297, 2117, 2639
EcoT22I ATGCAT 1 cut(s) 796
EcoT38I GRGCYC 1 cut(s) 40
ErhI CCWWGG 3 cut(s) 297, 2117, 2639
FaeI CATG 9 cut(s) 548, 884, 1078, 1367, 1435, 1711, 1747, 1964, 2079
FalI AAGNNNNNCTT 2 cut(s) 2074, 2106
FaqI GGGAC 3 cut(s) 29, 947, 2444
FatI CATG 9 cut(s) 544, 880, 1074, 1363, 1431, 1707, 1743, 1960, 2075
FauI CCCGC 4 cut(s) 54, 219, 939, 2009
FauNDI CATATG 1 cut(s) 943
FblI GTMKAC 1 cut(s) 1505
FokI GGATG 8 cut(s) 29, 299, 509, 1097, 1193, 1333, 2012, 2441
FriOI GRGCYC 1 cut(s) 40
FspBI CTAG 9 cut(s) 27, 237, 273, 645, 816, 1005, 1725, 2243, 2267
GlaI GCGC 1 cut(s) 77
GsaI CCCAGC 1 cut(s) 2054
GsuI CTGGAG 2 cut(s) 1417, 2157
HaeII RGCGCY 1 cut(s) 79
HaeIII GGCC 5 cut(s) 295, 328, 1134, 1787, 2227
HapII CCGG 7 cut(s) 41, 54, 61, 404, 1456, 1676, 2513
HhaI GCGC 1 cut(s) 78
Hin1II CATG 9 cut(s) 548, 884, 1078, 1367, 1435, 1711, 1747, 1964, 2079
Hin6I GCGC 1 cut(s) 76
HinP1I GCGC 1 cut(s) 76
HincII GTYRAC 2 cut(s) 207, 1800
HindII GTYRAC 2 cut(s) 207, 1800
HpaII CCGG 7 cut(s) 41, 54, 61, 404, 1456, 1676, 2513
Hpy166II GTNNAC 8 cut(s) 207, 738, 905, 1403, 1506, 1781, 1800, 2264
Hpy188III TCNNGA 7 cut(s) 575, 998, 1005, 1309, 1425, 1643, 2548
Hpy8I GTNNAC 8 cut(s) 207, 738, 905, 1403, 1506, 1781, 1800, 2264
HpyCH4III ACNGT 6 cut(s) 170, 188, 864, 1064, 1992, 2627
HpyF10VI GCNNNNNNNGC 4 cut(s) 220, 256, 1094, 2285
HpyF3I CTNAG 9 cut(s) 120, 126, 219, 576, 893, 1406, 1423, 1447, 2311
Hsp92II CATG 9 cut(s) 548, 884, 1078, 1367, 1435, 1711, 1747, 1964, 2079
HspAI GCGC 1 cut(s) 76
KspI CCGCGG 2 cut(s) 108, 215
Kzo9I GATC 4 cut(s) 145, 829, 946, 1727
LguI GCTCTTC 1 cut(s) 1155
LmnI GCTCC 4 cut(s) 43, 62, 2141, 2533
Lsp1109I GCAGC 6 cut(s) 145, 824, 1404, 1670, 2131, 2573
LweI GCATC 8 cut(s) 7, 487, 781, 964, 1075, 1171, 1355, 2609
MaeI CTAG 9 cut(s) 27, 237, 273, 645, 816, 1005, 1725, 2243, 2267
MaeIII GTNAC 4 cut(s) 182, 1055, 1581, 2393
MalI GATC 4 cut(s) 147, 831, 948, 1729
MboI GATC 4 cut(s) 145, 829, 946, 1727
MfeI CAATTG 2 cut(s) 260, 553
MflI RGATCY 2 cut(s) 145, 1727
MhlI GDGCHC 2 cut(s) 40, 1405
MlsI TGGCCA 1 cut(s) 328
MluNI TGGCCA 1 cut(s) 328
MlyI GAGTC 3 cut(s) 190, 1250, 2066
MmeI TCCRAC 1 cut(s) 2555
Mox20I TGGCCA 1 cut(s) 328
Mph1103I ATGCAT 1 cut(s) 796
MroXI GAANNNNTTC 1 cut(s) 68
MscI TGGCCA 1 cut(s) 328
MseI TTAA 3 cut(s) 525, 2487, 2496
MslI CAYNNNNRTG 2 cut(s) 2035, 2549
Msp20I TGGCCA 1 cut(s) 328
MspA1I CMGCKG 4 cut(s) 107, 214, 1395, 2223
MspCI CTTAAG 1 cut(s) 524
MspI CCGG 7 cut(s) 41, 54, 61, 404, 1456, 1676, 2513
MspR9I CCNGG 6 cut(s) 61, 404, 1263, 1456, 1471, 2136
MunI CAATTG 2 cut(s) 260, 553
Mva1269I GAATGC 1 cut(s) 934
MvaI CCWGG 3 cut(s) 1263, 1471, 2136
MvnI CGCG 2 cut(s) 107, 214
MwoI GCNNNNNNNGC 4 cut(s) 220, 256, 1094, 2285
NciI CCSGG 3 cut(s) 61, 404, 1456
NdeI CATATG 1 cut(s) 943
NdeII GATC 4 cut(s) 145, 829, 946, 1727
NheI GCTAGC 1 cut(s) 2242
NlaIII CATG 9 cut(s) 548, 884, 1078, 1367, 1435, 1711, 1747, 1964, 2079
NlaIV GGNNCC 4 cut(s) 39, 45, 58, 2432
NmeAIII GCCGAG 1 cut(s) 59
NmuCI GTSAC 3 cut(s) 182, 1581, 2393
NsiI ATGCAT 1 cut(s) 796
NspI RCATGY 1 cut(s) 1711
NspV TTCGAA 1 cut(s) 464
PciI ACATGT 1 cut(s) 1707
PciSI GCTCTTC 1 cut(s) 1155
PctI GAATGC 1 cut(s) 934
PdmI GAANNNNTTC 1 cut(s) 68
PfoI TCCNGGA 2 cut(s) 59, 2134
PinAI ACCGGT 1 cut(s) 2512
PleI GAGTC 3 cut(s) 189, 1249, 2066
PpsI GAGTC 3 cut(s) 189, 1249, 2066
PpuMI RGGWCCY 1 cut(s) 136
PscI ACATGT 1 cut(s) 1707
Psp5II RGGWCCY 1 cut(s) 136
Psp6I CCWGG 3 cut(s) 1261, 1469, 2134
PspFI CCCAGC 1 cut(s) 2050
PspGI CCWGG 3 cut(s) 1261, 1469, 2134
PspN4I GGNNCC 4 cut(s) 39, 45, 58, 2432
PspPI GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2226, 2431
PspPPI RGGWCCY 1 cut(s) 136
PstI CTGCAG 3 cut(s) 163, 1660, 2149
PsuI RGATCY 2 cut(s) 145, 1727
PvuII CAGCTG 1 cut(s) 1395
RsaI GTAC 5 cut(s) 1335, 1625, 1948, 1959, 2624
RsaNI GTAC 5 cut(s) 1334, 1624, 1947, 1958, 2623
RseI CAYNNNNRTG 2 cut(s) 2035, 2549
SacII CCGCGG 2 cut(s) 108, 215
SapI GCTCTTC 1 cut(s) 1155
SaqAI TTAA 3 cut(s) 525, 2487, 2496
Sau3AI GATC 4 cut(s) 145, 829, 946, 1727
Sau96I GGNCC 8 cut(s) 43, 102, 136, 294, 735, 1133, 2226, 2431
ScaI AGTACT 2 cut(s) 1625, 1948
SchI GAGTC 3 cut(s) 190, 1250, 2066
ScrFI CCNGG 6 cut(s) 61, 404, 1263, 1456, 1471, 2136
SduI GDGCHC 2 cut(s) 40, 1405
SfaNI GCATC 8 cut(s) 7, 487, 781, 964, 1075, 1171, 1355, 2609
SfcI CTRYAG 4 cut(s) 159, 630, 1656, 2145
Sfr303I CCGCGG 2 cut(s) 108, 215
SfuI TTCGAA 1 cut(s) 464
SgrBI CCGCGG 2 cut(s) 108, 215
SinI GGWCC 5 cut(s) 43, 102, 136, 735, 2431
SmiMI CAYNNNNRTG 2 cut(s) 2035, 2549
SmlI CTYRAG 1 cut(s) 524
SmoI CTYRAG 1 cut(s) 524
SpeI ACTAGT 1 cut(s) 644
SspI AATATT 1 cut(s) 1291
SspMI CTAG 9 cut(s) 27, 237, 273, 645, 816, 1005, 1725, 2243, 2267
StyD4I CCNGG 6 cut(s) 59, 402, 1261, 1454, 1469, 2134
StyI CCWWGG 3 cut(s) 297, 2117, 2639
TaaI ACNGT 6 cut(s) 170, 188, 864, 1064, 1992, 2627
TaqI TCGA 4 cut(s) 98, 464, 1859, 1901
TaqII GACCGA 2 cut(s) 723, 1785
TatI WGTACW 4 cut(s) 1623, 1946, 1957, 2622
TauI GCSGC 4 cut(s) 110, 158, 253, 2223
Tru1I TTAA 3 cut(s) 525, 2487, 2496
Tru9I TTAA 3 cut(s) 525, 2487, 2496
TscAI CASTG 2 cut(s) 869, 2632
TseFI GTSAC 3 cut(s) 182, 1581, 2393
TseI GCWGC 6 cut(s) 158, 812, 1392, 1658, 2144, 2586
Tsp45I GTSAC 3 cut(s) 182, 1581, 2393
TspGWI ACGGA 1 cut(s) 192
TspRI CASTG 2 cut(s) 869, 2632
Vha464I CTTAAG 1 cut(s) 524
VneI GTGCAC 1 cut(s) 1401
VpaK11BI GGWCC 5 cut(s) 43, 102, 136, 735, 2431
XapI RAATTY 3 cut(s) 1302, 1905, 2519
XbaI TCTAGA 1 cut(s) 1004
XceI RCATGY 1 cut(s) 1711
XmiI GTMKAC 1 cut(s) 1505
XmnI GAANNNNTTC 1 cut(s) 68
XspI CTAG 9 cut(s) 27, 237, 273, 645, 816, 1005, 1725, 2243, 2267
ZrmI AGTACT 2 cut(s) 1625, 1948
Zsp2I ATGCAT 1 cut(s) 796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.