Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0007863

Physical Location & Seq

Genomic Coordinates Reverse (-)

18991102 .. 19006420

Gene Structure 15319 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g24630.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5514 bp

ATGTCCTCCACCGCCGTCCGCCACCTCACCGTCCTCGGCGAGTTCAAGCCCTTCGGCCTAATCGCCGAAGCTCTCGACGGCAAGCCCGCCGATGACGTCCCGGACAAGTACGACTACTTCCTCTTCGACCCCGACACCGTCCGAGATCGCGACGAGACCGACGACCATGACGTCCTCAGCTCCGCCTTCAGCGACCGCTGCGATCACGAGCTCTTCATTCGCGGCAATCGGATAATATGGTCAACAGGTCCACGAGTCTGCAAGAGGTTCACCTTGCCTTCTCCAGTCATCAAGGCTTGCTGGTGTCGTCTGGGAGATATGACCAAAGCTTGTCTCTGTGTATTGCAAACGGCTTGTTTAACAATCTGCAACACATCGGGGGAAGTAGTATCAATACCTGTGTCGGAAGCTATTACATCGATATGGCCTCTACCGTTTGGTTTACTACTCCAGCAAGCAGCTCAACCGAGTTCAACTACATATGTTCCTTCGTTGTCTTCGAGTCCTTTGTTCGGTGAAAGTCCTTCTATGTCTTCTGTAAGACGAGGAGTGTTACATAATAGAAAAGAAGCTGGAGTTAGTCCGCAGCATAATTTCAGTTTTGCGAGTGGAATTGACCATGCGGTGAAGGAAGAAACAAGTTCAATGTCATCGCATCTGATTCTGCAAGATCCATTGGAAGAACTGCAATTGGCTTATATTGAAGAAAGAGGAAAGTTGAACATAATGAAGGAATTTGACGAGAATACTATCTGGACGAGTGATCGGGTTCCCCTTATGGCATCATATAATACAGGAAAGATGCAACACTCTGTGTGGGTTGCGGAAACCAACAATCTTAACCTTGACCTGGCAAGTGCTAACTTAGTAGATGCAGTTCCTAATGGTATTATAGCAAAACACTGCTCGTTTCGTAGAATATGGCAAGGGAAGGGTGCAAAGACAGCAGCTAGCAAGGTTTTCCTCGCTACTGATGACGATGCAGCTCCTATCATTTGTTTCCTTCACCAAGAACAAAAAAAGTTGCTGTCTTTAAGGCTTCAAAGTGTTGAAATAAATAATGAGCTTCTCTTTGACATAAAACCTGACATGAGCTGGAGTATACCTGCAGTAGCAGCCGTACCTGTAATTGTTACACGCCCTAGAGCAACAGTAGGACTGCTGCCATATTCGGACATGCTCATTTTGGCACCTGAAAATGCTATTCTTCTCTATTCAGGGAAGCAATGCCTGTGTAGGTATATGTTGCCTTCTTCTTTGAGTAAAGACCGGTTTTCACATAGTATGGAGTTTCCAGAAACATCTGTTTCCCAGGGTCTGAAGATTGTGGGATTGACTGACGCTGTTGAGGGGCGTATCAATGTTACAGTGAATAATGGGCAGATATATCGGTGTGTATTACGAAGAAGCCCTACATCTTCTCTGGCAAATGACTGCATCACAGCTATGGCTGAGGGACTCAGTTCCAGCTTCTACAGCCATTTTCTTAGTCTTCTATGGAAAGATGGTGACTCTGCTTATTTATCAGAGGCTGATTCTAGTGTTCATTCAGAATGGGATTCTTTTCGCAGCATTATCATGGAAATGTGTCAATCAACTGCCACTTCTAAAATGGTCTCAAACCCAGTACCTCAGTCATCGTGGGAGTTTCTTATTAGCAGTAAATTTCACGATAATTTTTGCAAAAATAACTTCATTGCCCAAAATTCTTCTGTAATGTCATTGGATGTACGAAGACTGGACGCCTCTCAGTTAAGTACAAATAGTAACCAAAGGATAGAGAAGACCTTTCACTCTGAGCTCTTGATGGAGAGTTTACATTGTTTGCATGCAGTTTATGAAAGCCTGAAACTGAATAATCTTCGCAAACGGGACTTGGAGCTCCTGGGATCTCTGTTATGCTATATTGCTAAGTTTCTGGGTGAGGAAGGCTATGTTGACCATTACATTCGTGACTTTCCTGGCCTTTCCAGAAGCGTTGGGATATGTGAAATATCATTTTCAAAGAAATCACCTCCAAGTTTATTCAGATGGCTTGAAAACTGTTTGCTATATGGACACGATTCAGCTAATACCAATGATCTTCCACCTTTGATTTGTGAAGAGGGAAAGTCTGTTGTGAACTGGGCTCGGAAGATAGCATTATTCTATAGTTTGTTAACCGGTGCCAAACAAATAGGGAAGAAACTCTCTTCTGGTATTTACTGTAATATTGCCACAGGTTCATACTGCACAAATGAGGAACTCACAGTTCTAGCAATGGTTGGGGAAAAATTTGGACTGCAACAGCTTGACTCACTGCCTTCTGGCATGTCTCTTCCTTTGAGACACGCATTGGCTAAGTGCCGGGAATCTCCTCCTACTGGTTGGCCTGCAGCTGCGTATGTTCTTCTTGGCCGTGAAGATTTGGCTTTGTCATGTCTGGCACAAACATGCAATTCCAAAGATCTTGAAACCGAAACTAATGTGAATTTCATCTCTATGTCTGCACCTTACATGCTACATCTGCACCCAGTGACAATTCCTTCTGCAGTTTCTGATACAAATGGATTGGACAATACTAAGTTTGAGGACACAGATTCGATTGATGGGTCTACAACCGATGGTATGGAGCATATCTTCAACTCAAGCACACAGTTGCGGTATGGTCGTGATTTGCGACTGAATGAGGTTAGACGGCTCCTTTGCTCCGCAAGACCCGTGGCAATTCAAACATCTGTTAATCCTAGCGCCTCTGATCAGGACCTCCAACAGGCCCAGCTATGGCACCTTGCACAAAGGACTACTGCCCTTCCTCTTGGCCGTGGAGCATTCACCCTTGCAACCATATACACACTTCTGACAGAGGCCTTTGTAGTCCCGAAGATTGTATTAGCAGGTCGATTGCCAGCACAACAAAATGCCACTGTTAATCTGGACCCAAATGTGAGGAATGTAGAAGAAATTAAAACTTGGCCTGAATTCCACAATGCTGTTGCTGCTGGACTCAGGCTGGCTCCTCTTCAGGGAAAGATGTCAAAGACGTGGATCAAATATAATAAACCAGAGGAGCCAAATGCTATTCATGCTGGACTTCTCTTTGCTCTAGGATTACATGGTTACCTACGTGTTTTGAATATTACTGATATATTTCAGTATTTTCGACAGGAACATGACATCACAAGTCTAGGACTAATGCTTGGCCTGGCAGCTACCTATAGAGGAACTATGCAACCAGAAATATCTAAGTGTCTTTTTGTTCATATTCCTGCTCGGTATCCATCTTCATTTCCAGAATTGGAGTTACCGACGCTTCTGCAGTCAGCAGCTCTAATGTCAGTCGGGCTTCTTTATGAAGGATCAGCACACGCACAAACAATGCAGATTCTCTTGGGGGAAATAGGACGTAGAACTGCAGGTGATAATGTACTAGAAAGGGAAGGTTATGCTGTTTCTGCAGGATTTTCCCTGGGTCTTCTTGCATTGGGTCGGGGAGAAGATGCTCTTGGTTTCATGGAGACTTTGGTTGACAAATTGTTCCATTATATTGGTGGAAAAGAAGGTCGTAATCAGGATAGATCCATTTCATCAACACTATCAGTAGATGACAATCGTGCTGCTGCGCAGATGATGGAAGGGACTGCGGTGAATGTTGATGTCACTGCACCTGGAGCAACGATTGCTCTTGCTTTGATGTTTTTAAGGACTGAATCTCAGGCAATTGTGTCTAAGCTCTCAATTCCTCGTACACAATTTGAGCTCCAATATGTGAGGCCTGATTTCATCATGCTTCGTGTGATTGCTCGAAATTTGATAATGTGGAGCAGGATTCATCCTTCCCAAGATTGGGTACAGTCTCAGATTCCGGATATTATCAAAAATGGTGTCAAATTCCTTGGGGATGATACTAATGATATTGATGAAATGGATGCTGAATCATTTGTTCAGGCATATGTCAATATTGTGGCTGGAGCCTGCATTTCTCTTGGGTTGAGATTCGCTGGTACAAAGGATGGACACGCACAGGAGTTACTTTACAACTATGCTGTTTACTTCTTAAACGAGATCAAGCCTGTTTCTGCTACAAGTGGAAACTTGCCGAAGGGATTGTCTCGCTATGTGGATAGGGGGACTCTGGAAATATGCTTGCATCTCATTGTTCTTTCCTTGTGTGTGGTTATGGCTGGTTCTGGGCATCTACAAACGTTTAAGCTATTGAGGTTTCTCCGCAGCAGAAATTCTGCTGATGGGCAAGTTAACTATGGTGTTCAGATGGCTGTAAGCCTAGCAATCGGTTTCTTGTTCCTTGGTGGAGGAATGCAGACATTTTCAACAAGCAACAGTTCAGTTGCCGCTTTGCTAATCACTCTCTATCCACGCTTGCCAACTGGACCAAATGATAATAGATGCCACTTCCAGGCATTTCGACATTTTTACGTACTTGCAACAGAAGCTCGCTGGATCCAGACTGTTGACGTTGACACTGGTTTACCAGTGTATGCCCCGCTTGAAGTTACTGTTAGGGAAACCGAGCACTATGCAGAAACAAGTTTTTGTGAGGTTACACCGTGCCTTCTGCCAGAACGTGCCATTTTGAAGACGCTACGTATTTGTGGTCCTCGGTATTGGCCTCAAGTCATAGATCTTGTCCCTGAAGATAAACCTTGGTGGACATCTGGGGACAAGAGTAGCCCATTTAATTCTGGTGTTTTGTATATCAAGAGAAAGGTTGGAGCTTGTTCTTATATTGATGATCCAGTAGGGTGTCAGTCATTGCTGTCACGTGCAATGCATAAGGTGTTTGGTTTGACAACTTTAAAAGGGCCTAGCCCATCCTCCAGTGGCCAAAATGGACCTGGTTCAGTTACAGTTGATCAGTTGGTTGGTACTTTCTCCTCCGATCCTAGCTTAATTGCATTTGCACAACTCTGCTGTGACCCTTCCTGGAAGAGCAGATCTGACATTGACTTCCAGGAATTTTGCTTGCAAGTGTTATTTGAGTGTGTGAGCAAGGACAGGCCTGCTCTTTTACAGGTCTACTTGTCACTATACACGACAATGGGGTCAATGGCAGGTCAAGTAACTAGTGATACTGTTGTTTTATGCGACTCCTTGTCCGTCTCCAATCTTAAGCTTGCACTAGCGTACAATGAGGCTTTGTTGAGTGGAAGATTGACCTCTTCGAGAGGTGGCATTGTTCAATCCAACTTTATAGCATGTCTTCGGAAGCAAGTGGAAGCACTGCTGGATTGTTCTCAGGACTTGAAGGATGATTTCTGTAATTATATGTATTCAGGGAAGTGGCCAAATGTGGAAGAATCCCAGGGAAATAAACGTTCAATACTTCTTTCTTGGTACCTTCAGTGGTTTTGTGTACCATCACCATCTGCAGTTAAGACAGCTGTGGACAAAGTCATGCCCAAGCTCAAGTCATCCTCATCTTTGGTCCCTTTTCTGCGGTTATTATTTCCAAAAGCTCATGTCAATGCTATTACTGAGATAGATAAGCTCTTTTCATCCACTGACGGTAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0007275 GO:0008150 GO:0009553 GO:0009790 GO:0009791 GO:0009793 GO:0009908 GO:0010154 GO:0010252 GO:0022414 GO:0032501 GO:0032502 GO:0035670 GO:0042592 GO:0048229 GO:0048316 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048878 GO:0061458 GO:0065007 GO:0065008 GO:0090567 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC1 PC_rep

Protein Analysis

1838

Amino Acids

202.86

Weight (kDa)

6.03

Isoelectric Point (pI)

47.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANAPC1	PF12859	11 - 101	6.4e-06	Anaphase-promoting complex subunit 1 WD40 beta-propeller domain
ANAPC1	PF12859	137 - 349	3.1e-31	Anaphase-promoting complex subunit 1 WD40 beta-propeller domain
Apc1_MidN	PF20518	369 - 628	3.5e-21	Anaphase-promoting complex subunit 1 middle domain
APC1_3rd	PF21282	1303 - 1366	1.5e-15	APC1 beta sandwich domain
APC1_C	PF18122	1443 - 1610	4.7e-33	Anaphase-promoting complex sub unit 1 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007863)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05560 AT5G05560 AT5G05560
fragaria_vesca	FvH4_7g24630 FvH4_7g24630 FvH4_7g24630 FvH4_7g24630 FvH4_7g24630 FvH4_7g24630
malus_domestica	MD07G1223400.v1.1
prunus_persica	Prupe.2G252000_v2.0.a1 Prupe.2G252000_v2.0.a1
pyrus_communis	pycom01g17190 pycom07g20210
rosa_chinensis	RchiOBHm_Chr1g0370461
rosa_laevigata	RLG00000027039
rosa_multiflora	Rmu_sc0005656.1_g000015
rosa_roxburghii	Rroxscaffold_4G00286540
rosa_rugosa	Rorug01G0356900
rosa_samantha	Rh1AG365400 Rh1BG328400 Rh1CG341500 Rh1DG358700
rosa_wichuraiana	Rw1G032210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3386
AasI	GACNNNNNNGTC	2 cut(s)	170, 5041
AatII	GACGTC	2 cut(s)	99, 174
Acc16I	TGCGCA	1 cut(s)	3603
Acc36I	ACCTGC	4 cut(s)	1114, 2867, 3386, 5042
Acc65I	GGTACC	1 cut(s)	5334
AccB1I	GGYRCC	4 cut(s)	1189, 2165, 2766, 5334
AccI	GTMKAC	3 cut(s)	1102, 2594, 5016
AccII	CGCG	2 cut(s)	150, 222
AccIII	TCCGGA	1 cut(s)	3844
AclI	AACGTT	2 cut(s)	4184, 5314
AclWI	GGATC	9 cut(s)	665, 1897, 3035, 3346, 3552, 4435, 4448, 4727, 4874
AcoI	YGGCCR	4 cut(s)	2395, 2800, 4822, 5282
AcuI	CTGAAG	5 cut(s)	172, 1340, 2987, 4653, 5324
AcvI	CACGTG	1 cut(s)	4763
AcyI	GRCGYC	3 cut(s)	96, 171, 1743
AdeI	CACNNNGTG	2 cut(s)	814, 2515
AfiI	CCNNNNNNNGG	9 cut(s)	512, 850, 2363, 2752, 2763, 3005, 3825, 3826, 4396
AflII	CTTAAG	1 cut(s)	5108
AflIII	ACRYGT	1 cut(s)	3106
AgeI	ACCGGT	2 cut(s)	1269, 2162
AhdI	GACNNNNNGTC	1 cut(s)	5092
AhlI	ACTAGT	1 cut(s)	5063
AjiI	CACGTC	1 cut(s)	3024
AjuI	GAANNNNNNNTTGG	2 cut(s)	3468, 3500
Alw21I	GWGCWC	5 cut(s)	213, 1803, 1884, 3741, 4515
Alw26I	GTCTC	9 cut(s)	149, 338, 1621, 2319, 2320, 3491, 3840, 4095, 5104
AlwI	GGATC	9 cut(s)	665, 1897, 3035, 3346, 3552, 4435, 4448, 4727, 4874
AlwNI	CAGNNNCTG	3 cut(s)	1318, 1532, 2537
Aor13HI	TCCGGA	1 cut(s)	3844
ArsI	GACNNNNNNTTYG	6 cut(s)	2667, 2699, 3849, 3881, 4073, 4105
AsiGI	ACCGGT	2 cut(s)	1269, 2162
Asp718I	GGTACC	1 cut(s)	5334
AspLEI	GCGC	2 cut(s)	2732, 3604
AspS9I	GGNCC	9 cut(s)	248, 2743, 2755, 2917, 4370, 4595, 4802, 4832, 5425
AsuC2I	CCSGG	2 cut(s)	101, 2348
AsuNHI	GCTAGC	1 cut(s)	950
AvaII	GGWCC	7 cut(s)	248, 2743, 2917, 4370, 4595, 4832, 5425
BaeI	ACNNNNGTAYC	2 cut(s)	5061, 5094
BalI	TGGCCA	2 cut(s)	4824, 5284
BamHI	GGATCC	1 cut(s)	4440
BanI	GGYRCC	4 cut(s)	1189, 2165, 2766, 5334
BanII	GRGCYC	5 cut(s)	213, 1803, 1884, 2131, 3741
BarI	GAAGNNNNNNTAC	4 cut(s)	101, 133, 1396, 1428
BauI	CACGAG	2 cut(s)	206, 252
BbrPI	CACGTG	1 cut(s)	4763
BbsI	GAAGAC	8 cut(s)	489, 525, 1484, 1741, 1790, 3446, 4583, 5192
Bbv12I	GWGCWC	5 cut(s)	213, 1803, 1884, 3741, 4515
BbvCI	CCTCAGC	2 cut(s)	176, 1452
BceAI	ACGGC	6 cut(s)	94, 366, 1103, 2382, 2693, 2787
BcgI	CGANNNNNNTGC	6 cut(s)	1370, 1404, 3277, 3311, 4499, 4533
BciVI	GTATCC	1 cut(s)	3267
BclI	TGATCA	2 cut(s)	2737, 4852
BcnI	CCSGG	2 cut(s)	101, 2348
BcoDI	GTCTC	9 cut(s)	149, 338, 1621, 2319, 2320, 3491, 3840, 4095, 5104
BcuI	ACTAGT	1 cut(s)	5063
BfoI	RGCGCY	1 cut(s)	2733
BfrI	CTTAAG	1 cut(s)	5108
BfuAI	ACCTGC	4 cut(s)	1114, 2867, 3386, 5042
BfuI	GTATCC	1 cut(s)	3267
BglII	AGATCT	3 cut(s)	2446, 4621, 4934
Bme18I	GGWCC	7 cut(s)	248, 2743, 2917, 4370, 4595, 4832, 5425
BmeRI	GACNNNNNGTC	1 cut(s)	5092
BmgBI	CACGTC	1 cut(s)	3024
BmgT120I	GGNCC	9 cut(s)	248, 2743, 2755, 2917, 4370, 4595, 4802, 4832, 5425
BmrI	ACTGGG	3 cut(s)	1619, 2134, 2507
BmtI	GCTAGC	1 cut(s)	954
BmuI	ACTGGG	3 cut(s)	1619, 2134, 2507
BpiI	GAAGAC	8 cut(s)	489, 525, 1484, 1741, 1790, 3446, 4583, 5192
BpmI	CTGGAG	7 cut(s)	267, 434, 594, 1117, 3669, 3969, 4801
Bpu10I	CCTNAGC	2 cut(s)	176, 1452
BpuEI	CTTGAG	3 cut(s)	2611, 4596, 5390
BpuMI	CCSGG	2 cut(s)	101, 2348
Bsa29I	ATCGAT	1 cut(s)	419
BsaAI	YACGTR	4 cut(s)	3107, 4417, 4586, 4763
BsaBI	GATNNNNATC	1 cut(s)	3588
BsaHI	GRCGYC	3 cut(s)	96, 171, 1743
BsaI	GGTCTC	2 cut(s)	149, 1621
BsaWI	WCCGGW	3 cut(s)	1269, 2162, 3844
Bsc4I	CCNNNNNNNGG	9 cut(s)	512, 850, 2363, 2752, 2763, 3005, 3825, 3826, 4396
Bse118I	RCCGGY	2 cut(s)	1269, 2162
Bse3DI	GCAATG	5 cut(s)	1232, 1695, 2265, 4751, 4773
Bse8I	GATNNNNATC	1 cut(s)	3588
BseAI	TCCGGA	1 cut(s)	3844
BseCI	ATCGAT	1 cut(s)	419
BseGI	GGATG	9 cut(s)	1732, 3811, 3886, 3913, 3997, 4811, 5254, 5411, 5495
BseJI	GATNNNNATC	1 cut(s)	3588
BseLI	CCNNNNNNNGG	9 cut(s)	512, 850, 2363, 2752, 2763, 3005, 3825, 3826, 4396
BseMI	GCAATG	5 cut(s)	1232, 1695, 2265, 4751, 4773
BseRI	GAGGAG	5 cut(s)	561, 2346, 2988, 3062, 4864
BseYI	CCCAGC	1 cut(s)	2757
BsgI	GTGCAG	4 cut(s)	2215, 2472, 2492, 3627
Bsh1236I	CGCG	2 cut(s)	150, 222
Bsh1285I	CGRYCG	1 cut(s)	196
BshNI	GGYRCC	4 cut(s)	1189, 2165, 2766, 5334
BshTI	ACCGGT	2 cut(s)	1269, 2162
BshVI	ATCGAT	1 cut(s)	419
BsiEI	CGRYCG	1 cut(s)	196
BsiHKAI	GWGCWC	5 cut(s)	213, 1803, 1884, 3741, 4515
BsiSI	CCGG	5 cut(s)	101, 1270, 2163, 2347, 3845
BslFI	GGGAC	9 cut(s)	83, 1470, 1886, 2843, 3631, 4123, 4613, 4673, 5411
BslI	CCNNNNNNNGG	9 cut(s)	512, 850, 2363, 2752, 2763, 3005, 3825, 3826, 4396
BsmAI	GTCTC	9 cut(s)	149, 338, 1621, 2319, 2320, 3491, 3840, 4095, 5104
BsmBI	CGTCTC	1 cut(s)	5104
BsmFI	GGGAC	9 cut(s)	83, 1470, 1886, 2843, 3631, 4123, 4613, 4673, 5411
BsmI	GAATGC	2 cut(s)	2810, 4302
Bso31I	GGTCTC	2 cut(s)	149, 1621
Bsp1286I	GDGCHC	6 cut(s)	213, 1803, 1884, 2131, 3741, 4515
Bsp13I	TCCGGA	1 cut(s)	3844
Bsp68I	TCGCGA	1 cut(s)	150
BspDI	ATCGAT	1 cut(s)	419
BspEI	TCCGGA	1 cut(s)	3844
BspFNI	CGCG	2 cut(s)	150, 222
BspMAI	CTGCAG	7 cut(s)	1111, 2377, 2533, 3300, 3397, 3439, 5371
BspMI	ACCTGC	4 cut(s)	1114, 2867, 3386, 5042
BspOI	GCTAGC	1 cut(s)	954
BspPI	GGATC	9 cut(s)	665, 1897, 3035, 3346, 3552, 4435, 4448, 4727, 4874
BspQI	GCTCTTC	2 cut(s)	218, 4922
BspT107I	GGYRCC	4 cut(s)	1189, 2165, 2766, 5334
BspTI	CTTAAG	1 cut(s)	5108
BspTNI	GGTCTC	2 cut(s)	149, 1621
BsrDI	GCAATG	5 cut(s)	1232, 1695, 2265, 4751, 4773
BsrFI	RCCGGY	2 cut(s)	1269, 2162
BssAI	RCCGGY	2 cut(s)	1269, 2162
BssNAI	GTATAC	1 cut(s)	1103
BssNI	GRCGYC	3 cut(s)	96, 171, 1743
BssSI	CACGAG	2 cut(s)	206, 252
BssT1I	CCWWGG	3 cut(s)	3874, 4285, 4643
Bst1107I	GTATAC	1 cut(s)	1103
Bst2BI	CACGAG	2 cut(s)	206, 252
Bst6I	CTCTTC	8 cut(s)	128, 218, 2097, 2197, 2322, 3006, 4922, 5164
BstACI	GRCGYC	3 cut(s)	96, 171, 1743
BstAFI	CTTAAG	1 cut(s)	5108
BstAPI	GCANNNNNTGC	1 cut(s)	3659
BstBAI	YACGTR	4 cut(s)	3107, 4417, 4586, 4763
BstDSI	CCRYGG	2 cut(s)	2700, 2803
BstEII	GGTNACC	1 cut(s)	3098
BstENI	CCTNNNNNAGG	1 cut(s)	2750
BstF5I	GGATG	9 cut(s)	1732, 3811, 3886, 3913, 3997, 4811, 5254, 5411, 5495
BstFNI	CGCG	2 cut(s)	150, 222
BstH2I	RGCGCY	1 cut(s)	2733
BstHHI	GCGC	2 cut(s)	2732, 3604
BstMAI	GTCTC	9 cut(s)	149, 338, 1621, 2319, 2320, 3491, 3840, 4095, 5104
BstMCI	CGRYCG	1 cut(s)	196
BstNSI	RCATGY	6 cut(s)	1180, 1832, 2314, 2436, 2500, 5199
BstPI	GGTNACC	1 cut(s)	3098
BstSNI	TACGTA	2 cut(s)	4417, 4586
BstUI	CGCG	2 cut(s)	150, 222
BstV2I	GAAGAC	8 cut(s)	489, 525, 1484, 1741, 1790, 3446, 4583, 5192
BstX2I	RGATCY	7 cut(s)	670, 1889, 2446, 3557, 4440, 4621, 4934
BstXI	CCANNNNNNTGG	1 cut(s)	3527
BstYI	RGATCY	7 cut(s)	670, 1889, 2446, 3557, 4440, 4621, 4934
BstZ17I	GTATAC	1 cut(s)	1103
Bsu15I	ATCGAT	1 cut(s)	419
BsuI	GTATCC	1 cut(s)	3267
BsuTUI	ATCGAT	1 cut(s)	419
BtgI	CCRYGG	2 cut(s)	2700, 2803
BtgZI	GCGATG	1 cut(s)	636
BtrI	CACGTC	1 cut(s)	3024
BtsCI	GGATG	9 cut(s)	1732, 3811, 3886, 3913, 3997, 4811, 5254, 5411, 5495
BtsI	GCAGTG	4 cut(s)	901, 2297, 3639, 5219
BtuMI	TCGCGA	1 cut(s)	150
BveI	ACCTGC	4 cut(s)	1114, 2867, 3386, 5042
CaiI	CAGNNNCTG	3 cut(s)	1318, 1532, 2537
CfoI	GCGC	2 cut(s)	2732, 3604
Cfr10I	RCCGGY	2 cut(s)	1269, 2162
Cfr13I	GGNCC	9 cut(s)	248, 2743, 2755, 2917, 4370, 4595, 4802, 4832, 5425
ClaI	ATCGAT	1 cut(s)	419
CseI	GACGC	4 cut(s)	1349, 1751, 3298, 4588
CsiI	ACCWGGT	1 cut(s)	4834
CspAI	ACCGGT	2 cut(s)	1269, 2162
CspCI	CAANNNNNGTGG	2 cut(s)	2682, 2717
DraI	TTTAAA	1 cut(s)	4797
DraIII	CACNNNGTG	2 cut(s)	814, 2515
DrdI	GACNNNNNNGTC	2 cut(s)	170, 5041
DriI	GACNNNNNGTC	1 cut(s)	5092
DseDI	GACNNNNNNGTC	2 cut(s)	170, 5041
EaeI	YGGCCR	4 cut(s)	2395, 2800, 4822, 5282
Eam1104I	CTCTTC	8 cut(s)	128, 218, 2097, 2197, 2322, 3006, 4922, 5164
Eam1105I	GACNNNNNGTC	1 cut(s)	5092
EarI	CTCTTC	8 cut(s)	128, 218, 2097, 2197, 2322, 3006, 4922, 5164
EciI	GGCGGA	2 cut(s)	8, 172
Ecl136II	GAGCTC	4 cut(s)	211, 1801, 1882, 3739
Eco105I	TACGTA	2 cut(s)	4417, 4586
Eco130I	CCWWGG	3 cut(s)	3874, 4285, 4643
Eco147I	AGGCCT	3 cut(s)	2849, 3754, 4999
Eco24I	GRGCYC	5 cut(s)	213, 1803, 1884, 2131, 3741
Eco31I	GGTCTC	2 cut(s)	149, 1621
Eco47I	GGWCC	7 cut(s)	248, 2743, 2917, 4370, 4595, 4832, 5425
Eco53kI	GAGCTC	4 cut(s)	211, 1801, 1882, 3739
Eco57I	CTGAAG	5 cut(s)	172, 1340, 2987, 4653, 5324
Eco72I	CACGTG	1 cut(s)	4763
Eco91I	GGTNACC	1 cut(s)	3098
EcoICRI	GAGCTC	4 cut(s)	211, 1801, 1882, 3739
EcoNI	CCTNNNNNAGG	1 cut(s)	2750
EcoO109I	RGGNCCY	2 cut(s)	2743, 4802
EcoO65I	GGTNACC	1 cut(s)	3098
EcoRI	GAATTC	1 cut(s)	2960
EcoT14I	CCWWGG	3 cut(s)	3874, 4285, 4643
EcoT22I	ATGCAT	1 cut(s)	4773
EcoT38I	GRGCYC	5 cut(s)	213, 1803, 1884, 2131, 3741
ErhI	CCWWGG	3 cut(s)	3874, 4285, 4643
Esp3I	CGTCTC	1 cut(s)	5104
FalI	AAGNNNNNCTT	2 cut(s)	3468, 3500
FaqI	GGGAC	9 cut(s)	83, 1470, 1886, 2843, 3631, 4123, 4613, 4673, 5411
FauI	CCCGC	2 cut(s)	94, 4491
FauNDI	CATATG	2 cut(s)	481, 3931
FbaI	TGATCA	2 cut(s)	2737, 4852
FblI	GTMKAC	3 cut(s)	1102, 2594, 5016
FokI	GGATG	9 cut(s)	1739, 3798, 3893, 3920, 4004, 4798, 5261, 5398, 5482
FriOI	GRGCYC	5 cut(s)	213, 1803, 1884, 2131, 3741
FspI	TGCGCA	1 cut(s)	3603
GlaI	GCGC	2 cut(s)	2731, 3603
GsaI	CCCAGC	1 cut(s)	2761
GsuI	CTGGAG	7 cut(s)	267, 434, 594, 1117, 3669, 3969, 4801
HaeII	RGCGCY	1 cut(s)	2733
HapII	CCGG	5 cut(s)	101, 1270, 2163, 2347, 3845
HgaI	GACGC	4 cut(s)	1349, 1751, 3298, 4588
HhaI	GCGC	2 cut(s)	2732, 3604
Hin1I	GRCGYC	3 cut(s)	96, 171, 1743
Hin6I	GCGC	2 cut(s)	2730, 3602
HinP1I	GCGC	2 cut(s)	2730, 3602
HincII	GTYRAC	7 cut(s)	243, 1939, 2160, 3508, 4237, 4453, 4459
HindII	GTYRAC	7 cut(s)	243, 1939, 2160, 3508, 4237, 4453, 4459
HindIII	AAGCTT	2 cut(s)	327, 5111
HpaI	GTTAAC	2 cut(s)	2160, 4237
HpaII	CCGG	5 cut(s)	101, 1270, 2163, 2347, 3845
Hpy99I	CGWCG	4 cut(s)	80, 155, 164, 3292
Hsp92I	GRCGYC	3 cut(s)	96, 171, 1743
HspAI	GCGC	2 cut(s)	2730, 3602
Kpn2I	TCCGGA	1 cut(s)	3844
KpnI	GGTACC	1 cut(s)	5338
Ksp22I	TGATCA	2 cut(s)	2737, 4852
KspAI	GTTAAC	2 cut(s)	2160, 4237
LguI	GCTCTTC	2 cut(s)	218, 4922
MabI	ACCWGGT	1 cut(s)	4834
MfeI	CAATTG	2 cut(s)	689, 3699
MflI	RGATCY	7 cut(s)	670, 1889, 2446, 3557, 4440, 4621, 4934
MhlI	GDGCHC	6 cut(s)	213, 1803, 1884, 2131, 3741, 4515
MlsI	TGGCCA	2 cut(s)	4824, 5284
MluNI	TGGCCA	2 cut(s)	4824, 5284
MlyI	GAGTC	8 cut(s)	264, 511, 1452, 1505, 2288, 2979, 4105, 5081
MmeI	TCCRAC	4 cut(s)	384, 2773, 4690, 5208
Mox20I	TGGCCA	2 cut(s)	4824, 5284
Mph1103I	ATGCAT	1 cut(s)	4773
MroI	TCCGGA	1 cut(s)	3844
MscI	TGGCCA	2 cut(s)	4824, 5284
MslI	CAYNNNNRTG	8 cut(s)	421, 1445, 1577, 1583, 2431, 2480, 5036, 5463
Msp20I	TGGCCA	2 cut(s)	4824, 5284
MspA1I	CMGCKG	3 cut(s)	198, 2378, 5381
MspCI	CTTAAG	1 cut(s)	5108
MspI	CCGG	5 cut(s)	101, 1270, 2163, 2347, 3845
MunI	CAATTG	2 cut(s)	689, 3699
Mva1269I	GAATGC	2 cut(s)	2810, 4302
MvnI	CGCG	2 cut(s)	150, 222
NciI	CCSGG	2 cut(s)	101, 2348
NdeI	CATATG	2 cut(s)	481, 3931
NheI	GCTAGC	1 cut(s)	950
NmeAIII	GCCGAG	1 cut(s)	15
NmuCI	GTSAC	7 cut(s)	1508, 1952, 2515, 3637, 4758, 4913, 5022
NruI	TCGCGA	1 cut(s)	150
NsbI	TGCGCA	1 cut(s)	3603
NsiI	ATGCAT	1 cut(s)	4773
NspI	RCATGY	6 cut(s)	1180, 1832, 2314, 2436, 2500, 5199
PaeI	GCATGC	1 cut(s)	1832
PaqCI	CACCTGC	1 cut(s)	3386
PasI	CCCWGGG	3 cut(s)	1312, 3448, 5302
PceI	AGGCCT	3 cut(s)	2849, 3754, 4999
PciSI	GCTCTTC	2 cut(s)	218, 4922
PcsI	WCGNNNNNNNCGW	4 cut(s)	159, 168, 497, 2656
PctI	GAATGC	2 cut(s)	2810, 4302
PflFI	GACNNNGTC	2 cut(s)	137, 5390
PfoI	TCCNGGA	3 cut(s)	99, 4922, 4950
PinAI	ACCGGT	2 cut(s)	1269, 2162
PleI	GAGTC	8 cut(s)	263, 510, 1452, 1505, 2288, 2979, 4105, 5081
PmaCI	CACGTG	1 cut(s)	4763
PmlI	CACGTG	1 cut(s)	4763
PpsI	GAGTC	8 cut(s)	263, 510, 1452, 1505, 2288, 2979, 4105, 5081
Ppu21I	YACGTR	4 cut(s)	3107, 4417, 4586, 4763
PpuMI	RGGWCCY	1 cut(s)	2743
Psp124BI	GAGCTC	4 cut(s)	213, 1803, 1884, 3741
Psp1406I	AACGTT	2 cut(s)	4184, 5314
Psp5II	RGGWCCY	1 cut(s)	2743
PspCI	CACGTG	1 cut(s)	4763
PspEI	GGTNACC	1 cut(s)	3098
PspFI	CCCAGC	1 cut(s)	2757
PspPI	GGNCC	9 cut(s)	248, 2743, 2755, 2917, 4370, 4595, 4802, 4832, 5425
PspPPI	RGGWCCY	1 cut(s)	2743
PsrI	GAACNNNNNNTAC	2 cut(s)	861, 893
PstI	CTGCAG	7 cut(s)	1111, 2377, 2533, 3300, 3397, 3439, 5371
PstNI	CAGNNNCTG	3 cut(s)	1318, 1532, 2537
PsuI	RGATCY	7 cut(s)	670, 1889, 2446, 3557, 4440, 4621, 4934
PsyI	GACNNNGTC	2 cut(s)	137, 5390
PvuII	CAGCTG	2 cut(s)	2378, 5381
RruI	TCGCGA	1 cut(s)	150
RseI	CAYNNNNRTG	8 cut(s)	421, 1445, 1577, 1583, 2431, 2480, 5036, 5463
SacI	GAGCTC	4 cut(s)	213, 1803, 1884, 3741
SapI	GCTCTTC	2 cut(s)	218, 4922
Sau96I	GGNCC	9 cut(s)	248, 2743, 2755, 2917, 4370, 4595, 4802, 4832, 5425
SchI	GAGTC	8 cut(s)	264, 511, 1452, 1505, 2288, 2979, 4105, 5081
SduI	GDGCHC	6 cut(s)	213, 1803, 1884, 2131, 3741, 4515
SexAI	ACCWGGT	1 cut(s)	4834
SinI	GGWCC	7 cut(s)	248, 2743, 2917, 4370, 4595, 4832, 5425
SmiMI	CAYNNNNRTG	8 cut(s)	421, 1445, 1577, 1583, 2431, 2480, 5036, 5463
SmlI	CTYRAG	4 cut(s)	2626, 4611, 5108, 5405
SmoI	CTYRAG	4 cut(s)	2626, 4611, 5108, 5405
SnaBI	TACGTA	2 cut(s)	4417, 4586
SpeI	ACTAGT	1 cut(s)	5063
SphI	GCATGC	1 cut(s)	1832
SseBI	AGGCCT	3 cut(s)	2849, 3754, 4999
SspI	AATATT	3 cut(s)	2212, 3118, 3940
SstI	GAGCTC	4 cut(s)	213, 1803, 1884, 3741
StuI	AGGCCT	3 cut(s)	2849, 3754, 4999
StyI	CCWWGG	3 cut(s)	3874, 4285, 4643
TaqII	GACCGA	1 cut(s)	173
TatI	WGTACW	2 cut(s)	1757, 3406
TauI	GCSGC	2 cut(s)	225, 4334
TseFI	GTSAC	7 cut(s)	1508, 1952, 2515, 3637, 4758, 4913, 5022
Tsp45I	GTSAC	7 cut(s)	1508, 1952, 2515, 3637, 4758, 4913, 5022
TspGWI	ACGGA	1 cut(s)	5086
Tth111I	GACNNNGTC	2 cut(s)	137, 5390
Vha464I	CTTAAG	1 cut(s)	5108
VpaK11BI	GGWCC	7 cut(s)	248, 2743, 2917, 4370, 4595, 4832, 5425
XagI	CCTNNNNNAGG	1 cut(s)	2750
XceI	RCATGY	6 cut(s)	1180, 1832, 2314, 2436, 2500, 5199
XcmI	CCANNNNNNNNNTGG	4 cut(s)	1609, 2911, 3527, 4832
XmiI	GTMKAC	3 cut(s)	1102, 2594, 5016
ZraI	GACGTC	2 cut(s)	97, 172
Zsp2I	ATGCAT	1 cut(s)	4773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.