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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g26521 FvH4_7g26521 |
| rosa_chinensis | RchiOBHm_Chr1g0373181 |
| rosa_laevigata | RLG00000026845 |
| rosa_multiflora | Rmu_sc0000170.1_g000014 |
| rosa_rugosa | Rorug01G0376600 |
| rosa_samantha | Rh1AG385000 Rh1BG348900 Rh1CG362400 Rh1DG379900 |
| rosa_wichuraiana | Rw1G033960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 770 |
| AccI | GTMKAC | 2 cut(s) | 129, 855 |
| AccII | CGCG | 1 cut(s) | 1464 |
| AccIII | TCCGGA | 1 cut(s) | 623 |
| AciI | CCGC | 3 cut(s) | 245, 464, 1464 |
| AclWI | GGATC | 2 cut(s) | 713, 1415 |
| AcoI | YGGCCR | 1 cut(s) | 465 |
| AcsI | RAATTY | 3 cut(s) | 655, 1236, 1363 |
| AcuI | CTGAAG | 1 cut(s) | 663 |
| AfaI | GTAC | 4 cut(s) | 272, 1088, 1354, 1505 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 770 |
| AgsI | TTSAA | 9 cut(s) | 182, 286, 323, 350, 370, 692, 896, 1030, 1066 |
| AleI | CACNNNNGTG | 2 cut(s) | 315, 412 |
| Alw21I | GWGCWC | 2 cut(s) | 54, 517 |
| Alw26I | GTCTC | 1 cut(s) | 850 |
| AlwI | GGATC | 2 cut(s) | 713, 1415 |
| Aor13HI | TCCGGA | 1 cut(s) | 623 |
| AoxI | GGCC | 4 cut(s) | 38, 465, 1160, 1224 |
| ApeKI | GCWGC | 9 cut(s) | 476, 505, 1121, 1154, 1268, 1336, 1418, 1436, 1487 |
| ApoI | RAATTY | 3 cut(s) | 655, 1236, 1363 |
| AspLEI | GCGC | 1 cut(s) | 1418 |
| AspS9I | GGNCC | 4 cut(s) | 39, 64, 88, 1176 |
| AsuHPI | GGTGA | 5 cut(s) | 259, 563, 833, 1160, 1372 |
| AvaII | GGWCC | 3 cut(s) | 64, 88, 1176 |
| AxyI | CCTNAGG | 1 cut(s) | 108 |
| BanII | GRGCYC | 2 cut(s) | 147, 517 |
| BauI | CACGAG | 1 cut(s) | 1170 |
| Bbv12I | GWGCWC | 2 cut(s) | 54, 517 |
| BbvCI | CCTCAGC | 2 cut(s) | 213, 1056 |
| BbvI | GCAGC | 9 cut(s) | 488, 492, 1108, 1166, 1280, 1348, 1405, 1448, 1499 |
| BccI | CCATC | 5 cut(s) | 621, 772, 944, 1450, 1536 |
| BciVI | GTATCC | 1 cut(s) | 1517 |
| BclI | TGATCA | 3 cut(s) | 742, 805, 901 |
| BcoDI | GTCTC | 1 cut(s) | 850 |
| BfaI | CTAG | 4 cut(s) | 839, 1158, 1281, 1536 |
| BfmI | CTRYAG | 2 cut(s) | 828, 1434 |
| BfuI | GTATCC | 1 cut(s) | 1517 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 473 |
| Bme18I | GGWCC | 3 cut(s) | 64, 88, 1176 |
| BmgT120I | GGNCC | 4 cut(s) | 39, 64, 88, 1176 |
| BmiI | GGNNCC | 2 cut(s) | 914, 1177 |
| BmsI | GCATC | 7 cut(s) | 199, 232, 544, 823, 1042, 1476, 1543 |
| BpmI | CTGGAG | 2 cut(s) | 468, 1086 |
| Bpu10I | CCTNAGC | 3 cut(s) | 213, 941, 1056 |
| BpuEI | CTTGAG | 2 cut(s) | 334, 465 |
| BsaJI | CCNNGG | 1 cut(s) | 1221 |
| BsaWI | WCCGGW | 2 cut(s) | 623, 1549 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 770 |
| Bse1I | ACTGG | 4 cut(s) | 335, 461, 1088, 1163 |
| Bse21I | CCTNAGG | 1 cut(s) | 108 |
| BseAI | TCCGGA | 1 cut(s) | 623 |
| BseDI | CCNNGG | 1 cut(s) | 1221 |
| BseGI | GGATG | 6 cut(s) | 214, 632, 936, 1057, 1528, 1558 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 770 |
| BseMII | CTCAG | 7 cut(s) | 59, 99, 144, 204, 204, 951, 1047 |
| BseNI | ACTGG | 4 cut(s) | 335, 461, 1088, 1163 |
| BseXI | GCAGC | 9 cut(s) | 488, 492, 1108, 1166, 1280, 1348, 1405, 1448, 1499 |
| BsgI | GTGCAG | 3 cut(s) | 981, 1107, 1355 |
| Bsh1236I | CGCG | 1 cut(s) | 1464 |
| BshFI | GGCC | 4 cut(s) | 40, 467, 1162, 1226 |
| BsiHKAI | GWGCWC | 2 cut(s) | 54, 517 |
| BsiSI | CCGG | 2 cut(s) | 624, 1550 |
| BslFI | GGGAC | 3 cut(s) | 514, 680, 787 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 770 |
| BsmAI | GTCTC | 1 cut(s) | 850 |
| BsmFI | GGGAC | 3 cut(s) | 514, 680, 787 |
| BsmI | GAATGC | 2 cut(s) | 1222, 1304 |
| BsnI | GGCC | 4 cut(s) | 40, 467, 1162, 1226 |
| Bsp1286I | GDGCHC | 3 cut(s) | 54, 147, 517 |
| Bsp13I | TCCGGA | 1 cut(s) | 623 |
| Bsp143I | GATC | 6 cut(s) | 718, 742, 805, 887, 901, 1407 |
| BspACI | CCGC | 3 cut(s) | 245, 464, 1464 |
| BspANI | GGCC | 4 cut(s) | 40, 467, 1162, 1226 |
| BspCNI | CTCAG | 7 cut(s) | 60, 100, 145, 203, 205, 952, 1048 |
| BspEI | TCCGGA | 1 cut(s) | 623 |
| BspFNI | CGCG | 1 cut(s) | 1464 |
| BspHI | TCATGA | 2 cut(s) | 739, 1212 |
| BspLI | GGNNCC | 2 cut(s) | 914, 1177 |
| BspMAI | CTGCAG | 1 cut(s) | 1438 |
| BspPI | GGATC | 2 cut(s) | 713, 1415 |
| BsrI | ACTGG | 4 cut(s) | 335, 461, 1088, 1163 |
| BssECI | CCNNGG | 1 cut(s) | 1221 |
| BssMI | GATC | 6 cut(s) | 718, 742, 805, 887, 901, 1407 |
| BssNAI | GTATAC | 1 cut(s) | 130 |
| BssSI | CACGAG | 1 cut(s) | 1170 |
| BssT1I | CCWWGG | 1 cut(s) | 1221 |
| Bst1107I | GTATAC | 1 cut(s) | 130 |
| Bst2BI | CACGAG | 1 cut(s) | 1170 |
| Bst4CI | ACNGT | 1 cut(s) | 563 |
| Bst6I | CTCTTC | 3 cut(s) | 369, 639, 1434 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 209, 616 |
| BstC8I | GCNNGC | 2 cut(s) | 675, 966 |
| BstF5I | GGATG | 6 cut(s) | 214, 632, 936, 1057, 1528, 1558 |
| BstFNI | CGCG | 1 cut(s) | 1464 |
| BstHHI | GCGC | 1 cut(s) | 1418 |
| BstKTI | GATC | 6 cut(s) | 721, 745, 808, 890, 904, 1410 |
| BstMAI | GTCTC | 1 cut(s) | 850 |
| BstMBI | GATC | 6 cut(s) | 718, 742, 805, 887, 901, 1407 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 209, 473, 616, 833, 995 |
| BstNSI | RCATGY | 2 cut(s) | 758, 989 |
| BstSFI | CTRYAG | 2 cut(s) | 828, 1434 |
| BstUI | CGCG | 1 cut(s) | 1464 |
| BstV1I | GCAGC | 9 cut(s) | 488, 492, 1108, 1166, 1280, 1348, 1405, 1448, 1499 |
| BstZ17I | GTATAC | 1 cut(s) | 130 |
| Bsu36I | CCTNAGG | 1 cut(s) | 108 |
| BsuI | GTATCC | 1 cut(s) | 1517 |
| BsuRI | GGCC | 4 cut(s) | 40, 467, 1162, 1226 |
| BtsCI | GGATG | 6 cut(s) | 214, 632, 936, 1057, 1528, 1558 |
| BtsI | GCAGTG | 1 cut(s) | 1299 |
| BtsIMutI | CAGTG | 5 cut(s) | 54, 454, 568, 1081, 1299 |
| Cac8I | GCNNGC | 2 cut(s) | 675, 966 |
| CciI | TCATGA | 2 cut(s) | 739, 1212 |
| CfoI | GCGC | 1 cut(s) | 1418 |
| Cfr13I | GGNCC | 4 cut(s) | 39, 64, 88, 1176 |
| Csp6I | GTAC | 4 cut(s) | 271, 1087, 1353, 1504 |
| CviAII | CATG | 9 cut(s) | 204, 740, 755, 788, 809, 986, 1213, 1484, 1511 |
| CviQI | GTAC | 4 cut(s) | 271, 1087, 1353, 1504 |
| DpnI | GATC | 6 cut(s) | 720, 744, 807, 889, 903, 1409 |
| DpnII | GATC | 6 cut(s) | 718, 742, 805, 887, 901, 1407 |
| DraI | TTTAAA | 1 cut(s) | 583 |
| EaeI | YGGCCR | 1 cut(s) | 465 |
| Eam1104I | CTCTTC | 3 cut(s) | 369, 639, 1434 |
| EarI | CTCTTC | 3 cut(s) | 369, 639, 1434 |
| Ecl136II | GAGCTC | 1 cut(s) | 515 |
| Eco130I | CCWWGG | 1 cut(s) | 1221 |
| Eco24I | GRGCYC | 2 cut(s) | 147, 517 |
| Eco47I | GGWCC | 3 cut(s) | 64, 88, 1176 |
| Eco53kI | GAGCTC | 1 cut(s) | 515 |
| Eco57I | CTGAAG | 1 cut(s) | 663 |
| Eco81I | CCTNAGG | 1 cut(s) | 108 |
| EcoICRI | GAGCTC | 1 cut(s) | 515 |
| EcoO109I | RGGNCCY | 2 cut(s) | 64, 1176 |
| EcoRI | GAATTC | 1 cut(s) | 1236 |
| EcoT14I | CCWWGG | 1 cut(s) | 1221 |
| EcoT38I | GRGCYC | 2 cut(s) | 147, 517 |
| ErhI | CCWWGG | 1 cut(s) | 1221 |
| FaeI | CATG | 9 cut(s) | 207, 743, 758, 791, 812, 989, 1216, 1487, 1514 |
| FaqI | GGGAC | 3 cut(s) | 514, 680, 787 |
| FatI | CATG | 9 cut(s) | 203, 739, 754, 787, 808, 985, 1212, 1483, 1510 |
| FauNDI | CATATG | 1 cut(s) | 1128 |
| FbaI | TGATCA | 3 cut(s) | 742, 805, 901 |
| FblI | GTMKAC | 2 cut(s) | 129, 855 |
| FokI | GGATG | 5 cut(s) | 221, 639, 923, 1064, 1515 |
| FriOI | GRGCYC | 2 cut(s) | 147, 517 |
| FspBI | CTAG | 4 cut(s) | 839, 1158, 1281, 1536 |
| GlaI | GCGC | 1 cut(s) | 1417 |
| GsuI | CTGGAG | 2 cut(s) | 468, 1086 |
| HaeIII | GGCC | 4 cut(s) | 40, 467, 1162, 1226 |
| HapII | CCGG | 2 cut(s) | 624, 1550 |
| HhaI | GCGC | 1 cut(s) | 1418 |
| Hin1II | CATG | 9 cut(s) | 207, 743, 758, 791, 812, 989, 1216, 1487, 1514 |
| Hin6I | GCGC | 1 cut(s) | 1416 |
| HinP1I | GCGC | 1 cut(s) | 1416 |
| HincII | GTYRAC | 1 cut(s) | 814 |
| HindII | GTYRAC | 1 cut(s) | 814 |
| HindIII | AAGCTT | 1 cut(s) | 1200 |
| HinfI | GANTC | 8 cut(s) | 94, 155, 307, 443, 650, 1026, 1375, 1424 |
| HpaII | CCGG | 2 cut(s) | 624, 1550 |
| HphI | GGTGA | 5 cut(s) | 259, 563, 833, 1160, 1372 |
| Hpy166II | GTNNAC | 5 cut(s) | 130, 814, 856, 1089, 1506 |
| Hpy188I | TCNGA | 9 cut(s) | 61, 193, 222, 643, 961, 1011, 1189, 1252, 1472 |
| Hpy8I | GTNNAC | 5 cut(s) | 130, 814, 856, 1089, 1506 |
| HpyAV | CCTTC | 3 cut(s) | 1016, 1139, 1352 |
| HpyCH4III | ACNGT | 1 cut(s) | 563 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 209, 473, 616, 833, 995 |
| Hsp92II | CATG | 9 cut(s) | 207, 743, 758, 791, 812, 989, 1216, 1487, 1514 |
| HspAI | GCGC | 1 cut(s) | 1416 |
| Kpn2I | TCCGGA | 1 cut(s) | 623 |
| Ksp22I | TGATCA | 3 cut(s) | 742, 805, 901 |
| Kzo9I | GATC | 6 cut(s) | 718, 742, 805, 887, 901, 1407 |
| LmnI | GCTCC | 6 cut(s) | 512, 520, 918, 1011, 1344, 1444 |
| Lsp1109I | GCAGC | 9 cut(s) | 488, 492, 1108, 1166, 1280, 1348, 1405, 1448, 1499 |
| LweI | GCATC | 7 cut(s) | 199, 232, 544, 823, 1042, 1476, 1543 |
| MaeI | CTAG | 4 cut(s) | 839, 1158, 1281, 1536 |
| MaeIII | GTNAC | 2 cut(s) | 308, 1132 |
| MalI | GATC | 6 cut(s) | 720, 744, 807, 889, 903, 1409 |
| MboI | GATC | 6 cut(s) | 718, 742, 805, 887, 901, 1407 |
| MboII | GAAGA | 3 cut(s) | 386, 656, 1421 |
| MhlI | GDGCHC | 3 cut(s) | 54, 147, 517 |
| MluCI | AATT | 7 cut(s) | 162, 631, 655, 701, 735, 1236, 1363 |
| MlyI | GAGTC | 3 cut(s) | 88, 164, 316 |
| MroI | TCCGGA | 1 cut(s) | 623 |
| MseI | TTAA | 5 cut(s) | 234, 380, 582, 1197, 1478 |
| MslI | CAYNNNNRTG | 4 cut(s) | 315, 412, 537, 1211 |
| MspI | CCGG | 2 cut(s) | 624, 1550 |
| Mva1269I | GAATGC | 2 cut(s) | 1222, 1304 |
| MvnI | CGCG | 1 cut(s) | 1464 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 209, 473, 616, 833, 995 |
| NdeI | CATATG | 1 cut(s) | 1128 |
| NdeII | GATC | 6 cut(s) | 718, 742, 805, 887, 901, 1407 |
| NlaIII | CATG | 9 cut(s) | 207, 743, 758, 791, 812, 989, 1216, 1487, 1514 |
| NlaIV | GGNNCC | 2 cut(s) | 914, 1177 |
| NmuCI | GTSAC | 1 cut(s) | 308 |
| NspI | RCATGY | 2 cut(s) | 758, 989 |
| OliI | CACNNNNGTG | 2 cut(s) | 315, 412 |
| PagI | TCATGA | 2 cut(s) | 739, 1212 |
| PctI | GAATGC | 2 cut(s) | 1222, 1304 |
| PfeI | GAWTC | 5 cut(s) | 443, 650, 1026, 1375, 1424 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 770 |
| PleI | GAGTC | 3 cut(s) | 88, 163, 315 |
| PpsI | GAGTC | 3 cut(s) | 88, 163, 315 |
| PpuMI | RGGWCCY | 2 cut(s) | 64, 1176 |
| Psp124BI | GAGCTC | 1 cut(s) | 517 |
| Psp5II | RGGWCCY | 2 cut(s) | 64, 1176 |
| PspN4I | GGNNCC | 2 cut(s) | 914, 1177 |
| PspPI | GGNCC | 4 cut(s) | 39, 64, 88, 1176 |
| PspPPI | RGGWCCY | 2 cut(s) | 64, 1176 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 120, 152 |
| PstI | CTGCAG | 1 cut(s) | 1438 |
| RsaI | GTAC | 4 cut(s) | 272, 1088, 1354, 1505 |
| RsaNI | GTAC | 4 cut(s) | 271, 1087, 1353, 1504 |
| RseI | CAYNNNNRTG | 4 cut(s) | 315, 412, 537, 1211 |
| SacI | GAGCTC | 1 cut(s) | 517 |
| SaqAI | TTAA | 5 cut(s) | 234, 380, 582, 1197, 1478 |
| Sau3AI | GATC | 6 cut(s) | 718, 742, 805, 887, 901, 1407 |
| Sau96I | GGNCC | 4 cut(s) | 39, 64, 88, 1176 |
| SchI | GAGTC | 3 cut(s) | 88, 164, 316 |
| SduI | GDGCHC | 3 cut(s) | 54, 147, 517 |
| SfaNI | GCATC | 7 cut(s) | 199, 232, 544, 823, 1042, 1476, 1543 |
| SfcI | CTRYAG | 2 cut(s) | 828, 1434 |
| SinI | GGWCC | 3 cut(s) | 64, 88, 1176 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 315, 412, 537, 1211 |
| SmlI | CTYRAG | 2 cut(s) | 313, 480 |
| SmoI | CTYRAG | 2 cut(s) | 313, 480 |
| Sse9I | AATT | 7 cut(s) | 162, 631, 655, 701, 735, 1236, 1363 |
| SsiI | CCGC | 3 cut(s) | 245, 464, 1464 |
| SspMI | CTAG | 4 cut(s) | 839, 1158, 1281, 1536 |
| SstI | GAGCTC | 1 cut(s) | 517 |
| StyI | CCWWGG | 1 cut(s) | 1221 |
| TaaI | ACNGT | 1 cut(s) | 563 |
| TaqI | TCGA | 1 cut(s) | 341 |
| TasI | AATT | 7 cut(s) | 162, 631, 655, 701, 735, 1236, 1363 |
| TatI | WGTACW | 2 cut(s) | 1352, 1503 |
| TauI | GCSGC | 2 cut(s) | 467, 1467 |
| TfiI | GAWTC | 5 cut(s) | 443, 650, 1026, 1375, 1424 |
| Tru1I | TTAA | 5 cut(s) | 234, 380, 582, 1197, 1478 |
| Tru9I | TTAA | 5 cut(s) | 234, 380, 582, 1197, 1478 |
| TscAI | CASTG | 5 cut(s) | 54, 461, 568, 1088, 1299 |
| TseFI | GTSAC | 1 cut(s) | 308 |
| TseI | GCWGC | 9 cut(s) | 476, 505, 1121, 1154, 1268, 1336, 1418, 1436, 1487 |
| Tsp45I | GTSAC | 1 cut(s) | 308 |
| TspDTI | ATGAA | 7 cut(s) | 414, 728, 944, 1158, 1229, 1326, 1527 |
| TspRI | CASTG | 5 cut(s) | 54, 461, 568, 1088, 1299 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 770 |
| VpaK11BI | GGWCC | 3 cut(s) | 64, 88, 1176 |
| XapI | RAATTY | 3 cut(s) | 655, 1236, 1363 |
| XceI | RCATGY | 2 cut(s) | 758, 989 |
| XmiI | GTMKAC | 2 cut(s) | 129, 855 |
| XspI | CTAG | 4 cut(s) | 839, 1158, 1281, 1536 |