Domain of unknown function (DUF3475)
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G51670 AT5G51670 |
| fragaria_vesca | FvH4_7g28220 |
| malus_domestica | MD01G1186200.v1.1 MD07G1258400.v1.1 |
| prunus_persica | Prupe.2G282900_v2.0.a1 |
| pyrus_communis | pycom01g19780 |
| rosa_chinensis | RchiOBHm_Chr1g0375201 |
| rosa_laevigata | RLG00000026680 |
| rosa_multiflora | Rmu_sc0000554.1_g000026 |
| rosa_roxburghii | Rroxscaffold_4G00282950 |
| rosa_rugosa | Rorug01G0389000 |
| rosa_samantha | Rh1AG399700 Rh1BG364800 Rh1CG377700 Rh1DG395400 |
| rosa_wichuraiana | Rw1G035480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 470 |
| Acc36I | ACCTGC | 1 cut(s) | 1359 |
| AccB1I | GGYRCC | 1 cut(s) | 1264 |
| AccII | CGCG | 3 cut(s) | 485, 566, 974 |
| AciI | CCGC | 9 cut(s) | 36, 84, 232, 483, 953, 956, 974, 978, 1205 |
| AclI | AACGTT | 1 cut(s) | 370 |
| AclWI | GGATC | 6 cut(s) | 187, 433, 603, 1139, 1180, 1193 |
| AcoI | YGGCCR | 4 cut(s) | 309, 693, 783, 975 |
| AcsI | RAATTY | 1 cut(s) | 1000 |
| AcuI | CTGAAG | 1 cut(s) | 584 |
| AcyI | GRCGYC | 1 cut(s) | 348 |
| AfaI | GTAC | 9 cut(s) | 63, 470, 494, 560, 811, 843, 886, 964, 1095 |
| AfeI | AGCGCT | 1 cut(s) | 987 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1164, 1425 |
| AflIII | ACRYGT | 1 cut(s) | 564 |
| AgsI | TTSAA | 3 cut(s) | 368, 379, 1357 |
| AjnI | CCWGG | 1 cut(s) | 695 |
| Alw21I | GWGCWC | 4 cut(s) | 288, 513, 851, 1114 |
| Alw26I | GTCTC | 7 cut(s) | 203, 247, 275, 396, 616, 657, 668 |
| AlwI | GGATC | 6 cut(s) | 187, 433, 603, 1139, 1180, 1193 |
| Ama87I | CYCGRG | 1 cut(s) | 394 |
| Aor51HI | AGCGCT | 1 cut(s) | 987 |
| AoxI | GGCC | 6 cut(s) | 139, 309, 693, 783, 832, 975 |
| ApaI | GGGCCC | 1 cut(s) | 836 |
| ApeKI | GCWGC | 2 cut(s) | 487, 1328 |
| ApoI | RAATTY | 1 cut(s) | 1000 |
| AseI | ATTAAT | 1 cut(s) | 1422 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 15 |
| AspA2I | CCTAGG | 1 cut(s) | 1189 |
| AspLEI | GCGC | 5 cut(s) | 281, 487, 974, 988, 1213 |
| AspS9I | GGNCC | 2 cut(s) | 832, 833 |
| AsuHPI | GGTGA | 1 cut(s) | 1194 |
| AsuNHI | GCTAGC | 1 cut(s) | 1153 |
| AvaI | CYCGRG | 1 cut(s) | 394 |
| AvrII | CCTAGG | 1 cut(s) | 1189 |
| AxyI | CCTNAGG | 1 cut(s) | 23 |
| BaeGI | GKGCMC | 2 cut(s) | 836, 1269 |
| BalI | TGGCCA | 2 cut(s) | 311, 695 |
| BamHI | GGATCC | 1 cut(s) | 1185 |
| BanI | GGYRCC | 1 cut(s) | 1264 |
| BanII | GRGCYC | 4 cut(s) | 288, 513, 836, 1114 |
| Bbv12I | GWGCWC | 4 cut(s) | 288, 513, 851, 1114 |
| BbvI | GCAGC | 2 cut(s) | 499, 1340 |
| BccI | CCATC | 3 cut(s) | 47, 430, 1009 |
| BceAI | ACGGC | 1 cut(s) | 828 |
| BciT130I | CCWGG | 1 cut(s) | 697 |
| BclI | TGATCA | 4 cut(s) | 802, 871, 1005, 1026 |
| BcoDI | GTCTC | 7 cut(s) | 203, 247, 275, 396, 616, 657, 668 |
| BfaI | CTAG | 8 cut(s) | 324, 860, 968, 1059, 1154, 1190, 1346, 1449 |
| BfmI | CTRYAG | 1 cut(s) | 1439 |
| BfoI | RGCGCY | 1 cut(s) | 989 |
| BfuAI | ACCTGC | 1 cut(s) | 1359 |
| BisI | GCNGC | 6 cut(s) | 488, 953, 956, 975, 978, 1329 |
| BlnI | CCTAGG | 1 cut(s) | 1189 |
| BlpI | GCTNAGC | 1 cut(s) | 282 |
| BlsI | GCNGC | 6 cut(s) | 489, 954, 957, 976, 979, 1330 |
| BmcAI | AGTACT | 2 cut(s) | 886, 964 |
| Bme1390I | CCNGG | 1 cut(s) | 697 |
| BmeT110I | CYCGRG | 1 cut(s) | 394 |
| BmgT120I | GGNCC | 2 cut(s) | 832, 833 |
| BmiI | GGNNCC | 4 cut(s) | 662, 834, 1187, 1266 |
| BmrFI | CCNGG | 1 cut(s) | 697 |
| BmsI | GCATC | 3 cut(s) | 46, 1045, 1272 |
| BmtI | GCTAGC | 1 cut(s) | 1157 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 500, 532, 920, 952 |
| Bpu10I | CCTNAGC | 1 cut(s) | 572 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 282 |
| BsaBI | GATNNNNATC | 1 cut(s) | 870 |
| BsaHI | GRCGYC | 1 cut(s) | 348 |
| BsaI | GGTCTC | 2 cut(s) | 396, 657 |
| BsaJI | CCNNGG | 2 cut(s) | 780, 1189 |
| BsaWI | WCCGGW | 2 cut(s) | 911, 1147 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 620, 650 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1164, 1425 |
| Bse1I | ACTGG | 1 cut(s) | 525 |
| Bse21I | CCTNAGG | 1 cut(s) | 23 |
| Bse8I | GATNNNNATC | 1 cut(s) | 870 |
| BseBI | CCWGG | 1 cut(s) | 697 |
| BseDI | CCNNGG | 2 cut(s) | 780, 1189 |
| BseGI | GGATG | 2 cut(s) | 71, 1069 |
| BseJI | GATNNNNATC | 1 cut(s) | 870 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1164, 1425 |
| BseMII | CTCAG | 5 cut(s) | 273, 280, 370, 563, 789 |
| BseNI | ACTGG | 1 cut(s) | 525 |
| BseRI | GAGGAG | 3 cut(s) | 146, 1137, 1255 |
| BseSI | GKGCMC | 2 cut(s) | 836, 1269 |
| BseX3I | CGGCCG | 1 cut(s) | 975 |
| BseXI | GCAGC | 2 cut(s) | 499, 1340 |
| Bsh1236I | CGCG | 3 cut(s) | 485, 566, 974 |
| Bsh1285I | CGRYCG | 2 cut(s) | 978, 1100 |
| BshFI | GGCC | 6 cut(s) | 141, 311, 695, 785, 834, 977 |
| BshNI | GGYRCC | 1 cut(s) | 1264 |
| BsiEI | CGRYCG | 2 cut(s) | 978, 1100 |
| BsiHKAI | GWGCWC | 4 cut(s) | 288, 513, 851, 1114 |
| BsiHKCI | CYCGRG | 1 cut(s) | 394 |
| BsiSI | CCGG | 3 cut(s) | 912, 1148, 1158 |
| BslFI | GGGAC | 1 cut(s) | 553 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1164, 1425 |
| BsmAI | GTCTC | 7 cut(s) | 203, 247, 275, 396, 616, 657, 668 |
| BsmBI | CGTCTC | 2 cut(s) | 203, 247 |
| BsmFI | GGGAC | 1 cut(s) | 553 |
| BsnI | GGCC | 6 cut(s) | 141, 311, 695, 785, 834, 977 |
| Bso31I | GGTCTC | 2 cut(s) | 396, 657 |
| BsoBI | CYCGRG | 1 cut(s) | 394 |
| Bsp120I | GGGCCC | 1 cut(s) | 832 |
| Bsp1286I | GDGCHC | 6 cut(s) | 288, 513, 836, 851, 1114, 1269 |
| Bsp1407I | TGTACA | 1 cut(s) | 492 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 282 |
| BspACI | CCGC | 9 cut(s) | 36, 84, 232, 483, 953, 956, 974, 978, 1205 |
| BspANI | GGCC | 6 cut(s) | 141, 311, 695, 785, 834, 977 |
| BspCNI | CTCAG | 5 cut(s) | 274, 279, 369, 564, 788 |
| BspFNI | CGCG | 3 cut(s) | 485, 566, 974 |
| BspLI | GGNNCC | 4 cut(s) | 662, 834, 1187, 1266 |
| BspMAI | CTGCAG | 1 cut(s) | 1443 |
| BspMI | ACCTGC | 1 cut(s) | 1359 |
| BspOI | GCTAGC | 1 cut(s) | 1157 |
| BspPI | GGATC | 6 cut(s) | 187, 433, 603, 1139, 1180, 1193 |
| BspT107I | GGYRCC | 1 cut(s) | 1264 |
| BspTNI | GGTCTC | 2 cut(s) | 396, 657 |
| BsrGI | TGTACA | 1 cut(s) | 492 |
| BsrI | ACTGG | 1 cut(s) | 525 |
| BssECI | CCNNGG | 2 cut(s) | 780, 1189 |
| BssNI | GRCGYC | 1 cut(s) | 348 |
| BssT1I | CCWWGG | 1 cut(s) | 1189 |
| Bst2UI | CCWGG | 1 cut(s) | 697 |
| Bst4CI | ACNGT | 3 cut(s) | 679, 790, 1098 |
| Bst6I | CTCTTC | 2 cut(s) | 394, 549 |
| BstACI | GRCGYC | 1 cut(s) | 348 |
| BstAUI | TGTACA | 1 cut(s) | 492 |
| BstC8I | GCNNGC | 5 cut(s) | 84, 139, 277, 1155, 1209 |
| BstDEI | CTNAG | 6 cut(s) | 23, 266, 282, 356, 572, 775 |
| BstF5I | GGATG | 2 cut(s) | 71, 1069 |
| BstFNI | CGCG | 3 cut(s) | 485, 566, 974 |
| BstH2I | RGCGCY | 1 cut(s) | 989 |
| BstHHI | GCGC | 5 cut(s) | 281, 487, 974, 988, 1213 |
| BstMAI | GTCTC | 7 cut(s) | 203, 247, 275, 396, 616, 657, 668 |
| BstMCI | CGRYCG | 2 cut(s) | 978, 1100 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 88, 339, 949, 983, 1109 |
| BstNI | CCWGG | 1 cut(s) | 697 |
| BstSCI | CCNGG | 1 cut(s) | 695 |
| BstSFI | CTRYAG | 1 cut(s) | 1439 |
| BstSLI | GKGCMC | 2 cut(s) | 836, 1269 |
| BstUI | CGCG | 3 cut(s) | 485, 566, 974 |
| BstV1I | GCAGC | 2 cut(s) | 499, 1340 |
| BstX2I | RGATCY | 2 cut(s) | 595, 1185 |
| BstYI | RGATCY | 2 cut(s) | 595, 1185 |
| BstZI | CGGCCG | 1 cut(s) | 975 |
| Bsu36I | CCTNAGG | 1 cut(s) | 23 |
| BsuRI | GGCC | 6 cut(s) | 141, 311, 695, 785, 834, 977 |
| BtsCI | GGATG | 2 cut(s) | 71, 1069 |
| BtsIMutI | CAGTG | 2 cut(s) | 518, 786 |
| BveI | ACCTGC | 1 cut(s) | 1359 |
| Cac8I | GCNNGC | 5 cut(s) | 84, 139, 277, 1155, 1209 |
| CciNI | GCGGCCGC | 1 cut(s) | 975 |
| CfoI | GCGC | 5 cut(s) | 281, 487, 974, 988, 1213 |
| Cfr13I | GGNCC | 2 cut(s) | 832, 833 |
| CseI | GACGC | 4 cut(s) | 263, 356, 555, 572 |
| Csp6I | GTAC | 9 cut(s) | 62, 469, 493, 559, 810, 842, 885, 963, 1094 |
| CviAII | CATG | 3 cut(s) | 190, 684, 1261 |
| CviQI | GTAC | 9 cut(s) | 62, 469, 493, 559, 810, 842, 885, 963, 1094 |
| DdeI | CTNAG | 6 cut(s) | 23, 266, 282, 356, 572, 775 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 470 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 470 |
| EaeI | YGGCCR | 4 cut(s) | 309, 693, 783, 975 |
| EagI | CGGCCG | 1 cut(s) | 975 |
| Eam1104I | CTCTTC | 2 cut(s) | 394, 549 |
| EarI | CTCTTC | 2 cut(s) | 394, 549 |
| EciI | GGCGGA | 1 cut(s) | 25 |
| Ecl136II | GAGCTC | 3 cut(s) | 286, 511, 1112 |
| EclXI | CGGCCG | 1 cut(s) | 975 |
| Eco130I | CCWWGG | 1 cut(s) | 1189 |
| Eco147I | AGGCCT | 1 cut(s) | 141 |
| Eco24I | GRGCYC | 4 cut(s) | 288, 513, 836, 1114 |
| Eco31I | GGTCTC | 2 cut(s) | 396, 657 |
| Eco47III | AGCGCT | 1 cut(s) | 987 |
| Eco52I | CGGCCG | 1 cut(s) | 975 |
| Eco53kI | GAGCTC | 3 cut(s) | 286, 511, 1112 |
| Eco57I | CTGAAG | 1 cut(s) | 584 |
| Eco81I | CCTNAGG | 1 cut(s) | 23 |
| Eco88I | CYCGRG | 1 cut(s) | 394 |
| EcoICRI | GAGCTC | 3 cut(s) | 286, 511, 1112 |
| EcoRII | CCWGG | 1 cut(s) | 695 |
| EcoT14I | CCWWGG | 1 cut(s) | 1189 |
| EcoT38I | GRGCYC | 4 cut(s) | 288, 513, 836, 1114 |
| ErhI | CCWWGG | 1 cut(s) | 1189 |
| Esp3I | CGTCTC | 2 cut(s) | 203, 247 |
| FaeI | CATG | 3 cut(s) | 193, 687, 1264 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 391, 423 |
| FaqI | GGGAC | 1 cut(s) | 553 |
| FatI | CATG | 3 cut(s) | 189, 683, 1260 |
| FauI | CCCGC | 1 cut(s) | 91 |
| FbaI | TGATCA | 4 cut(s) | 802, 871, 1005, 1026 |
| Fnu4HI | GCNGC | 6 cut(s) | 488, 953, 956, 975, 978, 1329 |
| FokI | GGATG | 2 cut(s) | 58, 1076 |
| FriOI | GRGCYC | 4 cut(s) | 288, 513, 836, 1114 |
| Fsp4HI | GCNGC | 6 cut(s) | 488, 953, 956, 975, 978, 1329 |
| FspBI | CTAG | 8 cut(s) | 324, 860, 968, 1059, 1154, 1190, 1346, 1449 |
| GlaI | GCGC | 5 cut(s) | 280, 486, 973, 987, 1212 |
| GluI | GCNGC | 6 cut(s) | 488, 953, 956, 975, 978, 1329 |
| HaeII | RGCGCY | 1 cut(s) | 989 |
| HaeIII | GGCC | 6 cut(s) | 141, 311, 695, 785, 834, 977 |
| HapII | CCGG | 3 cut(s) | 912, 1148, 1158 |
| HgaI | GACGC | 4 cut(s) | 263, 356, 555, 572 |
| HhaI | GCGC | 5 cut(s) | 281, 487, 974, 988, 1213 |
| Hin1I | GRCGYC | 1 cut(s) | 348 |
| Hin1II | CATG | 3 cut(s) | 193, 687, 1264 |
| Hin6I | GCGC | 5 cut(s) | 279, 485, 972, 986, 1211 |
| HinP1I | GCGC | 5 cut(s) | 279, 485, 972, 986, 1211 |
| HincII | GTYRAC | 1 cut(s) | 475 |
| HindII | GTYRAC | 1 cut(s) | 475 |
| HindIII | AAGCTT | 2 cut(s) | 361, 667 |
| HinfI | GANTC | 7 cut(s) | 209, 228, 327, 688, 921, 929, 1125 |
| HpaII | CCGG | 3 cut(s) | 912, 1148, 1158 |
| HphI | GGTGA | 1 cut(s) | 1194 |
| Hpy166II | GTNNAC | 3 cut(s) | 475, 793, 1094 |
| Hpy188I | TCNGA | 4 cut(s) | 181, 359, 425, 802 |
| Hpy188III | TCNNGA | 6 cut(s) | 130, 292, 396, 658, 673, 875 |
| Hpy8I | GTNNAC | 3 cut(s) | 475, 793, 1094 |
| Hpy99I | CGWCG | 7 cut(s) | 116, 254, 257, 293, 323, 350, 566 |
| HpyAV | CCTTC | 7 cut(s) | 26, 218, 272, 532, 762, 807, 1387 |
| HpyCH4III | ACNGT | 3 cut(s) | 679, 790, 1098 |
| HpyCH4IV | ACGT | 4 cut(s) | 64, 111, 370, 471 |
| HpyCH4V | TGCA | 8 cut(s) | 59, 342, 719, 1291, 1307, 1368, 1410, 1441 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 88, 339, 949, 983, 1109 |
| HpyF3I | CTNAG | 6 cut(s) | 23, 266, 282, 356, 572, 775 |
| HpySE526I | ACGT | 4 cut(s) | 64, 111, 370, 471 |
| Hsp92I | GRCGYC | 1 cut(s) | 348 |
| Hsp92II | CATG | 3 cut(s) | 193, 687, 1264 |
| HspAI | GCGC | 5 cut(s) | 279, 485, 972, 986, 1211 |
| Ksp22I | TGATCA | 4 cut(s) | 802, 871, 1005, 1026 |
| LmnI | GCTCC | 4 cut(s) | 159, 846, 948, 1242 |
| Lsp1109I | GCAGC | 2 cut(s) | 499, 1340 |
| LweI | GCATC | 3 cut(s) | 46, 1045, 1272 |
| MaeI | CTAG | 8 cut(s) | 324, 860, 968, 1059, 1154, 1190, 1346, 1449 |
| MaeII | ACGT | 4 cut(s) | 64, 111, 370, 471 |
| MaeIII | GTNAC | 5 cut(s) | 65, 679, 914, 1104, 1200 |
| MboII | GAAGA | 6 cut(s) | 411, 566, 590, 619, 900, 1033 |
| MflI | RGATCY | 2 cut(s) | 595, 1185 |
| MhlI | GDGCHC | 6 cut(s) | 288, 513, 836, 851, 1114, 1269 |
| MlsI | TGGCCA | 2 cut(s) | 311, 695 |
| MluCI | AATT | 3 cut(s) | 1000, 1414, 1456 |
| MluI | ACGCGT | 1 cut(s) | 564 |
| MluNI | TGGCCA | 2 cut(s) | 311, 695 |
| MlyI | GAGTC | 4 cut(s) | 218, 237, 938, 1134 |
| MmeI | TCCRAC | 2 cut(s) | 573, 957 |
| Mox20I | TGGCCA | 2 cut(s) | 311, 695 |
| MroXI | GAANNNNTTC | 1 cut(s) | 15 |
| MscI | TGGCCA | 2 cut(s) | 311, 695 |
| MseI | TTAA | 3 cut(s) | 30, 894, 1422 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1013 |
| Msp20I | TGGCCA | 2 cut(s) | 311, 695 |
| MspA1I | CMGCKG | 2 cut(s) | 490, 1207 |
| MspI | CCGG | 3 cut(s) | 912, 1148, 1158 |
| MspR9I | CCNGG | 1 cut(s) | 697 |
| MvaI | CCWGG | 1 cut(s) | 697 |
| MvnI | CGCG | 3 cut(s) | 485, 566, 974 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 88, 339, 949, 983, 1109 |
| NheI | GCTAGC | 1 cut(s) | 1153 |
| NlaIII | CATG | 3 cut(s) | 193, 687, 1264 |
| NlaIV | GGNNCC | 4 cut(s) | 662, 834, 1187, 1266 |
| NmeAIII | GCCGAG | 3 cut(s) | 761, 1110, 1115 |
| NmuCI | GTSAC | 3 cut(s) | 65, 679, 1200 |
| NotI | GCGGCCGC | 1 cut(s) | 975 |
| PceI | AGGCCT | 1 cut(s) | 141 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 246, 468, 1082 |
| PdmI | GAANNNNTTC | 1 cut(s) | 15 |
| PfeI | GAWTC | 3 cut(s) | 327, 688, 921 |
| PkrI | GCNGC | 6 cut(s) | 489, 954, 957, 976, 979, 1330 |
| PleI | GAGTC | 4 cut(s) | 217, 236, 937, 1133 |
| PpsI | GAGTC | 4 cut(s) | 217, 236, 937, 1133 |
| PshBI | ATTAAT | 1 cut(s) | 1422 |
| Psp124BI | GAGCTC | 3 cut(s) | 288, 513, 1114 |
| Psp1406I | AACGTT | 1 cut(s) | 370 |
| Psp6I | CCWGG | 1 cut(s) | 695 |
| PspGI | CCWGG | 1 cut(s) | 695 |
| PspN4I | GGNNCC | 4 cut(s) | 662, 834, 1187, 1266 |
| PspOMI | GGGCCC | 1 cut(s) | 832 |
| PspPI | GGNCC | 2 cut(s) | 832, 833 |
| PstI | CTGCAG | 1 cut(s) | 1443 |
| PsuI | RGATCY | 2 cut(s) | 595, 1185 |
| PvuII | CAGCTG | 1 cut(s) | 490 |
| RsaI | GTAC | 9 cut(s) | 63, 470, 494, 560, 811, 843, 886, 964, 1095 |
| RsaNI | GTAC | 9 cut(s) | 62, 469, 493, 559, 810, 842, 885, 963, 1094 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1013 |
| SacI | GAGCTC | 3 cut(s) | 288, 513, 1114 |
| SaqAI | TTAA | 3 cut(s) | 30, 894, 1422 |
| SatI | GCNGC | 6 cut(s) | 488, 953, 956, 975, 978, 1329 |
| Sau96I | GGNCC | 2 cut(s) | 832, 833 |
| ScaI | AGTACT | 2 cut(s) | 886, 964 |
| SchI | GAGTC | 4 cut(s) | 218, 237, 938, 1134 |
| ScrFI | CCNGG | 1 cut(s) | 697 |
| SduI | GDGCHC | 6 cut(s) | 288, 513, 836, 851, 1114, 1269 |
| SfaNI | GCATC | 3 cut(s) | 46, 1045, 1272 |
| SfcI | CTRYAG | 1 cut(s) | 1439 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1013 |
| Sse9I | AATT | 3 cut(s) | 1000, 1414, 1456 |
| SseBI | AGGCCT | 1 cut(s) | 141 |
| SsiI | CCGC | 9 cut(s) | 36, 84, 232, 483, 953, 956, 974, 978, 1205 |
| SspMI | CTAG | 8 cut(s) | 324, 860, 968, 1059, 1154, 1190, 1346, 1449 |
| SstI | GAGCTC | 3 cut(s) | 288, 513, 1114 |
| StuI | AGGCCT | 1 cut(s) | 141 |
| StyD4I | CCNGG | 1 cut(s) | 695 |
| StyI | CCWWGG | 1 cut(s) | 1189 |
| TaaI | ACNGT | 3 cut(s) | 679, 790, 1098 |
| TaiI | ACGT | 4 cut(s) | 67, 114, 373, 474 |
| TaqI | TCGA | 9 cut(s) | 9, 54, 129, 149, 222, 291, 428, 462, 672 |
| TasI | AATT | 3 cut(s) | 1000, 1414, 1456 |
| TatI | WGTACW | 3 cut(s) | 492, 884, 962 |
| TauI | GCSGC | 4 cut(s) | 955, 958, 977, 980 |
| TfiI | GAWTC | 3 cut(s) | 327, 688, 921 |
| Tru1I | TTAA | 3 cut(s) | 30, 894, 1422 |
| Tru9I | TTAA | 3 cut(s) | 30, 894, 1422 |
| TscAI | CASTG | 2 cut(s) | 525, 793 |
| TseFI | GTSAC | 3 cut(s) | 65, 679, 1200 |
| TseI | GCWGC | 2 cut(s) | 487, 1328 |
| Tsp45I | GTSAC | 3 cut(s) | 65, 679, 1200 |
| TspDTI | ATGAA | 1 cut(s) | 519 |
| TspGWI | ACGGA | 5 cut(s) | 185, 307, 859, 933, 1337 |
| TspRI | CASTG | 2 cut(s) | 525, 793 |
| VspI | ATTAAT | 1 cut(s) | 1422 |
| XapI | RAATTY | 1 cut(s) | 1000 |
| XmaJI | CCTAGG | 1 cut(s) | 1189 |
| XmnI | GAANNNNTTC | 1 cut(s) | 15 |
| XspI | CTAG | 8 cut(s) | 324, 860, 968, 1059, 1154, 1190, 1346, 1449 |
| ZrmI | AGTACT | 2 cut(s) | 886, 964 |