FvH4_7g28850

GMC oxidoreductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0010788
Physical Location & Seq
Reverse (-)
21311935 .. 21315137
3203 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g28850.t1

Sequence Viewer

Length: 1872 bp
ATGGATTTCAGATGGTGGAGAAGATCATTCTCTGGAGCTTTGCTTTCTTGGATGTTCTTCTTTCTTCGCATTTCTTGTTTGGACAAAGCTCCAGACTTCACATTTGTGCACGAAGCAACGTCGGCTCCGCTAGAGATTTTCTACGACTACATAATTGTCGGCGGCGGTACTGCCGGGTGTCCTCTAGCTGCTACTCTCTCGCACGGCGACGCAAAAGTCTTAGTCCTGGAACGTGGTGGCTCGCCCTACACTAACCCTAACATCACCGACATTGGCAACTTTGCTTCTGTTCTTCTGGACAAGTCTCCCACTTCCCCGGCGCAGCCCTTCACCTCCGAGGATGGTGTCTACAATGCAAGGGCACGCATCCTTGGCGGCGGCTCAGCTGTCAATGCCGGGTTTTACTCGCGTGCCAGCACGCCCTACATCAAGGAAGCGGGGTGGAACCAAAAATGGGTCGAACAGGCTTATGAATGGGTTGAACAAGTTGTGGCATTTCAACCTCCCATGTTGGAGTGGGAGACTGCTCTAAGAGATGGCTTGCTTGAAGTCGGAGTGTTGCCGAATAACGGCTATACCTTCAACCATTCCTACGGTACTAAAGTCGGAGGTACCATTTTCGACAGAGAAGGCCATAGACACACCGCCGCGGATTTGCTTGAGTATGCAAACCCGAGCAGTATCACCGTCTACTTGCATGCCATTGTGCACAAAGTTTTGTTTAGACGCATTCCCGGAAGGGCAAGGCCTCAAGCTTATGGTGTGATATATAAAGATGCAAATGGAGTTAGGCACCAAGCTTACCTAAACAGTGACCCCAAGAATGAGATTATATTAACAGCTGGAGCTATTGGGAGTCCTCAGCTACTGATGCTAAGTGGTATTGGGCCGGGTTACCATCTTCAGAAGCACGGCATTCAGATGGTGGTGGATCAGCCGTTGGTGGGGCAAGGAATGGCTGATAATCCAATGAACGTCCTCCTCATTCCGTCACCTCTGCCGGTTGAGGTGTCTCTGGTTCAAGTTGTAGGCATAACCAGATTTGATACCTTCATTGAAGGAGCTAGCGGATTGAGCTTGGTTTATCCTTTGGCTCAAAGGCTTGCTAAGAGCTTTAGGCTCATATTGAATGAGGGTAATTATGAGCCTTTCAAAGTTGTACCAGAAGCCAAGCCGATAGCAGTAGACACAGTAAACGCAGTTGTGAACGGGACCCTGAGAGCTGGAGTCATCCTTGAAAAAATCACAGGTCCGCTCTCCAGAGGTCATCTAGAGCTGAGGAACCTGGATCCTGATGACACTCCGTTTGTCACATTCAACTACTTCAAAGAGCCAGAGGACTTGAGGAGGTGCATTCAGGGTATGAGGACCATTATCAGTGTGATCAATTCCAAAGCCTTTTCGAAGTTCCGTTACAAGAAGATGCCAATCGAAGCTCTCATTAAACTGATGCTGACTTTGCCGATTAACAATAGGCGAAGACATGCGAACGCTATGTTTTCCTTGGAGCAATTTTGCATAGACACAGTGATGACCATATGGCATTATCATGGAGGTTGTCAAGTTGGGAGGGTTGTGGACAAAGAGTACAGGGTGCTTGGTGTTGATTCACTTAGGGTTGTTGATGGATCCACATTTCATCAGACTCCAGGAACTAATCCTCAAGCTACAGTCATGATGCTTGGCAGGCAAGTATACACTAAGCATGTAATCATGAAACTATACTGTATGTATAGTAATCAGTTGCTAATCAATTTTCTTTCCCGTAATGTAGGTATGTGGGAGAAAGGATTGTTCATGAAAGATACCTATCTCGAAGATCAGAAGAGAAGAATTGATCGAGTACATAATGTCGATGGCGCGCGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GMC_oxred_C GMC_oxred_N

Protein Analysis

624

Amino Acids

69.71

Weight (kDa)

8.95

Isoelectric Point (pI)

36.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GMC_oxred_N PF00732 48 - 323 1.4e-16 GMC oxidoreductase
GMC_oxred_C PF05199 418 - 562 2.3e-26 GMC oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010788)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G56060 AT5G51930 AT5G51930 AT5G51950 AT5G51950 AT5G51950
fragaria_vesca FvH4_7g28850
malus_domestica MD01G1194300.v1.1
prunus_persica Prupe.2G288400_v2.0.a1
rosa_chinensis RchiOBHm_Chr1g0376521
rosa_laevigata RLG00000026604
rosa_multiflora Rmu_sc0001308.1_g000024 Rmu_sc0016049.1_g000002
rosa_roxburghii Rroxscaffold_4G00282040
rosa_rugosa Rorug01G0396200
rosa_samantha Rh1AG408000 Rh1BG372000 Rh1CG385800 Rh1DG403000
rosa_wichuraiana Rw1G036150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 215
Acc65I GGTACC 1 cut(s) 611
AccB1I GGYRCC 2 cut(s) 611, 792
AccBSI CCGCTC 1 cut(s) 1255
AccI GTMKAC 4 cut(s) 348, 690, 1185, 1695
AccII CGCG 4 cut(s) 409, 650, 1862, 1864
AclWI GGATC 5 cut(s) 939, 1283, 1296, 1623, 1636
AcuI CTGAAG 1 cut(s) 887
AfaI GTAC 6 cut(s) 169, 598, 613, 1161, 1589, 1845
AfiI CCNNNNNNNGG 3 cut(s) 454, 569, 944
AjnI CCWGG 3 cut(s) 225, 1284, 1648
AleI CACNNNNGTG 1 cut(s) 104
Alw21I GWGCWC 2 cut(s) 111, 711
Alw26I GTCTC 3 cut(s) 309, 515, 1017
Alw44I GTGCAC 2 cut(s) 107, 707
AlwI GGATC 5 cut(s) 939, 1283, 1296, 1623, 1636
AlwNI CAGNNNCTG 1 cut(s) 868
Ama87I CYCGRG 1 cut(s) 673
AoxI GGCC 3 cut(s) 631, 746, 887
ApaLI GTGCAC 2 cut(s) 107, 707
ApeKI GCWGC 2 cut(s) 188, 322
ArsI GACNNNNNNTTYG 4 cut(s) 86, 118, 1289, 1321
Asp718I GGTACC 1 cut(s) 611
AspLEI GCGC 3 cut(s) 322, 1862, 1864
AspS9I GGNCC 4 cut(s) 887, 1212, 1250, 1368
AsuC2I CCSGG 5 cut(s) 175, 317, 397, 735, 891
AsuHPI GGTGA 4 cut(s) 256, 322, 676, 984
AsuII TTCGAA 1 cut(s) 1403
AsuNHI GCTAGC 1 cut(s) 1064
AvaI CYCGRG 1 cut(s) 673
AvaII GGWCC 3 cut(s) 1212, 1250, 1368
BaeGI GKGCMC 3 cut(s) 111, 364, 711
BaeI ACNNNNGTAYC 2 cut(s) 588, 621
BamHI GGATCC 2 cut(s) 1288, 1628
BanI GGYRCC 2 cut(s) 611, 792
BarI GAAGNNNNNNTAC 2 cut(s) 1397, 1429
BbsI GAAGAC 1 cut(s) 1486
Bbv12I GWGCWC 2 cut(s) 111, 711
BbvCI CCTCAGC 2 cut(s) 861, 1277
BbvI GCAGC 2 cut(s) 175, 334
BccI CCATC 7 cut(s) 6, 335, 530, 906, 916, 1619, 1850
BceAI ACGGC 4 cut(s) 220, 586, 922, 928
BciT130I CCWGG 3 cut(s) 227, 1286, 1650
BclI TGATCA 1 cut(s) 1383
BcnI CCSGG 5 cut(s) 175, 317, 397, 735, 891
BcoDI GTCTC 3 cut(s) 309, 515, 1017
BfaI CTAG 4 cut(s) 131, 185, 1065, 1271
BfmI CTRYAG 1 cut(s) 1668
BisI GCNGC 6 cut(s) 163, 189, 323, 376, 379, 648
BlpI GCTNAGC 1 cut(s) 382
BlsI GCNGC 6 cut(s) 164, 190, 324, 377, 380, 649
Bme1390I CCNGG 8 cut(s) 175, 227, 317, 397, 735, 891, 1286, 1650
Bme18I GGWCC 3 cut(s) 1212, 1250, 1368
BmeT110I CYCGRG 1 cut(s) 673
BmgT120I GGNCC 4 cut(s) 887, 1212, 1250, 1368
BmiI GGNNCC 9 cut(s) 126, 446, 613, 794, 1213, 1214, 1283, 1290, 1630
BmrFI CCNGG 8 cut(s) 175, 227, 317, 397, 735, 891, 1286, 1650
BmsI GCATC 6 cut(s) 375, 766, 861, 1413, 1440, 1668
BmtI GCTAGC 1 cut(s) 1068
BpiI GAAGAC 1 cut(s) 1486
BpmI CTGGAG 6 cut(s) 54, 75, 864, 1243, 1245, 1632
Bpu10I CCTNAGC 2 cut(s) 861, 1277
Bpu1102I GCTNAGC 1 cut(s) 382
Bpu14I TTCGAA 1 cut(s) 1403
BpuEI CTTGAG 4 cut(s) 680, 735, 1363, 1647
BpuMI CCSGG 5 cut(s) 175, 317, 397, 735, 891
BsaBI GATNNNNATC 2 cut(s) 1427, 1809
BsaJI CCNNGG 5 cut(s) 315, 336, 370, 648, 1503
BsaXI ACNNNNNCTCC 2 cut(s) 109, 139
Bsc4I CCNNNNNNNGG 3 cut(s) 454, 569, 944
Bse118I RCCGGY 1 cut(s) 1000
Bse8I GATNNNNATC 2 cut(s) 1427, 1809
BseBI CCWGG 3 cut(s) 227, 1286, 1650
BseDI CCNNGG 5 cut(s) 315, 336, 370, 648, 1503
BseGI GGATG 4 cut(s) 57, 346, 366, 1230
BseJI GATNNNNATC 2 cut(s) 1427, 1809
BseLI CCNNNNNNNGG 3 cut(s) 454, 569, 944
BseMII CTCAG 4 cut(s) 396, 875, 1208, 1268
BsePI GCGCGC 1 cut(s) 1860
BseRI GAGGAG 2 cut(s) 971, 1360
BseSI GKGCMC 3 cut(s) 111, 364, 711
BseXI GCAGC 2 cut(s) 175, 334
Bsh1236I CGCG 4 cut(s) 409, 650, 1862, 1864
BshFI GGCC 3 cut(s) 633, 748, 889
BshNI GGYRCC 2 cut(s) 611, 792
BsiHKAI GWGCWC 2 cut(s) 111, 711
BsiHKCI CYCGRG 1 cut(s) 673
BsiSI CCGG 6 cut(s) 174, 317, 396, 735, 890, 1001
BslFI GGGAC 1 cut(s) 1225
BslI CCNNNNNNNGG 3 cut(s) 454, 569, 944
BsmAI GTCTC 3 cut(s) 309, 515, 1017
BsmFI GGGAC 1 cut(s) 1225
BsmI GAATGC 3 cut(s) 729, 915, 1353
BsnI GGCC 3 cut(s) 633, 748, 889
BsoBI CYCGRG 1 cut(s) 673
Bsp119I TTCGAA 1 cut(s) 1403
Bsp1286I GDGCHC 3 cut(s) 111, 364, 711
Bsp143I GATC 7 cut(s) 23, 931, 1288, 1383, 1628, 1819, 1837
Bsp1720I GCTNAGC 1 cut(s) 382
BspANI GGCC 3 cut(s) 633, 748, 889
BspCNI CTCAG 4 cut(s) 395, 874, 1209, 1269
BspFNI CGCG 4 cut(s) 409, 650, 1862, 1864
BspHI TCATGA 3 cut(s) 1674, 1713, 1797
BspLI GGNNCC 9 cut(s) 126, 446, 613, 794, 1213, 1214, 1283, 1290, 1630
BspOI GCTAGC 1 cut(s) 1068
BspPI GGATC 5 cut(s) 939, 1283, 1296, 1623, 1636
BspT104I TTCGAA 1 cut(s) 1403
BspT107I GGYRCC 2 cut(s) 611, 792
BsrBI CCGCTC 1 cut(s) 1255
BsrFI RCCGGY 1 cut(s) 1000
BssAI RCCGGY 1 cut(s) 1000
BssECI CCNNGG 5 cut(s) 315, 336, 370, 648, 1503
BssHII GCGCGC 1 cut(s) 1860
BssMI GATC 7 cut(s) 23, 931, 1288, 1383, 1628, 1819, 1837
BssNAI GTATAC 1 cut(s) 1696
BssT1I CCWWGG 2 cut(s) 370, 1503
Bst1107I GTATAC 1 cut(s) 1696
Bst2UI CCWGG 3 cut(s) 227, 1286, 1650
Bst4CI ACNGT 7 cut(s) 596, 688, 812, 1192, 1528, 1672, 1727
Bst6I CTCTTC 1 cut(s) 1820
BstBI TTCGAA 1 cut(s) 1403
BstDSI CCRYGG 1 cut(s) 648
BstEII GGTNACC 1 cut(s) 893
BstF5I GGATG 4 cut(s) 57, 346, 366, 1230
BstFNI CGCG 4 cut(s) 409, 650, 1862, 1864
BstHHI GCGC 3 cut(s) 322, 1862, 1864
BstKTI GATC 7 cut(s) 26, 934, 1291, 1386, 1631, 1822, 1840
BstMAI GTCTC 3 cut(s) 309, 515, 1017
BstMBI GATC 7 cut(s) 23, 931, 1288, 1383, 1628, 1819, 1837
BstMWI GCNNNNNNNGC 7 cut(s) 122, 372, 392, 871, 1074, 1459, 1687
BstNI CCWGG 3 cut(s) 227, 1286, 1650
BstNSI RCATGY 3 cut(s) 701, 1487, 1709
BstPI GGTNACC 1 cut(s) 893
BstSCI CCNGG 8 cut(s) 173, 225, 315, 395, 733, 889, 1284, 1648
BstSFI CTRYAG 1 cut(s) 1668
BstSLI GKGCMC 3 cut(s) 111, 364, 711
BstUI CGCG 4 cut(s) 409, 650, 1862, 1864
BstV1I GCAGC 2 cut(s) 175, 334
BstV2I GAAGAC 1 cut(s) 1486
BstX2I RGATCY 2 cut(s) 1288, 1628
BstYI RGATCY 2 cut(s) 1288, 1628
BstZ17I GTATAC 1 cut(s) 1696
BsuRI GGCC 3 cut(s) 633, 748, 889
BtgI CCRYGG 1 cut(s) 648
BtsCI GGATG 4 cut(s) 57, 346, 366, 1230
BtsIMutI CAGTG 3 cut(s) 817, 1384, 1533
CaiI CAGNNNCTG 1 cut(s) 868
CciI TCATGA 3 cut(s) 1674, 1713, 1797
CfoI GCGC 3 cut(s) 322, 1862, 1864
Cfr10I RCCGGY 1 cut(s) 1000
Cfr13I GGNCC 4 cut(s) 887, 1212, 1250, 1368
Cfr42I CCGCGG 1 cut(s) 651
CseI GACGC 2 cut(s) 218, 735
Csp6I GTAC 6 cut(s) 168, 597, 612, 1160, 1588, 1844
CviAII CATG 8 cut(s) 508, 698, 1484, 1550, 1675, 1706, 1714, 1798
CviQI GTAC 6 cut(s) 168, 597, 612, 1160, 1588, 1844
DpnI GATC 7 cut(s) 25, 933, 1290, 1385, 1630, 1821, 1839
DpnII GATC 7 cut(s) 23, 931, 1288, 1383, 1628, 1819, 1837
DrdI GACNNNNNNGTC 1 cut(s) 215
DseDI GACNNNNNNGTC 1 cut(s) 215
Eam1104I CTCTTC 1 cut(s) 1820
EarI CTCTTC 1 cut(s) 1820
Eco130I CCWWGG 2 cut(s) 370, 1503
Eco147I AGGCCT 1 cut(s) 748
Eco47I GGWCC 3 cut(s) 1212, 1250, 1368
Eco57I CTGAAG 1 cut(s) 887
Eco88I CYCGRG 1 cut(s) 673
Eco91I GGTNACC 1 cut(s) 893
EcoO109I RGGNCCY 1 cut(s) 1212
EcoO65I GGTNACC 1 cut(s) 893
EcoRII CCWGG 3 cut(s) 225, 1284, 1648
EcoT14I CCWWGG 2 cut(s) 370, 1503
ErhI CCWWGG 2 cut(s) 370, 1503
FaeI CATG 8 cut(s) 511, 701, 1487, 1553, 1678, 1709, 1717, 1801
FaqI GGGAC 1 cut(s) 1225
FatI CATG 8 cut(s) 507, 697, 1483, 1549, 1674, 1705, 1713, 1797
FauI CCCGC 1 cut(s) 430
FauNDI CATATG 1 cut(s) 1538
FbaI TGATCA 1 cut(s) 1383
FblI GTMKAC 4 cut(s) 348, 690, 1185, 1695
Fnu4HI GCNGC 6 cut(s) 163, 189, 323, 376, 379, 648
FokI GGATG 4 cut(s) 64, 353, 353, 1217
Fsp4HI GCNGC 6 cut(s) 163, 189, 323, 376, 379, 648
FspBI CTAG 4 cut(s) 131, 185, 1065, 1271
GlaI GCGC 3 cut(s) 321, 1861, 1863
GluI GCNGC 6 cut(s) 163, 189, 323, 376, 379, 648
GsuI CTGGAG 6 cut(s) 54, 75, 864, 1243, 1245, 1632
HaeIII GGCC 3 cut(s) 633, 748, 889
HapII CCGG 6 cut(s) 174, 317, 396, 735, 890, 1001
HgaI GACGC 2 cut(s) 218, 735
HhaI GCGC 3 cut(s) 322, 1862, 1864
Hin1II CATG 8 cut(s) 511, 701, 1487, 1553, 1678, 1709, 1717, 1801
Hin6I GCGC 3 cut(s) 320, 1860, 1862
HinP1I GCGC 3 cut(s) 320, 1860, 1862
HindIII AAGCTT 2 cut(s) 753, 798
HinfI GANTC 4 cut(s) 856, 1227, 1607, 1645
HpaII CCGG 6 cut(s) 174, 317, 396, 735, 890, 1001
HphI GGTGA 4 cut(s) 256, 322, 676, 984
Hpy166II GTNNAC 9 cut(s) 109, 349, 691, 709, 1186, 1195, 1207, 1579, 1696
Hpy188I TCNGA 8 cut(s) 11, 337, 554, 608, 906, 921, 1644, 1824
Hpy8I GTNNAC 9 cut(s) 109, 349, 691, 709, 1186, 1195, 1207, 1579, 1696
Hpy99I CGWCG 3 cut(s) 124, 212, 1869
HpyAV CCTTC 6 cut(s) 337, 589, 623, 732, 1052, 1060
HpyCH4III ACNGT 7 cut(s) 596, 688, 812, 1192, 1528, 1672, 1727
HpyCH4IV ACGT 4 cut(s) 119, 232, 975, 1867
HpyCH4V TGCA 8 cut(s) 109, 356, 668, 697, 709, 779, 1353, 1518
HpyF10VI GCNNNNNNNGC 7 cut(s) 122, 372, 392, 871, 1074, 1459, 1687
HpySE526I ACGT 4 cut(s) 119, 232, 975, 1867
Hsp92II CATG 8 cut(s) 511, 701, 1487, 1553, 1678, 1709, 1717, 1801
HspAI GCGC 3 cut(s) 320, 1860, 1862
KflI GGGWCCC 1 cut(s) 1212
KpnI GGTACC 1 cut(s) 615
Ksp22I TGATCA 1 cut(s) 1383
KspI CCGCGG 1 cut(s) 651
Kzo9I GATC 7 cut(s) 23, 931, 1288, 1383, 1628, 1819, 1837
LmnI GCTCC 6 cut(s) 35, 94, 130, 845, 1061, 1507
Lsp1109I GCAGC 2 cut(s) 175, 334
LweI GCATC 6 cut(s) 375, 766, 861, 1413, 1440, 1668
MaeI CTAG 4 cut(s) 131, 185, 1065, 1271
MaeII ACGT 4 cut(s) 119, 232, 975, 1867
MaeIII GTNAC 5 cut(s) 812, 893, 990, 1309, 1412
MalI GATC 7 cut(s) 25, 933, 1290, 1385, 1630, 1821, 1839
MbiI CCGCTC 1 cut(s) 1255
MboI GATC 7 cut(s) 23, 931, 1288, 1383, 1628, 1819, 1837
MflI RGATCY 2 cut(s) 1288, 1628
MhlI GDGCHC 3 cut(s) 111, 364, 711
MluCI AATT 6 cut(s) 153, 1138, 1387, 1511, 1753, 1833
MlyI GAGTC 3 cut(s) 865, 1236, 1639
MmeI TCCRAC 3 cut(s) 492, 532, 586
MseI TTAA 3 cut(s) 836, 1443, 1467
MslI CAYNNNNRTG 4 cut(s) 104, 920, 1529, 1548
MspA1I CMGCKG 3 cut(s) 386, 650, 842
MspI CCGG 6 cut(s) 174, 317, 396, 735, 890, 1001
MspR9I CCNGG 8 cut(s) 175, 227, 317, 397, 735, 891, 1286, 1650
Mva1269I GAATGC 3 cut(s) 729, 915, 1353
MvaI CCWGG 3 cut(s) 227, 1286, 1650
MvnI CGCG 4 cut(s) 409, 650, 1862, 1864
MwoI GCNNNNNNNGC 7 cut(s) 122, 372, 392, 871, 1074, 1459, 1687
NciI CCSGG 5 cut(s) 175, 317, 397, 735, 891
NdeI CATATG 1 cut(s) 1538
NdeII GATC 7 cut(s) 23, 931, 1288, 1383, 1628, 1819, 1837
NheI GCTAGC 1 cut(s) 1064
NlaIII CATG 8 cut(s) 511, 701, 1487, 1553, 1678, 1709, 1717, 1801
NlaIV GGNNCC 9 cut(s) 126, 446, 613, 794, 1213, 1214, 1283, 1290, 1630
NmuCI GTSAC 3 cut(s) 812, 990, 1309
NspI RCATGY 3 cut(s) 701, 1487, 1709
NspV TTCGAA 1 cut(s) 1403
OliI CACNNNNGTG 1 cut(s) 104
PaeI GCATGC 1 cut(s) 701
PagI TCATGA 3 cut(s) 1674, 1713, 1797
PauI GCGCGC 1 cut(s) 1860
PceI AGGCCT 1 cut(s) 748
PctI GAATGC 3 cut(s) 729, 915, 1353
PfeI GAWTC 1 cut(s) 1607
PfoI TCCNGGA 3 cut(s) 225, 733, 1648
PkrI GCNGC 6 cut(s) 164, 190, 324, 377, 380, 649
PleI GAGTC 3 cut(s) 864, 1235, 1639
PpsI GAGTC 3 cut(s) 864, 1235, 1639
PpuMI RGGWCCY 1 cut(s) 1212
Psp5II RGGWCCY 1 cut(s) 1212
Psp6I CCWGG 3 cut(s) 225, 1284, 1648
PspEI GGTNACC 1 cut(s) 893
PspGI CCWGG 3 cut(s) 225, 1284, 1648
PspN4I GGNNCC 9 cut(s) 126, 446, 613, 794, 1213, 1214, 1283, 1290, 1630
PspPI GGNCC 4 cut(s) 887, 1212, 1250, 1368
PspPPI RGGWCCY 1 cut(s) 1212
PstNI CAGNNNCTG 1 cut(s) 868
PsuI RGATCY 2 cut(s) 1288, 1628
PteI GCGCGC 1 cut(s) 1860
PvuII CAGCTG 2 cut(s) 386, 842
RsaI GTAC 6 cut(s) 169, 598, 613, 1161, 1589, 1845
RsaNI GTAC 6 cut(s) 168, 597, 612, 1160, 1588, 1844
RseI CAYNNNNRTG 4 cut(s) 104, 920, 1529, 1548
SacII CCGCGG 1 cut(s) 651
SaqAI TTAA 3 cut(s) 836, 1443, 1467
SatI GCNGC 6 cut(s) 163, 189, 323, 376, 379, 648
Sau3AI GATC 7 cut(s) 23, 931, 1288, 1383, 1628, 1819, 1837
Sau96I GGNCC 4 cut(s) 887, 1212, 1250, 1368
SchI GAGTC 3 cut(s) 865, 1236, 1639
ScrFI CCNGG 8 cut(s) 175, 227, 317, 397, 735, 891, 1286, 1650
SduI GDGCHC 3 cut(s) 111, 364, 711
SfaNI GCATC 6 cut(s) 375, 766, 861, 1413, 1440, 1668
SfcI CTRYAG 1 cut(s) 1668
Sfr303I CCGCGG 1 cut(s) 651
SfuI TTCGAA 1 cut(s) 1403
SgrBI CCGCGG 1 cut(s) 651
SinI GGWCC 3 cut(s) 1212, 1250, 1368
SmiMI CAYNNNNRTG 4 cut(s) 104, 920, 1529, 1548
SmlI CTYRAG 4 cut(s) 659, 750, 1342, 1662
SmoI CTYRAG 4 cut(s) 659, 750, 1342, 1662
SphI GCATGC 1 cut(s) 701
Sse9I AATT 6 cut(s) 153, 1138, 1387, 1511, 1753, 1833
SseBI AGGCCT 1 cut(s) 748
SspMI CTAG 4 cut(s) 131, 185, 1065, 1271
StuI AGGCCT 1 cut(s) 748
StyD4I CCNGG 8 cut(s) 173, 225, 315, 395, 733, 889, 1284, 1648
StyI CCWWGG 2 cut(s) 370, 1503
TaaI ACNGT 7 cut(s) 596, 688, 812, 1192, 1528, 1672, 1727
TaiI ACGT 4 cut(s) 122, 235, 978, 1870
TaqI TCGA 7 cut(s) 459, 621, 1403, 1431, 1815, 1840, 1854
TasI AATT 6 cut(s) 153, 1138, 1387, 1511, 1753, 1833
TatI WGTACW 2 cut(s) 1587, 1843
TauI GCSGC 4 cut(s) 165, 378, 381, 650
TfiI GAWTC 1 cut(s) 1607
Tru1I TTAA 3 cut(s) 836, 1443, 1467
Tru9I TTAA 3 cut(s) 836, 1443, 1467
TscAI CASTG 3 cut(s) 817, 1384, 1533
TseFI GTSAC 3 cut(s) 812, 990, 1309
TseI GCWGC 2 cut(s) 188, 322
Tsp45I GTSAC 3 cut(s) 812, 990, 1309
TspDTI ATGAA 7 cut(s) 486, 986, 1042, 1628, 1730, 1786, 1814
TspGWI ACGGA 3 cut(s) 978, 1293, 1400
TspRI CASTG 3 cut(s) 817, 1384, 1533
VneI GTGCAC 2 cut(s) 107, 707
VpaK11BI GGWCC 3 cut(s) 1212, 1250, 1368
XbaI TCTAGA 1 cut(s) 1270
XceI RCATGY 3 cut(s) 701, 1487, 1709
XmiI GTMKAC 4 cut(s) 348, 690, 1185, 1695
XspI CTAG 4 cut(s) 131, 185, 1065, 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.