FvH4_7g30950

Inorganic phosphate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0001012
Physical Location & Seq
Reverse (-)
22440060 .. 22444671
4612 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g30950.t1

Sequence Viewer

Length: 3132 bp
ATGGCTATAGCCGTGCTGAATGCTTTGGATACTGCTAAAACACAATGGTACCACATGACCGCCATTGTCATTGCCGGAATGGGCTTTTTCACCGACGCCTATGACCTATTCGTCATAACCACCGTTTCGAAACTCCTCGGCCGCCTCTACTATTACGACCCCAGCACAGGAAAGCCGGGAAAGCTCCCGGTAAGCGTCAACAACTTGGTCACCGGAGTTGCCCTAGTTGGAACCCTATCCGGCCAACTATTCTTTGGCTACCTCGGAGACAAGCTTGGCCGCAAGAAAGTGTACGGCATCACCTTGATCATGATGGTCGTCTGCGCCATTTGCTCCGGCCTGTCCTTCGGGTCTACATCGGGTTCTGTGATGACAACCCTTTGTTTCTTTAGGTTTTGGCTTGGTTTCGGCATCGGCGGAGATTATCCCCTCTCCGCCACCATCATGTCTGAATATGCCAACAAAAAAACACGTGGCGCTTTTATAGCGGCGGTGTTTGCCATGCAAGGAGTAGGGATCATCTTTGCAGGGTTGGTTTCCATGACACTCTCGGCAATCTTCCTCCACTATTACGACACTCCTGGATTCAACAAAAACCCTGCCGAGTATTCCGATGTGTTCTCCACCCAACCGGAGGCCGATTATCTGTGGAGGATTGTCCTCATGATCGGAGCTTTGCCGGCTATCGTGACGTTTTACTGGCGGATGAAAATGCCCGAAACGGCTCGTTACACGGCGTTGATCGAAGGAAACGCCAAGCAAGCCGCGAGTGACATGGGTAGTGTTTTAGAGATTGAAATTCAAGCTGAGCAGGACAAGGTGGCGCAGTTCAAAGCTGCAAACGAGTACTCTTTGCTCTCAAAAGAGTTTTTCCGGCGACACGGGAAGCATCTCATCGGAACAACGACGACTTGGTTCTTGCTAGACATTGCATTCTACAGCCAAAACCTTACTCAGAAGGACATTTTCCAAAATATGGGTCTCACTGAGAAACCACAATTTGTCAATGCTCTTAGAGAAGTCTTCCAAACCTCCAGGGCCATGTTTATAGTTGCAATGTTCGGGACCTTCCCTGGTTACTGGTTCACTGTCTTCCTCATCGAGAGACTCGGCCGGTTCAAAATCCAACTCGTCGGGTTTTTCATGATGTCCTTCTTCATGTTCATCATAGGGTTCAAATATATTGAACTCAGGACTCACAAGTACACGTTTGCCACTCTATACGGTTTGACATTCTTCTTCGCCAACTTTGGCCCCAACAGCACCACGTTTGTGCTTCCGGCCGAGTTGTTCCCGACCCGTGTGAGATCCACGTGTCACGCGATTAGCGCGGCGTGCGGGAAGGCCGGTGCGATGGTTGGTGCATTTGGGGTGCAAACCTATACTTTGGATTCCGACCCCAACAAAATTAAGAAGGCTATGTTGTTCTTGGCATTTACCAACATGTTAGGGTTTTGCTTCACGTTTTTGGTCACCGAGACCAAAGGTAGGTCCTTGGAGGAGATCTCTGGTGAGGATGGCGGCAATGGTAGCAATGCACCTAGCAAGCAAGCAAAGCAAAGCAAGATGGCTATAGCTGTACTGGCTGCTCTTGACAATGCTAAAACCCAATGGTACCACATGACAGCCATTGTCATAGCCGGAATGGGCTTCTTTACCGACGCCTATGACCTCTTCTGCATCTCCACCGTTTCTAAGCTCCTCGGCCGGCTTTACTACTACGACCCCAGCAAAGGAGCCCCCGGAAAGCTTCCCCAAGGCATCAACAACTTGGTCGTCGGTGTAGCCCTAGTCGGTACCTTATCCGGCCAACTATTTTTTGGCTACCTTGGTGACAAGCTCGGCCGCAAAAGAGTTTACGGCGTAACCCTCATCATGATGGCTGTATGCGCCATTTGCTCCGGCCTCTCCTTCGGGTCCTCACCAAGCGCTGTGATGACGACACTTTGTTTCTTCAGGTTCTGGCTTGGATTCGGCATTGGCGGAGATTATCCCCTCTCCGCCACCATCATGTCCGAATACGCTAACAAAACAACACGAGGAGCTTTCATAGCGGCGGTGTTTGCCATGCAAGGCGTTGGGATTATCTTCGCCGGTTTGGTTTCGATGACACTCTCAGCAATCTTCCTCAGGCGGTATCCAGCACCAGCATTCAATGCAAACCCTACAGACTATTCTGATGTATTATCCACGCAGCCGGAAGCCGACTTCTTGTGGAGGATTGTCCTCATGCTCGGGGCTCTTCCGGCCGTTGTGACATTCTACTGGCGCATGAAAATGCCCGAAACGGCGCGCTACACGGCGTTGATCGAAGGAAACGCCAAGCAAGCAGCAACCGACATGGGTCATGTTTTAGAGATCGAAATCCAAGCGGAGCAGGACAAGGTGGCGCAGTTCAAGGCTGCAAATGAGTACAAGTTGCTCTCCGGAGAGTTCTTCAGGCGCCATGGAAAGCATCTCATCGGAACAATGACGACTTGGTTCTTGTTGGACATTGCGTTTTACAGCCAAAACTTGACTCAGAAGGACATTTTCCCTGTGATGGGTTTGACTGATAAACCTAAAACGGTCAACGCTCTTATGGAAGTCTTCCAGACCTCTAGGGCAATGTTTGTGGTTGCGTTACTGGGGACGTTCCCTGGTTACTGGTTCACTGTAGCTTTCATTGAAAAGCTCGGACGATACAAGATCCAACTCGTCGGATTCTTCATGATGTCTGTGTTCATGTTCATCATTGGGATCAAATACGAGTGGCTTATAAATAACCCGCCAGTATTTGCTACTCTCTATGGTCTGACATTTTTCTTCGCCAACTTTGGTCCGAACAGCACCACTTTCGTGCTTCCGGCGGAGCTGTTTCCGACGCGGGTGAGGTCTACTTGCCATGCGATTAGTGCGGCGTCCGGGAAGGCTGGTGCGATGGTTGGTGCATTTGGTATACAAAACTTAACTTTGGATGGAAAACCCAAGTCGATTCGAAAGGCTATGATGATTTTGGCGTTTACAAACATGTTAGGGTTTTGTTTCACGTTCATGCTCACTGAGACCAAAGGGCGGTCCTTGGAGGAGATCTCCGGCGAAGATGGTGGCAACGGCGGCAAAAATGAAACACAAATGAGTGATGATGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0016020 GO:0016021 GO:0031224 GO:0031226 GO:0044425 GO:0044459 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sugar_tr

Protein Analysis

1044

Amino Acids

115.21

Weight (kDa)

9.05

Isoelectric Point (pI)

31.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 23 - 503 1.2e-54 Sugar (and other) transporter
MFS_1 PF07690 47 - 455 6.7e-24 Major Facilitator Superfamily
Sugar_tr PF00083 545 - 1025 3.9e-49 Sugar (and other) transporter
MFS_1 PF07690 589 - 977 6.2e-21 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2759
AasI GACNNNNNNGTC 1 cut(s) 110
Acc65I GGTACC 3 cut(s) 48, 1614, 1796
AccB1I GGYRCC 4 cut(s) 48, 1614, 1796, 2442
AccB7I CCANNNNNTGG 1 cut(s) 976
AccI GTMKAC 3 cut(s) 353, 2876, 2938
AccII CGCG 5 cut(s) 767, 1322, 1331, 2293, 2866
AccIII TCCGGA 1 cut(s) 2426
AclWI GGATC 4 cut(s) 524, 1302, 2683, 2747
AcoI YGGCCR 9 cut(s) 139, 241, 277, 1111, 1281, 1705, 1807, 1843, 2247
AcsI RAATTY 1 cut(s) 798
AcuI CTGAAG 2 cut(s) 1939, 2422
AcvI CACGTG 2 cut(s) 473, 1314
AcyI GRCGYC 4 cut(s) 96, 1662, 2443, 2900
AfaI GTAC 8 cut(s) 50, 293, 848, 1205, 1581, 1616, 1798, 2414
AfeI AGCGCT 1 cut(s) 1930
AfiI CCNNNNNNNGG 8 cut(s) 167, 634, 976, 1488, 1733, 2542, 2543, 3054
AflIII ACRYGT 5 cut(s) 470, 1206, 1313, 1443, 3009
AjnI CCWGG 4 cut(s) 580, 1034, 1072, 2638
AleI CACNNNNGTG 2 cut(s) 1271, 2837
Alw26I GTCTC 5 cut(s) 261, 986, 1099, 1472, 3038
AlwI GGATC 4 cut(s) 524, 1302, 2683, 2747
AlwNI CAGNNNCTG 1 cut(s) 1962
Ama87I CYCGRG 1 cut(s) 2234
Aor13HI TCCGGA 1 cut(s) 2426
Aor51HI AGCGCT 1 cut(s) 1930
ApeKI GCWGC 5 cut(s) 836, 1586, 2194, 2330, 2402
ApoI RAATTY 1 cut(s) 798
ArsI GACNNNNNNTTYG 2 cut(s) 964, 996
Asp718I GGTACC 3 cut(s) 48, 1614, 1796
AspS9I GGNCC 7 cut(s) 1038, 1065, 1253, 1491, 1917, 2819, 3057
AsuC2I CCSGG 4 cut(s) 177, 188, 1743, 2905
AsuHPI GGTGA 8 cut(s) 82, 202, 292, 1465, 1523, 1844, 1914, 2881
AsuII TTCGAA 2 cut(s) 128, 2977
AvaI CYCGRG 1 cut(s) 2234
AvaII GGWCC 5 cut(s) 1065, 1491, 1917, 2819, 3057
AxyI CCTNAGG 1 cut(s) 2129
BaeI ACNNNNGTAYC 2 cut(s) 32, 65
BanI GGYRCC 4 cut(s) 48, 1614, 1796, 2442
BanII GRGCYC 2 cut(s) 1741, 2242
BauI CACGAG 1 cut(s) 2037
BbrPI CACGTG 2 cut(s) 473, 1314
BbsI GAAGAC 3 cut(s) 1015, 1084, 2581
BbvI GCAGC 5 cut(s) 823, 1573, 2206, 2342, 2389
BceAI ACGGC 8 cut(s) 310, 738, 750, 1876, 2234, 2304, 2316, 3109
BcgI CGANNNNNNTGC 2 cut(s) 2818, 2852
BciT130I CCWGG 4 cut(s) 582, 1036, 1074, 2640
BciVI GTATCC 2 cut(s) 22, 2148
BclI TGATCA 1 cut(s) 306
BcnI CCSGG 4 cut(s) 177, 188, 1743, 2905
BcoDI GTCTC 5 cut(s) 261, 986, 1099, 1472, 3038
BfaI CTAG 5 cut(s) 224, 923, 1542, 1790, 2601
BfmI CTRYAG 5 cut(s) 6, 937, 1572, 2166, 2655
BfoI RGCGCY 3 cut(s) 480, 1932, 2446
BfuI GTATCC 2 cut(s) 22, 2148
BglII AGATCT 2 cut(s) 1503, 3069
BlpI GCTNAGC 1 cut(s) 807
BmcAI AGTACT 1 cut(s) 848
Bme1390I CCNGG 8 cut(s) 177, 188, 582, 1036, 1074, 1743, 2640, 2905
Bme18I GGWCC 5 cut(s) 1065, 1491, 1917, 2819, 3057
BmeT110I CYCGRG 1 cut(s) 2234
BmgT120I GGNCC 7 cut(s) 1038, 1065, 1253, 1491, 1917, 2819, 3057
BmiI GGNNCC 9 cut(s) 50, 232, 1066, 1255, 1616, 1738, 1798, 1918, 2444
BmrFI CCNGG 8 cut(s) 177, 188, 582, 1036, 1074, 1743, 2640, 2905
BmrI ACTGGG 1 cut(s) 2636
BmsI GCATC 6 cut(s) 306, 420, 898, 1689, 1770, 2464
BmuI ACTGGG 1 cut(s) 2636
BoxI GACNNNNGTC 1 cut(s) 2343
BpiI GAAGAC 3 cut(s) 1015, 1084, 2581
BplI GAGNNNNNCTC 4 cut(s) 1490, 1522, 3056, 3088
BpmI CTGGAG 1 cut(s) 1018
Bpu1102I GCTNAGC 1 cut(s) 807
Bpu14I TTCGAA 2 cut(s) 128, 2977
BpuMI CCSGG 4 cut(s) 177, 188, 1743, 2905
BsaAI YACGTR 2 cut(s) 473, 1314
BsaBI GATNNNNATC 1 cut(s) 2363
BsaHI GRCGYC 4 cut(s) 96, 1662, 2443, 2900
BsaI GGTCTC 3 cut(s) 986, 1472, 3038
BsaWI WCCGGW 3 cut(s) 212, 631, 2426
Bsc4I CCNNNNNNNGG 8 cut(s) 167, 634, 976, 1488, 1733, 2542, 2543, 3054
Bse118I RCCGGY 5 cut(s) 679, 1113, 1346, 1707, 2093
Bse1I ACTGG 7 cut(s) 704, 1085, 1587, 2270, 2631, 2651, 2771
Bse21I CCTNAGG 1 cut(s) 2129
Bse3DI GCAATG 7 cut(s) 69, 927, 1062, 1531, 1540, 2493, 2613
Bse8I GATNNNNATC 1 cut(s) 2363
BseAI TCCGGA 1 cut(s) 2426
BseBI CCWGG 4 cut(s) 582, 1036, 1074, 2640
BseGI GGATG 3 cut(s) 711, 1522, 2962
BseJI GATNNNNATC 1 cut(s) 2363
BseLI CCNNNNNNNGG 8 cut(s) 167, 634, 976, 1488, 1733, 2542, 2543, 3054
BseMI GCAATG 7 cut(s) 69, 927, 1062, 1531, 1540, 2493, 2613
BseMII CTCAG 8 cut(s) 798, 968, 978, 1204, 2130, 2143, 2534, 3033
BseNI ACTGG 7 cut(s) 704, 1085, 1587, 2270, 2631, 2651, 2771
BsePI GCGCGC 1 cut(s) 2291
BseRI GAGGAG 5 cut(s) 125, 1514, 1691, 2055, 3080
BseX3I CGGCCG 6 cut(s) 139, 1111, 1281, 1705, 1843, 2247
BseXI GCAGC 5 cut(s) 823, 1573, 2206, 2342, 2389
BseYI CCCAGC 2 cut(s) 161, 1727
Bsh1236I CGCG 5 cut(s) 767, 1322, 1331, 2293, 2866
Bsh1285I CGRYCG 6 cut(s) 142, 1114, 1284, 1708, 1846, 2250
BshNI GGYRCC 4 cut(s) 48, 1614, 1796, 2442
BsiEI CGRYCG 6 cut(s) 142, 1114, 1284, 1708, 1846, 2250
BsiHKCI CYCGRG 1 cut(s) 2234
BslFI GGGAC 2 cut(s) 1078, 2644
BslI CCNNNNNNNGG 8 cut(s) 167, 634, 976, 1488, 1733, 2542, 2543, 3054
BsmAI GTCTC 5 cut(s) 261, 986, 1099, 1472, 3038
BsmFI GGGAC 2 cut(s) 1078, 2644
BsmI GAATGC 3 cut(s) 25, 932, 2150
Bso31I GGTCTC 3 cut(s) 986, 1472, 3038
BsoBI CYCGRG 1 cut(s) 2234
Bsp119I TTCGAA 2 cut(s) 128, 2977
Bsp1286I GDGCHC 2 cut(s) 1741, 2242
Bsp13I TCCGGA 1 cut(s) 2426
Bsp1720I GCTNAGC 1 cut(s) 807
Bsp19I CCATGG 1 cut(s) 2446
BspCNI CTCAG 8 cut(s) 799, 967, 979, 1203, 2129, 2142, 2533, 3034
BspEI TCCGGA 1 cut(s) 2426
BspFNI CGCG 5 cut(s) 767, 1322, 1331, 2293, 2866
BspHI TCATGA 5 cut(s) 309, 663, 1143, 1875, 2709
BspLI GGNNCC 9 cut(s) 50, 232, 1066, 1255, 1616, 1738, 1798, 1918, 2444
BspPI GGATC 4 cut(s) 524, 1302, 2683, 2747
BspQI GCTCTTC 1 cut(s) 2247
BspT104I TTCGAA 2 cut(s) 128, 2977
BspT107I GGYRCC 4 cut(s) 48, 1614, 1796, 2442
BspTNI GGTCTC 3 cut(s) 986, 1472, 3038
BsrDI GCAATG 7 cut(s) 69, 927, 1062, 1531, 1540, 2493, 2613
BsrFI RCCGGY 5 cut(s) 679, 1113, 1346, 1707, 2093
BsrI ACTGG 7 cut(s) 704, 1085, 1587, 2270, 2631, 2651, 2771
BssAI RCCGGY 5 cut(s) 679, 1113, 1346, 1707, 2093
BssHII GCGCGC 1 cut(s) 2291
BssNAI GTATAC 1 cut(s) 2939
BssNI GRCGYC 4 cut(s) 96, 1662, 2443, 2900
BssSI CACGAG 1 cut(s) 2037
BssT1I CCWWGG 5 cut(s) 1494, 1756, 1828, 2446, 3060
Bst1107I GTATAC 1 cut(s) 2939
Bst2BI CACGAG 1 cut(s) 2037
Bst2UI CCWGG 4 cut(s) 582, 1036, 1074, 2640
Bst4CI ACNGT 6 cut(s) 124, 1090, 1226, 1690, 2569, 2656
Bst6I CTCTTC 2 cut(s) 1679, 2247
BstACI GRCGYC 4 cut(s) 96, 1662, 2443, 2900
BstAPI GCANNNNNTGC 1 cut(s) 2156
BstBAI YACGTR 2 cut(s) 473, 1314
BstBI TTCGAA 2 cut(s) 128, 2977
BstC8I GCNNGC 8 cut(s) 681, 762, 1336, 1547, 1551, 1709, 2293, 2328
BstDSI CCRYGG 1 cut(s) 2446
BstEII GGTNACC 2 cut(s) 208, 1471
BstF5I GGATG 3 cut(s) 711, 1522, 2962
BstFNI CGCG 5 cut(s) 767, 1322, 1331, 2293, 2866
BstH2I RGCGCY 3 cut(s) 480, 1932, 2446
BstMAI GTCTC 5 cut(s) 261, 986, 1099, 1472, 3038
BstMCI CGRYCG 6 cut(s) 142, 1114, 1284, 1708, 1846, 2250
BstNI CCWGG 4 cut(s) 582, 1036, 1074, 2640
BstNSI RCATGY 2 cut(s) 1447, 3013
BstPAI GACNNNNGTC 1 cut(s) 2343
BstPI GGTNACC 2 cut(s) 208, 1471
BstSCI CCNGG 8 cut(s) 175, 186, 580, 1034, 1072, 1741, 2638, 2903
BstSFI CTRYAG 5 cut(s) 6, 937, 1572, 2166, 2655
BstUI CGCG 5 cut(s) 767, 1322, 1331, 2293, 2866
BstV1I GCAGC 5 cut(s) 823, 1573, 2206, 2342, 2389
BstV2I GAAGAC 3 cut(s) 1015, 1084, 2581
BstX2I RGATCY 4 cut(s) 1307, 1503, 2688, 3069
BstYI RGATCY 4 cut(s) 1307, 1503, 2688, 3069
BstZ17I GTATAC 1 cut(s) 2939
BstZI CGGCCG 6 cut(s) 139, 1111, 1281, 1705, 1843, 2247
Bsu36I CCTNAGG 1 cut(s) 2129
BsuI GTATCC 2 cut(s) 22, 2148
BtgI CCRYGG 1 cut(s) 2446
BtgZI GCGATG 2 cut(s) 1367, 2933
BtsCI GGATG 3 cut(s) 711, 1522, 2962
BtsIMutI CAGTG 4 cut(s) 984, 1086, 2652, 3039
Cac8I GCNNGC 8 cut(s) 681, 762, 1336, 1547, 1551, 1709, 2293, 2328
CaiI CAGNNNCTG 1 cut(s) 1962
CciI TCATGA 5 cut(s) 309, 663, 1143, 1875, 2709
Cfr10I RCCGGY 5 cut(s) 679, 1113, 1346, 1707, 2093
Cfr13I GGNCC 7 cut(s) 1038, 1065, 1253, 1491, 1917, 2819, 3057
CseI GACGC 5 cut(s) 104, 184, 1670, 2872, 2889
Csp6I GTAC 8 cut(s) 49, 292, 847, 1204, 1580, 1615, 1797, 2413
CspCI CAANNNNNGTGG 2 cut(s) 2595, 2630
CviQI GTAC 8 cut(s) 49, 292, 847, 1204, 1580, 1615, 1797, 2413
DinI GGCGCC 1 cut(s) 2444
DrdI GACNNNNNNGTC 1 cut(s) 110
DseDI GACNNNNNNGTC 1 cut(s) 110
EaeI YGGCCR 9 cut(s) 139, 241, 277, 1111, 1281, 1705, 1807, 1843, 2247
EagI CGGCCG 6 cut(s) 139, 1111, 1281, 1705, 1843, 2247
Eam1104I CTCTTC 2 cut(s) 1679, 2247
EarI CTCTTC 2 cut(s) 1679, 2247
EciI GGCGGA 6 cut(s) 424, 432, 718, 1990, 1998, 2864
EclXI CGGCCG 6 cut(s) 139, 1111, 1281, 1705, 1843, 2247
Eco130I CCWWGG 5 cut(s) 1494, 1756, 1828, 2446, 3060
Eco24I GRGCYC 2 cut(s) 1741, 2242
Eco31I GGTCTC 3 cut(s) 986, 1472, 3038
Eco47I GGWCC 5 cut(s) 1065, 1491, 1917, 2819, 3057
Eco47III AGCGCT 1 cut(s) 1930
Eco52I CGGCCG 6 cut(s) 139, 1111, 1281, 1705, 1843, 2247
Eco57I CTGAAG 2 cut(s) 1939, 2422
Eco72I CACGTG 2 cut(s) 473, 1314
Eco81I CCTNAGG 1 cut(s) 2129
Eco88I CYCGRG 1 cut(s) 2234
Eco91I GGTNACC 2 cut(s) 208, 1471
EcoO109I RGGNCCY 3 cut(s) 1065, 1491, 1917
EcoO65I GGTNACC 2 cut(s) 208, 1471
EcoRII CCWGG 4 cut(s) 580, 1034, 1072, 2638
EcoT14I CCWWGG 5 cut(s) 1494, 1756, 1828, 2446, 3060
EcoT38I GRGCYC 2 cut(s) 1741, 2242
EgeI GGCGCC 1 cut(s) 2444
EheI GGCGCC 1 cut(s) 2444
ErhI CCWWGG 5 cut(s) 1494, 1756, 1828, 2446, 3060
FaqI GGGAC 2 cut(s) 1078, 2644
FauI CCCGC 3 cut(s) 1331, 2775, 2859
FbaI TGATCA 1 cut(s) 306
FblI GTMKAC 3 cut(s) 353, 2876, 2938
FokI GGATG 3 cut(s) 718, 1529, 2969
FriOI GRGCYC 2 cut(s) 1741, 2242
FspBI CTAG 5 cut(s) 224, 923, 1542, 1790, 2601
GsaI CCCAGC 2 cut(s) 165, 1731
GsuI CTGGAG 1 cut(s) 1018
HaeII RGCGCY 3 cut(s) 480, 1932, 2446
HgaI GACGC 5 cut(s) 104, 184, 1670, 2872, 2889
Hin1I GRCGYC 4 cut(s) 96, 1662, 2443, 2900
HincII GTYRAC 2 cut(s) 199, 2572
HindII GTYRAC 2 cut(s) 199, 2572
HindIII AAGCTT 2 cut(s) 272, 1748
HinfI GANTC 8 cut(s) 585, 1107, 1195, 1391, 1971, 2518, 2703, 2974
HphI GGTGA 8 cut(s) 82, 202, 292, 1465, 1523, 1844, 1914, 2881
Hpy99I CGWCG 7 cut(s) 98, 910, 1136, 1664, 1781, 2702, 2866
HpyCH4III ACNGT 6 cut(s) 124, 1090, 1226, 1690, 2569, 2656
HpyCH4IV ACGT 8 cut(s) 472, 692, 1208, 1268, 1313, 1463, 2633, 3029
HpySE526I ACGT 8 cut(s) 472, 692, 1208, 1268, 1313, 1463, 2633, 3029
Hsp92I GRCGYC 4 cut(s) 96, 1662, 2443, 2900
KasI GGCGCC 1 cut(s) 2442
Kpn2I TCCGGA 1 cut(s) 2426
KpnI GGTACC 3 cut(s) 52, 1618, 1800
KroI GCCGGC 2 cut(s) 679, 1707
KroNI GCCGGC 2 cut(s) 681, 1709
Ksp22I TGATCA 1 cut(s) 306
LguI GCTCTTC 1 cut(s) 2247
LmnI GCTCC 9 cut(s) 189, 338, 671, 1704, 1736, 1904, 2042, 2374, 2851
Lsp1109I GCAGC 5 cut(s) 823, 1573, 2206, 2342, 2389
LweI GCATC 6 cut(s) 306, 420, 898, 1689, 1770, 2464
MaeI CTAG 5 cut(s) 224, 923, 1542, 1790, 2601
MaeII ACGT 8 cut(s) 472, 692, 1208, 1268, 1313, 1463, 2633, 3029
MflI RGATCY 4 cut(s) 1307, 1503, 2688, 3069
MhlI GDGCHC 2 cut(s) 1741, 2242
MluCI AATT 3 cut(s) 798, 998, 1407
Mly113I GGCGCC 1 cut(s) 2443
MlyI GAGTC 3 cut(s) 1101, 1189, 2512
MmeI TCCRAC 7 cut(s) 208, 1150, 1419, 2469, 2680, 2716, 2885
MroI TCCGGA 1 cut(s) 2426
MroNI GCCGGC 2 cut(s) 679, 1707
MseI TTAA 2 cut(s) 1410, 2948
MslI CAYNNNNRTG 7 cut(s) 443, 1271, 1877, 2009, 2276, 2837, 3032
MspR9I CCNGG 8 cut(s) 177, 188, 582, 1036, 1074, 1743, 2640, 2905
Mva1269I GAATGC 3 cut(s) 25, 932, 2150
MvaI CCWGG 4 cut(s) 582, 1036, 1074, 2640
MvnI CGCG 5 cut(s) 767, 1322, 1331, 2293, 2866
NaeI GCCGGC 2 cut(s) 681, 1709
NarI GGCGCC 1 cut(s) 2443
NciI CCSGG 4 cut(s) 177, 188, 1743, 2905
NcoI CCATGG 1 cut(s) 2446
NgoMIV GCCGGC 2 cut(s) 679, 1707
NlaIV GGNNCC 9 cut(s) 50, 232, 1066, 1255, 1616, 1738, 1798, 1918, 2444
NmeAIII GCCGAG 7 cut(s) 117, 530, 628, 1089, 1309, 1683, 1821
NmuCI GTSAC 7 cut(s) 208, 688, 770, 1316, 1471, 1832, 2254
NspI RCATGY 2 cut(s) 1447, 3013
NspV TTCGAA 2 cut(s) 128, 2977
OliI CACNNNNGTG 2 cut(s) 1271, 2837
PagI TCATGA 5 cut(s) 309, 663, 1143, 1875, 2709
PauI GCGCGC 1 cut(s) 2291
PciI ACATGT 2 cut(s) 1443, 3009
PciSI GCTCTTC 1 cut(s) 2247
PcsI WCGNNNNNNNCGW 1 cut(s) 1319
PctI GAATGC 3 cut(s) 25, 932, 2150
PdiI GCCGGC 2 cut(s) 681, 1709
PfeI GAWTC 5 cut(s) 585, 1391, 1971, 2703, 2974
PflMI CCANNNNNTGG 1 cut(s) 976
PfoI TCCNGGA 2 cut(s) 580, 2903
PleI GAGTC 3 cut(s) 1101, 1189, 2512
PluTI GGCGCC 1 cut(s) 2446
PmaCI CACGTG 2 cut(s) 473, 1314
PmlI CACGTG 2 cut(s) 473, 1314
PpsI GAGTC 3 cut(s) 1101, 1189, 2512
Ppu21I YACGTR 2 cut(s) 473, 1314
PpuMI RGGWCCY 3 cut(s) 1065, 1491, 1917
PscI ACATGT 2 cut(s) 1443, 3009
PshAI GACNNNNGTC 1 cut(s) 2343
PsiI TTATAA 1 cut(s) 2759
Psp5II RGGWCCY 3 cut(s) 1065, 1491, 1917
Psp6I CCWGG 4 cut(s) 580, 1034, 1072, 2638
PspCI CACGTG 2 cut(s) 473, 1314
PspEI GGTNACC 2 cut(s) 208, 1471
PspFI CCCAGC 2 cut(s) 161, 1727
PspGI CCWGG 4 cut(s) 580, 1034, 1072, 2638
PspN4I GGNNCC 9 cut(s) 50, 232, 1066, 1255, 1616, 1738, 1798, 1918, 2444
PspPI GGNCC 7 cut(s) 1038, 1065, 1253, 1491, 1917, 2819, 3057
PspPPI RGGWCCY 3 cut(s) 1065, 1491, 1917
PstNI CAGNNNCTG 1 cut(s) 1962
PsuI RGATCY 4 cut(s) 1307, 1503, 2688, 3069
PteI GCGCGC 1 cut(s) 2291
RsaI GTAC 8 cut(s) 50, 293, 848, 1205, 1581, 1616, 1798, 2414
RsaNI GTAC 8 cut(s) 49, 292, 847, 1204, 1580, 1615, 1797, 2413
RseI CAYNNNNRTG 7 cut(s) 443, 1271, 1877, 2009, 2276, 2837, 3032
SapI GCTCTTC 1 cut(s) 2247
SaqAI TTAA 2 cut(s) 1410, 2948
Sau96I GGNCC 7 cut(s) 1038, 1065, 1253, 1491, 1917, 2819, 3057
ScaI AGTACT 1 cut(s) 848
SchI GAGTC 3 cut(s) 1101, 1189, 2512
ScrFI CCNGG 8 cut(s) 177, 188, 582, 1036, 1074, 1743, 2640, 2905
SduI GDGCHC 2 cut(s) 1741, 2242
SfaNI GCATC 6 cut(s) 306, 420, 898, 1689, 1770, 2464
SfcI CTRYAG 5 cut(s) 6, 937, 1572, 2166, 2655
SfoI GGCGCC 1 cut(s) 2444
SfuI TTCGAA 2 cut(s) 128, 2977
SinI GGWCC 5 cut(s) 1065, 1491, 1917, 2819, 3057
SmiMI CAYNNNNRTG 7 cut(s) 443, 1271, 1877, 2009, 2276, 2837, 3032
Sse9I AATT 3 cut(s) 798, 998, 1407
SspDI GGCGCC 1 cut(s) 2442
SspMI CTAG 5 cut(s) 224, 923, 1542, 1790, 2601
StyD4I CCNGG 8 cut(s) 175, 186, 580, 1034, 1072, 1741, 2638, 2903
StyI CCWWGG 5 cut(s) 1494, 1756, 1828, 2446, 3060
TaaI ACNGT 6 cut(s) 124, 1090, 1226, 1690, 2569, 2656
TaiI ACGT 8 cut(s) 475, 695, 1211, 1271, 1316, 1466, 2636, 3032
TaqI TCGA 8 cut(s) 128, 744, 1101, 2105, 2310, 2361, 2972, 2977
TasI AATT 3 cut(s) 798, 998, 1407
TatI WGTACW 4 cut(s) 846, 1203, 1579, 2412
TfiI GAWTC 5 cut(s) 585, 1391, 1971, 2703, 2974
Tru1I TTAA 2 cut(s) 1410, 2948
Tru9I TTAA 2 cut(s) 1410, 2948
TscAI CASTG 4 cut(s) 991, 1093, 2659, 3046
TseFI GTSAC 7 cut(s) 208, 688, 770, 1316, 1471, 1832, 2254
TseI GCWGC 5 cut(s) 836, 1586, 2194, 2330, 2402
Tsp45I GTSAC 7 cut(s) 208, 688, 770, 1316, 1471, 1832, 2254
TspRI CASTG 4 cut(s) 991, 1093, 2659, 3046
Van91I CCANNNNNTGG 1 cut(s) 976
VpaK11BI GGWCC 5 cut(s) 1065, 1491, 1917, 2819, 3057
XapI RAATTY 1 cut(s) 798
XceI RCATGY 2 cut(s) 1447, 3013
XcmI CCANNNNNNNNNTGG 2 cut(s) 251, 1817
XmiI GTMKAC 3 cut(s) 353, 2876, 2938
XspI CTAG 5 cut(s) 224, 923, 1542, 1790, 2601
ZrmI AGTACT 1 cut(s) 848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.