Rmu_co8418539.1_g000001

Inorganic phosphate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8418539.1
OG0001012
Physical Location & Seq
Reverse (-)
2 .. 1353
1352 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8418539.1_g000001.1.cds

Sequence Viewer

Length: 1352 bp
atggccatagccgtactggatgctctggacaatgctcgaacgcaatggtaccacatgacagccattgtcatagccggaatgggcttctttaccgacgcctatgacctcttctgtatctccaccgtttctaagctcctaggccggctttactactacgaccccaaaacaggagcccccggaaagcttccccaaaacatcaacaacttggtgaccggagttgccctagtcggaaccctatcgggccaactattcttcggctaccttggggacaagcttggccgcaagagagtgtacggcatcaccctcatcatgatggtcttctgcgccatttgctccggcctctccttcgggtccacaccaagcgccgtaatgacaaccctttgtttctttaggttttggcttggattcggcattggcggagattatcccctctctgccacaatcatgtccgaatatgccaacaaatcaacacgcggcgctttcatagcggcggtgtttgccatgcaaggagtggggattatctttgccggtttggtttccatgacactctcggcaatcttccttagtcgttaccctgcaccagcattcgatgcaaaccctaaagactattctgacgtgttatccacgcaaccggaggcggacttcttgtggaggattgtcctcatgatcggggctgtgccagccattgtcacgttctactggcgcatgaaaatgcccgaaacggctcgctacactgccttgatcgaaggaaacgccaagcaagccgcgagcgatatgggtaatgttttggatatcgaaatcagagccgagcaggacaaggtggcgcagttcaaagcagcaaacgagtacactttgctatccggagagttcttcaggcggcacgggaaacatctcatcggaacgatgacgacttggttcttgttggacattgcgttttacagccaaaacttgactcaaaaggacattttccctgcgatgggtttgactgacccagctaaaaaggtcaacgctcttatggaagtcttccaaacctctagggccatgtttgtggttgcgttactagggacattccctggttactggttcaccgtggctttcatcgaaaagctcggaagattcaggatccaactcgtcgggttcttcatgatgtctgtgttcatgctcatcattggcttcaaatacgcgtggctaaaagatcacccagcaatatttgcaactctctatggtctgacattttttttcgccaactttggtccgaacagcacaactttcgtgcttccagccgagctgtttccgacgagggtgaggtccacgtgccatgcgataagtgcagcgtccgggaaggctggggc
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0016020 GO:0016021 GO:0031224 GO:0031226 GO:0044425 GO:0044459 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sugar_tr

Protein Analysis

451

Amino Acids

49.78

Weight (kDa)

9.11

Isoelectric Point (pI)

29.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 48
AccB1I GGYRCC 1 cut(s) 48
AccII CGCG 3 cut(s) 474, 767, 1184
AccIII TCCGGA 1 cut(s) 860
AciI CCGC 8 cut(s) 280, 417, 474, 488, 491, 638, 765, 877
AclWI GGATC 2 cut(s) 1117, 1130
AcoI YGGCCR 2 cut(s) 3, 277
AcuI CTGAAG 1 cut(s) 856
AcvI CACGTG 1 cut(s) 1314
AcyI GRCGYC 1 cut(s) 96
AfaI GTAC 4 cut(s) 15, 50, 293, 848
AfiI CCNNNNNNNGG 3 cut(s) 167, 976, 977
AflIII ACRYGT 2 cut(s) 615, 1182
AgsI TTSAA 2 cut(s) 832, 1177
AjiI CACGTC 1 cut(s) 616
AjnI CCWGG 1 cut(s) 1072
AluBI AGCT 6 cut(s) 133, 184, 274, 995, 1108, 1288
AluI AGCT 6 cut(s) 133, 184, 274, 995, 1108, 1288
AlwI GGATC 2 cut(s) 1117, 1130
Aor13HI TCCGGA 1 cut(s) 860
AoxI GGCC 6 cut(s) 3, 139, 241, 277, 337, 1038
ApeKI GCWGC 2 cut(s) 836, 1331
Asp718I GGTACC 1 cut(s) 48
AspA2I CCTAGG 1 cut(s) 136
AspLEI GCGC 5 cut(s) 326, 365, 479, 705, 826
AspS9I GGNCC 5 cut(s) 241, 351, 1038, 1253, 1308
AsuC2I CCSGG 2 cut(s) 177, 1339
AsuHPI GGTGA 5 cut(s) 220, 292, 1078, 1190, 1315
AvaII GGWCC 3 cut(s) 351, 1253, 1308
AvrII CCTAGG 1 cut(s) 136
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1122
BanI GGYRCC 1 cut(s) 48
BanII GRGCYC 1 cut(s) 175
BbrPI CACGTG 1 cut(s) 1314
BbsI GAAGAC 2 cut(s) 310, 1015
BbvI GCAGC 2 cut(s) 848, 1343
BccI CCATC 2 cut(s) 307, 970
BceAI ACGGC 3 cut(s) 310, 350, 738
BcgI CGANNNNNNTGC 2 cut(s) 1252, 1286
BciT130I CCWGG 1 cut(s) 1074
BcnI CCSGG 2 cut(s) 177, 1339
BfaI CTAG 4 cut(s) 137, 224, 1035, 1061
BfoI RGCGCY 2 cut(s) 366, 480
BisI GCNGC 7 cut(s) 280, 475, 489, 765, 837, 878, 1332
BlnI CCTAGG 1 cut(s) 136
BlsI GCNGC 7 cut(s) 281, 476, 490, 766, 838, 879, 1333
Bme1390I CCNGG 3 cut(s) 177, 1074, 1339
Bme18I GGWCC 3 cut(s) 351, 1253, 1308
BmgBI CACGTC 1 cut(s) 616
BmgT120I GGNCC 5 cut(s) 241, 351, 1038, 1253, 1308
BmiI GGNNCC 5 cut(s) 50, 172, 232, 352, 1124
BmrFI CCNGG 3 cut(s) 177, 1074, 1339
BmsI GCATC 3 cut(s) 10, 306, 580
BpiI GAAGAC 2 cut(s) 310, 1015
BpuMI CCSGG 2 cut(s) 177, 1339
BsaAI YACGTR 1 cut(s) 1314
BsaHI GRCGYC 1 cut(s) 96
BsaJI CCNNGG 5 cut(s) 136, 175, 262, 1072, 1089
BsaWI WCCGGW 3 cut(s) 212, 631, 860
Bsc4I CCNNNNNNNGG 3 cut(s) 167, 976, 977
Bse118I RCCGGY 2 cut(s) 141, 527
Bse1I ACTGG 3 cut(s) 21, 704, 1085
Bse3DI GCAATG 2 cut(s) 50, 927
BseAI TCCGGA 1 cut(s) 860
BseBI CCWGG 1 cut(s) 1074
BseDI CCNNGG 5 cut(s) 136, 175, 262, 1072, 1089
BseGI GGATG 1 cut(s) 25
BseLI CCNNNNNNNGG 3 cut(s) 167, 976, 977
BseMI GCAATG 2 cut(s) 50, 927
BseNI ACTGG 3 cut(s) 21, 704, 1085
BseXI GCAGC 2 cut(s) 848, 1343
BseYI CCCAGC 3 cut(s) 991, 1201, 1346
BsgI GTGCAG 2 cut(s) 561, 1350
Bsh1236I CGCG 3 cut(s) 474, 767, 1184
BshFI GGCC 6 cut(s) 5, 141, 243, 279, 339, 1040
BshNI GGYRCC 1 cut(s) 48
BsiSI CCGG 9 cut(s) 75, 142, 177, 213, 336, 528, 632, 861, 1338
BslFI GGGAC 2 cut(s) 281, 1078
BslI CCNNNNNNNGG 3 cut(s) 167, 976, 977
BsmFI GGGAC 2 cut(s) 281, 1078
BsmI GAATGC 1 cut(s) 584
BsnI GGCC 6 cut(s) 5, 141, 243, 279, 339, 1040
Bsp1286I GDGCHC 1 cut(s) 175
Bsp13I TCCGGA 1 cut(s) 860
Bsp143I GATC 4 cut(s) 666, 741, 1122, 1195
BspACI CCGC 8 cut(s) 280, 417, 474, 488, 491, 638, 765, 877
BspANI GGCC 6 cut(s) 5, 141, 243, 279, 339, 1040
BspEI TCCGGA 1 cut(s) 860
BspFNI CGCG 3 cut(s) 474, 767, 1184
BspHI TCATGA 3 cut(s) 309, 663, 1143
BspLI GGNNCC 5 cut(s) 50, 172, 232, 352, 1124
BspPI GGATC 2 cut(s) 1117, 1130
BspT107I GGYRCC 1 cut(s) 48
BsrDI GCAATG 2 cut(s) 50, 927
BsrFI RCCGGY 2 cut(s) 141, 527
BsrI ACTGG 3 cut(s) 21, 704, 1085
BssAI RCCGGY 2 cut(s) 141, 527
BssECI CCNNGG 5 cut(s) 136, 175, 262, 1072, 1089
BssMI GATC 4 cut(s) 666, 741, 1122, 1195
BssNI GRCGYC 1 cut(s) 96
BssT1I CCWWGG 2 cut(s) 136, 262
Bst2UI CCWGG 1 cut(s) 1074
Bst4CI ACNGT 2 cut(s) 124, 1090
Bst6I CTCTTC 1 cut(s) 113
BstACI GRCGYC 1 cut(s) 96
BstAPI GCANNNNNTGC 2 cut(s) 590, 1211
BstBAI YACGTR 1 cut(s) 1314
BstC8I GCNNGC 5 cut(s) 143, 681, 727, 762, 769
BstDEI CTNAG 2 cut(s) 129, 563
BstDSI CCRYGG 1 cut(s) 1089
BstEII GGTNACC 1 cut(s) 208
BstF5I GGATG 1 cut(s) 25
BstFNI CGCG 3 cut(s) 474, 767, 1184
BstH2I RGCGCY 2 cut(s) 366, 480
BstHHI GCGC 5 cut(s) 326, 365, 479, 705, 826
BstKTI GATC 4 cut(s) 669, 744, 1125, 1198
BstMBI GATC 4 cut(s) 666, 741, 1122, 1195
BstMWI GCNNNNNNNGC 8 cut(s) 330, 485, 497, 590, 680, 761, 1211, 1328
BstNI CCWGG 1 cut(s) 1074
BstPI GGTNACC 1 cut(s) 208
BstSCI CCNGG 3 cut(s) 175, 1072, 1337
BstUI CGCG 3 cut(s) 474, 767, 1184
BstV1I GCAGC 2 cut(s) 848, 1343
BstV2I GAAGAC 2 cut(s) 310, 1015
BstX2I RGATCY 1 cut(s) 1122
BstXI CCANNNNNNTGG 1 cut(s) 1048
BstYI RGATCY 1 cut(s) 1122
BsuRI GGCC 6 cut(s) 5, 141, 243, 279, 339, 1040
BtgI CCRYGG 1 cut(s) 1089
BtgZI GCGATG 1 cut(s) 989
BtrI CACGTC 1 cut(s) 616
BtsCI GGATG 1 cut(s) 25
BtsI GCAGTG 1 cut(s) 732
BtsIMutI CAGTG 1 cut(s) 732
Cac8I GCNNGC 5 cut(s) 143, 681, 727, 762, 769
CciI TCATGA 3 cut(s) 309, 663, 1143
CfoI GCGC 5 cut(s) 326, 365, 479, 705, 826
Cfr10I RCCGGY 2 cut(s) 141, 527
Cfr13I GGNCC 5 cut(s) 241, 351, 1038, 1253, 1308
CseI GACGC 2 cut(s) 104, 1323
Csp6I GTAC 4 cut(s) 14, 49, 292, 847
CviQI GTAC 4 cut(s) 14, 49, 292, 847
DdeI CTNAG 2 cut(s) 129, 563
DpnI GATC 4 cut(s) 668, 743, 1124, 1197
DpnII GATC 4 cut(s) 666, 741, 1122, 1195
EaeI YGGCCR 2 cut(s) 3, 277
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
EciI GGCGGA 2 cut(s) 432, 653
Eco130I CCWWGG 2 cut(s) 136, 262
Eco24I GRGCYC 1 cut(s) 175
Eco32I GATATC 1 cut(s) 793
Eco47I GGWCC 3 cut(s) 351, 1253, 1308
Eco57I CTGAAG 1 cut(s) 856
Eco72I CACGTG 1 cut(s) 1314
Eco91I GGTNACC 1 cut(s) 208
EcoO65I GGTNACC 1 cut(s) 208
EcoRII CCWGG 1 cut(s) 1072
EcoRV GATATC 1 cut(s) 793
EcoT14I CCWWGG 2 cut(s) 136, 262
EcoT38I GRGCYC 1 cut(s) 175
ErhI CCWWGG 2 cut(s) 136, 262
FaqI GGGAC 2 cut(s) 281, 1078
Fnu4HI GCNGC 7 cut(s) 280, 475, 489, 765, 837, 878, 1332
FokI GGATG 1 cut(s) 32
FriOI GRGCYC 1 cut(s) 175
Fsp4HI GCNGC 7 cut(s) 280, 475, 489, 765, 837, 878, 1332
FspBI CTAG 4 cut(s) 137, 224, 1035, 1061
GlaI GCGC 5 cut(s) 325, 364, 478, 704, 825
GluI GCNGC 7 cut(s) 280, 475, 489, 765, 837, 878, 1332
GsaI CCCAGC 3 cut(s) 995, 1205, 1350
HaeII RGCGCY 2 cut(s) 366, 480
HaeIII GGCC 6 cut(s) 5, 141, 243, 279, 339, 1040
HapII CCGG 9 cut(s) 75, 142, 177, 213, 336, 528, 632, 861, 1338
HgaI GACGC 2 cut(s) 104, 1323
HhaI GCGC 5 cut(s) 326, 365, 479, 705, 826
Hin1I GRCGYC 1 cut(s) 96
Hin6I GCGC 5 cut(s) 324, 363, 477, 703, 824
HinP1I GCGC 5 cut(s) 324, 363, 477, 703, 824
HincII GTYRAC 1 cut(s) 1006
HindII GTYRAC 1 cut(s) 1006
HindIII AAGCTT 2 cut(s) 182, 272
HinfI GANTC 3 cut(s) 405, 952, 1116
HpaII CCGG 9 cut(s) 75, 142, 177, 213, 336, 528, 632, 861, 1338
HphI GGTGA 5 cut(s) 220, 292, 1078, 1190, 1315
Hpy166II GTNNAC 6 cut(s) 292, 354, 849, 1006, 1086, 1311
Hpy188I TCNGA 9 cut(s) 230, 451, 613, 803, 899, 1112, 1230, 1257, 1296
Hpy188III TCNNGA 6 cut(s) 26, 310, 664, 861, 1120, 1144
Hpy8I GTNNAC 6 cut(s) 292, 354, 849, 1006, 1086, 1311
Hpy99I CGWCG 3 cut(s) 98, 1136, 1300
HpyAV CCTTC 3 cut(s) 355, 740, 1336
HpyCH4III ACNGT 2 cut(s) 124, 1090
HpyCH4IV ACGT 3 cut(s) 615, 692, 1313
HpyCH4V TGCA 5 cut(s) 505, 578, 593, 1214, 1331
HpyF10VI GCNNNNNNNGC 8 cut(s) 330, 485, 497, 590, 680, 761, 1211, 1328
HpyF3I CTNAG 2 cut(s) 129, 563
HpySE526I ACGT 3 cut(s) 615, 692, 1313
Hsp92I GRCGYC 1 cut(s) 96
HspAI GCGC 5 cut(s) 324, 363, 477, 703, 824
Kpn2I TCCGGA 1 cut(s) 860
KpnI GGTACC 1 cut(s) 52
KroI GCCGGC 1 cut(s) 141
KroNI GCCGGC 1 cut(s) 143
Kzo9I GATC 4 cut(s) 666, 741, 1122, 1195
LmnI GCTCC 3 cut(s) 138, 170, 338
Lsp1109I GCAGC 2 cut(s) 848, 1343
LweI GCATC 3 cut(s) 10, 306, 580
MaeI CTAG 4 cut(s) 137, 224, 1035, 1061
MaeII ACGT 3 cut(s) 615, 692, 1313
MaeIII GTNAC 5 cut(s) 208, 569, 688, 1056, 1076
MalI GATC 4 cut(s) 668, 743, 1124, 1197
MboI GATC 4 cut(s) 666, 741, 1122, 1195
MboII GAAGA 8 cut(s) 100, 244, 310, 550, 862, 1015, 1125, 1132
MflI RGATCY 1 cut(s) 1122
MhlI GDGCHC 1 cut(s) 175
MlsI TGGCCA 1 cut(s) 5
MluI ACGCGT 1 cut(s) 1182
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 946
MmeI TCCRAC 4 cut(s) 208, 903, 1150, 1319
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 1 cut(s) 860
MroNI GCCGGC 1 cut(s) 141
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 4 cut(s) 311, 443, 710, 1046
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 9 cut(s) 75, 142, 177, 213, 336, 528, 632, 861, 1338
MspR9I CCNGG 3 cut(s) 177, 1074, 1339
Mva1269I GAATGC 1 cut(s) 584
MvaI CCWGG 1 cut(s) 1074
MvnI CGCG 3 cut(s) 474, 767, 1184
MwoI GCNNNNNNNGC 8 cut(s) 330, 485, 497, 590, 680, 761, 1211, 1328
NaeI GCCGGC 1 cut(s) 143
NciI CCSGG 2 cut(s) 177, 1339
NdeII GATC 4 cut(s) 666, 741, 1122, 1195
NgoMIV GCCGGC 1 cut(s) 141
NlaIV GGNNCC 5 cut(s) 50, 172, 232, 352, 1124
NmeAIII GCCGAG 3 cut(s) 530, 832, 1309
NmuCI GTSAC 2 cut(s) 208, 688
PagI TCATGA 3 cut(s) 309, 663, 1143
PcsI WCGNNNNNNNCGW 1 cut(s) 1319
PctI GAATGC 1 cut(s) 584
PdiI GCCGGC 1 cut(s) 143
PfeI GAWTC 2 cut(s) 405, 1116
PfoI TCCNGGA 1 cut(s) 1337
PkrI GCNGC 7 cut(s) 281, 476, 490, 766, 838, 879, 1333
PleI GAGTC 1 cut(s) 946
PmaCI CACGTG 1 cut(s) 1314
PmlI CACGTG 1 cut(s) 1314
PpsI GAGTC 1 cut(s) 946
Ppu21I YACGTR 1 cut(s) 1314
Psp6I CCWGG 1 cut(s) 1072
PspCI CACGTG 1 cut(s) 1314
PspEI GGTNACC 1 cut(s) 208
PspFI CCCAGC 3 cut(s) 991, 1201, 1346
PspGI CCWGG 1 cut(s) 1072
PspN4I GGNNCC 5 cut(s) 50, 172, 232, 352, 1124
PspPI GGNCC 5 cut(s) 241, 351, 1038, 1253, 1308
PsuI RGATCY 1 cut(s) 1122
RsaI GTAC 4 cut(s) 15, 50, 293, 848
RsaNI GTAC 4 cut(s) 14, 49, 292, 847
RseI CAYNNNNRTG 4 cut(s) 311, 443, 710, 1046
SatI GCNGC 7 cut(s) 280, 475, 489, 765, 837, 878, 1332
Sau3AI GATC 4 cut(s) 666, 741, 1122, 1195
Sau96I GGNCC 5 cut(s) 241, 351, 1038, 1253, 1308
SchI GAGTC 1 cut(s) 946
ScrFI CCNGG 3 cut(s) 177, 1074, 1339
SduI GDGCHC 1 cut(s) 175
SfaNI GCATC 3 cut(s) 10, 306, 580
SinI GGWCC 3 cut(s) 351, 1253, 1308
SmiMI CAYNNNNRTG 4 cut(s) 311, 443, 710, 1046
SsiI CCGC 8 cut(s) 280, 417, 474, 488, 491, 638, 765, 877
SspI AATATT 1 cut(s) 1209
SspMI CTAG 4 cut(s) 137, 224, 1035, 1061
StyD4I CCNGG 3 cut(s) 175, 1072, 1337
StyI CCWWGG 2 cut(s) 136, 262
TaaI ACNGT 2 cut(s) 124, 1090
TaiI ACGT 3 cut(s) 618, 695, 1316
TaqI TCGA 5 cut(s) 37, 588, 744, 795, 1101
TatI WGTACW 1 cut(s) 846
TauI GCSGC 5 cut(s) 282, 477, 491, 767, 880
TfiI GAWTC 2 cut(s) 405, 1116
TscAI CASTG 1 cut(s) 739
TseFI GTSAC 2 cut(s) 208, 688
TseI GCWGC 2 cut(s) 836, 1331
Tsp45I GTSAC 2 cut(s) 208, 688
TspDTI ATGAA 5 cut(s) 472, 722, 1087, 1132, 1147
TspRI CASTG 1 cut(s) 739
VpaK11BI GGWCC 3 cut(s) 351, 1253, 1308
XcmI CCANNNNNNNNNTGG 2 cut(s) 13, 508
XmaJI CCTAGG 1 cut(s) 136
XspI CTAG 4 cut(s) 137, 224, 1035, 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.