Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0007767

Physical Location & Seq

Genomic Coordinates Reverse (-)

671392 .. 675079

Gene Structure 3688 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1004300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGGAATGAGGGAGTGGAATTGGGGCTCTGGAAAATCCTCCAAGAGAGGTAGAGGCAGTGGAGGACCACCAGACGAAGACATCACCACATCTTCTGGTTGCATGTGTGCCGTCTTTCAGTTGTTTGACTTCCACCAACTTCAGCTTGCCAACTTACACCACCACCACCAACAACAACAACCTTCTTTCGACCCAGAAGTTCTCACAATACCAAAAGGTGTTGAAGCACCTAGAAATAGCTTGGACTCATCAGAAGGGACTTCACTGTCATCTATCACAAAAGAAGAAGAAAATTTAAACAGTCCAATTTTGAAGTTCCAGAAAAGTATGCAGATCAAAATAACCAAAGCAAGAATTCCTTCAGTTGATTTTTCATCGGATATTAGCTCACCAGGCATGACAAAGACTCCAAGTTTGGTAGCAAGGCTAATGGGTCTTGACCTTCTTCCTGACCAAACAAACTCACCCTGTTCAACTTCATCATCCAGCACCATCAGTCATAAAAAAAAAACAAAGTCCAGGAAACCACTCAAAGGTAGAGCAAGACGACATGCCATGGACACGAGTGACATGACTACTACAGCTGGAACTCGCTCACTGCCTGAGACTCCGAGAATATCATCAGCCAGAAGATCGGACGTCGATCTTCACCACCGGCTTTCGCTTCAAATCAACAAAGAAAATGTTGGGGTTTCTGAGGACTTGGATTTTTCCAAGTCATCGTACAAAAGGAGGGACTTAAAGCTGATTAATTTTGGAGACCATGAGAACGTGAAAAGCCCAAGTCACTACGCTAGGCAAATTGTGAAGCAGGTGAGGGAAAGTGTGAGTAGGAGAGTTGGTTTGGACATCACAAACACCCCCAGATCATCAGTCAACAGAGACAACAAGAAGCAAGGCAGAGATGAGCTGCTTCTCCAACTCAAATCCAAGAACATTGCTAATGCTAATGCTGCTTCAAAAAGTGCTGTCGCAAAGGAAGGAAGTAGTACTTCAACTTCTTGTTCTCCCAGGCTCAGATTCTTGGACTCCAACAGTCCCAAAGATCAAATTCAAGCACTTCCTTCCAAACCCAAATCACCTCTATCGTCTATACCTCTAAAGCCAAAGCCTTTACAGCCTTTGAAAGAAGAACAGCAGCATCAGAAGCCGAAAAGCCAGGCTGCTTCAGTTCAGAAGCGCAGATCAAAATCAGCAGATGATATTGGATACGGTCCAAGGCTGAAGAATAAGCAGAAGGAAGAAGCATTCGTGAGTTCATCAACGGCTACAAGAGCCATCAGTAATAATCATATTATTCCAGGTGACAAGAAATGCAAGAAAACCCAATTATTGTTGTCAAGCAATGTCCCTACCCTTCTTCTTGTCAAGAAAGATCCTTCACGTCCAGCTACCAAAATCCCCTCAAAACAGCAAGCACAAGAAGTAAAATCTGACGCCCAACAATCGAAACGTAGGTGGTCACAGTTATCTAGTTCCACGAGCCAAACGTACTACAAACATCAACAAGTGACCCGGGTCCCCCACGTGCTCGCCACCCGAGACTGCATCAACTTTACCGGCGACATCCCTAACGGTAACGCCGGCACCAATACCAGATCAACCACCGGTGCTGGTGGAGCAGAGGCAGAGCTGCACCTGTACGTCACAAGAATATTAGCCCGTACCGGCATCGATAAAGACACCCTAGTCTCCTTCACAAATTGGTTCTCTCCTTCCCATCCTCTCGACCCCTCCATTTTTTACCACCTCGAACATTCTTTCTCTACCGCTAGCGGTAAAAACGAGTTTTCGAGTTCGCTTGGTCATAGGTGGAACAGAAAACTACTGTTTCACCTTGTGGATGAAATTTTGGTGGAATTTTTTAGGCCTTATATCAACTTAAAGCCATGGGTTACGAGCTCAAATAATATTCTATTTGAATATTGCAATGGAATGCGTATCAATGGGTCACATTTGATCAACATTTTGTGCTACAAAATTCAGAGCTTCCCATGTGCCGACTGCCAAGTTCTCGAAGACATCGACGCATTAATCGACAAGGACTTGCCGGAATCGAAGGTGCAGAGCGAAATGGCATTTGAGGAAGTAGCAGAAGGGATTGTTAAGGAGGTAGAGAAGGACATTTTGGACACTCTCATACATGAAACGGCTATGTCCCTATGGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

724

Amino Acids

80.54

Weight (kDa)

9.51

Isoelectric Point (pI)

51.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	134 - 153	1.5e-09	DUF761-associated sequence motif
DUF4378	PF14309	546 - 716	3.1e-29	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62170 AT5G62170 AT5G62170 AT5G62170
fragaria_vesca	FvH4_7g28730 FvH4_7g28730
malus_domestica	MD00G1004300.v1.1 MD01G1193200.v1.1
prunus_persica	Prupe.2G287400_v2.0.a1 Prupe.2G287400_v2.0.a1
pyrus_communis	pycom01g20380 pycom07g23950
rosa_chinensis	RchiOBHm_Chr1g0376241
rosa_laevigata	RLG00000026617
rosa_multiflora	Rmu_co8277139.1_g000001 Rmu_ssc0000116.1_g000057
rosa_roxburghii	Rroxscaffold_4G00282280
rosa_rugosa	Rorug01G0394700 Rorug01G0394800
rosa_samantha	Rh1AG406200 Rh1BG369900 Rh1CG382800 Rh1DG399700
rosa_wichuraiana	Rw1G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	802
AasI	GACNNNNNNGTC	2 cut(s)	265, 1688
AatII	GACGTC	1 cut(s)	642
Acc36I	ACCTGC	1 cut(s)	802
AccB1I	GGYRCC	1 cut(s)	1586
AciI	CCGC	2 cut(s)	1770, 1776
AclWI	GGATC	1 cut(s)	1370
AcsI	RAATTY	6 cut(s)	292, 354, 1050, 1848, 1859, 1980
AcuI	CTGAAG	4 cut(s)	125, 345, 1152, 1244
AcvI	CACGTG	1 cut(s)	1528
AcyI	GRCGYC	2 cut(s)	639, 1437
AdeI	CACNNNGTG	1 cut(s)	1840
AfaI	GTAC	5 cut(s)	725, 991, 1493, 1643, 1666
AfiI	CCNNNNNNNGG	1 cut(s)	533
AgeI	ACCGGT	1 cut(s)	1607
AgsI	TTSAA	9 cut(s)	224, 313, 474, 668, 960, 996, 1055, 1126, 1922
AjiI	CACGTC	1 cut(s)	1385
AjnI	CCWGG	5 cut(s)	391, 518, 1010, 1158, 1300
AjuI	GAANNNNNNNTTGG	2 cut(s)	2111, 2143
Alw21I	GWGCWC	2 cut(s)	1533, 1904
Alw26I	GTCTC	5 cut(s)	599, 753, 876, 1536, 1696
AlwI	GGATC	1 cut(s)	1370
Ama87I	CYCGRG	2 cut(s)	1515, 1539
AoxI	GGCC	1 cut(s)	1868
ApeKI	GCWGC	5 cut(s)	910, 953, 1138, 1163, 1633
ApoI	RAATTY	6 cut(s)	292, 354, 1050, 1848, 1859, 1980
ArsI	GACNNNNNNTTYG	2 cut(s)	397, 429
AseI	ATTAAT	2 cut(s)	750, 2033
AsiGI	ACCGGT	1 cut(s)	1607
Asp700I	GAANNNNTTC	1 cut(s)	358
AspLEI	GCGC	1 cut(s)	1182
AspS9I	GGNCC	3 cut(s)	65, 1214, 1519
AsuC2I	CCSGG	2 cut(s)	1516, 1517
AsuHPI	GGTGA	8 cut(s)	76, 381, 456, 641, 826, 1071, 1316, 1826
AsuNHI	GCTAGC	1 cut(s)	1772
AvaI	CYCGRG	2 cut(s)	1515, 1539
AvaII	GGWCC	3 cut(s)	65, 1214, 1519
BanI	GGYRCC	1 cut(s)	1586
BanII	GRGCYC	2 cut(s)	29, 1904
BarI	GAAGNNNNNNTAC	2 cut(s)	982, 1014
BauI	CACGAG	2 cut(s)	562, 1480
BbrPI	CACGTG	1 cut(s)	1528
BbsI	GAAGAC	2 cut(s)	84, 2025
Bbv12I	GWGCWC	2 cut(s)	1533, 1904
BbvI	GCAGC	5 cut(s)	897, 940, 1150, 1150, 1620
BccI	CCATC	3 cut(s)	500, 1286, 1728
BceAI	ACGGC	3 cut(s)	95, 1281, 2166
BciT130I	CCWGG	5 cut(s)	393, 520, 1012, 1160, 1302
BciVI	GTATCC	1 cut(s)	1202
BclI	TGATCA	1 cut(s)	1959
BcnI	CCSGG	2 cut(s)	1516, 1517
BcoDI	GTCTC	5 cut(s)	599, 753, 876, 1536, 1696
BfaI	CTAG	5 cut(s)	231, 795, 1473, 1688, 1773
BfmI	CTRYAG	1 cut(s)	579
BfuAI	ACCTGC	1 cut(s)	802
BfuI	GTATCC	1 cut(s)	1202
BisI	GCNGC	5 cut(s)	911, 954, 1139, 1164, 1634
BlsI	GCNGC	5 cut(s)	912, 955, 1140, 1165, 1635
BmcAI	AGTACT	1 cut(s)	991
Bme1390I	CCNGG	7 cut(s)	393, 520, 1012, 1160, 1302, 1516, 1517
Bme18I	GGWCC	3 cut(s)	65, 1214, 1519
BmeT110I	CYCGRG	2 cut(s)	1515, 1539
BmgBI	CACGTC	1 cut(s)	1385
BmgT120I	GGNCC	3 cut(s)	65, 1214, 1519
BmiI	GGNNCC	3 cut(s)	1520, 1521, 1588
BmrFI	CCNGG	7 cut(s)	393, 520, 1012, 1160, 1302, 1516, 1517
BmsI	GCATC	3 cut(s)	1150, 1557, 1680
BmtI	GCTAGC	1 cut(s)	1776
BoxI	GACNNNNGTC	1 cut(s)	1517
BpiI	GAAGAC	2 cut(s)	84, 2025
BpuMI	CCSGG	2 cut(s)	1516, 1517
Bsa29I	ATCGAT	1 cut(s)	1674
BsaAI	YACGTR	1 cut(s)	1528
BsaBI	GATNNNNATC	1 cut(s)	1189
BsaHI	GRCGYC	2 cut(s)	639, 1437
BsaI	GGTCTC	1 cut(s)	753
BsaJI	CCNNGG	5 cut(s)	555, 1010, 1217, 1515, 1889
BsaWI	WCCGGW	1 cut(s)	1607
BsaXI	ACNNNNNCTCC	4 cut(s)	391, 421, 826, 856
Bsc4I	CCNNNNNNNGG	1 cut(s)	533
Bse118I	RCCGGY	5 cut(s)	654, 1559, 1583, 1607, 1667
Bse3DI	GCAATG	3 cut(s)	936, 1351, 1936
Bse8I	GATNNNNATC	1 cut(s)	1189
BseBI	CCWGG	5 cut(s)	393, 520, 1012, 1160, 1302
BseCI	ATCGAT	1 cut(s)	1674
BseDI	CCNNGG	5 cut(s)	555, 1010, 1217, 1515, 1889
BseGI	GGATG	4 cut(s)	482, 1566, 1720, 1849
BseJI	GATNNNNATC	1 cut(s)	1189
BseLI	CCNNNNNNNGG	1 cut(s)	533
BseMI	GCAATG	3 cut(s)	936, 1351, 1936
BseMII	CTCAG	3 cut(s)	594, 687, 1030
BseXI	GCAGC	5 cut(s)	897, 940, 1150, 1150, 1620
BsgI	GTGCAG	2 cut(s)	1619, 2084
BshFI	GGCC	1 cut(s)	1870
BshNI	GGYRCC	1 cut(s)	1586
BshTI	ACCGGT	1 cut(s)	1607
BshVI	ATCGAT	1 cut(s)	1674
BsiHKAI	GWGCWC	2 cut(s)	1533, 1904
BsiHKCI	CYCGRG	2 cut(s)	1515, 1539
BsiSI	CCGG	7 cut(s)	655, 1516, 1560, 1584, 1608, 1668, 2051
BslFI	GGGAC	6 cut(s)	271, 749, 1023, 1334, 1505, 2143
BslI	CCNNNNNNNGG	1 cut(s)	533
BsmAI	GTCTC	5 cut(s)	599, 753, 876, 1536, 1696
BsmFI	GGGAC	6 cut(s)	271, 749, 1023, 1334, 1505, 2143
BsmI	GAATGC	2 cut(s)	1247, 1941
BsnI	GGCC	1 cut(s)	1870
Bso31I	GGTCTC	1 cut(s)	753
BsoBI	CYCGRG	2 cut(s)	1515, 1539
Bsp1286I	GDGCHC	3 cut(s)	29, 1533, 1904
Bsp143I	GATC	9 cut(s)	333, 632, 643, 866, 1045, 1184, 1375, 1598, 1959
Bsp19I	CCATGG	2 cut(s)	555, 1889
BspACI	CCGC	2 cut(s)	1770, 1776
BspANI	GGCC	1 cut(s)	1870
BspCNI	CTCAG	3 cut(s)	595, 688, 1029
BspDI	ATCGAT	1 cut(s)	1674
BspLI	GGNNCC	3 cut(s)	1520, 1521, 1588
BspMI	ACCTGC	1 cut(s)	802
BspOI	GCTAGC	1 cut(s)	1776
BspPI	GGATC	1 cut(s)	1370
BspT107I	GGYRCC	1 cut(s)	1586
BspTNI	GGTCTC	1 cut(s)	753
BsrDI	GCAATG	3 cut(s)	936, 1351, 1936
BsrFI	RCCGGY	5 cut(s)	654, 1559, 1583, 1607, 1667
BssAI	RCCGGY	5 cut(s)	654, 1559, 1583, 1607, 1667
BssECI	CCNNGG	5 cut(s)	555, 1010, 1217, 1515, 1889
BssMI	GATC	9 cut(s)	333, 632, 643, 866, 1045, 1184, 1375, 1598, 1959
BssNI	GRCGYC	2 cut(s)	639, 1437
BssSI	CACGAG	2 cut(s)	562, 1480
BssT1I	CCWWGG	3 cut(s)	555, 1217, 1889
Bst2BI	CACGAG	2 cut(s)	562, 1480
Bst2UI	CCWGG	5 cut(s)	393, 520, 1012, 1160, 1302
Bst4CI	ACNGT	7 cut(s)	267, 302, 1037, 1214, 1467, 1577, 1830
BstACI	GRCGYC	2 cut(s)	639, 1437
BstBAI	YACGTR	1 cut(s)	1528
BstC8I	GCNNGC	5 cut(s)	147, 1416, 1533, 1585, 1774
BstDEI	CTNAG	3 cut(s)	603, 696, 1016
BstDSI	CCRYGG	2 cut(s)	555, 1889
BstF5I	GGATG	4 cut(s)	482, 1566, 1720, 1849
BstHHI	GCGC	1 cut(s)	1182
BstKTI	GATC	9 cut(s)	336, 635, 646, 869, 1048, 1187, 1378, 1601, 1962
BstMAI	GTCTC	5 cut(s)	599, 753, 876, 1536, 1696
BstMBI	GATC	9 cut(s)	333, 632, 643, 866, 1045, 1184, 1375, 1598, 1959
BstMWI	GCNNNNNNNGC	6 cut(s)	393, 953, 1117, 1147, 1274, 1619
BstNI	CCWGG	5 cut(s)	393, 520, 1012, 1160, 1302
BstNSI	RCATGY	2 cut(s)	106, 554
BstPAI	GACNNNNGTC	1 cut(s)	1517
BstSCI	CCNGG	7 cut(s)	391, 518, 1010, 1158, 1300, 1514, 1515
BstSFI	CTRYAG	1 cut(s)	579
BstV1I	GCAGC	5 cut(s)	897, 940, 1150, 1150, 1620
BstV2I	GAAGAC	2 cut(s)	84, 2025
BstX2I	RGATCY	1 cut(s)	1375
BstYI	RGATCY	1 cut(s)	1375
Bsu15I	ATCGAT	1 cut(s)	1674
BsuI	GTATCC	1 cut(s)	1202
BsuRI	GGCC	1 cut(s)	1870
BsuTUI	ATCGAT	1 cut(s)	1674
BtgI	CCRYGG	2 cut(s)	555, 1889
BtrI	CACGTC	1 cut(s)	1385
BtsCI	GGATG	4 cut(s)	482, 1566, 1720, 1849
BtsI	GCAGTG	2 cut(s)	64, 596
BtsIMutI	CAGTG	3 cut(s)	64, 263, 596
BveI	ACCTGC	1 cut(s)	802
Cac8I	GCNNGC	5 cut(s)	147, 1416, 1533, 1585, 1774
CfoI	GCGC	1 cut(s)	1182
Cfr10I	RCCGGY	5 cut(s)	654, 1559, 1583, 1607, 1667
Cfr13I	GGNCC	3 cut(s)	65, 1214, 1519
Cfr9I	CCCGGG	1 cut(s)	1515
ClaI	ATCGAT	1 cut(s)	1674
CseI	GACGC	2 cut(s)	1445, 2036
Csp6I	GTAC	5 cut(s)	724, 990, 1492, 1642, 1665
CspAI	ACCGGT	1 cut(s)	1607
CviAII	CATG	9 cut(s)	103, 397, 551, 556, 571, 764, 1890, 1995, 2144
CviQI	GTAC	5 cut(s)	724, 990, 1492, 1642, 1665
DdeI	CTNAG	3 cut(s)	603, 696, 1016
DpnI	GATC	9 cut(s)	335, 634, 645, 868, 1047, 1186, 1377, 1600, 1961
DpnII	GATC	9 cut(s)	333, 632, 643, 866, 1045, 1184, 1375, 1598, 1959
DraI	TTTAAA	1 cut(s)	297
DraIII	CACNNNGTG	1 cut(s)	1840
DrdI	GACNNNNNNGTC	2 cut(s)	265, 1688
DseDI	GACNNNNNNGTC	2 cut(s)	265, 1688
Ecl136II	GAGCTC	1 cut(s)	1902
Eco130I	CCWWGG	3 cut(s)	555, 1217, 1889
Eco147I	AGGCCT	1 cut(s)	1870
Eco24I	GRGCYC	2 cut(s)	29, 1904
Eco31I	GGTCTC	1 cut(s)	753
Eco47I	GGWCC	3 cut(s)	65, 1214, 1519
Eco53kI	GAGCTC	1 cut(s)	1902
Eco57I	CTGAAG	4 cut(s)	125, 345, 1152, 1244
Eco72I	CACGTG	1 cut(s)	1528
Eco88I	CYCGRG	2 cut(s)	1515, 1539
EcoICRI	GAGCTC	1 cut(s)	1902
EcoO109I	RGGNCCY	1 cut(s)	1519
EcoRI	GAATTC	1 cut(s)	354
EcoRII	CCWGG	5 cut(s)	391, 518, 1010, 1158, 1300
EcoT14I	CCWWGG	3 cut(s)	555, 1217, 1889
EcoT38I	GRGCYC	2 cut(s)	29, 1904
ErhI	CCWWGG	3 cut(s)	555, 1217, 1889
FaeI	CATG	9 cut(s)	106, 400, 554, 559, 574, 767, 1893, 1998, 2147
FalI	AAGNNNNNCTT	4 cut(s)	343, 375, 976, 1008
FaqI	GGGAC	6 cut(s)	271, 749, 1023, 1334, 1505, 2143
FatI	CATG	9 cut(s)	102, 396, 550, 555, 570, 763, 1889, 1994, 2143
FbaI	TGATCA	1 cut(s)	1959
Fnu4HI	GCNGC	5 cut(s)	911, 954, 1139, 1164, 1634
FokI	GGATG	4 cut(s)	469, 1553, 1707, 1856
FriOI	GRGCYC	2 cut(s)	29, 1904
Fsp4HI	GCNGC	5 cut(s)	911, 954, 1139, 1164, 1634
FspBI	CTAG	5 cut(s)	231, 795, 1473, 1688, 1773
GlaI	GCGC	1 cut(s)	1181
GluI	GCNGC	5 cut(s)	911, 954, 1139, 1164, 1634
HaeIII	GGCC	1 cut(s)	1870
HapII	CCGG	7 cut(s)	655, 1516, 1560, 1584, 1608, 1668, 2051
HgaI	GACGC	2 cut(s)	1445, 2036
HhaI	GCGC	1 cut(s)	1182
Hin1I	GRCGYC	2 cut(s)	639, 1437
Hin1II	CATG	9 cut(s)	106, 400, 554, 559, 574, 767, 1893, 1998, 2147
Hin6I	GCGC	1 cut(s)	1180
HinP1I	GCGC	1 cut(s)	1180
HincII	GTYRAC	1 cut(s)	877
HindII	GTYRAC	1 cut(s)	877
HinfI	GANTC	6 cut(s)	245, 406, 607, 1020, 1028, 2054
HpaII	CCGG	7 cut(s)	655, 1516, 1560, 1584, 1608, 1668, 2051
HphI	GGTGA	8 cut(s)	76, 381, 456, 641, 826, 1071, 1316, 1826
Hpy166II	GTNNAC	1 cut(s)	877
Hpy188III	TCNNGA	8 cut(s)	30, 319, 437, 449, 1252, 1369, 1727, 2015
Hpy8I	GTNNAC	1 cut(s)	877
Hpy99I	CGWCG	2 cut(s)	644, 2030
HpyCH4III	ACNGT	7 cut(s)	267, 302, 1037, 1214, 1467, 1577, 1830
HpyCH4IV	ACGT	7 cut(s)	639, 771, 1384, 1453, 1490, 1527, 1644
HpyCH4V	TGCA	7 cut(s)	102, 331, 1317, 1548, 1636, 1929, 2065
HpyF10VI	GCNNNNNNNGC	6 cut(s)	393, 953, 1117, 1147, 1274, 1619
HpyF3I	CTNAG	3 cut(s)	603, 696, 1016
HpySE526I	ACGT	7 cut(s)	639, 771, 1384, 1453, 1490, 1527, 1644
Hsp92I	GRCGYC	2 cut(s)	639, 1437
Hsp92II	CATG	9 cut(s)	106, 400, 554, 559, 574, 767, 1893, 1998, 2147
HspAI	GCGC	1 cut(s)	1180
KflI	GGGWCCC	1 cut(s)	1519
KroI	GCCGGC	1 cut(s)	1583
KroNI	GCCGGC	1 cut(s)	1585
Ksp22I	TGATCA	1 cut(s)	1959
Kzo9I	GATC	9 cut(s)	333, 632, 643, 866, 1045, 1184, 1375, 1598, 1959
LmnI	GCTCC	1 cut(s)	1619
Lsp1109I	GCAGC	5 cut(s)	897, 940, 1150, 1150, 1620
LweI	GCATC	3 cut(s)	1150, 1557, 1680
MaeI	CTAG	5 cut(s)	231, 795, 1473, 1688, 1773
MaeII	ACGT	7 cut(s)	639, 771, 1384, 1453, 1490, 1527, 1644
MaeIII	GTNAC	9 cut(s)	566, 785, 1304, 1461, 1510, 1577, 1645, 1894, 1950
MalI	GATC	9 cut(s)	335, 634, 645, 868, 1047, 1186, 1377, 1600, 1961
MboI	GATC	9 cut(s)	333, 632, 643, 866, 1045, 1184, 1375, 1598, 1959
MflI	RGATCY	1 cut(s)	1375
MhlI	GDGCHC	3 cut(s)	29, 1533, 1904
MlyI	GAGTC	4 cut(s)	239, 400, 601, 1022
MmeI	TCCRAC	2 cut(s)	943, 1056
MroNI	GCCGGC	1 cut(s)	1583
MroXI	GAANNNNTTC	1 cut(s)	358
MseI	TTAA	6 cut(s)	296, 740, 750, 1883, 2033, 2106
MspA1I	CMGCKG	1 cut(s)	584
MspI	CCGG	7 cut(s)	655, 1516, 1560, 1584, 1608, 1668, 2051
MspR9I	CCNGG	7 cut(s)	393, 520, 1012, 1160, 1302, 1516, 1517
Mva1269I	GAATGC	2 cut(s)	1247, 1941
MvaI	CCWGG	5 cut(s)	393, 520, 1012, 1160, 1302
MwoI	GCNNNNNNNGC	6 cut(s)	393, 953, 1117, 1147, 1274, 1619
NaeI	GCCGGC	1 cut(s)	1585
NciI	CCSGG	2 cut(s)	1516, 1517
NcoI	CCATGG	2 cut(s)	555, 1889
NdeII	GATC	9 cut(s)	333, 632, 643, 866, 1045, 1184, 1375, 1598, 1959
NgoMIV	GCCGGC	1 cut(s)	1583
NheI	GCTAGC	1 cut(s)	1772
NlaIII	CATG	9 cut(s)	106, 400, 554, 559, 574, 767, 1893, 1998, 2147
NlaIV	GGNNCC	3 cut(s)	1520, 1521, 1588
NmuCI	GTSAC	7 cut(s)	566, 785, 1304, 1461, 1510, 1645, 1950
NspI	RCATGY	2 cut(s)	106, 554
PaqCI	CACCTGC	1 cut(s)	802
PceI	AGGCCT	1 cut(s)	1870
PcsI	WCGNNNNNNNCGW	3 cut(s)	1487, 2022, 2034
PctI	GAATGC	2 cut(s)	1247, 1941
PdiI	GCCGGC	1 cut(s)	1585
PdmI	GAANNNNTTC	1 cut(s)	358
PfeI	GAWTC	2 cut(s)	1020, 2054
PfoI	TCCNGGA	1 cut(s)	518
PinAI	ACCGGT	1 cut(s)	1607
PkrI	GCNGC	5 cut(s)	912, 955, 1140, 1165, 1635
PleI	GAGTC	4 cut(s)	239, 400, 601, 1022
PmaCI	CACGTG	1 cut(s)	1528
PmlI	CACGTG	1 cut(s)	1528
PpsI	GAGTC	4 cut(s)	239, 400, 601, 1022
Ppu21I	YACGTR	1 cut(s)	1528
PpuMI	RGGWCCY	1 cut(s)	1519
PshAI	GACNNNNGTC	1 cut(s)	1517
PshBI	ATTAAT	2 cut(s)	750, 2033
Psp124BI	GAGCTC	1 cut(s)	1904
Psp5II	RGGWCCY	1 cut(s)	1519
Psp6I	CCWGG	5 cut(s)	391, 518, 1010, 1158, 1300
PspCI	CACGTG	1 cut(s)	1528
PspGI	CCWGG	5 cut(s)	391, 518, 1010, 1158, 1300
PspN4I	GGNNCC	3 cut(s)	1520, 1521, 1588
PspPI	GGNCC	3 cut(s)	65, 1214, 1519
PspPPI	RGGWCCY	1 cut(s)	1519
PsuI	RGATCY	1 cut(s)	1375
PvuII	CAGCTG	1 cut(s)	584
RsaI	GTAC	5 cut(s)	725, 991, 1493, 1643, 1666
RsaNI	GTAC	5 cut(s)	724, 990, 1492, 1642, 1665
SacI	GAGCTC	1 cut(s)	1904
SaqAI	TTAA	6 cut(s)	296, 740, 750, 1883, 2033, 2106
SatI	GCNGC	5 cut(s)	911, 954, 1139, 1164, 1634
Sau3AI	GATC	9 cut(s)	333, 632, 643, 866, 1045, 1184, 1375, 1598, 1959
Sau96I	GGNCC	3 cut(s)	65, 1214, 1519
ScaI	AGTACT	1 cut(s)	991
SchI	GAGTC	4 cut(s)	239, 400, 601, 1022
ScrFI	CCNGG	7 cut(s)	393, 520, 1012, 1160, 1302, 1516, 1517
SduI	GDGCHC	3 cut(s)	29, 1533, 1904
SfaNI	GCATC	3 cut(s)	1150, 1557, 1680
SfcI	CTRYAG	1 cut(s)	579
SgrAI	CRCCGGYG	1 cut(s)	1607
SinI	GGWCC	3 cut(s)	65, 1214, 1519
SmaI	CCCGGG	1 cut(s)	1517
SseBI	AGGCCT	1 cut(s)	1870
SsiI	CCGC	2 cut(s)	1770, 1776
SspI	AATATT	3 cut(s)	1656, 1912, 1925
SspMI	CTAG	5 cut(s)	231, 795, 1473, 1688, 1773
SstI	GAGCTC	1 cut(s)	1904
StuI	AGGCCT	1 cut(s)	1870
StyD4I	CCNGG	7 cut(s)	391, 518, 1010, 1158, 1300, 1514, 1515
StyI	CCWWGG	3 cut(s)	555, 1217, 1889
TaaI	ACNGT	7 cut(s)	267, 302, 1037, 1214, 1467, 1577, 1830
TaiI	ACGT	7 cut(s)	642, 774, 1387, 1456, 1493, 1530, 1647
TatI	WGTACW	1 cut(s)	989
TfiI	GAWTC	2 cut(s)	1020, 2054
Tru1I	TTAA	6 cut(s)	296, 740, 750, 1883, 2033, 2106
Tru9I	TTAA	6 cut(s)	296, 740, 750, 1883, 2033, 2106
TscAI	CASTG	3 cut(s)	64, 270, 603
TseFI	GTSAC	7 cut(s)	566, 785, 1304, 1461, 1510, 1645, 1950
TseI	GCWGC	5 cut(s)	910, 953, 1138, 1163, 1633
Tsp45I	GTSAC	7 cut(s)	566, 785, 1304, 1461, 1510, 1645, 1950
TspDTI	ATGAA	5 cut(s)	363, 468, 1248, 1860, 2160
TspMI	CCCGGG	1 cut(s)	1515
TspRI	CASTG	3 cut(s)	64, 270, 603
VpaK11BI	GGWCC	3 cut(s)	65, 1214, 1519
VspI	ATTAAT	2 cut(s)	750, 2033
XapI	RAATTY	6 cut(s)	292, 354, 1050, 1848, 1859, 1980
XceI	RCATGY	2 cut(s)	106, 554
XmaI	CCCGGG	1 cut(s)	1515
XmnI	GAANNNNTTC	1 cut(s)	358
XspI	CTAG	5 cut(s)	231, 795, 1473, 1688, 1773
ZraI	GACGTC	1 cut(s)	640
ZrmI	AGTACT	1 cut(s)	991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.