Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0007767

Physical Location & Seq

Genomic Coordinates Reverse (-)

29202873 .. 29206597

Gene Structure 3725 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1193200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2184 bp

ATGGGAATGAGGGAGTGGTATTGGGGTTCTGGAAAGTCCTCCAAGAGAGGTAGAGGTGGTGGAGGACGGCCAGAAAAAGACATCACCACATCTTCTGGTTGCATGTGTGCCGTCTTTCAATTGTTTGACTTTCACCAACTTCAGCTTGCCAACCTACACCACCACCACCAACAACCTTCTTTCCACCCAGAAGATCTCACAGTACCAAAAGGTGTTGAAGCACCTAGGAACAGCTTGGATTCATCAGAAGGGACTTCATTATCATCTATCACAAAAGAAGAAGATAATTTAAACCGTCCAATTTTGAAATTCCAGAAGGGTATGCAGATCAAAACAACCAAAGCAAGAACTTCTTCAATTGATTTTTCATCAGATATTAGCTCACCAGGCATGACAAAGACTCCAAGTTTGGTAGCAAGGCTAATGGGTCTTGACCTTCTTCCTGACCAAACCAACTCACCCTCTTCAACTTCATCATCCAGCACCACCACTCATAAAAAAATTTCAAAGGCCAGCAAACCACTCAAAGGTAGAGCAAGACGACATGTCGTCGACACGAGTGACATGAATACTGCAGACGGAACCCGCTCATTGCCTGAGACTCCAAGGATATCATCAGCCAGAAGATCAGACGTTGATCTTCACCACCGGCTTTCGCTTCAAATCAACAAGGAGAATGCTGGGGTTTCTGAGGACTTGGATTTTTCCAAGTCTTCATACAATAGGAGGGACTTAAAGCTGATTAATTTTGGGGATCATGAGAACGTAAAAAGCCCAAGTCACTACGCTAGGCAAATTGTGAAGCAGGTGAGAGAAAGTATGAGTAGGAGAGTTGGTTTGGACATCACAAACACCTCCAGACCATCAGTCGACACAGACAACAAGAAGCAAGGCAGAGATGAGCTGCTTCTCCAACTCAAATCCAAGAACATTGCCAATGCTAATGCTTCTGCTGCTTCAAAGAGTGCTTTTGCCAAGGAACGAAGTAGTACTCCAGCTTCTTGTTCTCCCAGGATCAGATTCTTGGAGTCCAACGGTCCCAAAGATCAAATTCAAGCCCTTCCTCCAAAACCCAAATCACCTCTCTCGTCTTTACCTCTAAAGCCAAAGCCTTTGCAGCCATTGAAAGAAGAACAGCAGCAGCAGAAGCAGAAAAGCCAGACTGCTTCAGTTCAGAAGCGCAGACCAAAATTAGCAGATGATATTGGATACGGTCCAAGGATGAAGAATAAGCAGAAGGAAGAAGCATTCGTGAGTCCATCAACTGCTACAAGAGCCATCAAGAATAATCATATTATTCCAGGTGACAAGAAATGCAAGAAAACCCAATTATTGTTGTCAAGCAATGTCCCTACCCTTCTTCCTGTCAAGAAAAATCCTTCACCTCCAGCTACCAAAATTCCCCCAAAACAGGCACAACAAGTAATATCTGACGCCCAACAATCGAAACGTAGGCCGTCACGGTTATCTAGTTCCACGAGCCAAACGTACTACAAACATCAACAAGTGTCCCGGCCCCCCCACGTGCTCGCCACCCAAGACTGCATCAAGTTTACCGGCGACATTCCTAACGGTAACACCGGCACCACCATCAGATCAGCCACCGGTGCTGGTGGAGCAGAGGCAGAGATGCACCTGTACGTCACAAGAATCATAGCCCGTACTGGCATCGATAAAGACACCCTAGTCTCCTTCACAAATTGGTTCTCTCCTTCCCATCCCCTCGACCCCTCCATTTTTTACCACCTCGAACACTCTTTCTCTACCACTAGTATTACCACCACTAGCGGTAAAAACGAGTTTTCCAGTCAGCTTGGTCATAGGTGGAACAGAAAGTTACTGTTTCACCTTGTGGATGAAATTTTGGTGGAATTTTTGAGACCCTATATCAACTTAAAGCCATGGGTTACGAGCTCAAATAATATTCAATTTGAACATTGCAATGGTATGCGTATCAATGGGTCGCATTTGATCAACATTTTGTGCTACAAAATTCAGAGCTTCCCATCTGTTGACTGTCAAGTTCTCGATGACATCGATGCATTAATCGACAAGGACTTGCCGGAATCAAAGGTGCAGAGCGAAATGGCATTTGAGGAAGAAGGAGAAGGGATTGTTAGGGAGGTAGAGAAGGACATTTTAGACACTCTCATACATGAAACGGCTATGTCCCTATTGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4378 VARLMGL

Protein Analysis

728

Amino Acids

80.89

Weight (kDa)

9.57

Isoelectric Point (pI)

53.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VARLMGL	PF14383	132 - 151	1.5e-09	DUF761-associated sequence motif
DUF4378	PF14309	545 - 720	6.1e-30	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007767)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62170 AT5G62170 AT5G62170 AT5G62170
fragaria_vesca	FvH4_7g28730 FvH4_7g28730
malus_domestica	MD00G1004300.v1.1 MD01G1193200.v1.1
prunus_persica	Prupe.2G287400_v2.0.a1 Prupe.2G287400_v2.0.a1
pyrus_communis	pycom01g20380 pycom07g23950
rosa_chinensis	RchiOBHm_Chr1g0376241
rosa_laevigata	RLG00000026617
rosa_multiflora	Rmu_co8277139.1_g000001 Rmu_ssc0000116.1_g000057
rosa_roxburghii	Rroxscaffold_4G00282280
rosa_rugosa	Rorug01G0394700 Rorug01G0394800
rosa_samantha	Rh1AG406200 Rh1BG369900 Rh1CG382800 Rh1DG399700
rosa_wichuraiana	Rw1G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	796
AasI	GACNNNNNNGTC	1 cut(s)	1685
Acc36I	ACCTGC	1 cut(s)	796
AccB1I	GGYRCC	1 cut(s)	1583
AccBSI	CCGCTC	1 cut(s)	588
AccI	GTMKAC	2 cut(s)	552, 870
AciI	CCGC	2 cut(s)	586, 1788
AclWI	GGATC	2 cut(s)	762, 1022
AcoI	YGGCCR	1 cut(s)	68
AcsI	RAATTY	7 cut(s)	308, 501, 1050, 1398, 1860, 1871, 1992
AcuI	CTGAAG	2 cut(s)	125, 1152
AcvI	CACGTG	1 cut(s)	1525
AcyI	GRCGYC	1 cut(s)	1434
AdeI	CACNNNGTG	1 cut(s)	1852
AfaI	GTAC	5 cut(s)	204, 991, 1490, 1640, 1663
AfiI	CCNNNNNNNGG	2 cut(s)	527, 1411
AflIII	ACRYGT	1 cut(s)	544
AgeI	ACCGGT	1 cut(s)	1604
AhdI	GACNNNNNGTC	3 cut(s)	545, 548, 866
AhlI	ACTAGT	1 cut(s)	1769
AjnI	CCWGG	3 cut(s)	385, 1010, 1300
Alw21I	GWGCWC	2 cut(s)	1530, 1916
Alw26I	GTCTC	3 cut(s)	593, 1693, 1873
AlwI	GGATC	2 cut(s)	762, 1022
AoxI	GGCC	4 cut(s)	68, 510, 1454, 1514
ApeKI	GCWGC	5 cut(s)	904, 953, 1117, 1138, 1141
ApoI	RAATTY	7 cut(s)	308, 501, 1050, 1398, 1860, 1871, 1992
ArsI	GACNNNNNNTTYG	2 cut(s)	391, 423
AseI	ATTAAT	2 cut(s)	744, 2045
AsiGI	ACCGGT	1 cut(s)	1604
Asp700I	GAANNNNTTC	1 cut(s)	352
AspA2I	CCTAGG	1 cut(s)	224
AspLEI	GCGC	1 cut(s)	1182
AspS9I	GGNCC	3 cut(s)	1037, 1214, 1515
AsuC2I	CCSGG	1 cut(s)	1513
AvaII	GGWCC	2 cut(s)	1037, 1214
AvrII	CCTAGG	1 cut(s)	224
BanI	GGYRCC	1 cut(s)	1583
BanII	GRGCYC	1 cut(s)	1916
BarI	GAAGNNNNNNTAC	2 cut(s)	982, 1014
BauI	CACGAG	2 cut(s)	556, 1477
BbrPI	CACGTG	1 cut(s)	1525
BbsI	GAAGAC	1 cut(s)	705
Bbv12I	GWGCWC	2 cut(s)	1530, 1916
BbvI	GCAGC	5 cut(s)	891, 940, 1129, 1150, 1153
BccI	CCATC	6 cut(s)	871, 1267, 1286, 1598, 1725, 2014
BceAI	ACGGC	4 cut(s)	83, 95, 1441, 2178
BciT130I	CCWGG	3 cut(s)	387, 1012, 1302
BciVI	GTATCC	1 cut(s)	1202
BclI	TGATCA	1 cut(s)	1971
BcnI	CCSGG	1 cut(s)	1513
BcoDI	GTCTC	3 cut(s)	593, 1693, 1873
BcuI	ACTAGT	1 cut(s)	1769
BfaI	CTAG	6 cut(s)	225, 789, 1470, 1685, 1770, 1785
BfmI	CTRYAG	1 cut(s)	573
BfuAI	ACCTGC	1 cut(s)	796
BfuI	GTATCC	1 cut(s)	1202
BglII	AGATCT	1 cut(s)	193
BisI	GCNGC	5 cut(s)	905, 954, 1118, 1139, 1142
BlnI	CCTAGG	1 cut(s)	224
BlsI	GCNGC	5 cut(s)	906, 955, 1119, 1140, 1143
BmcAI	AGTACT	1 cut(s)	991
Bme1390I	CCNGG	4 cut(s)	387, 1012, 1302, 1513
Bme18I	GGWCC	2 cut(s)	1037, 1214
BmeRI	GACNNNNNGTC	3 cut(s)	545, 548, 866
BmgT120I	GGNCC	3 cut(s)	1037, 1214, 1515
BmiI	GGNNCC	4 cut(s)	583, 1039, 1517, 1585
BmrFI	CCNGG	4 cut(s)	387, 1012, 1302, 1513
BmsI	GCATC	4 cut(s)	1554, 1620, 1677, 2029
BpiI	GAAGAC	1 cut(s)	705
BpmI	CTGGAG	3 cut(s)	841, 978, 1371
BpuMI	CCSGG	1 cut(s)	1513
Bsa29I	ATCGAT	2 cut(s)	1671, 2037
BsaAI	YACGTR	1 cut(s)	1525
BsaHI	GRCGYC	1 cut(s)	1434
BsaI	GGTCTC	1 cut(s)	1873
BsaJI	CCNNGG	6 cut(s)	224, 605, 975, 1010, 1217, 1901
BsaWI	WCCGGW	1 cut(s)	1604
BsaXI	ACNNNNNCTCC	4 cut(s)	385, 415, 820, 850
Bsc4I	CCNNNNNNNGG	2 cut(s)	527, 1411
Bse118I	RCCGGY	4 cut(s)	648, 1556, 1580, 1604
Bse1I	ACTGG	2 cut(s)	1669, 1806
Bse3DI	GCAATG	5 cut(s)	590, 930, 1351, 1936, 1948
BseBI	CCWGG	3 cut(s)	387, 1012, 1302
BseCI	ATCGAT	2 cut(s)	1671, 2037
BseDI	CCNNGG	6 cut(s)	224, 605, 975, 1010, 1217, 1901
BseGI	GGATG	4 cut(s)	476, 1227, 1717, 1861
BseLI	CCNNNNNNNGG	2 cut(s)	527, 1411
BseMI	GCAATG	5 cut(s)	590, 930, 1351, 1936, 1948
BseMII	CTCAG	2 cut(s)	588, 681
BseNI	ACTGG	2 cut(s)	1669, 1806
BseXI	GCAGC	5 cut(s)	891, 940, 1129, 1150, 1153
BseYI	CCCAGC	1 cut(s)	680
BsgI	GTGCAG	1 cut(s)	2096
BshFI	GGCC	4 cut(s)	70, 512, 1456, 1516
BshNI	GGYRCC	1 cut(s)	1583
BshTI	ACCGGT	1 cut(s)	1604
BshVI	ATCGAT	2 cut(s)	1671, 2037
BsiHKAI	GWGCWC	2 cut(s)	1530, 1916
BsiSI	CCGG	6 cut(s)	649, 1513, 1557, 1581, 1605, 2063
BslFI	GGGAC	6 cut(s)	265, 743, 1023, 1334, 1495, 2155
BslI	CCNNNNNNNGG	2 cut(s)	527, 1411
BsmAI	GTCTC	3 cut(s)	593, 1693, 1873
BsmFI	GGGAC	6 cut(s)	265, 743, 1023, 1334, 1495, 2155
BsmI	GAATGC	2 cut(s)	682, 1247
BsnI	GGCC	4 cut(s)	70, 512, 1456, 1516
Bso31I	GGTCTC	1 cut(s)	1873
Bsp1286I	GDGCHC	2 cut(s)	1530, 1916
Bsp143I	GATC	9 cut(s)	193, 327, 626, 637, 754, 1014, 1045, 1595, 1971
Bsp19I	CCATGG	1 cut(s)	1901
BspACI	CCGC	2 cut(s)	586, 1788
BspANI	GGCC	4 cut(s)	70, 512, 1456, 1516
BspCNI	CTCAG	2 cut(s)	589, 682
BspDI	ATCGAT	2 cut(s)	1671, 2037
BspHI	TCATGA	1 cut(s)	757
BspLI	GGNNCC	4 cut(s)	583, 1039, 1517, 1585
BspMAI	CTGCAG	1 cut(s)	577
BspMI	ACCTGC	1 cut(s)	796
BspPI	GGATC	2 cut(s)	762, 1022
BspT107I	GGYRCC	1 cut(s)	1583
BspTNI	GGTCTC	1 cut(s)	1873
BsrBI	CCGCTC	1 cut(s)	588
BsrDI	GCAATG	5 cut(s)	590, 930, 1351, 1936, 1948
BsrFI	RCCGGY	4 cut(s)	648, 1556, 1580, 1604
BsrI	ACTGG	2 cut(s)	1669, 1806
BssAI	RCCGGY	4 cut(s)	648, 1556, 1580, 1604
BssECI	CCNNGG	6 cut(s)	224, 605, 975, 1010, 1217, 1901
BssMI	GATC	9 cut(s)	193, 327, 626, 637, 754, 1014, 1045, 1595, 1971
BssNI	GRCGYC	1 cut(s)	1434
BssSI	CACGAG	2 cut(s)	556, 1477
BssT1I	CCWWGG	5 cut(s)	224, 605, 975, 1217, 1901
Bst2BI	CACGAG	2 cut(s)	556, 1477
Bst2UI	CCWGG	3 cut(s)	387, 1012, 1302
Bst4CI	ACNGT	8 cut(s)	202, 296, 1037, 1214, 1464, 1574, 1842, 2018
Bst6I	CTCTTC	1 cut(s)	469
BstACI	GRCGYC	1 cut(s)	1434
BstBAI	YACGTR	1 cut(s)	1525
BstC8I	GCNNGC	3 cut(s)	147, 514, 1530
BstDEI	CTNAG	2 cut(s)	597, 690
BstDSI	CCRYGG	1 cut(s)	1901
BstF5I	GGATG	4 cut(s)	476, 1227, 1717, 1861
BstHHI	GCGC	1 cut(s)	1182
BstKTI	GATC	9 cut(s)	196, 330, 629, 640, 757, 1017, 1048, 1598, 1974
BstMAI	GTCTC	3 cut(s)	593, 1693, 1873
BstMBI	GATC	9 cut(s)	193, 327, 626, 637, 754, 1014, 1045, 1595, 1971
BstMWI	GCNNNNNNNGC	7 cut(s)	387, 953, 1117, 1147, 1274, 1607, 1616
BstNI	CCWGG	3 cut(s)	387, 1012, 1302
BstNSI	RCATGY	2 cut(s)	106, 548
BstSCI	CCNGG	4 cut(s)	385, 1010, 1300, 1511
BstSFI	CTRYAG	1 cut(s)	573
BstV1I	GCAGC	5 cut(s)	891, 940, 1129, 1150, 1153
BstV2I	GAAGAC	1 cut(s)	705
BstX2I	RGATCY	1 cut(s)	193
BstYI	RGATCY	1 cut(s)	193
Bsu15I	ATCGAT	2 cut(s)	1671, 2037
BsuI	GTATCC	1 cut(s)	1202
BsuRI	GGCC	4 cut(s)	70, 512, 1456, 1516
BsuTUI	ATCGAT	2 cut(s)	1671, 2037
BtgI	CCRYGG	1 cut(s)	1901
BtsCI	GGATG	4 cut(s)	476, 1227, 1717, 1861
BveI	ACCTGC	1 cut(s)	796
Cac8I	GCNNGC	3 cut(s)	147, 514, 1530
CciI	TCATGA	1 cut(s)	757
CfoI	GCGC	1 cut(s)	1182
Cfr10I	RCCGGY	4 cut(s)	648, 1556, 1580, 1604
Cfr13I	GGNCC	3 cut(s)	1037, 1214, 1515
ClaI	ATCGAT	2 cut(s)	1671, 2037
CseI	GACGC	1 cut(s)	1442
Csp6I	GTAC	5 cut(s)	203, 990, 1489, 1639, 1662
CspAI	ACCGGT	1 cut(s)	1604
CviAII	CATG	7 cut(s)	103, 391, 545, 565, 758, 1902, 2156
CviQI	GTAC	5 cut(s)	203, 990, 1489, 1639, 1662
DdeI	CTNAG	2 cut(s)	597, 690
DpnI	GATC	9 cut(s)	195, 329, 628, 639, 756, 1016, 1047, 1597, 1973
DpnII	GATC	9 cut(s)	193, 327, 626, 637, 754, 1014, 1045, 1595, 1971
DraI	TTTAAA	1 cut(s)	291
DraIII	CACNNNGTG	1 cut(s)	1852
DrdI	GACNNNNNNGTC	1 cut(s)	1685
DriI	GACNNNNNGTC	3 cut(s)	545, 548, 866
DseDI	GACNNNNNNGTC	1 cut(s)	1685
EaeI	YGGCCR	1 cut(s)	68
Eam1104I	CTCTTC	1 cut(s)	469
Eam1105I	GACNNNNNGTC	3 cut(s)	545, 548, 866
EarI	CTCTTC	1 cut(s)	469
Ecl136II	GAGCTC	1 cut(s)	1914
Eco130I	CCWWGG	5 cut(s)	224, 605, 975, 1217, 1901
Eco24I	GRGCYC	1 cut(s)	1916
Eco31I	GGTCTC	1 cut(s)	1873
Eco32I	GATATC	1 cut(s)	612
Eco47I	GGWCC	2 cut(s)	1037, 1214
Eco53kI	GAGCTC	1 cut(s)	1914
Eco57I	CTGAAG	2 cut(s)	125, 1152
Eco72I	CACGTG	1 cut(s)	1525
EcoICRI	GAGCTC	1 cut(s)	1914
EcoRII	CCWGG	3 cut(s)	385, 1010, 1300
EcoRV	GATATC	1 cut(s)	612
EcoT14I	CCWWGG	5 cut(s)	224, 605, 975, 1217, 1901
EcoT22I	ATGCAT	1 cut(s)	2044
EcoT38I	GRGCYC	1 cut(s)	1916
ErhI	CCWWGG	5 cut(s)	224, 605, 975, 1217, 1901
FaeI	CATG	7 cut(s)	106, 394, 548, 568, 761, 1905, 2159
FalI	AAGNNNNNCTT	2 cut(s)	337, 369
FaqI	GGGAC	6 cut(s)	265, 743, 1023, 1334, 1495, 2155
FatI	CATG	7 cut(s)	102, 390, 544, 564, 757, 1901, 2155
FauI	CCCGC	1 cut(s)	593
FbaI	TGATCA	1 cut(s)	1971
FblI	GTMKAC	2 cut(s)	552, 870
Fnu4HI	GCNGC	5 cut(s)	905, 954, 1118, 1139, 1142
FokI	GGATG	4 cut(s)	463, 1234, 1704, 1868
FriOI	GRGCYC	1 cut(s)	1916
Fsp4HI	GCNGC	5 cut(s)	905, 954, 1118, 1139, 1142
FspBI	CTAG	6 cut(s)	225, 789, 1470, 1685, 1770, 1785
GlaI	GCGC	1 cut(s)	1181
GluI	GCNGC	5 cut(s)	905, 954, 1118, 1139, 1142
GsaI	CCCAGC	1 cut(s)	684
GsuI	CTGGAG	3 cut(s)	841, 978, 1371
HaeIII	GGCC	4 cut(s)	70, 512, 1456, 1516
HapII	CCGG	6 cut(s)	649, 1513, 1557, 1581, 1605, 2063
HgaI	GACGC	1 cut(s)	1442
HhaI	GCGC	1 cut(s)	1182
Hin1I	GRCGYC	1 cut(s)	1434
Hin1II	CATG	7 cut(s)	106, 394, 548, 568, 761, 1905, 2159
Hin6I	GCGC	1 cut(s)	1180
HinP1I	GCGC	1 cut(s)	1180
HincII	GTYRAC	3 cut(s)	553, 871, 2014
HindII	GTYRAC	3 cut(s)	553, 871, 2014
HinfI	GANTC	8 cut(s)	239, 400, 601, 1020, 1028, 1255, 1650, 2066
HpaII	CCGG	6 cut(s)	649, 1513, 1557, 1581, 1605, 2063
Hpy166II	GTNNAC	4 cut(s)	553, 871, 1554, 2014
Hpy188I	TCNGA	9 cut(s)	247, 373, 631, 691, 1019, 1176, 1432, 1595, 1998
Hpy8I	GTNNAC	4 cut(s)	553, 871, 1554, 2014
Hpy99I	CGWCG	1 cut(s)	554
HpyCH4III	ACNGT	8 cut(s)	202, 296, 1037, 1214, 1464, 1574, 1842, 2018
HpyCH4IV	ACGT	6 cut(s)	633, 765, 1450, 1487, 1524, 1641
HpyF10VI	GCNNNNNNNGC	7 cut(s)	387, 953, 1117, 1147, 1274, 1607, 1616
HpyF3I	CTNAG	2 cut(s)	597, 690
HpySE526I	ACGT	6 cut(s)	633, 765, 1450, 1487, 1524, 1641
Hsp92I	GRCGYC	1 cut(s)	1434
Hsp92II	CATG	7 cut(s)	106, 394, 548, 568, 761, 1905, 2159
HspAI	GCGC	1 cut(s)	1180
Ksp22I	TGATCA	1 cut(s)	1971
Kzo9I	GATC	9 cut(s)	193, 327, 626, 637, 754, 1014, 1045, 1595, 1971
LmnI	GCTCC	1 cut(s)	1616
Lsp1109I	GCAGC	5 cut(s)	891, 940, 1129, 1150, 1153
LweI	GCATC	4 cut(s)	1554, 1620, 1677, 2029
MaeI	CTAG	6 cut(s)	225, 789, 1470, 1685, 1770, 1785
MaeII	ACGT	6 cut(s)	633, 765, 1450, 1487, 1524, 1641
MaeIII	GTNAC	8 cut(s)	560, 779, 1304, 1458, 1574, 1642, 1836, 1906
MalI	GATC	9 cut(s)	195, 329, 628, 639, 756, 1016, 1047, 1597, 1973
MbiI	CCGCTC	1 cut(s)	588
MboI	GATC	9 cut(s)	193, 327, 626, 637, 754, 1014, 1045, 1595, 1971
MfeI	CAATTG	2 cut(s)	119, 357
MflI	RGATCY	1 cut(s)	193
MhlI	GDGCHC	2 cut(s)	1530, 1916
MlyI	GAGTC	4 cut(s)	394, 595, 1037, 1264
MmeI	TCCRAC	2 cut(s)	937, 1056
Mph1103I	ATGCAT	1 cut(s)	2044
MroXI	GAANNNNTTC	1 cut(s)	352
MseI	TTAA	5 cut(s)	290, 734, 744, 1895, 2045
MslI	CAYNNNNRTG	1 cut(s)	1941
MspI	CCGG	6 cut(s)	649, 1513, 1557, 1581, 1605, 2063
MspR9I	CCNGG	4 cut(s)	387, 1012, 1302, 1513
MunI	CAATTG	2 cut(s)	119, 357
Mva1269I	GAATGC	2 cut(s)	682, 1247
MvaI	CCWGG	3 cut(s)	387, 1012, 1302
MwoI	GCNNNNNNNGC	7 cut(s)	387, 953, 1117, 1147, 1274, 1607, 1616
NciI	CCSGG	1 cut(s)	1513
NcoI	CCATGG	1 cut(s)	1901
NdeII	GATC	9 cut(s)	193, 327, 626, 637, 754, 1014, 1045, 1595, 1971
NlaIII	CATG	7 cut(s)	106, 394, 548, 568, 761, 1905, 2159
NlaIV	GGNNCC	4 cut(s)	583, 1039, 1517, 1585
NmuCI	GTSAC	5 cut(s)	560, 779, 1304, 1458, 1642
NsiI	ATGCAT	1 cut(s)	2044
NspI	RCATGY	2 cut(s)	106, 548
PagI	TCATGA	1 cut(s)	757
PaqCI	CACCTGC	1 cut(s)	796
PciI	ACATGT	1 cut(s)	544
PcsI	WCGNNNNNNNCGW	2 cut(s)	1484, 2034
PctI	GAATGC	2 cut(s)	682, 1247
PdmI	GAANNNNTTC	1 cut(s)	352
PfeI	GAWTC	4 cut(s)	239, 1020, 1650, 2066
PinAI	ACCGGT	1 cut(s)	1604
PkrI	GCNGC	5 cut(s)	906, 955, 1119, 1140, 1143
PleI	GAGTC	4 cut(s)	394, 595, 1036, 1263
PmaCI	CACGTG	1 cut(s)	1525
PmlI	CACGTG	1 cut(s)	1525
PpsI	GAGTC	4 cut(s)	394, 595, 1036, 1263
Ppu21I	YACGTR	1 cut(s)	1525
PscI	ACATGT	1 cut(s)	544
PshBI	ATTAAT	2 cut(s)	744, 2045
Psp124BI	GAGCTC	1 cut(s)	1916
Psp6I	CCWGG	3 cut(s)	385, 1010, 1300
PspCI	CACGTG	1 cut(s)	1525
PspFI	CCCAGC	1 cut(s)	680
PspGI	CCWGG	3 cut(s)	385, 1010, 1300
PspN4I	GGNNCC	4 cut(s)	583, 1039, 1517, 1585
PspPI	GGNCC	3 cut(s)	1037, 1214, 1515
PstI	CTGCAG	1 cut(s)	577
PsuI	RGATCY	1 cut(s)	193
RsaI	GTAC	5 cut(s)	204, 991, 1490, 1640, 1663
RsaNI	GTAC	5 cut(s)	203, 990, 1489, 1639, 1662
RseI	CAYNNNNRTG	1 cut(s)	1941
SacI	GAGCTC	1 cut(s)	1916
SalI	GTCGAC	2 cut(s)	551, 869
SaqAI	TTAA	5 cut(s)	290, 734, 744, 1895, 2045
SatI	GCNGC	5 cut(s)	905, 954, 1118, 1139, 1142
Sau3AI	GATC	9 cut(s)	193, 327, 626, 637, 754, 1014, 1045, 1595, 1971
Sau96I	GGNCC	3 cut(s)	1037, 1214, 1515
ScaI	AGTACT	1 cut(s)	991
SchI	GAGTC	4 cut(s)	394, 595, 1037, 1264
ScrFI	CCNGG	4 cut(s)	387, 1012, 1302, 1513
SduI	GDGCHC	2 cut(s)	1530, 1916
SfaNI	GCATC	4 cut(s)	1554, 1620, 1677, 2029
SfcI	CTRYAG	1 cut(s)	573
SgrAI	CRCCGGYG	1 cut(s)	1604
SinI	GGWCC	2 cut(s)	1037, 1214
SmiMI	CAYNNNNRTG	1 cut(s)	1941
SpeI	ACTAGT	1 cut(s)	1769
SsiI	CCGC	2 cut(s)	586, 1788
SspI	AATATT	1 cut(s)	1924
SspMI	CTAG	6 cut(s)	225, 789, 1470, 1685, 1770, 1785
SstI	GAGCTC	1 cut(s)	1916
StyD4I	CCNGG	4 cut(s)	385, 1010, 1300, 1511
StyI	CCWWGG	5 cut(s)	224, 605, 975, 1217, 1901
TaaI	ACNGT	8 cut(s)	202, 296, 1037, 1214, 1464, 1574, 1842, 2018
TaiI	ACGT	6 cut(s)	636, 768, 1453, 1490, 1527, 1644
TaqI	TCGA	9 cut(s)	552, 870, 1445, 1671, 1725, 1749, 2028, 2037, 2049
TatI	WGTACW	1 cut(s)	989
TfiI	GAWTC	4 cut(s)	239, 1020, 1650, 2066
Tru1I	TTAA	5 cut(s)	290, 734, 744, 1895, 2045
Tru9I	TTAA	5 cut(s)	290, 734, 744, 1895, 2045
TseFI	GTSAC	5 cut(s)	560, 779, 1304, 1458, 1642
TseI	GCWGC	5 cut(s)	904, 953, 1117, 1138, 1141
Tsp45I	GTSAC	5 cut(s)	560, 779, 1304, 1458, 1642
TspDTI	ATGAA	9 cut(s)	231, 246, 357, 462, 581, 705, 1238, 1872, 2172
TspGWI	ACGGA	1 cut(s)	594
VpaK11BI	GGWCC	2 cut(s)	1037, 1214
VspI	ATTAAT	2 cut(s)	744, 2045
XapI	RAATTY	7 cut(s)	308, 501, 1050, 1398, 1860, 1871, 1992
XceI	RCATGY	2 cut(s)	106, 548
XmaJI	CCTAGG	1 cut(s)	224
XmiI	GTMKAC	2 cut(s)	552, 870
XmnI	GAANNNNTTC	1 cut(s)	352
XspI	CTAG	6 cut(s)	225, 789, 1470, 1685, 1770, 1785
ZrmI	AGTACT	1 cut(s)	991
Zsp2I	ATGCAT	1 cut(s)	2044

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.