DUF761-associated sequence motif
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G62170 AT5G62170 AT5G62170 AT5G62170 |
| fragaria_vesca | FvH4_7g28730 FvH4_7g28730 |
| malus_domestica | MD00G1004300.v1.1 MD01G1193200.v1.1 |
| prunus_persica | Prupe.2G287400_v2.0.a1 Prupe.2G287400_v2.0.a1 |
| pyrus_communis | pycom01g20380 pycom07g23950 |
| rosa_chinensis | RchiOBHm_Chr1g0376241 |
| rosa_laevigata | RLG00000026617 |
| rosa_multiflora | Rmu_co8277139.1_g000001 Rmu_ssc0000116.1_g000057 |
| rosa_roxburghii | Rroxscaffold_4G00282280 |
| rosa_rugosa | Rorug01G0394700 Rorug01G0394800 |
| rosa_samantha | Rh1AG406200 Rh1BG369900 Rh1CG382800 Rh1DG399700 |
| rosa_wichuraiana | Rw1G036040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 235 |
| AatII | GACGTC | 1 cut(s) | 801 |
| Acc36I | ACCTGC | 1 cut(s) | 518 |
| AccB1I | GGYRCC | 1 cut(s) | 1832 |
| AccI | GTMKAC | 2 cut(s) | 795, 1695 |
| AciI | CCGC | 6 cut(s) | 598, 1079, 1292, 1440, 1443, 1626 |
| AclWI | GGATC | 1 cut(s) | 1792 |
| AcsI | RAATTY | 4 cut(s) | 999, 1701, 1713, 1769 |
| AcuI | CTGAAG | 2 cut(s) | 104, 593 |
| AcyI | GRCGYC | 2 cut(s) | 798, 1833 |
| AfaI | GTAC | 5 cut(s) | 532, 1358, 1425, 1502, 1525 |
| AgeI | ACCGGT | 1 cut(s) | 1454 |
| AgsI | TTSAA | 9 cut(s) | 191, 453, 466, 520, 853, 1004, 1040, 1147, 1925 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 357 |
| AhlI | ACTAGT | 1 cut(s) | 1757 |
| AjnI | CCWGG | 1 cut(s) | 340 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 427, 459, 773, 805, 990, 1022 |
| AleI | CACNNNNGTG | 1 cut(s) | 1979 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 337, 369 |
| Alw21I | GWGCWC | 5 cut(s) | 91, 1198, 1395, 1497, 1986 |
| Alw26I | GTCTC | 7 cut(s) | 54, 542, 699, 761, 819, 1439, 1714 |
| Alw44I | GTGCAC | 1 cut(s) | 1982 |
| AlwI | GGATC | 1 cut(s) | 1792 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 333, 1345 |
| Ama87I | CYCGRG | 3 cut(s) | 727, 1381, 1401 |
| AoxI | GGCC | 4 cut(s) | 482, 930, 1086, 1657 |
| ApaLI | GTGCAC | 1 cut(s) | 1982 |
| ApeKI | GCWGC | 9 cut(s) | 327, 330, 333, 524, 685, 1201, 1342, 1345, 1397 |
| ApoI | RAATTY | 4 cut(s) | 999, 1701, 1713, 1769 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1692, 1724 |
| AseI | ATTAAT | 1 cut(s) | 374 |
| AsiGI | ACCGGT | 1 cut(s) | 1454 |
| AspLEI | GCGC | 2 cut(s) | 1463, 1835 |
| AspS9I | GGNCC | 1 cut(s) | 994 |
| AsuC2I | CCSGG | 2 cut(s) | 879, 1830 |
| AsuHPI | GGTGA | 8 cut(s) | 330, 581, 830, 1281, 1549, 1615, 1634, 1954 |
| AsuII | TTCGAA | 1 cut(s) | 1892 |
| AvaI | CYCGRG | 3 cut(s) | 727, 1381, 1401 |
| AvaII | GGWCC | 1 cut(s) | 994 |
| AxyI | CCTNAGG | 2 cut(s) | 1083, 1661 |
| BaeGI | GKGCMC | 1 cut(s) | 1986 |
| BanI | GGYRCC | 1 cut(s) | 1832 |
| BanII | GRGCYC | 2 cut(s) | 728, 1198 |
| BauI | CACGAG | 2 cut(s) | 1333, 1507 |
| BbsI | GAAGAC | 1 cut(s) | 1620 |
| Bbv12I | GWGCWC | 5 cut(s) | 91, 1198, 1395, 1497, 1986 |
| BbvI | GCAGC | 9 cut(s) | 320, 339, 342, 536, 672, 1213, 1332, 1354, 1384 |
| BccI | CCATC | 6 cut(s) | 35, 120, 895, 947, 1183, 1948 |
| BceAI | ACGGC | 5 cut(s) | 617, 1197, 1506, 1827, 2007 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1372, 1406 |
| BciT130I | CCWGG | 1 cut(s) | 342 |
| BclI | TGATCA | 1 cut(s) | 586 |
| BcnI | CCSGG | 2 cut(s) | 879, 1830 |
| BcoDI | GTCTC | 7 cut(s) | 54, 542, 699, 761, 819, 1439, 1714 |
| BcuI | ACTAGT | 1 cut(s) | 1757 |
| BfmI | CTRYAG | 2 cut(s) | 963, 1346 |
| BfoI | RGCGCY | 2 cut(s) | 1464, 1836 |
| BfuAI | ACCTGC | 1 cut(s) | 518 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 1527, 1656 |
| BglII | AGATCT | 1 cut(s) | 166 |
| BlpI | GCTNAGC | 1 cut(s) | 1197 |
| Bme1390I | CCNGG | 3 cut(s) | 342, 879, 1830 |
| Bme18I | GGWCC | 1 cut(s) | 994 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 357 |
| BmeT110I | CYCGRG | 3 cut(s) | 727, 1381, 1401 |
| BmgT120I | GGNCC | 1 cut(s) | 994 |
| BmiI | GGNNCC | 3 cut(s) | 725, 1185, 1834 |
| BmrFI | CCNGG | 3 cut(s) | 342, 879, 1830 |
| BpiI | GAAGAC | 1 cut(s) | 1620 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 816, 848 |
| BpmI | CTGGAG | 1 cut(s) | 1481 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1197 |
| Bpu14I | TTCGAA | 1 cut(s) | 1892 |
| BpuEI | CTTGAG | 2 cut(s) | 674, 1721 |
| BpuMI | CCSGG | 2 cut(s) | 879, 1830 |
| BsaBI | GATNNNNATC | 1 cut(s) | 111 |
| BsaHI | GRCGYC | 2 cut(s) | 798, 1833 |
| BsaI | GGTCTC | 4 cut(s) | 699, 819, 1439, 1714 |
| BsaJI | CCNNGG | 4 cut(s) | 197, 911, 1402, 1742 |
| BsaWI | WCCGGW | 3 cut(s) | 544, 1454, 1671 |
| Bse118I | RCCGGY | 2 cut(s) | 1294, 1454 |
| Bse1I | ACTGG | 3 cut(s) | 1498, 1531, 1568 |
| Bse21I | CCTNAGG | 2 cut(s) | 1083, 1661 |
| Bse3DI | GCAATG | 1 cut(s) | 1211 |
| Bse8I | GATNNNNATC | 1 cut(s) | 111 |
| BseBI | CCWGG | 1 cut(s) | 342 |
| BseDI | CCNNGG | 4 cut(s) | 197, 911, 1402, 1742 |
| BseJI | GATNNNNATC | 1 cut(s) | 111 |
| BseMI | GCAATG | 1 cut(s) | 1211 |
| BseMII | CTCAG | 4 cut(s) | 210, 931, 1097, 1211 |
| BseNI | ACTGG | 3 cut(s) | 1498, 1531, 1568 |
| BseRI | GAGGAG | 7 cut(s) | 63, 656, 736, 821, 1366, 1369, 1973 |
| BseSI | GKGCMC | 1 cut(s) | 1986 |
| BseXI | GCAGC | 9 cut(s) | 320, 339, 342, 536, 672, 1213, 1332, 1354, 1384 |
| BshFI | GGCC | 4 cut(s) | 484, 932, 1088, 1659 |
| BshNI | GGYRCC | 1 cut(s) | 1832 |
| BshTI | ACCGGT | 1 cut(s) | 1454 |
| BsiHKAI | GWGCWC | 5 cut(s) | 91, 1198, 1395, 1497, 1986 |
| BsiHKCI | CYCGRG | 3 cut(s) | 727, 1381, 1401 |
| BsiSI | CCGG | 7 cut(s) | 545, 879, 1295, 1455, 1672, 1829, 1886 |
| BslFI | GGGAC | 2 cut(s) | 241, 1561 |
| BsmAI | GTCTC | 7 cut(s) | 54, 542, 699, 761, 819, 1439, 1714 |
| BsmFI | GGGAC | 2 cut(s) | 241, 1561 |
| BsnI | GGCC | 4 cut(s) | 484, 932, 1088, 1659 |
| Bso31I | GGTCTC | 4 cut(s) | 699, 819, 1439, 1714 |
| BsoBI | CYCGRG | 3 cut(s) | 727, 1381, 1401 |
| Bsp119I | TTCGAA | 1 cut(s) | 1892 |
| Bsp1286I | GDGCHC | 6 cut(s) | 91, 728, 1198, 1395, 1497, 1986 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1197 |
| Bsp19I | CCATGG | 1 cut(s) | 1742 |
| BspACI | CCGC | 6 cut(s) | 598, 1079, 1292, 1440, 1443, 1626 |
| BspANI | GGCC | 4 cut(s) | 484, 932, 1088, 1659 |
| BspCNI | CTCAG | 4 cut(s) | 211, 930, 1096, 1210 |
| BspLI | GGNNCC | 3 cut(s) | 725, 1185, 1834 |
| BspMAI | CTGCAG | 1 cut(s) | 1350 |
| BspMI | ACCTGC | 1 cut(s) | 518 |
| BspPI | GGATC | 1 cut(s) | 1792 |
| BspQI | GCTCTTC | 3 cut(s) | 10, 107, 1097 |
| BspT104I | TTCGAA | 1 cut(s) | 1892 |
| BspT107I | GGYRCC | 1 cut(s) | 1832 |
| BspTNI | GGTCTC | 4 cut(s) | 699, 819, 1439, 1714 |
| BsrDI | GCAATG | 1 cut(s) | 1211 |
| BsrFI | RCCGGY | 2 cut(s) | 1294, 1454 |
| BsrI | ACTGG | 3 cut(s) | 1498, 1531, 1568 |
| BssAI | RCCGGY | 2 cut(s) | 1294, 1454 |
| BssECI | CCNNGG | 4 cut(s) | 197, 911, 1402, 1742 |
| BssNI | GRCGYC | 2 cut(s) | 798, 1833 |
| BssSI | CACGAG | 2 cut(s) | 1333, 1507 |
| BssT1I | CCWWGG | 3 cut(s) | 197, 911, 1742 |
| Bst2BI | CACGAG | 2 cut(s) | 1333, 1507 |
| Bst2UI | CCWGG | 1 cut(s) | 342 |
| Bst4CI | ACNGT | 5 cut(s) | 272, 316, 772, 1320, 1433 |
| Bst6I | CTCTTC | 7 cut(s) | 10, 20, 107, 418, 483, 1097, 1269 |
| BstACI | GRCGYC | 2 cut(s) | 798, 1833 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 333 |
| BstBI | TTCGAA | 1 cut(s) | 1892 |
| BstC8I | GCNNGC | 4 cut(s) | 1296, 1340, 1395, 1652 |
| BstDEI | CTNAG | 5 cut(s) | 219, 917, 1083, 1197, 1661 |
| BstDSI | CCRYGG | 1 cut(s) | 1742 |
| BstH2I | RGCGCY | 2 cut(s) | 1464, 1836 |
| BstHHI | GCGC | 2 cut(s) | 1463, 1835 |
| BstMAI | GTCTC | 7 cut(s) | 54, 542, 699, 761, 819, 1439, 1714 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 333, 1527, 1656, 1665, 1830, 1839 |
| BstNI | CCWGG | 1 cut(s) | 342 |
| BstNSI | RCATGY | 1 cut(s) | 85 |
| BstSCI | CCNGG | 3 cut(s) | 340, 877, 1828 |
| BstSFI | CTRYAG | 2 cut(s) | 963, 1346 |
| BstSLI | GKGCMC | 1 cut(s) | 1986 |
| BstV1I | GCAGC | 9 cut(s) | 320, 339, 342, 536, 672, 1213, 1332, 1354, 1384 |
| BstV2I | GAAGAC | 1 cut(s) | 1620 |
| BstX2I | RGATCY | 1 cut(s) | 166 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 716 |
| BstYI | RGATCY | 1 cut(s) | 166 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1083, 1661 |
| BsuRI | GGCC | 4 cut(s) | 484, 932, 1088, 1659 |
| BtgI | CCRYGG | 1 cut(s) | 1742 |
| BtsI | GCAGTG | 1 cut(s) | 1061 |
| BtsIMutI | CAGTG | 1 cut(s) | 1061 |
| BveI | ACCTGC | 1 cut(s) | 518 |
| Cac8I | GCNNGC | 4 cut(s) | 1296, 1340, 1395, 1652 |
| CaiI | CAGNNNCTG | 2 cut(s) | 333, 1345 |
| CfoI | GCGC | 2 cut(s) | 1463, 1835 |
| Cfr10I | RCCGGY | 2 cut(s) | 1294, 1454 |
| Cfr13I | GGNCC | 1 cut(s) | 994 |
| CseI | GACGC | 1 cut(s) | 878 |
| Csp6I | GTAC | 5 cut(s) | 531, 1357, 1424, 1501, 1524 |
| CspAI | ACCGGT | 1 cut(s) | 1454 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 286, 321 |
| CviAII | CATG | 4 cut(s) | 82, 710, 1688, 1743 |
| CviQI | GTAC | 5 cut(s) | 531, 1357, 1424, 1501, 1524 |
| DdeI | CTNAG | 5 cut(s) | 219, 917, 1083, 1197, 1661 |
| DinI | GGCGCC | 1 cut(s) | 1834 |
| DraI | TTTAAA | 2 cut(s) | 267, 673 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 235 |
| DriI | GACNNNNNGTC | 1 cut(s) | 357 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 235 |
| Eam1104I | CTCTTC | 7 cut(s) | 10, 20, 107, 418, 483, 1097, 1269 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 357 |
| EarI | CTCTTC | 7 cut(s) | 10, 20, 107, 418, 483, 1097, 1269 |
| Ecl136II | GAGCTC | 1 cut(s) | 1196 |
| Eco130I | CCWWGG | 3 cut(s) | 197, 911, 1742 |
| Eco24I | GRGCYC | 2 cut(s) | 728, 1198 |
| Eco31I | GGTCTC | 4 cut(s) | 699, 819, 1439, 1714 |
| Eco47I | GGWCC | 1 cut(s) | 994 |
| Eco53kI | GAGCTC | 1 cut(s) | 1196 |
| Eco57I | CTGAAG | 2 cut(s) | 104, 593 |
| Eco81I | CCTNAGG | 2 cut(s) | 1083, 1661 |
| Eco88I | CYCGRG | 3 cut(s) | 727, 1381, 1401 |
| EcoICRI | GAGCTC | 1 cut(s) | 1196 |
| EcoRII | CCWGG | 1 cut(s) | 340 |
| EcoT14I | CCWWGG | 3 cut(s) | 197, 911, 1742 |
| EcoT38I | GRGCYC | 2 cut(s) | 728, 1198 |
| EgeI | GGCGCC | 1 cut(s) | 1834 |
| EheI | GGCGCC | 1 cut(s) | 1834 |
| ErhI | CCWWGG | 3 cut(s) | 197, 911, 1742 |
| FaeI | CATG | 4 cut(s) | 85, 713, 1691, 1746 |
| FaqI | GGGAC | 2 cut(s) | 241, 1561 |
| FatI | CATG | 4 cut(s) | 81, 709, 1687, 1742 |
| FbaI | TGATCA | 1 cut(s) | 586 |
| FblI | GTMKAC | 2 cut(s) | 795, 1695 |
| FriOI | GRGCYC | 2 cut(s) | 728, 1198 |
| GlaI | GCGC | 2 cut(s) | 1462, 1834 |
| GsuI | CTGGAG | 1 cut(s) | 1481 |
| HaeII | RGCGCY | 2 cut(s) | 1464, 1836 |
| HaeIII | GGCC | 4 cut(s) | 484, 932, 1088, 1659 |
| HapII | CCGG | 7 cut(s) | 545, 879, 1295, 1455, 1672, 1829, 1886 |
| HgaI | GACGC | 1 cut(s) | 878 |
| HhaI | GCGC | 2 cut(s) | 1463, 1835 |
| Hin1I | GRCGYC | 2 cut(s) | 798, 1833 |
| Hin1II | CATG | 4 cut(s) | 85, 713, 1691, 1746 |
| Hin6I | GCGC | 2 cut(s) | 1461, 1833 |
| HinP1I | GCGC | 2 cut(s) | 1461, 1833 |
| HincII | GTYRAC | 2 cut(s) | 796, 1120 |
| HindII | GTYRAC | 2 cut(s) | 796, 1120 |
| HinfI | GANTC | 9 cut(s) | 212, 352, 398, 466, 550, 730, 1351, 1616, 1889 |
| HpaII | CCGG | 7 cut(s) | 545, 879, 1295, 1455, 1672, 1829, 1886 |
| HphI | GGTGA | 8 cut(s) | 330, 581, 830, 1281, 1549, 1615, 1634, 1954 |
| Hpy166II | GTNNAC | 5 cut(s) | 796, 1120, 1557, 1696, 1984 |
| Hpy188I | TCNGA | 9 cut(s) | 220, 282, 322, 580, 612, 920, 928, 1101, 1272 |
| Hpy188III | TCNNGA | 9 cut(s) | 383, 395, 691, 824, 1228, 1276, 1507, 1819, 1850 |
| Hpy8I | GTNNAC | 5 cut(s) | 796, 1120, 1557, 1696, 1984 |
| Hpy99I | CGWCG | 5 cut(s) | 800, 1127, 1421, 1865, 1877 |
| HpyAV | CCTTC | 9 cut(s) | 218, 398, 495, 673, 906, 1174, 1296, 1888, 1925 |
| HpyCH4III | ACNGT | 5 cut(s) | 272, 316, 772, 1320, 1433 |
| HpyCH4IV | ACGT | 4 cut(s) | 582, 798, 1419, 1503 |
| HpyCH4V | TGCA | 8 cut(s) | 81, 990, 1066, 1209, 1348, 1668, 1900, 1984 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 333, 1527, 1656, 1665, 1830, 1839 |
| HpyF3I | CTNAG | 5 cut(s) | 219, 917, 1083, 1197, 1661 |
| HpySE526I | ACGT | 4 cut(s) | 582, 798, 1419, 1503 |
| Hsp92I | GRCGYC | 2 cut(s) | 798, 1833 |
| Hsp92II | CATG | 4 cut(s) | 85, 713, 1691, 1746 |
| HspAI | GCGC | 2 cut(s) | 1461, 1833 |
| KasI | GGCGCC | 1 cut(s) | 1832 |
| KroI | GCCGGC | 1 cut(s) | 1294 |
| KroNI | GCCGGC | 1 cut(s) | 1296 |
| Ksp22I | TGATCA | 1 cut(s) | 586 |
| LguI | GCTCTTC | 3 cut(s) | 10, 107, 1097 |
| LmnI | GCTCC | 5 cut(s) | 682, 723, 911, 1189, 1500 |
| Lsp1109I | GCAGC | 9 cut(s) | 320, 339, 342, 536, 672, 1213, 1332, 1354, 1384 |
| MaeII | ACGT | 4 cut(s) | 582, 798, 1419, 1503 |
| MaeIII | GTNAC | 5 cut(s) | 540, 731, 799, 1504, 1775 |
| MflI | RGATCY | 1 cut(s) | 166 |
| MhlI | GDGCHC | 6 cut(s) | 91, 728, 1198, 1395, 1497, 1986 |
| MluCI | AATT | 9 cut(s) | 130, 848, 999, 1095, 1113, 1142, 1701, 1713, 1769 |
| Mly113I | GGCGCC | 1 cut(s) | 1833 |
| MlyI | GAGTC | 5 cut(s) | 346, 544, 739, 1360, 1610 |
| MmeI | TCCRAC | 4 cut(s) | 313, 627, 906, 1456 |
| MreI | CGCCGGCG | 1 cut(s) | 1294 |
| MroNI | GCCGGC | 1 cut(s) | 1294 |
| MseI | TTAA | 4 cut(s) | 266, 374, 428, 672 |
| MslI | CAYNNNNRTG | 2 cut(s) | 714, 1979 |
| MspA1I | CMGCKG | 2 cut(s) | 333, 1345 |
| MspI | CCGG | 7 cut(s) | 545, 879, 1295, 1455, 1672, 1829, 1886 |
| MspR9I | CCNGG | 3 cut(s) | 342, 879, 1830 |
| MssI | GTTTAAAC | 1 cut(s) | 267 |
| MvaI | CCWGG | 1 cut(s) | 342 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 333, 1527, 1656, 1665, 1830, 1839 |
| NaeI | GCCGGC | 1 cut(s) | 1296 |
| NarI | GGCGCC | 1 cut(s) | 1833 |
| NciI | CCSGG | 2 cut(s) | 879, 1830 |
| NcoI | CCATGG | 1 cut(s) | 1742 |
| NgoMIV | GCCGGC | 1 cut(s) | 1294 |
| NlaIII | CATG | 4 cut(s) | 85, 713, 1691, 1746 |
| NlaIV | GGNNCC | 3 cut(s) | 725, 1185, 1834 |
| NmeAIII | GCCGAG | 1 cut(s) | 1635 |
| NmuCI | GTSAC | 3 cut(s) | 731, 799, 1504 |
| NspI | RCATGY | 1 cut(s) | 85 |
| NspV | TTCGAA | 1 cut(s) | 1892 |
| OliI | CACNNNNGTG | 1 cut(s) | 1979 |
| PaeR7I | CTCGAG | 1 cut(s) | 1381 |
| PciSI | GCTCTTC | 3 cut(s) | 10, 107, 1097 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1869 |
| PdiI | GCCGGC | 1 cut(s) | 1296 |
| PfeI | GAWTC | 4 cut(s) | 212, 398, 466, 1889 |
| PfoI | TCCNGGA | 1 cut(s) | 877 |
| PinAI | ACCGGT | 1 cut(s) | 1454 |
| PleI | GAGTC | 5 cut(s) | 346, 544, 738, 1359, 1610 |
| PluTI | GGCGCC | 1 cut(s) | 1836 |
| PmeI | GTTTAAAC | 1 cut(s) | 267 |
| PpsI | GAGTC | 5 cut(s) | 346, 544, 738, 1359, 1610 |
| PshBI | ATTAAT | 1 cut(s) | 374 |
| Psp124BI | GAGCTC | 1 cut(s) | 1198 |
| Psp6I | CCWGG | 1 cut(s) | 340 |
| PspGI | CCWGG | 1 cut(s) | 340 |
| PspN4I | GGNNCC | 3 cut(s) | 725, 1185, 1834 |
| PspPI | GGNCC | 1 cut(s) | 994 |
| PspXI | VCTCGAGB | 1 cut(s) | 1381 |
| PstI | CTGCAG | 1 cut(s) | 1350 |
| PstNI | CAGNNNCTG | 2 cut(s) | 333, 1345 |
| PsuI | RGATCY | 1 cut(s) | 166 |
| PvuII | CAGCTG | 2 cut(s) | 333, 1345 |
| RsaI | GTAC | 5 cut(s) | 532, 1358, 1425, 1502, 1525 |
| RsaNI | GTAC | 5 cut(s) | 531, 1357, 1424, 1501, 1524 |
| RseI | CAYNNNNRTG | 2 cut(s) | 714, 1979 |
| SacI | GAGCTC | 1 cut(s) | 1198 |
| SalI | GTCGAC | 1 cut(s) | 794 |
| SapI | GCTCTTC | 3 cut(s) | 10, 107, 1097 |
| SaqAI | TTAA | 4 cut(s) | 266, 374, 428, 672 |
| Sau96I | GGNCC | 1 cut(s) | 994 |
| SchI | GAGTC | 5 cut(s) | 346, 544, 739, 1360, 1610 |
| ScrFI | CCNGG | 3 cut(s) | 342, 879, 1830 |
| SduI | GDGCHC | 6 cut(s) | 91, 728, 1198, 1395, 1497, 1986 |
| SfcI | CTRYAG | 2 cut(s) | 963, 1346 |
| SfoI | GGCGCC | 1 cut(s) | 1834 |
| Sfr274I | CTCGAG | 1 cut(s) | 1381 |
| SfuI | TTCGAA | 1 cut(s) | 1892 |
| SgrAI | CRCCGGYG | 2 cut(s) | 1294, 1454 |
| SinI | GGWCC | 1 cut(s) | 994 |
| SlaI | CTCGAG | 1 cut(s) | 1381 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 714, 1979 |
| SmlI | CTYRAG | 3 cut(s) | 689, 1381, 1736 |
| SmoI | CTYRAG | 3 cut(s) | 689, 1381, 1736 |
| SpeI | ACTAGT | 1 cut(s) | 1757 |
| Sse9I | AATT | 9 cut(s) | 130, 848, 999, 1095, 1113, 1142, 1701, 1713, 1769 |
| SsiI | CCGC | 6 cut(s) | 598, 1079, 1292, 1440, 1443, 1626 |
| SspDI | GGCGCC | 1 cut(s) | 1832 |
| SspI | AATATT | 1 cut(s) | 1515 |
| SstI | GAGCTC | 1 cut(s) | 1198 |
| StyD4I | CCNGG | 3 cut(s) | 340, 877, 1828 |
| StyI | CCWWGG | 3 cut(s) | 197, 911, 1742 |
| TaaI | ACNGT | 5 cut(s) | 272, 316, 772, 1320, 1433 |
| TaiI | ACGT | 4 cut(s) | 585, 801, 1422, 1506 |
| TasI | AATT | 9 cut(s) | 130, 848, 999, 1095, 1113, 1142, 1701, 1713, 1769 |
| TatI | WGTACW | 1 cut(s) | 1356 |
| TauI | GCSGC | 3 cut(s) | 1081, 1442, 1445 |
| TfiI | GAWTC | 4 cut(s) | 212, 398, 466, 1889 |
| Tru1I | TTAA | 4 cut(s) | 266, 374, 428, 672 |
| Tru9I | TTAA | 4 cut(s) | 266, 374, 428, 672 |
| TscAI | CASTG | 1 cut(s) | 1068 |
| TseFI | GTSAC | 3 cut(s) | 731, 799, 1504 |
| TseI | GCWGC | 9 cut(s) | 327, 330, 333, 524, 685, 1201, 1342, 1345, 1397 |
| Tsp45I | GTSAC | 3 cut(s) | 731, 799, 1504 |
| TspDTI | ATGAA | 4 cut(s) | 204, 222, 411, 1676 |
| TspGWI | ACGGA | 1 cut(s) | 1563 |
| TspRI | CASTG | 1 cut(s) | 1068 |
| VneI | GTGCAC | 1 cut(s) | 1982 |
| VpaK11BI | GGWCC | 1 cut(s) | 994 |
| VspI | ATTAAT | 1 cut(s) | 374 |
| XapI | RAATTY | 4 cut(s) | 999, 1701, 1713, 1769 |
| XbaI | TCTAGA | 1 cut(s) | 1849 |
| XceI | RCATGY | 1 cut(s) | 85 |
| XhoI | CTCGAG | 1 cut(s) | 1381 |
| XmiI | GTMKAC | 2 cut(s) | 795, 1695 |
| ZraI | GACGTC | 1 cut(s) | 799 |