Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0006384

Physical Location & Seq

Genomic Coordinates Forward (+)

5301024 .. 5304542

Gene Structure 3519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1031300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGGCGGTCGCGGGCCATTCGATCCAGACGTGTTTTGGTATCAAAGCTAAGAACCCAAGTGCCAATTTAGAGAAAAAGGTTTTTGGGGTGCCAGTTTTGCATCATGGGTTGTCTTGTAATGGGAAGAAATTGAAAGGGAAAGTTGGTAACAGAGTGCAGGTGGATTTAGAGGCGGCGGAGAGTTTGAAAATTTTGAAGAGTTTGGATCTTGATGCGGTGTCGGAGAGGGAGTTGAGGGAGAAGGGGTTTTTGGGATTGAGGAAGACCAAGCTTGTGTGCACAATTGGGCCGGCTTGTTCGTCTTTGGAGGATTTGGAGAAGTTGGTTTTGGGAGGGATGAATGTGGCAAGGCTCAATATGTGTCATAACACGCGGGAGTGGCACCGCGACGTCATTAGGAAGATCAAGAGATTGAATGAGGAAAAGGGGTTTTCTGTTTCAGTTATGATCGATACCGAAGGCACTCAGATTCATGTTGTTGATCATGGTGATCCATCCTCTCTTAAAGTTCAGGAGGATTCAGTCTGGCTATTTACAAATGAAAATTTTGAGGGTTCTCTTCCATTCACAGTGCAAGCAAATTATGAAGGTTTTTCTGATGGTATCAAAGTGGGTGATGAACTTGTTCTTGATGGTGGAATGGCACGCTTTGAAGTCATAGAAAAATTAGGAAGCGACCTGCGTTGTAAGTGCACAGACCCCGGTCTATTCCTGCCTCGTGCCAAATTCAGCTTCTGGAGAGATGGGAAGCTTGTGGAGAGGAACTATGAGCTCCCAATTCTGTCTACTAAGGATTGGTCCGACATTGAATTCGTAATCTCTGAAGGCATTGATTTTATTGCCATGTCATTTGTAAACAATGCGGAATCTGTGAAGCATTTGAAGAATTATCTCTTCACCAAATCAGCCAAATCCATAAGAGTTTTGGCTAAGATTGAGAGCTTGGAATCCCTTCAGAATTTGGAAGAAATCGTAGAGGCTTCGGATGGAATTATGATTGCGCGAGTTGACCTTGGAGTTGAGGTCCCACTTGAACAGATTCCAACAGTCCAAGAAGAAATAACCAATCTCTGCAGGCGGCTAAACAAGCCAGTAATTGTAGCTTCTCAGTTTCTTGAGTCAATGATCGAGTATCCAACTCCAACGCGTGCTGAGGTTGCAGATGTTTCTGAAGCTGTTCGACAATATGCAGACGCGTTGATGTTAGCTGGGGAATCCGCAATTGGATTATTTGGAGAGAAGGCTCTTTCTGTCCTTCAAACGACCAGCAGTAGAATGGAAACATGGAGTCATGTGGAAAACCGGCAAGGTTCTCTCCTTCAGCGCCAACTAGGAGTCTCGTTGCCTGACCGCATTGCTGAGCAGATATGCAATTCTGCTGTTGAAATGGCTAACAACCTTGCTGTGGATGCAATCTTTGTGTACACCAAGCACGGGCACATGGCATCGCTCTTGTCACGAAACAGACCAAACCCTCCCGTATTTGCTTTCACAAATGATGAAAGCACCCGTATGGCTCTTAATTTGCAGTGGGGAGTGATCCCTCTTCTTGCCAATCTATCGGATGATATGGAGTCTAACATCTCAAGCACCATCCATCTCATAAAATCAAAAGGATTGGTGAAAGAAGGAGATTCGGTCTTGGTGGTCTCGGATGTCCCTCCTTCCCGCGTTACTCCAATGGCATCCCAATCAATCCAGGTGAAGACCATTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00010 ko00230 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04922 ko04930 ko05165 ko05203 ko05230 map00010 map00230 map00620 map01100 map01110 map01120 map01130 map01200 map01230 map04922 map04930 map05165 map05203 map05230

Pfam Domains

Protein Families

PK PK_C

Protein Analysis

573

Amino Acids

63.22

Weight (kDa)

5.69

Isoelectric Point (pI)

34.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK	PF00224	87 - 415	1.6e-80	Pyruvate kinase, barrel domain
HpcH_HpaI	PF03328	268 - 334	7.7e-06	HpcH/HpaI aldolase/citrate lyase
PK_C	PF02887	454 - 555	4.2e-24	Pyruvate kinase, alpha/beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006384)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g03100 FvH4_2g03100 FvH4_2g03100 FvH4_2g03100
malus_domestica	MD00G1031300.v1.1 MD05G1107300.v1.1
prunus_persica	Prupe.8G151100_v2.0.a1 Prupe.8G151100_v2.0.a1 Prupe.8G151100_v2.0.a1 Prupe.8G151100_v2.0.a1 Prupe.8G151100_v2.0.a1 Prupe.8G151100_v2.0.a1 Prupe.8G151100_v2.0.a1
pyrus_communis	pycom05g10390 pycom10g09680
rosa_chinensis	RchiOBHm_Chr6g0247971
rosa_laevigata	RLG00000015166
rosa_multiflora	Rmu_sc0010633.1_g000004 Rmu_sc0030265.1_g000001
rosa_roxburghii	Rroxscaffold_179G00449310 Rroxscaffold_7G00213540
rosa_rugosa	Rorug05G0529900
rosa_samantha	Rh6AG044700 Rh6BG039700 Rh6CG038300 Rh6DG035300
rosa_wichuraiana	Rw6G003890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	148
AatII	GACGTC	1 cut(s)	393
Acc36I	ACCTGC	2 cut(s)	148, 687
AccB1I	GGYRCC	2 cut(s)	88, 381
AccI	GTMKAC	1 cut(s)	785
AccII	CGCG	7 cut(s)	11, 373, 387, 1003, 1147, 1196, 1671
AclWI	GGATC	4 cut(s)	16, 213, 485, 1534
AcsI	RAATTY	5 cut(s)	189, 544, 725, 809, 958
AcuI	CTGAAG	4 cut(s)	843, 938, 1191, 1304
AcyI	GRCGYC	1 cut(s)	390
AfaI	GTAC	1 cut(s)	1424
AfiI	CCNNNNNNNGG	2 cut(s)	1405, 1434
AflIII	ACRYGT	3 cut(s)	29, 1145, 1194
AjiI	CACGTC	1 cut(s)	30
AjnI	CCWGG	1 cut(s)	1698
AjuI	GAANNNNNNNTTGG	8 cut(s)	233, 265, 311, 343, 716, 748, 1206, 1238
AluBI	AGCT	9 cut(s)	47, 271, 732, 751, 772, 942, 1103, 1175, 1208
AluI	AGCT	9 cut(s)	47, 271, 732, 751, 772, 942, 1103, 1175, 1208
Alw21I	GWGCWC	3 cut(s)	281, 695, 774
Alw26I	GTCTC	2 cut(s)	1342, 1654
Alw44I	GTGCAC	2 cut(s)	277, 691
AlwI	GGATC	4 cut(s)	16, 213, 485, 1534
AlwNI	CAGNNNCTG	1 cut(s)	735
AoxI	GGCC	2 cut(s)	13, 287
ApaLI	GTGCAC	2 cut(s)	277, 691
ApoI	RAATTY	5 cut(s)	189, 544, 725, 809, 958
ArsI	GACNNNNNNTTYG	2 cut(s)	794, 826
Asp700I	GAANNNNTTC	4 cut(s)	624, 951, 1038, 1176
AspLEI	GCGC	2 cut(s)	1003, 1326
AspS9I	GGNCC	4 cut(s)	13, 287, 798, 1024
AsuC2I	CCSGG	1 cut(s)	702
AsuHPI	GGTGA	5 cut(s)	500, 626, 889, 1633, 1714
AvaII	GGWCC	2 cut(s)	798, 1024
BaeGI	GKGCMC	3 cut(s)	281, 695, 1440
BanI	GGYRCC	2 cut(s)	88, 381
BanII	GRGCYC	1 cut(s)	774
BauI	CACGAG	1 cut(s)	717
BbsI	GAAGAC	2 cut(s)	269, 1712
Bbv12I	GWGCWC	3 cut(s)	281, 695, 774
BbvCI	CCTCAGC	1 cut(s)	1152
BccI	CCATC	7 cut(s)	502, 593, 626, 737, 980, 1601, 1605
BciT130I	CCWGG	1 cut(s)	1700
BciVI	GTATCC	1 cut(s)	1143
BclI	TGATCA	1 cut(s)	481
BcnI	CCSGG	1 cut(s)	702
BcoDI	GTCTC	2 cut(s)	1342, 1654
BfaI	CTAG	1 cut(s)	1331
BfmI	CTRYAG	1 cut(s)	1072
BfoI	RGCGCY	1 cut(s)	1327
BfuAI	ACCTGC	2 cut(s)	148, 687
BfuI	GTATCC	1 cut(s)	1143
BisI	GCNGC	2 cut(s)	174, 1079
BlpI	GCTNAGC	1 cut(s)	1359
BlsI	GCNGC	2 cut(s)	175, 1080
Bme1390I	CCNGG	2 cut(s)	702, 1700
Bme18I	GGWCC	2 cut(s)	798, 1024
BmgBI	CACGTC	1 cut(s)	30
BmgT120I	GGNCC	4 cut(s)	13, 287, 798, 1024
BmiI	GGNNCC	3 cut(s)	90, 383, 1026
BmrFI	CCNGG	2 cut(s)	702, 1700
BmsI	GCATC	5 cut(s)	109, 202, 1399, 1454, 1694
BoxI	GACNNNNGTC	1 cut(s)	702
BpiI	GAAGAC	2 cut(s)	269, 1712
BpmI	CTGGAG	1 cut(s)	757
Bpu10I	CCTNAGC	1 cut(s)	1152
Bpu1102I	GCTNAGC	1 cut(s)	1359
BpuEI	CTTGAG	2 cut(s)	1136, 1570
BpuMI	CCSGG	1 cut(s)	702
Bsa29I	ATCGAT	1 cut(s)	450
BsaHI	GRCGYC	1 cut(s)	390
BsaI	GGTCTC	1 cut(s)	1654
BsaJI	CCNNGG	2 cut(s)	700, 1012
BsaXI	ACNNNNNCTCC	8 cut(s)	215, 230, 245, 260, 1008, 1038, 1623, 1653
Bsc4I	CCNNNNNNNGG	2 cut(s)	1405, 1434
Bse118I	RCCGGY	2 cut(s)	289, 1302
Bse1I	ACTGG	2 cut(s)	92, 1091
Bse3DI	GCAATG	1 cut(s)	1353
BseBI	CCWGG	1 cut(s)	1700
BseCI	ATCGAT	1 cut(s)	450
BseDI	CCNNGG	2 cut(s)	700, 1012
BseGI	GGATG	8 cut(s)	342, 494, 991, 1414, 1570, 1593, 1660, 1685
BseLI	CCNNNNNNNGG	2 cut(s)	1405, 1434
BseMI	GCAATG	1 cut(s)	1353
BseMII	CTCAG	4 cut(s)	479, 1121, 1143, 1350
BseNI	ACTGG	2 cut(s)	92, 1091
BseSI	GKGCMC	3 cut(s)	281, 695, 1440
BseYI	CCCAGC	1 cut(s)	1208
BsgI	GTGCAG	1 cut(s)	176
Bsh1236I	CGCG	7 cut(s)	11, 373, 387, 1003, 1147, 1196, 1671
Bsh1285I	CGRYCG	1 cut(s)	9
BshFI	GGCC	2 cut(s)	15, 289
BshNI	GGYRCC	2 cut(s)	88, 381
BshVI	ATCGAT	1 cut(s)	450
BsiEI	CGRYCG	1 cut(s)	9
BsiHKAI	GWGCWC	3 cut(s)	281, 695, 774
BsiSI	CCGG	3 cut(s)	290, 702, 1303
BslFI	GGGAC	2 cut(s)	1010, 1643
BslI	CCNNNNNNNGG	2 cut(s)	1405, 1434
BsmAI	GTCTC	2 cut(s)	1342, 1654
BsmFI	GGGAC	2 cut(s)	1010, 1643
BsnI	GGCC	2 cut(s)	15, 289
Bso31I	GGTCTC	1 cut(s)	1654
Bsp1286I	GDGCHC	4 cut(s)	281, 695, 774, 1440
Bsp1407I	TGTACA	1 cut(s)	1422
Bsp143I	GATC	8 cut(s)	21, 205, 402, 447, 481, 490, 1125, 1539
Bsp1720I	GCTNAGC	1 cut(s)	1359
BspANI	GGCC	2 cut(s)	15, 289
BspCNI	CTCAG	4 cut(s)	478, 1120, 1144, 1351
BspDI	ATCGAT	1 cut(s)	450
BspFNI	CGCG	7 cut(s)	11, 373, 387, 1003, 1147, 1196, 1671
BspLI	GGNNCC	3 cut(s)	90, 383, 1026
BspMAI	CTGCAG	1 cut(s)	1076
BspMI	ACCTGC	2 cut(s)	148, 687
BspPI	GGATC	4 cut(s)	16, 213, 485, 1534
BspT107I	GGYRCC	2 cut(s)	88, 381
BspTNI	GGTCTC	1 cut(s)	1654
BsrDI	GCAATG	1 cut(s)	1353
BsrFI	RCCGGY	2 cut(s)	289, 1302
BsrGI	TGTACA	1 cut(s)	1422
BsrI	ACTGG	2 cut(s)	92, 1091
BssAI	RCCGGY	2 cut(s)	289, 1302
BssECI	CCNNGG	2 cut(s)	700, 1012
BssMI	GATC	8 cut(s)	21, 205, 402, 447, 481, 490, 1125, 1539
BssNI	GRCGYC	1 cut(s)	390
BssSI	CACGAG	1 cut(s)	717
BssT1I	CCWWGG	1 cut(s)	1012
Bst2BI	CACGAG	1 cut(s)	717
Bst2UI	CCWGG	1 cut(s)	1700
Bst4CI	ACNGT	2 cut(s)	571, 1048
Bst6I	CTCTTC	4 cut(s)	191, 564, 899, 1551
BstACI	GRCGYC	1 cut(s)	390
BstAUI	TGTACA	1 cut(s)	1422
BstC8I	GCNNGC	6 cut(s)	13, 291, 576, 646, 1076, 1149
BstDEI	CTNAG	7 cut(s)	48, 465, 789, 930, 1107, 1152, 1359
BstF5I	GGATG	8 cut(s)	342, 494, 991, 1414, 1570, 1593, 1660, 1685
BstFNI	CGCG	7 cut(s)	11, 373, 387, 1003, 1147, 1196, 1671
BstH2I	RGCGCY	1 cut(s)	1327
BstHHI	GCGC	2 cut(s)	1003, 1326
BstKTI	GATC	8 cut(s)	24, 208, 405, 450, 484, 493, 1128, 1542
BstMAI	GTCTC	2 cut(s)	1342, 1654
BstMBI	GATC	8 cut(s)	21, 205, 402, 447, 481, 490, 1125, 1539
BstMCI	CGRYCG	1 cut(s)	9
BstMWI	GCNNNNNNNGC	5 cut(s)	97, 379, 1087, 1157, 1409
BstNI	CCWGG	1 cut(s)	1700
BstPAI	GACNNNNGTC	1 cut(s)	702
BstSCI	CCNGG	2 cut(s)	700, 1698
BstSFI	CTRYAG	1 cut(s)	1072
BstSLI	GKGCMC	3 cut(s)	281, 695, 1440
BstUI	CGCG	7 cut(s)	11, 373, 387, 1003, 1147, 1196, 1671
BstV2I	GAAGAC	2 cut(s)	269, 1712
BstX2I	RGATCY	1 cut(s)	205
BstYI	RGATCY	1 cut(s)	205
Bsu15I	ATCGAT	1 cut(s)	450
BsuI	GTATCC	1 cut(s)	1143
BsuRI	GGCC	2 cut(s)	15, 289
BsuTUI	ATCGAT	1 cut(s)	450
BtgZI	GCGATG	1 cut(s)	1431
BtrI	CACGTC	1 cut(s)	30
BtsCI	GGATG	8 cut(s)	342, 494, 991, 1414, 1570, 1593, 1660, 1685
BtsI	GCAGTG	1 cut(s)	1535
BtsIMutI	CAGTG	2 cut(s)	576, 1535
BveI	ACCTGC	2 cut(s)	148, 687
Cac8I	GCNNGC	6 cut(s)	13, 291, 576, 646, 1076, 1149
CaiI	CAGNNNCTG	1 cut(s)	735
CfoI	GCGC	2 cut(s)	1003, 1326
Cfr10I	RCCGGY	2 cut(s)	289, 1302
Cfr13I	GGNCC	4 cut(s)	13, 287, 798, 1024
ClaI	ATCGAT	1 cut(s)	450
CseI	GACGC	1 cut(s)	1202
Csp6I	GTAC	1 cut(s)	1423
CviAII	CATG	7 cut(s)	104, 473, 485, 844, 1284, 1292, 1441
CviQI	GTAC	1 cut(s)	1423
DdeI	CTNAG	7 cut(s)	48, 465, 789, 930, 1107, 1152, 1359
DpnI	GATC	8 cut(s)	23, 207, 404, 449, 483, 492, 1127, 1541
DpnII	GATC	8 cut(s)	21, 205, 402, 447, 481, 490, 1125, 1539
Eam1104I	CTCTTC	4 cut(s)	191, 564, 899, 1551
EarI	CTCTTC	4 cut(s)	191, 564, 899, 1551
EciI	GGCGGA	1 cut(s)	191
Ecl136II	GAGCTC	1 cut(s)	772
Eco130I	CCWWGG	1 cut(s)	1012
Eco24I	GRGCYC	1 cut(s)	774
Eco31I	GGTCTC	1 cut(s)	1654
Eco47I	GGWCC	2 cut(s)	798, 1024
Eco53kI	GAGCTC	1 cut(s)	772
Eco57I	CTGAAG	4 cut(s)	843, 938, 1191, 1304
EcoICRI	GAGCTC	1 cut(s)	772
EcoO109I	RGGNCCY	1 cut(s)	1024
EcoRI	GAATTC	1 cut(s)	809
EcoRII	CCWGG	1 cut(s)	1698
EcoT14I	CCWWGG	1 cut(s)	1012
EcoT38I	GRGCYC	1 cut(s)	774
ErhI	CCWWGG	1 cut(s)	1012
FaeI	CATG	7 cut(s)	107, 476, 488, 847, 1287, 1295, 1444
FaqI	GGGAC	2 cut(s)	1010, 1643
FatI	CATG	7 cut(s)	103, 472, 484, 843, 1283, 1291, 1440
FauI	CCCGC	3 cut(s)	4, 366, 1676
FbaI	TGATCA	1 cut(s)	481
FblI	GTMKAC	1 cut(s)	785
Fnu4HI	GCNGC	2 cut(s)	174, 1079
FokI	GGATG	8 cut(s)	349, 481, 998, 1421, 1577, 1580, 1667, 1672
FriOI	GRGCYC	1 cut(s)	774
Fsp4HI	GCNGC	2 cut(s)	174, 1079
FspBI	CTAG	1 cut(s)	1331
GlaI	GCGC	2 cut(s)	1002, 1325
GluI	GCNGC	2 cut(s)	174, 1079
GsaI	CCCAGC	1 cut(s)	1212
GsuI	CTGGAG	1 cut(s)	757
HaeII	RGCGCY	1 cut(s)	1327
HaeIII	GGCC	2 cut(s)	15, 289
HapII	CCGG	3 cut(s)	290, 702, 1303
HgaI	GACGC	1 cut(s)	1202
HhaI	GCGC	2 cut(s)	1003, 1326
Hin1I	GRCGYC	1 cut(s)	390
Hin1II	CATG	7 cut(s)	107, 476, 488, 847, 1287, 1295, 1444
Hin6I	GCGC	2 cut(s)	1001, 1324
HinP1I	GCGC	2 cut(s)	1001, 1324
HincII	GTYRAC	1 cut(s)	1009
HindII	GTYRAC	1 cut(s)	1009
HindIII	AAGCTT	2 cut(s)	269, 749
HpaII	CCGG	3 cut(s)	290, 702, 1303
HphI	GGTGA	5 cut(s)	500, 626, 889, 1633, 1714
Hpy166II	GTNNAC	7 cut(s)	279, 693, 786, 856, 1009, 1423, 1425
Hpy188III	TCNNGA	8 cut(s)	25, 209, 406, 512, 629, 736, 1115, 1458
Hpy8I	GTNNAC	7 cut(s)	279, 693, 786, 856, 1009, 1423, 1425
Hpy99I	CGWCG	1 cut(s)	392
HpyCH4III	ACNGT	2 cut(s)	571, 1048
HpyCH4IV	ACGT	2 cut(s)	29, 390
HpyF10VI	GCNNNNNNNGC	5 cut(s)	97, 379, 1087, 1157, 1409
HpyF3I	CTNAG	7 cut(s)	48, 465, 789, 930, 1107, 1152, 1359
HpySE526I	ACGT	2 cut(s)	29, 390
Hsp92I	GRCGYC	1 cut(s)	390
Hsp92II	CATG	7 cut(s)	107, 476, 488, 847, 1287, 1295, 1444
HspAI	GCGC	2 cut(s)	1001, 1324
KroI	GCCGGC	1 cut(s)	289
KroNI	GCCGGC	1 cut(s)	291
Ksp22I	TGATCA	1 cut(s)	481
Kzo9I	GATC	8 cut(s)	21, 205, 402, 447, 481, 490, 1125, 1539
LmnI	GCTCC	1 cut(s)	777
LweI	GCATC	5 cut(s)	109, 202, 1399, 1454, 1694
MaeI	CTAG	1 cut(s)	1331
MaeII	ACGT	2 cut(s)	29, 390
MaeIII	GTNAC	3 cut(s)	146, 1455, 1672
MalI	GATC	8 cut(s)	23, 207, 404, 449, 483, 492, 1127, 1541
MboI	GATC	8 cut(s)	21, 205, 402, 447, 481, 490, 1125, 1539
MfeI	CAATTG	2 cut(s)	282, 1221
MflI	RGATCY	1 cut(s)	205
MhlI	GDGCHC	4 cut(s)	281, 695, 774, 1440
MluI	ACGCGT	2 cut(s)	1145, 1194
MlyI	GAGTC	4 cut(s)	1127, 1297, 1344, 1583
MmeI	TCCRAC	5 cut(s)	201, 825, 1067, 1160, 1166
MroNI	GCCGGC	1 cut(s)	289
MroXI	GAANNNNTTC	4 cut(s)	624, 951, 1038, 1176
MseI	TTAA	2 cut(s)	504, 1521
MslI	CAYNNNNRTG	1 cut(s)	1511
MspI	CCGG	3 cut(s)	290, 702, 1303
MspR9I	CCNGG	2 cut(s)	702, 1700
MunI	CAATTG	2 cut(s)	282, 1221
MvaI	CCWGG	1 cut(s)	1700
MvnI	CGCG	7 cut(s)	11, 373, 387, 1003, 1147, 1196, 1671
MwoI	GCNNNNNNNGC	5 cut(s)	97, 379, 1087, 1157, 1409
NaeI	GCCGGC	1 cut(s)	291
NciI	CCSGG	1 cut(s)	702
NdeII	GATC	8 cut(s)	21, 205, 402, 447, 481, 490, 1125, 1539
NgoMIV	GCCGGC	1 cut(s)	289
NlaIII	CATG	7 cut(s)	107, 476, 488, 847, 1287, 1295, 1444
NlaIV	GGNNCC	3 cut(s)	90, 383, 1026
NmuCI	GTSAC	1 cut(s)	1455
PaqCI	CACCTGC	1 cut(s)	148
PcsI	WCGNNNNNNNCGW	1 cut(s)	26
PdiI	GCCGGC	1 cut(s)	291
PdmI	GAANNNNTTC	4 cut(s)	624, 951, 1038, 1176
PfeI	GAWTC	7 cut(s)	469, 518, 866, 947, 1039, 1214, 1634
PkrI	GCNGC	2 cut(s)	175, 1080
PleI	GAGTC	4 cut(s)	1126, 1296, 1343, 1582
PpsI	GAGTC	4 cut(s)	1126, 1296, 1343, 1582
PpuMI	RGGWCCY	1 cut(s)	1024
PshAI	GACNNNNGTC	1 cut(s)	702
Psp124BI	GAGCTC	1 cut(s)	774
Psp5II	RGGWCCY	1 cut(s)	1024
Psp6I	CCWGG	1 cut(s)	1698
PspFI	CCCAGC	1 cut(s)	1208
PspGI	CCWGG	1 cut(s)	1698
PspN4I	GGNNCC	3 cut(s)	90, 383, 1026
PspPI	GGNCC	4 cut(s)	13, 287, 798, 1024
PspPPI	RGGWCCY	1 cut(s)	1024
PstI	CTGCAG	1 cut(s)	1076
PstNI	CAGNNNCTG	1 cut(s)	735
PsuI	RGATCY	1 cut(s)	205
RsaI	GTAC	1 cut(s)	1424
RsaNI	GTAC	1 cut(s)	1423
RseI	CAYNNNNRTG	1 cut(s)	1511
SacI	GAGCTC	1 cut(s)	774
SaqAI	TTAA	2 cut(s)	504, 1521
SatI	GCNGC	2 cut(s)	174, 1079
Sau3AI	GATC	8 cut(s)	21, 205, 402, 447, 481, 490, 1125, 1539
Sau96I	GGNCC	4 cut(s)	13, 287, 798, 1024
SchI	GAGTC	4 cut(s)	1127, 1297, 1344, 1583
ScrFI	CCNGG	2 cut(s)	702, 1700
SduI	GDGCHC	4 cut(s)	281, 695, 774, 1440
SfaNI	GCATC	5 cut(s)	109, 202, 1399, 1454, 1694
SfcI	CTRYAG	1 cut(s)	1072
SinI	GGWCC	2 cut(s)	798, 1024
SmiMI	CAYNNNNRTG	1 cut(s)	1511
SmlI	CTYRAG	2 cut(s)	1115, 1585
SmoI	CTYRAG	2 cut(s)	1115, 1585
SspMI	CTAG	1 cut(s)	1331
SstI	GAGCTC	1 cut(s)	774
StyD4I	CCNGG	2 cut(s)	700, 1698
StyI	CCWWGG	1 cut(s)	1012
TaaI	ACNGT	2 cut(s)	571, 1048
TaiI	ACGT	2 cut(s)	32, 393
TaqI	TCGA	4 cut(s)	20, 450, 1128, 1180
TaqII	GACCGA	1 cut(s)	1627
TatI	WGTACW	1 cut(s)	1422
TauI	GCSGC	2 cut(s)	176, 1081
TfiI	GAWTC	7 cut(s)	469, 518, 866, 947, 1039, 1214, 1634
Tru1I	TTAA	2 cut(s)	504, 1521
Tru9I	TTAA	2 cut(s)	504, 1521
TscAI	CASTG	2 cut(s)	576, 1535
TseFI	GTSAC	1 cut(s)	1455
Tsp45I	GTSAC	1 cut(s)	1455
TspDTI	ATGAA	6 cut(s)	353, 461, 555, 600, 633, 1515
TspRI	CASTG	2 cut(s)	576, 1535
VneI	GTGCAC	2 cut(s)	277, 691
VpaK11BI	GGWCC	2 cut(s)	798, 1024
XapI	RAATTY	5 cut(s)	189, 544, 725, 809, 958
XcmI	CCANNNNNNNNNTGG	3 cut(s)	32, 922, 1273
XmiI	GTMKAC	1 cut(s)	785
XmnI	GAANNNNTTC	4 cut(s)	624, 951, 1038, 1176
XspI	CTAG	1 cut(s)	1331
ZraI	GACGTC	1 cut(s)	391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.