Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0007609

Physical Location & Seq

Genomic Coordinates Reverse (-)

15032526 .. 15034648

Gene Structure 2123 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1075000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGTGAAGATATGTTGCATTGGAGCTGGATATGTTGGGGGCCCTACAATGGCAGTGATTGCACTCAAGTGCCCGTCCGTTGAAGTAGCCGTCGTTGACATCTGGGATAAACGGATTGCAGCTTGGAACAGTGACCAACTTCCCATTTATGAACCCGGCCTCGACGACGTCGTGAAGCAGTGCCGCGGCAAGAACCTCTTCTTCAGCACTGATGTGAAGAAGCACGTCAAGGAAGCTGATATAGTATTTGTCTCTGTCAACACCCCGACCAAAACTACAGGTCTCGGAGCAGGCAAAGCTGCAGATTTGACATATTGGGAGAGTGCTGCTCGAATGATTGCCGATGTCTCCGAGTCTAGCAAAGTTGTTGTCGAAAAATCCACCGTCCCTGTGAAAACAGCCGAGGCAATAGAAAAAATTTTGACCCACAACGGCAAGGGAATCAAATTCCAGATCCTCTCAAACCCTGAATTTCTTGCCGAAGGAACTGCAATTGAAGATCTTTTTAAACCCGACCGGGTCCTCATCGGTGGCAGGGAAACCGCTGAAGGCCAGAAGGCCATCAAAGCATTGAAGGATATTTATGCTCAGTGGGTTTCTGAAGACCGTATCCTAACCACCAATCTTTGGTCTGCAGAGCTCTCCAAGCTTGCTGCCAATGCATTCTTGGCACAGAGAATATCGTCTGTCAACGCCATGTCTGCGCTTTGTGAGGCTACTGGGGCAAATGTTACACAGGTTTCGCATGCTATTGGTATGGACACTAGGATAGGCCCCAAGTTCCTTAACGCTAGTGTCGGTTTTGGGGGATCCTGCTTCCAGAAGGACATCCTGAATCTTGTTTACATCTGCGAATGCAATGGTCTTCCGGAGGTAGCAGAGTACTGGAAACAGGTTGTGAAGATCAATGAGTACCAAAAGAGCAGGTTTGTGAATCGTGTAGTTGCATCCATGTTCAACACTGTGTCGACAAAGAAGATAGCAATACTAGGGTTTGCCTTCAAGAAAGATACTGGTGACACAAGGGAGACCCCAGCAGTTGATGTGTGCAAGGGGTTGTTGATTGACAAGGCCGAACTGAGCATATATGATCCACAGGTGACCGAGGACCAGATCAGCAGGGAACTGACTATGAGAAAGTTCGACTGGGATCACCCGATGCACCTGCAACCAATGAGCAGCAGTAGTACTCTGGAGAAAGTGAGTATGGTCTCGGATGCCTATGCGGCAACAAAGGGTGCCCATGGTATTTGCATTCTCACTGAATGGGATGAGTTCAAGACTCTCGATTACAAGAAGATATATGAGAATATGCAGAAACCGGCATTCATTTTCGACGGTAGGCATGTTATCGATGTAGATAAACTGCGCGAAATTGGCTTCATTGTCTTTTCAATTGGTAAGCCCCTGGATGCATGGCTCAAGGACATGCCTGCTGTCGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003979 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0006022 GO:0006023 GO:0006024 GO:0006065 GO:0006082 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009225 GO:0009226 GO:0009664 GO:0009987 GO:0010393 GO:0016043 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0017144 GO:0018130 GO:0019438 GO:0019752 GO:0030203 GO:0030312 GO:0034641 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0045488 GO:0046394 GO:0046398 GO:0046483 GO:0048046 GO:0052546 GO:0055086 GO:0055114 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

UDPG_MGDP_dh UDPG_MGDP_dh_C UDPG_MGDP_dh_N

Protein Analysis

482

Amino Acids

53.0

Weight (kDa)

6.23

Isoelectric Point (pI)

23.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPG_MGDP_dh_N	PF03721	3 - 186	9.3e-66	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDPG_MGDP_dh	PF00984	210 - 304	1.2e-32	UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDPG_MGDP_dh_C	PF03720	328 - 452	1.1e-29	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007609)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29360 AT3G29360 AT5G15490 AT5G39320
fragaria_vesca	FvH4_7g08190
malus_domestica	MD00G1075000.v1.1 MD15G1316900.v1.1
prunus_persica	Prupe.3G257300_v2.0.a1 Prupe.3G257300_v2.0.a1 Prupe.3G257300_v2.0.a1 Prupe.7G028000_v2.0.a1
pyrus_communis	pycom01g06430 pycom15g27960
rosa_chinensis	RchiOBHm_Chr1g0340961
rosa_laevigata	RLG00000029054
rosa_multiflora	Rmu_sc0001211.1_g000083 Rmu_sc0002200.1_g000046
rosa_roxburghii	Rroxscaffold_4G00311610
rosa_rugosa	Rorug01G0160500.1
rosa_samantha	Rh1AG175200 Rh1BG143500 Rh1CG163200 Rh1DG175100
rosa_wichuraiana	Rw1G014700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1173
AatII	GACGTC	1 cut(s)	171
Acc36I	ACCTGC	2 cut(s)	915, 1173
AccB1I	GGYRCC	1 cut(s)	1238
AccB7I	CCANNNNNTGG	1 cut(s)	627
AccI	GTMKAC	1 cut(s)	968
AccII	CGCG	2 cut(s)	186, 1371
AccIII	TCCGGA	1 cut(s)	868
AciI	CCGC	4 cut(s)	184, 186, 543, 1226
AclWI	GGATC	5 cut(s)	448, 804, 817, 1085, 1158
AcsI	RAATTY	3 cut(s)	417, 446, 470
AcuI	CTGAAG	3 cut(s)	187, 567, 621
AcyI	GRCGYC	1 cut(s)	168
AfaI	GTAC	3 cut(s)	884, 914, 1189
AfiI	CCNNNNNNNGG	2 cut(s)	49, 627
AgsI	TTSAA	7 cut(s)	83, 497, 574, 958, 1003, 1279, 1395
AjiI	CACGTC	1 cut(s)	226
AjnI	CCWGG	1 cut(s)	1407
AleI	CACNNNNGTG	2 cut(s)	67, 212
AluBI	AGCT	6 cut(s)	26, 122, 236, 299, 640, 649
AluI	AGCT	6 cut(s)	26, 122, 236, 299, 640, 649
Alw21I	GWGCWC	1 cut(s)	642
Alw26I	GTCTC	5 cut(s)	256, 287, 352, 1022, 1216
AlwI	GGATC	5 cut(s)	448, 804, 817, 1085, 1158
Aor13HI	TCCGGA	1 cut(s)	868
AoxI	GGCC	6 cut(s)	40, 157, 550, 558, 772, 1071
ApaI	GGGCCC	1 cut(s)	44
ApeKI	GCWGC	5 cut(s)	119, 299, 326, 653, 1179
ApoI	RAATTY	3 cut(s)	417, 446, 470
ArsI	GACNNNNNNTTYG	2 cut(s)	354, 386
Asp700I	GAANNNNTTC	1 cut(s)	197
AspLEI	GCGC	2 cut(s)	706, 1371
AspS9I	GGNCC	5 cut(s)	40, 41, 520, 773, 1108
AsuC2I	CCSGG	2 cut(s)	156, 518
AsuHPI	GGTGA	4 cut(s)	16, 1028, 1111, 1145
AvaII	GGWCC	2 cut(s)	520, 1108
BaeGI	GKGCMC	3 cut(s)	44, 74, 1243
BamHI	GGATCC	1 cut(s)	809
BanI	GGYRCC	1 cut(s)	1238
BanII	GRGCYC	2 cut(s)	44, 642
BbsI	GAAGAC	2 cut(s)	609, 857
Bbv12I	GWGCWC	1 cut(s)	642
BbvI	GCAGC	5 cut(s)	131, 286, 313, 640, 1191
BccI	CCATC	1 cut(s)	569
BceAI	ACGGC	2 cut(s)	74, 448
BcgI	CGANNNNNNTGC	4 cut(s)	470, 504, 1147, 1181
BciT130I	CCWGG	1 cut(s)	1409
BciVI	GTATCC	1 cut(s)	620
BcnI	CCSGG	2 cut(s)	156, 518
BcoDI	GTCTC	5 cut(s)	256, 287, 352, 1022, 1216
BfaI	CTAG	4 cut(s)	357, 765, 792, 989
BfmI	CTRYAG	3 cut(s)	276, 300, 633
BfuAI	ACCTGC	2 cut(s)	915, 1173
BfuI	GTATCC	1 cut(s)	620
BglI	GCCNNNNNGGC	1 cut(s)	1226
BglII	AGATCT	1 cut(s)	499
BisI	GCNGC	8 cut(s)	120, 184, 187, 300, 327, 654, 1180, 1227
BlsI	GCNGC	8 cut(s)	121, 185, 188, 301, 328, 655, 1181, 1228
BmcAI	AGTACT	2 cut(s)	884, 1189
Bme1390I	CCNGG	3 cut(s)	156, 518, 1409
Bme18I	GGWCC	2 cut(s)	520, 1108
BmgBI	CACGTC	1 cut(s)	226
BmgT120I	GGNCC	5 cut(s)	40, 41, 520, 773, 1108
BmiI	GGNNCC	6 cut(s)	41, 42, 521, 775, 811, 1240
BmrFI	CCNGG	3 cut(s)	156, 518, 1409
BmrI	ACTGGG	2 cut(s)	729, 1156
BmsI	GCATC	4 cut(s)	956, 1149, 1207, 1402
BmuI	ACTGGG	2 cut(s)	729, 1156
BpiI	GAAGAC	2 cut(s)	609, 857
BplI	GAGNNNNNCTC	2 cut(s)	313, 345
BpmI	CTGGAG	1 cut(s)	1214
BpuEI	CTTGAG	2 cut(s)	50, 1406
BpuMI	CCSGG	2 cut(s)	156, 518
Bsa29I	ATCGAT	1 cut(s)	1353
BsaHI	GRCGYC	1 cut(s)	168
BsaI	GGTCTC	3 cut(s)	287, 1022, 1216
BsaJI	CCNNGG	5 cut(s)	184, 402, 1104, 1243, 1407
BsaWI	WCCGGW	1 cut(s)	868
Bsc4I	CCNNNNNNNGG	2 cut(s)	49, 627
Bse118I	RCCGGY	1 cut(s)	1321
Bse1I	ACTGG	4 cut(s)	724, 890, 1018, 1151
Bse3DI	GCAATG	1 cut(s)	865
BseAI	TCCGGA	1 cut(s)	868
BseBI	CCWGG	1 cut(s)	1409
BseCI	ATCGAT	1 cut(s)	1353
BseDI	CCNNGG	5 cut(s)	184, 402, 1104, 1243, 1407
BseGI	GGATG	5 cut(s)	828, 947, 1222, 1276, 1417
BseLI	CCNNNNNNNGG	2 cut(s)	49, 627
BseMI	GCAATG	1 cut(s)	865
BseMII	CTCAG	2 cut(s)	602, 1070
BseNI	ACTGG	4 cut(s)	724, 890, 1018, 1151
BseSI	GKGCMC	3 cut(s)	44, 74, 1243
BseXI	GCAGC	5 cut(s)	131, 286, 313, 640, 1191
BseYI	CCCAGC	1 cut(s)	1033
Bsh1236I	CGCG	2 cut(s)	186, 1371
Bsh1285I	CGRYCG	1 cut(s)	517
BshFI	GGCC	6 cut(s)	42, 159, 552, 560, 774, 1073
BshNI	GGYRCC	1 cut(s)	1238
BshVI	ATCGAT	1 cut(s)	1353
BsiEI	CGRYCG	1 cut(s)	517
BsiHKAI	GWGCWC	1 cut(s)	642
BsiSI	CCGG	4 cut(s)	156, 517, 869, 1322
BslFI	GGGAC	1 cut(s)	371
BslI	CCNNNNNNNGG	2 cut(s)	49, 627
BsmAI	GTCTC	5 cut(s)	256, 287, 352, 1022, 1216
BsmFI	GGGAC	1 cut(s)	371
BsmI	GAATGC	4 cut(s)	662, 860, 1254, 1325
BsnI	GGCC	6 cut(s)	42, 159, 552, 560, 774, 1073
Bso31I	GGTCTC	3 cut(s)	287, 1022, 1216
Bsp120I	GGGCCC	1 cut(s)	40
Bsp1286I	GDGCHC	4 cut(s)	44, 74, 642, 1243
Bsp13I	TCCGGA	1 cut(s)	868
Bsp143I	GATC	7 cut(s)	453, 499, 809, 903, 1090, 1113, 1150
Bsp19I	CCATGG	1 cut(s)	1243
BspACI	CCGC	4 cut(s)	184, 186, 543, 1226
BspANI	GGCC	6 cut(s)	42, 159, 552, 560, 774, 1073
BspCNI	CTCAG	2 cut(s)	601, 1071
BspDI	ATCGAT	1 cut(s)	1353
BspEI	TCCGGA	1 cut(s)	868
BspFNI	CGCG	2 cut(s)	186, 1371
BspLI	GGNNCC	6 cut(s)	41, 42, 521, 775, 811, 1240
BspMAI	CTGCAG	2 cut(s)	304, 637
BspMI	ACCTGC	2 cut(s)	915, 1173
BspPI	GGATC	5 cut(s)	448, 804, 817, 1085, 1158
BspT107I	GGYRCC	1 cut(s)	1238
BspTNI	GGTCTC	3 cut(s)	287, 1022, 1216
BsrDI	GCAATG	1 cut(s)	865
BsrFI	RCCGGY	1 cut(s)	1321
BsrI	ACTGG	4 cut(s)	724, 890, 1018, 1151
BssAI	RCCGGY	1 cut(s)	1321
BssECI	CCNNGG	5 cut(s)	184, 402, 1104, 1243, 1407
BssMI	GATC	7 cut(s)	453, 499, 809, 903, 1090, 1113, 1150
BssNI	GRCGYC	1 cut(s)	168
BssT1I	CCWWGG	1 cut(s)	1243
Bst2UI	CCWGG	1 cut(s)	1409
Bst4CI	ACNGT	5 cut(s)	131, 385, 608, 964, 1340
Bst6I	CTCTTC	1 cut(s)	203
BstACI	GRCGYC	1 cut(s)	168
BstAPI	GCANNNNNTGC	1 cut(s)	59
BstC8I	GCNNGC	4 cut(s)	292, 651, 747, 1434
BstDEI	CTNAG	2 cut(s)	588, 1079
BstDSI	CCRYGG	2 cut(s)	184, 1243
BstEII	GGTNACC	1 cut(s)	1099
BstF5I	GGATG	5 cut(s)	828, 947, 1222, 1276, 1417
BstFNI	CGCG	2 cut(s)	186, 1371
BstHHI	GCGC	2 cut(s)	706, 1371
BstKTI	GATC	7 cut(s)	456, 502, 812, 906, 1093, 1116, 1153
BstMAI	GTCTC	5 cut(s)	256, 287, 352, 1022, 1216
BstMBI	GATC	7 cut(s)	453, 499, 809, 903, 1090, 1113, 1150
BstMCI	CGRYCG	1 cut(s)	517
BstNI	CCWGG	1 cut(s)	1409
BstNSI	RCATGY	3 cut(s)	749, 1349, 1432
BstPI	GGTNACC	1 cut(s)	1099
BstSCI	CCNGG	3 cut(s)	154, 516, 1407
BstSFI	CTRYAG	3 cut(s)	276, 300, 633
BstSLI	GKGCMC	3 cut(s)	44, 74, 1243
BstUI	CGCG	2 cut(s)	186, 1371
BstV1I	GCAGC	5 cut(s)	131, 286, 313, 640, 1191
BstV2I	GAAGAC	2 cut(s)	609, 857
BstX2I	RGATCY	3 cut(s)	453, 499, 809
BstYI	RGATCY	3 cut(s)	453, 499, 809
Bsu15I	ATCGAT	1 cut(s)	1353
BsuI	GTATCC	1 cut(s)	620
BsuRI	GGCC	6 cut(s)	42, 159, 552, 560, 774, 1073
BsuTUI	ATCGAT	1 cut(s)	1353
BtgI	CCRYGG	2 cut(s)	184, 1243
BtrI	CACGTC	1 cut(s)	226
BtsCI	GGATG	5 cut(s)	828, 947, 1222, 1276, 1417
BtsI	GCAGTG	2 cut(s)	60, 185
BtsIMutI	CAGTG	7 cut(s)	60, 136, 185, 207, 596, 960, 1260
BveI	ACCTGC	2 cut(s)	915, 1173
Cac8I	GCNNGC	4 cut(s)	292, 651, 747, 1434
CfoI	GCGC	2 cut(s)	706, 1371
Cfr10I	RCCGGY	1 cut(s)	1321
Cfr13I	GGNCC	5 cut(s)	40, 41, 520, 773, 1108
Cfr42I	CCGCGG	1 cut(s)	187
ClaI	ATCGAT	1 cut(s)	1353
Csp6I	GTAC	3 cut(s)	883, 913, 1188
CviAII	CATG	7 cut(s)	697, 746, 952, 1244, 1346, 1416, 1429
CviQI	GTAC	3 cut(s)	883, 913, 1188
DdeI	CTNAG	2 cut(s)	588, 1079
DpnI	GATC	7 cut(s)	455, 501, 811, 905, 1092, 1115, 1152
DpnII	GATC	7 cut(s)	453, 499, 809, 903, 1090, 1113, 1150
DraI	TTTAAA	1 cut(s)	508
Eam1104I	CTCTTC	1 cut(s)	203
EarI	CTCTTC	1 cut(s)	203
Ecl136II	GAGCTC	1 cut(s)	640
Eco130I	CCWWGG	1 cut(s)	1243
Eco24I	GRGCYC	2 cut(s)	44, 642
Eco31I	GGTCTC	3 cut(s)	287, 1022, 1216
Eco47I	GGWCC	2 cut(s)	520, 1108
Eco53kI	GAGCTC	1 cut(s)	640
Eco57I	CTGAAG	3 cut(s)	187, 567, 621
Eco91I	GGTNACC	1 cut(s)	1099
EcoICRI	GAGCTC	1 cut(s)	640
EcoO109I	RGGNCCY	4 cut(s)	40, 41, 520, 773
EcoO65I	GGTNACC	1 cut(s)	1099
EcoRII	CCWGG	1 cut(s)	1407
EcoT14I	CCWWGG	1 cut(s)	1243
EcoT22I	ATGCAT	2 cut(s)	664, 1417
EcoT38I	GRGCYC	2 cut(s)	44, 642
ErhI	CCWWGG	1 cut(s)	1243
FaeI	CATG	7 cut(s)	700, 749, 955, 1247, 1349, 1419, 1432
FalI	AAGNNNNNCTT	2 cut(s)	182, 214
FaqI	GGGAC	1 cut(s)	371
FatI	CATG	7 cut(s)	696, 745, 951, 1243, 1345, 1415, 1428
FblI	GTMKAC	1 cut(s)	968
Fnu4HI	GCNGC	8 cut(s)	120, 184, 187, 300, 327, 654, 1180, 1227
FokI	GGATG	5 cut(s)	815, 934, 1229, 1283, 1424
FriOI	GRGCYC	2 cut(s)	44, 642
Fsp4HI	GCNGC	8 cut(s)	120, 184, 187, 300, 327, 654, 1180, 1227
FspBI	CTAG	4 cut(s)	357, 765, 792, 989
GlaI	GCGC	2 cut(s)	705, 1370
GluI	GCNGC	8 cut(s)	120, 184, 187, 300, 327, 654, 1180, 1227
GsaI	CCCAGC	1 cut(s)	1037
GsuI	CTGGAG	1 cut(s)	1214
HaeIII	GGCC	6 cut(s)	42, 159, 552, 560, 774, 1073
HapII	CCGG	4 cut(s)	156, 517, 869, 1322
HhaI	GCGC	2 cut(s)	706, 1371
Hin1I	GRCGYC	1 cut(s)	168
Hin1II	CATG	7 cut(s)	700, 749, 955, 1247, 1349, 1419, 1432
Hin6I	GCGC	2 cut(s)	704, 1369
HinP1I	GCGC	2 cut(s)	704, 1369
HincII	GTYRAC	4 cut(s)	97, 259, 691, 969
HindII	GTYRAC	4 cut(s)	97, 259, 691, 969
HindIII	AAGCTT	1 cut(s)	647
HinfI	GANTC	5 cut(s)	353, 441, 835, 934, 1282
HpaII	CCGG	4 cut(s)	156, 517, 869, 1322
HphI	GGTGA	4 cut(s)	16, 1028, 1111, 1145
Hpy166II	GTNNAC	5 cut(s)	97, 259, 691, 844, 969
Hpy188I	TCNGA	4 cut(s)	287, 352, 601, 1216
Hpy188III	TCNNGA	9 cut(s)	172, 451, 820, 832, 869, 1003, 1193, 1279, 1286
Hpy8I	GTNNAC	5 cut(s)	97, 259, 691, 844, 969
Hpy99I	CGWCG	5 cut(s)	95, 167, 170, 173, 1340
HpyAV	CCTTC	6 cut(s)	476, 542, 550, 568, 817, 1009
HpyCH4III	ACNGT	5 cut(s)	131, 385, 608, 964, 1340
HpyCH4IV	ACGT	2 cut(s)	168, 225
HpyF3I	CTNAG	2 cut(s)	588, 1079
HpySE526I	ACGT	2 cut(s)	168, 225
Hsp92I	GRCGYC	1 cut(s)	168
Hsp92II	CATG	7 cut(s)	700, 749, 955, 1247, 1349, 1419, 1432
HspAI	GCGC	2 cut(s)	704, 1369
Kpn2I	TCCGGA	1 cut(s)	868
KspI	CCGCGG	1 cut(s)	187
Kzo9I	GATC	7 cut(s)	453, 499, 809, 903, 1090, 1113, 1150
LmnI	GCTCC	2 cut(s)	23, 287
Lsp1109I	GCAGC	5 cut(s)	131, 286, 313, 640, 1191
LweI	GCATC	4 cut(s)	956, 1149, 1207, 1402
MaeI	CTAG	4 cut(s)	357, 765, 792, 989
MaeII	ACGT	2 cut(s)	168, 225
MaeIII	GTNAC	4 cut(s)	131, 730, 1016, 1099
MalI	GATC	7 cut(s)	455, 501, 811, 905, 1092, 1115, 1152
MboI	GATC	7 cut(s)	453, 499, 809, 903, 1090, 1113, 1150
MfeI	CAATTG	2 cut(s)	492, 1395
MflI	RGATCY	3 cut(s)	453, 499, 809
MhlI	GDGCHC	4 cut(s)	44, 74, 642, 1243
MluCI	AATT	6 cut(s)	417, 446, 470, 492, 1374, 1395
MlyI	GAGTC	2 cut(s)	362, 1276
MnlI	CCTC	8 cut(s)	170, 206, 397, 467, 533, 706, 865, 1099
Mph1103I	ATGCAT	2 cut(s)	664, 1417
MroI	TCCGGA	1 cut(s)	868
MroXI	GAANNNNTTC	1 cut(s)	197
MseI	TTAA	2 cut(s)	507, 786
MslI	CAYNNNNRTG	2 cut(s)	67, 212
MspA1I	CMGCKG	2 cut(s)	186, 545
MspI	CCGG	4 cut(s)	156, 517, 869, 1322
MspR9I	CCNGG	3 cut(s)	156, 518, 1409
MunI	CAATTG	2 cut(s)	492, 1395
Mva1269I	GAATGC	4 cut(s)	662, 860, 1254, 1325
MvaI	CCWGG	1 cut(s)	1409
MvnI	CGCG	2 cut(s)	186, 1371
NciI	CCSGG	2 cut(s)	156, 518
NcoI	CCATGG	1 cut(s)	1243
NdeII	GATC	7 cut(s)	453, 499, 809, 903, 1090, 1113, 1150
NlaIII	CATG	7 cut(s)	700, 749, 955, 1247, 1349, 1419, 1432
NlaIV	GGNNCC	6 cut(s)	41, 42, 521, 775, 811, 1240
NmeAIII	GCCGAG	1 cut(s)	427
NmuCI	GTSAC	3 cut(s)	131, 1016, 1099
NsiI	ATGCAT	2 cut(s)	664, 1417
NspI	RCATGY	3 cut(s)	749, 1349, 1432
OliI	CACNNNNGTG	2 cut(s)	67, 212
PaeI	GCATGC	1 cut(s)	749
PaqCI	CACCTGC	1 cut(s)	1173
PcsI	WCGNNNNNNNCGW	1 cut(s)	168
PctI	GAATGC	4 cut(s)	662, 860, 1254, 1325
PdmI	GAANNNNTTC	1 cut(s)	197
PfeI	GAWTC	3 cut(s)	441, 835, 934
PflFI	GACNNNGTC	2 cut(s)	167, 518
PflMI	CCANNNNNTGG	1 cut(s)	627
PkrI	GCNGC	8 cut(s)	121, 185, 188, 301, 328, 655, 1181, 1228
PleI	GAGTC	2 cut(s)	361, 1276
PpsI	GAGTC	2 cut(s)	361, 1276
PpuMI	RGGWCCY	1 cut(s)	520
Psp124BI	GAGCTC	1 cut(s)	642
Psp5II	RGGWCCY	1 cut(s)	520
Psp6I	CCWGG	1 cut(s)	1407
PspEI	GGTNACC	1 cut(s)	1099
PspFI	CCCAGC	1 cut(s)	1033
PspGI	CCWGG	1 cut(s)	1407
PspN4I	GGNNCC	6 cut(s)	41, 42, 521, 775, 811, 1240
PspOMI	GGGCCC	1 cut(s)	40
PspPI	GGNCC	5 cut(s)	40, 41, 520, 773, 1108
PspPPI	RGGWCCY	1 cut(s)	520
PstI	CTGCAG	2 cut(s)	304, 637
PsuI	RGATCY	3 cut(s)	453, 499, 809
PsyI	GACNNNGTC	2 cut(s)	167, 518
RsaI	GTAC	3 cut(s)	884, 914, 1189
RsaNI	GTAC	3 cut(s)	883, 913, 1188
RseI	CAYNNNNRTG	2 cut(s)	67, 212
SacI	GAGCTC	1 cut(s)	642
SacII	CCGCGG	1 cut(s)	187
SalI	GTCGAC	1 cut(s)	967
SaqAI	TTAA	2 cut(s)	507, 786
SatI	GCNGC	8 cut(s)	120, 184, 187, 300, 327, 654, 1180, 1227
Sau3AI	GATC	7 cut(s)	453, 499, 809, 903, 1090, 1113, 1150
Sau96I	GGNCC	5 cut(s)	40, 41, 520, 773, 1108
ScaI	AGTACT	2 cut(s)	884, 1189
SchI	GAGTC	2 cut(s)	362, 1276
ScrFI	CCNGG	3 cut(s)	156, 518, 1409
SduI	GDGCHC	4 cut(s)	44, 74, 642, 1243
SfaNI	GCATC	4 cut(s)	956, 1149, 1207, 1402
SfcI	CTRYAG	3 cut(s)	276, 300, 633
Sfr303I	CCGCGG	1 cut(s)	187
SgrBI	CCGCGG	1 cut(s)	187
SinI	GGWCC	2 cut(s)	520, 1108
SmiMI	CAYNNNNRTG	2 cut(s)	67, 212
SmlI	CTYRAG	2 cut(s)	65, 1421
SmoI	CTYRAG	2 cut(s)	65, 1421
SphI	GCATGC	1 cut(s)	749
Sse9I	AATT	6 cut(s)	417, 446, 470, 492, 1374, 1395
SsiI	CCGC	4 cut(s)	184, 186, 543, 1226
SspMI	CTAG	4 cut(s)	357, 765, 792, 989
SstI	GAGCTC	1 cut(s)	642
StyD4I	CCNGG	3 cut(s)	154, 516, 1407
StyI	CCWWGG	1 cut(s)	1243
TaaI	ACNGT	5 cut(s)	131, 385, 608, 964, 1340
TaiI	ACGT	2 cut(s)	171, 228
TaqI	TCGA	8 cut(s)	162, 331, 372, 968, 1143, 1287, 1335, 1353
TaqII	GACCGA	1 cut(s)	1118
TasI	AATT	6 cut(s)	417, 446, 470, 492, 1374, 1395
TatI	WGTACW	2 cut(s)	882, 1187
TauI	GCSGC	3 cut(s)	186, 189, 1229
TfiI	GAWTC	3 cut(s)	441, 835, 934
Tru1I	TTAA	2 cut(s)	507, 786
Tru9I	TTAA	2 cut(s)	507, 786
TscAI	CASTG	7 cut(s)	60, 136, 185, 214, 596, 967, 1267
TseFI	GTSAC	3 cut(s)	131, 1016, 1099
TseI	GCWGC	5 cut(s)	119, 299, 326, 653, 1179
Tsp45I	GTSAC	3 cut(s)	131, 1016, 1099
TspDTI	ATGAA	3 cut(s)	165, 1318, 1372
TspGWI	ACGGA	2 cut(s)	67, 127
TspRI	CASTG	7 cut(s)	60, 136, 185, 214, 596, 967, 1267
Tth111I	GACNNNGTC	2 cut(s)	167, 518
Van91I	CCANNNNNTGG	1 cut(s)	627
VpaK11BI	GGWCC	2 cut(s)	520, 1108
XapI	RAATTY	3 cut(s)	417, 446, 470
XceI	RCATGY	3 cut(s)	749, 1349, 1432
XcmI	CCANNNNNNNNNTGG	1 cut(s)	664
XmiI	GTMKAC	1 cut(s)	968
XmnI	GAANNNNTTC	1 cut(s)	197
XspI	CTAG	4 cut(s)	357, 765, 792, 989
ZraI	GACGTC	1 cut(s)	169
ZrmI	AGTACT	2 cut(s)	884, 1189
Zsp2I	ATGCAT	2 cut(s)	664, 1417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.