Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0007609

Physical Location & Seq

Genomic Coordinates Forward (+)

35920254 .. 35923572

Gene Structure 3319 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG175100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1449 bp

ATGGTGAAGATCTGTTGCATTGGTGCTGGATATGTCGGGGGTCCTACGATGGCAGTGATTGCACTTAAGTGCCCCTCTGTTGAAGTTGTTGTCGTTGATCTTAATCAGAAACGGATTGATGCTTGGAACAGTGACACACTTCCAATTTATGAGCCTGGTCTTGATGATGTTGTCAAGCAGTGCCGAGGCAAGAACCTCTTCTTCAGCACCAAGGTGGATGAGAGCGTGATGGAAGCTGATATAGTGTTTGTCTCTGTCAACACCCCAACCAAAACAACAGGTCTTGGAGCAGGCAAAGCAGCCGATCTGACTTATTGGGAGAGTGCTGCTCGAATGATTGCTCGTGTATCAAAGTCCAGCAAAATTGTTGTTGAGAAATCGACAGTCCCAGTCAAAACAGCTGAGGCAATAGAAAAGATTTTGACCCACAACAACAAATCAGAAATCCAATTCCAAATTCTCTCAAACCCAGAATTTCTTGCTGAGGGAACTGCAATCGAAGACCTTTTTCACCCGGATCGTGTCCTCATTGGTGGCAGGGAGACCCCTGAAGGCCAGAAGGCTGTCCAAGCATTGAAGGATGTTTATGCTCAGTGGGTGCCTGAAGACAAAATCCTCACCACCAATCTTTGGTCTGCAGAGCTCTCCAAGCTTGCTGCCAACGCGTTCTTGGCCCAGAGAATTTCATCTGTCAATGCCATGTCTGCTCTTTGTGAGGCTACAGGGGCCAATGTTGCACAAGTGTCATATGCTGTTGGCAAGGATAGTAGGATAGGACCAAAGTTCCTTAATGGTAGTGTTGGTTTTGGTGGATCTTGCTTCCAGAAGGATATCCTGAATCTGGTTTACATCTGCGAATGCAATGGCCTTCCAGAGGTGGCAGAGTACTGGAAACAGGTCATTAAGATCAATGATTATCAGAAGAGCCGTTTTGTGAACCGTGTTGTTGCTTCCATGTTTAACACAGTGTCCAAGAAGAAGATTGCCATTCTTGGTTTTGCCTTCAAGAAAGATACTGGTGACACTAGGGAGACCCCCGCTATTGATGTGTGCCAGGGGTTGTTGGGTGACAACGCCGACCTGAGCATATATGACCCACAGGTTACTGAAGACCAGATCAAGATGGATCTCACATCGAAGAAATTTGACTGGGACCATCCTCTTCACCTACGGCCGATGAGTGATACCACTACCCTAGAGAAGGTTCATGTGGTCAAGGATGCCTATGAGGCAGCAAAGGATTCCCATGGTGTTTGCATTCTGACCGAATGGGATGAGTTTAAGACTCTTGATTACCAGAAGATCTATGAGGGTATGCAGAAACCGGCATTCATATTTGATGGAAGGAACGTGGTTGATGCCAATAAATTGCGTGAGATTGGTTTTATTGTTTACTCAATTGGAAAGCCCCTGGATGCATGGCTGAATGACATGCCTGCTGTGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003979 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0006022 GO:0006023 GO:0006024 GO:0006065 GO:0006082 GO:0006139 GO:0006725 GO:0006793 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009225 GO:0009226 GO:0009664 GO:0009987 GO:0010393 GO:0016043 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0017144 GO:0018130 GO:0019438 GO:0019752 GO:0030203 GO:0030312 GO:0034641 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0045229 GO:0045488 GO:0046394 GO:0046398 GO:0046483 GO:0048046 GO:0052546 GO:0055086 GO:0055114 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0071944 GO:1901135 GO:1901137 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00040 ko00053 ko00520 ko01100 map00040 map00053 map00520 map01100

Pfam Domains

Protein Families

UDPG_MGDP_dh UDPG_MGDP_dh_C UDPG_MGDP_dh_N

Protein Analysis

482

Amino Acids

53.13

Weight (kDa)

5.49

Isoelectric Point (pI)

24.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPG_MGDP_dh_N	PF03721	3 - 187	1.1e-66	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
UDPG_MGDP_dh	PF00984	211 - 305	3.3e-31	UDP-glucose/GDP-mannose dehydrogenase family, central domain
UDPG_MGDP_dh_C	PF03720	329 - 453	2.6e-30	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0007609)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G29360 AT3G29360 AT5G15490 AT5G39320
fragaria_vesca	FvH4_7g08190
malus_domestica	MD00G1075000.v1.1 MD15G1316900.v1.1
prunus_persica	Prupe.3G257300_v2.0.a1 Prupe.3G257300_v2.0.a1 Prupe.3G257300_v2.0.a1 Prupe.7G028000_v2.0.a1
pyrus_communis	pycom01g06430 pycom15g27960
rosa_chinensis	RchiOBHm_Chr1g0340961
rosa_laevigata	RLG00000029054
rosa_multiflora	Rmu_sc0001211.1_g000083 Rmu_sc0002200.1_g000046
rosa_roxburghii	Rroxscaffold_4G00311610
rosa_rugosa	Rorug01G0160500.1
rosa_samantha	Rh1AG175200 Rh1BG143500 Rh1CG163200 Rh1DG175100
rosa_wichuraiana	Rw1G014700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	598
AccB7I	CCANNNNNTGG	1 cut(s)	630
AccII	CGCG	1 cut(s)	665
AciI	CCGC	1 cut(s)	1038
AclWI	GGATC	3 cut(s)	525, 820, 1134
AcoI	YGGCCR	1 cut(s)	1172
AcsI	RAATTY	4 cut(s)	456, 473, 681, 1142
AcuI	CTGAAG	4 cut(s)	187, 570, 624, 1128
AfaI	GTAC	1 cut(s)	887
AfiI	CCNNNNNNNGG	4 cut(s)	630, 841, 874, 1201
AflII	CTTAAG	1 cut(s)	65
AflIII	ACRYGT	1 cut(s)	663
AgsI	TTSAA	3 cut(s)	83, 577, 1006
AjnI	CCWGG	3 cut(s)	154, 1053, 1410
AjuI	GAANNNNNNNTTGG	2 cut(s)	441, 473
AleI	CACNNNNGTG	2 cut(s)	67, 212
AluBI	AGCT	4 cut(s)	236, 401, 643, 652
AluI	AGCT	4 cut(s)	236, 401, 643, 652
Alw21I	GWGCWC	1 cut(s)	645
Alw26I	GTCTC	3 cut(s)	256, 536, 1025
AlwI	GGATC	3 cut(s)	525, 820, 1134
AoxI	GGCC	5 cut(s)	553, 672, 726, 865, 1172
ApeKI	GCWGC	4 cut(s)	299, 326, 656, 1232
ApoI	RAATTY	4 cut(s)	456, 473, 681, 1142
Asp700I	GAANNNNTTC	1 cut(s)	197
AspS9I	GGNCC	5 cut(s)	41, 673, 726, 776, 1153
AsuC2I	CCSGG	1 cut(s)	515
AsuHPI	GGTGA	6 cut(s)	16, 503, 610, 1031, 1079, 1157
AvaII	GGWCC	3 cut(s)	41, 776, 1153
BaeGI	GKGCMC	1 cut(s)	74
BanI	GGYRCC	1 cut(s)	598
BanII	GRGCYC	1 cut(s)	645
BauI	CACGAG	1 cut(s)	342
BbsI	GAAGAC	3 cut(s)	507, 612, 1116
Bbv12I	GWGCWC	1 cut(s)	645
BbvCI	CCTCAGC	2 cut(s)	402, 483
BbvI	GCAGC	4 cut(s)	311, 313, 643, 1244
BccI	CCATC	5 cut(s)	43, 223, 1117, 1164, 1334
BceAI	ACGGC	2 cut(s)	912, 1187
BciT130I	CCWGG	3 cut(s)	156, 1055, 1412
BcnI	CCSGG	1 cut(s)	515
BcoDI	GTCTC	3 cut(s)	256, 536, 1025
BfaI	CTAG	2 cut(s)	1026, 1196
BfmI	CTRYAG	2 cut(s)	636, 720
BfrI	CTTAAG	1 cut(s)	65
BglI	GCCNNNNNGGC	1 cut(s)	1229
BglII	AGATCT	2 cut(s)	9, 1302
BisI	GCNGC	4 cut(s)	300, 327, 657, 1233
BlsI	GCNGC	4 cut(s)	301, 328, 658, 1234
BmcAI	AGTACT	1 cut(s)	887
Bme1390I	CCNGG	4 cut(s)	156, 515, 1055, 1412
Bme18I	GGWCC	3 cut(s)	41, 776, 1153
BmgT120I	GGNCC	5 cut(s)	41, 673, 726, 776, 1153
BmiI	GGNNCC	4 cut(s)	42, 600, 727, 1154
BmrFI	CCNGG	4 cut(s)	156, 515, 1055, 1412
BmrI	ACTGGG	2 cut(s)	383, 1159
BmsI	GCATC	4 cut(s)	109, 1210, 1348, 1405
BmuI	ACTGGG	2 cut(s)	383, 1159
BpiI	GAAGAC	3 cut(s)	507, 612, 1116
BplI	GAGNNNNNCTC	2 cut(s)	313, 345
Bpu10I	CCTNAGC	3 cut(s)	402, 483, 1082
BpuMI	CCSGG	1 cut(s)	515
BsaBI	GATNNNNATC	1 cut(s)	102
BsaI	GGTCTC	2 cut(s)	536, 1025
BsaJI	CCNNGG	5 cut(s)	184, 210, 1054, 1246, 1410
Bsc4I	CCNNNNNNNGG	4 cut(s)	630, 841, 874, 1201
Bse118I	RCCGGY	1 cut(s)	1324
Bse1I	ACTGG	4 cut(s)	389, 893, 1021, 1154
Bse3DI	GCAATG	1 cut(s)	868
Bse8I	GATNNNNATC	1 cut(s)	102
BseBI	CCWGG	3 cut(s)	156, 1055, 1412
BseDI	CCNNGG	5 cut(s)	184, 210, 1054, 1246, 1410
BseGI	GGATG	6 cut(s)	223, 586, 1156, 1225, 1279, 1420
BseJI	GATNNNNATC	1 cut(s)	102
BseLI	CCNNNNNNNGG	4 cut(s)	630, 841, 874, 1201
BseMI	GCAATG	1 cut(s)	868
BseMII	CTCAG	4 cut(s)	393, 474, 605, 1073
BseNI	ACTGG	4 cut(s)	389, 893, 1021, 1154
BseSI	GKGCMC	1 cut(s)	74
BseX3I	CGGCCG	1 cut(s)	1172
BseXI	GCAGC	4 cut(s)	311, 313, 643, 1244
Bsh1236I	CGCG	1 cut(s)	665
Bsh1285I	CGRYCG	1 cut(s)	1175
BshFI	GGCC	5 cut(s)	555, 674, 728, 867, 1174
BshNI	GGYRCC	1 cut(s)	598
BsiEI	CGRYCG	1 cut(s)	1175
BsiHKAI	GWGCWC	1 cut(s)	645
BsiSI	CCGG	2 cut(s)	515, 1325
BslFI	GGGAC	2 cut(s)	371, 1166
BslI	CCNNNNNNNGG	4 cut(s)	630, 841, 874, 1201
BsmAI	GTCTC	3 cut(s)	256, 536, 1025
BsmFI	GGGAC	2 cut(s)	371, 1166
BsmI	GAATGC	3 cut(s)	863, 1257, 1328
BsnI	GGCC	5 cut(s)	555, 674, 728, 867, 1174
Bso31I	GGTCTC	2 cut(s)	536, 1025
Bsp1286I	GDGCHC	2 cut(s)	74, 645
Bsp143I	GATC	9 cut(s)	9, 97, 304, 517, 812, 906, 1116, 1126, 1302
Bsp19I	CCATGG	1 cut(s)	1246
BspACI	CCGC	1 cut(s)	1038
BspANI	GGCC	5 cut(s)	555, 674, 728, 867, 1174
BspCNI	CTCAG	4 cut(s)	394, 475, 604, 1074
BspFNI	CGCG	1 cut(s)	665
BspLI	GGNNCC	4 cut(s)	42, 600, 727, 1154
BspMAI	CTGCAG	1 cut(s)	640
BspPI	GGATC	3 cut(s)	525, 820, 1134
BspQI	GCTCTTC	1 cut(s)	917
BspT107I	GGYRCC	1 cut(s)	598
BspTI	CTTAAG	1 cut(s)	65
BspTNI	GGTCTC	2 cut(s)	536, 1025
BsrDI	GCAATG	1 cut(s)	868
BsrFI	RCCGGY	1 cut(s)	1324
BsrI	ACTGG	4 cut(s)	389, 893, 1021, 1154
BssAI	RCCGGY	1 cut(s)	1324
BssECI	CCNNGG	5 cut(s)	184, 210, 1054, 1246, 1410
BssMI	GATC	9 cut(s)	9, 97, 304, 517, 812, 906, 1116, 1126, 1302
BssSI	CACGAG	1 cut(s)	342
BssT1I	CCWWGG	2 cut(s)	210, 1246
Bst2BI	CACGAG	1 cut(s)	342
Bst2UI	CCWGG	3 cut(s)	156, 1055, 1412
Bst4CI	ACNGT	4 cut(s)	131, 385, 941, 967
Bst6I	CTCTTC	3 cut(s)	203, 917, 1167
BstAFI	CTTAAG	1 cut(s)	65
BstAPI	GCANNNNNTGC	1 cut(s)	59
BstC8I	GCNNGC	3 cut(s)	292, 654, 1437
BstDEI	CTNAG	4 cut(s)	402, 483, 591, 1082
BstDSI	CCRYGG	1 cut(s)	1246
BstENI	CCTNNNNNAGG	2 cut(s)	872, 1199
BstF5I	GGATG	6 cut(s)	223, 586, 1156, 1225, 1279, 1420
BstFNI	CGCG	1 cut(s)	665
BstKTI	GATC	9 cut(s)	12, 100, 307, 520, 815, 909, 1119, 1129, 1305
BstMAI	GTCTC	3 cut(s)	256, 536, 1025
BstMBI	GATC	9 cut(s)	9, 97, 304, 517, 812, 906, 1116, 1126, 1302
BstMCI	CGRYCG	1 cut(s)	1175
BstNI	CCWGG	3 cut(s)	156, 1055, 1412
BstNSI	RCATGY	1 cut(s)	1435
BstSCI	CCNGG	4 cut(s)	154, 513, 1053, 1410
BstSFI	CTRYAG	2 cut(s)	636, 720
BstSLI	GKGCMC	1 cut(s)	74
BstUI	CGCG	1 cut(s)	665
BstV1I	GCAGC	4 cut(s)	311, 313, 643, 1244
BstV2I	GAAGAC	3 cut(s)	507, 612, 1116
BstX2I	RGATCY	4 cut(s)	9, 812, 1126, 1302
BstYI	RGATCY	4 cut(s)	9, 812, 1126, 1302
BstZI	CGGCCG	1 cut(s)	1172
BsuRI	GGCC	5 cut(s)	555, 674, 728, 867, 1174
BtgI	CCRYGG	1 cut(s)	1246
BtsCI	GGATG	6 cut(s)	223, 586, 1156, 1225, 1279, 1420
BtsI	GCAGTG	2 cut(s)	60, 185
BtsIMutI	CAGTG	5 cut(s)	60, 136, 185, 599, 972
Cac8I	GCNNGC	3 cut(s)	292, 654, 1437
Cfr10I	RCCGGY	1 cut(s)	1324
Cfr13I	GGNCC	5 cut(s)	41, 673, 726, 776, 1153
Csp6I	GTAC	1 cut(s)	886
CviAII	CATG	6 cut(s)	700, 955, 1208, 1247, 1419, 1432
CviQI	GTAC	1 cut(s)	886
DdeI	CTNAG	4 cut(s)	402, 483, 591, 1082
DpnI	GATC	9 cut(s)	11, 99, 306, 519, 814, 908, 1118, 1128, 1304
DpnII	GATC	9 cut(s)	9, 97, 304, 517, 812, 906, 1116, 1126, 1302
EaeI	YGGCCR	1 cut(s)	1172
EagI	CGGCCG	1 cut(s)	1172
Eam1104I	CTCTTC	3 cut(s)	203, 917, 1167
EarI	CTCTTC	3 cut(s)	203, 917, 1167
Ecl136II	GAGCTC	1 cut(s)	643
EclXI	CGGCCG	1 cut(s)	1172
Eco130I	CCWWGG	2 cut(s)	210, 1246
Eco24I	GRGCYC	1 cut(s)	645
Eco31I	GGTCTC	2 cut(s)	536, 1025
Eco32I	GATATC	1 cut(s)	832
Eco47I	GGWCC	3 cut(s)	41, 776, 1153
Eco52I	CGGCCG	1 cut(s)	1172
Eco53kI	GAGCTC	1 cut(s)	643
Eco57I	CTGAAG	4 cut(s)	187, 570, 624, 1128
EcoICRI	GAGCTC	1 cut(s)	643
EcoNI	CCTNNNNNAGG	2 cut(s)	872, 1199
EcoO109I	RGGNCCY	1 cut(s)	41
EcoRII	CCWGG	3 cut(s)	154, 1053, 1410
EcoRV	GATATC	1 cut(s)	832
EcoT14I	CCWWGG	2 cut(s)	210, 1246
EcoT22I	ATGCAT	1 cut(s)	1420
EcoT38I	GRGCYC	1 cut(s)	645
ErhI	CCWWGG	2 cut(s)	210, 1246
FaeI	CATG	6 cut(s)	703, 958, 1211, 1250, 1422, 1435
FalI	AAGNNNNNCTT	2 cut(s)	182, 214
FaqI	GGGAC	2 cut(s)	371, 1166
FatI	CATG	6 cut(s)	699, 954, 1207, 1246, 1418, 1431
FauI	CCCGC	1 cut(s)	1045
FauNDI	CATATG	1 cut(s)	748
Fnu4HI	GCNGC	4 cut(s)	300, 327, 657, 1233
FokI	GGATG	6 cut(s)	230, 593, 1143, 1232, 1286, 1427
FriOI	GRGCYC	1 cut(s)	645
Fsp4HI	GCNGC	4 cut(s)	300, 327, 657, 1233
FspBI	CTAG	2 cut(s)	1026, 1196
GluI	GCNGC	4 cut(s)	300, 327, 657, 1233
HaeIII	GGCC	5 cut(s)	555, 674, 728, 867, 1174
HapII	CCGG	2 cut(s)	515, 1325
Hin1II	CATG	6 cut(s)	703, 958, 1211, 1250, 1422, 1435
HincII	GTYRAC	1 cut(s)	259
HindII	GTYRAC	1 cut(s)	259
HindIII	AAGCTT	1 cut(s)	650
HinfI	GANTC	3 cut(s)	838, 1241, 1285
HpaII	CCGG	2 cut(s)	515, 1325
HphI	GGTGA	6 cut(s)	16, 503, 610, 1031, 1079, 1157
Hpy166II	GTNNAC	4 cut(s)	259, 847, 937, 1393
Hpy188I	TCNGA	5 cut(s)	108, 309, 442, 921, 1263
Hpy188III	TCNNGA	7 cut(s)	161, 823, 835, 872, 1006, 1120, 1289
Hpy8I	GTNNAC	4 cut(s)	259, 847, 937, 1393
HpyAV	CCTTC	8 cut(s)	545, 553, 571, 820, 878, 1012, 1195, 1338
HpyCH4III	ACNGT	4 cut(s)	131, 385, 941, 967
HpyCH4IV	ACGT	1 cut(s)	1350
HpyCH4V	TGCA	9 cut(s)	18, 62, 494, 638, 737, 861, 1257, 1318, 1418
HpyF3I	CTNAG	4 cut(s)	402, 483, 591, 1082
HpySE526I	ACGT	1 cut(s)	1350
Hsp92II	CATG	6 cut(s)	703, 958, 1211, 1250, 1422, 1435
Kzo9I	GATC	9 cut(s)	9, 97, 304, 517, 812, 906, 1116, 1126, 1302
LguI	GCTCTTC	1 cut(s)	917
LmnI	GCTCC	1 cut(s)	287
Lsp1109I	GCAGC	4 cut(s)	311, 313, 643, 1244
LweI	GCATC	4 cut(s)	109, 1210, 1348, 1405
MaeI	CTAG	2 cut(s)	1026, 1196
MaeII	ACGT	1 cut(s)	1350
MaeIII	GTNAC	4 cut(s)	131, 1019, 1067, 1102
MalI	GATC	9 cut(s)	11, 99, 306, 519, 814, 908, 1118, 1128, 1304
MboI	GATC	9 cut(s)	9, 97, 304, 517, 812, 906, 1116, 1126, 1302
MfeI	CAATTG	1 cut(s)	1398
MflI	RGATCY	4 cut(s)	9, 812, 1126, 1302
MhlI	GDGCHC	2 cut(s)	74, 645
MluCI	AATT	9 cut(s)	144, 363, 449, 456, 473, 681, 1142, 1367, 1398
MluI	ACGCGT	1 cut(s)	663
MlyI	GAGTC	1 cut(s)	1279
Mph1103I	ATGCAT	1 cut(s)	1420
MroXI	GAANNNNTTC	1 cut(s)	197
MseI	TTAA	6 cut(s)	66, 102, 789, 903, 960, 1281
MslI	CAYNNNNRTG	2 cut(s)	67, 212
MspA1I	CMGCKG	1 cut(s)	401
MspCI	CTTAAG	1 cut(s)	65
MspI	CCGG	2 cut(s)	515, 1325
MspR9I	CCNGG	4 cut(s)	156, 515, 1055, 1412
MunI	CAATTG	1 cut(s)	1398
Mva1269I	GAATGC	3 cut(s)	863, 1257, 1328
MvaI	CCWGG	3 cut(s)	156, 1055, 1412
MvnI	CGCG	1 cut(s)	665
NciI	CCSGG	1 cut(s)	515
NcoI	CCATGG	1 cut(s)	1246
NdeI	CATATG	1 cut(s)	748
NdeII	GATC	9 cut(s)	9, 97, 304, 517, 812, 906, 1116, 1126, 1302
NlaIII	CATG	6 cut(s)	703, 958, 1211, 1250, 1422, 1435
NlaIV	GGNNCC	4 cut(s)	42, 600, 727, 1154
NmeAIII	GCCGAG	1 cut(s)	209
NmuCI	GTSAC	3 cut(s)	131, 1019, 1067
NsiI	ATGCAT	1 cut(s)	1420
NspI	RCATGY	1 cut(s)	1435
OliI	CACNNNNGTG	2 cut(s)	67, 212
PciSI	GCTCTTC	1 cut(s)	917
PctI	GAATGC	3 cut(s)	863, 1257, 1328
PdmI	GAANNNNTTC	1 cut(s)	197
PfeI	GAWTC	2 cut(s)	838, 1241
PflMI	CCANNNNNTGG	1 cut(s)	630
PkrI	GCNGC	4 cut(s)	301, 328, 658, 1234
PleI	GAGTC	1 cut(s)	1279
PpsI	GAGTC	1 cut(s)	1279
PpuMI	RGGWCCY	1 cut(s)	41
Psp124BI	GAGCTC	1 cut(s)	645
Psp5II	RGGWCCY	1 cut(s)	41
Psp6I	CCWGG	3 cut(s)	154, 1053, 1410
PspGI	CCWGG	3 cut(s)	154, 1053, 1410
PspN4I	GGNNCC	4 cut(s)	42, 600, 727, 1154
PspPI	GGNCC	5 cut(s)	41, 673, 726, 776, 1153
PspPPI	RGGWCCY	1 cut(s)	41
PstI	CTGCAG	1 cut(s)	640
PsuI	RGATCY	4 cut(s)	9, 812, 1126, 1302
PvuII	CAGCTG	1 cut(s)	401
RsaI	GTAC	1 cut(s)	887
RsaNI	GTAC	1 cut(s)	886
RseI	CAYNNNNRTG	2 cut(s)	67, 212
SacI	GAGCTC	1 cut(s)	645
SapI	GCTCTTC	1 cut(s)	917
SaqAI	TTAA	6 cut(s)	66, 102, 789, 903, 960, 1281
SatI	GCNGC	4 cut(s)	300, 327, 657, 1233
Sau3AI	GATC	9 cut(s)	9, 97, 304, 517, 812, 906, 1116, 1126, 1302
Sau96I	GGNCC	5 cut(s)	41, 673, 726, 776, 1153
ScaI	AGTACT	1 cut(s)	887
SchI	GAGTC	1 cut(s)	1279
ScrFI	CCNGG	4 cut(s)	156, 515, 1055, 1412
SduI	GDGCHC	2 cut(s)	74, 645
SfaNI	GCATC	4 cut(s)	109, 1210, 1348, 1405
SfcI	CTRYAG	2 cut(s)	636, 720
SinI	GGWCC	3 cut(s)	41, 776, 1153
SmiMI	CAYNNNNRTG	2 cut(s)	67, 212
SmlI	CTYRAG	1 cut(s)	65
SmoI	CTYRAG	1 cut(s)	65
Sse9I	AATT	9 cut(s)	144, 363, 449, 456, 473, 681, 1142, 1367, 1398
SsiI	CCGC	1 cut(s)	1038
SspMI	CTAG	2 cut(s)	1026, 1196
SstI	GAGCTC	1 cut(s)	645
StyD4I	CCNGG	4 cut(s)	154, 513, 1053, 1410
StyI	CCWWGG	2 cut(s)	210, 1246
TaaI	ACNGT	4 cut(s)	131, 385, 941, 967
TaiI	ACGT	1 cut(s)	1353
TaqI	TCGA	4 cut(s)	331, 380, 498, 1136
TaqII	GACCGA	1 cut(s)	1280
TasI	AATT	9 cut(s)	144, 363, 449, 456, 473, 681, 1142, 1367, 1398
TatI	WGTACW	1 cut(s)	885
TfiI	GAWTC	2 cut(s)	838, 1241
Tru1I	TTAA	6 cut(s)	66, 102, 789, 903, 960, 1281
Tru9I	TTAA	6 cut(s)	66, 102, 789, 903, 960, 1281
TscAI	CASTG	5 cut(s)	60, 136, 185, 599, 972
TseFI	GTSAC	3 cut(s)	131, 1019, 1067
TseI	GCWGC	4 cut(s)	299, 326, 656, 1232
Tsp45I	GTSAC	3 cut(s)	131, 1019, 1067
TspDTI	ATGAA	3 cut(s)	675, 1196, 1321
TspGWI	ACGGA	1 cut(s)	127
TspRI	CASTG	5 cut(s)	60, 136, 185, 599, 972
Van91I	CCANNNNNTGG	1 cut(s)	630
Vha464I	CTTAAG	1 cut(s)	65
VpaK11BI	GGWCC	3 cut(s)	41, 776, 1153
XagI	CCTNNNNNAGG	2 cut(s)	872, 1199
XapI	RAATTY	4 cut(s)	456, 473, 681, 1142
XceI	RCATGY	1 cut(s)	1435
XcmI	CCANNNNNNNNNTGG	1 cut(s)	667
XmnI	GAANNNNTTC	1 cut(s)	197
XspI	CTAG	2 cut(s)	1026, 1196
ZrmI	AGTACT	1 cut(s)	887
Zsp2I	ATGCAT	1 cut(s)	1420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.