Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0009439

Physical Location & Seq

Genomic Coordinates Reverse (-)

32123562 .. 32127403

Gene Structure 3842 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1146800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGATTGTCTCCGTCGCCGTTGGTCAGCCGTTAACTTTGTGGCAGTCTTGTGGCTGTAGAGTGGCGTCAAGGGAAAAGGATAGCGCATCTGTTTACCAAAGGAGAAGTAGCATGAGAGTTAGAGTAAGACCAGCGCGGTCAGTTCTGGCAGAGGCTGAGGCGAGACCAGCAACACCTGCGCTGAAAGTGCAGATCTATCGGGGCGGCGGGGATCGAATGAACGACCTTCAGGCGGAGGCAAGGGCCCTGGCACGTGCTGCAAATGCCTCCATTTACAGCCCCGAACTGCTTGTGGGCAAGTACGGCTCTCGCCCAGTCAAGGTAATTCGGAGGACTCTTGAAATTTTGATATCGCTGGGTTCATTTGGGTTAAAGCTGTTGGTGGACCAAAGGAATGGCGCGATCGATCAGAACAAACGACTGCGTGCCGCCGAGCTCAGGACAATTTTCACTCGTTTGGGACCTACGTTTGTCAAATTAGGTCAGGCCTTGTCCACAAGGCCTGACATTTGCCCACCCGAGTATCTGGAGGAGCTCTCTGAGCTTCAGGATGCTTTGCCCACATTTCCAGATGCAGAAGCATTTTCCTGCATCGAAAGGGAGTTGGAATTGCCACTTGACTCTGTTTTCTCATGCATATCTCCATCCCCAATTGCGGCAGCTAGTTTAGGTCAAGTCTACAAAGCTCATCTTAAGTATTCTGGGCAGGTTGTTGCTGTAAAGGTGCAACGTCCGGGCATTGAAGAAGCGATAGGACTTGACTTCTATCTCATAAGAGGTCTAGGATTTTTCATAAATAAATATGTTGACGTCATAACCACTGATGTTATAGCACTTATTGATGAATTTGCACGCAGAGTCTATCAAGAGCTGAACTATGTTCAGGAGGGACAAAATGCGAGGAGGTTTAAGAAATTGTATGCTGACAAGGCAGAGGTTCTGGTCCCAGATATTTTCTGGGATTATACCAGCAAAAAAGTGTTGACAATGGAGTGGGTAGATGGAGTTAAATTAAACGAGCAGGCTGCAATTGAGAGACAAGGGTTGAAAGTATTGGATCTCGTGAACACTGGCATACAGTGCAGCCTCAGACAACTACTTGAGTATGGATATTTTCATGCAGATCCTCATCCTGGTAATCTGTTGGCAACAACTGATGGAAAGCTTGCCTTTCTTGATTTTGGAATGATGAGTGAGACGCCAGAAGAAGCTAGATTTGCTATCATCGGTCATGTTGTTCACTTGGTTAATCGGGATTATGAAGCTATGGCCCGTGACTACTATGCTCTAGATTTCTTGTCACCTGATGTAGACGTTTCTCCAATTGTACCGGCACTTCGTAACTTCTTTGATGATGTGCTTAATTCAACTGTGAGTGAACTTAATTTCAAGACACTGGTCGACGGTTTAGGTGCTGTCTTGTATCAATATCCATTCAATGTCCCAGCTTATTATGCTTTGATATTAAGGTCACTTACTGTACTAGAAGGTCTAGCCCTTGATGCTGATCCTAATTTCAAGGTGCTGGCTGCTTCATACCCGTATTTCGCTAAAAGACTTCTCACGGATCCAAACCCATATCTCAGAGATGCTCTGATTGAGTTGCTTTTTAAGGATGGGAAGCTTAGGCATGGATTCTGTTGCCATCTTTATACTTATATTGGATGGTGGAACCGACTTGAAAACCTGTTGGTACAGGGAAGAAAAGATAAAGATTTCTCTGCAAAAGATGCTTTACAACCTGTGTTGAAGTTAATATTGGGGTCAGATGGTGAAGAACTCCGAACTTTAGTTATTAAGGAGGCTGTTCGCGTCACTGAAGCTTTTGTTTGGGGTACGTTTATTGATACCTACAATTATATGCCCAATTTTATGAGAGCTGCAATTGCTAATGGCAATGCTAATGGACCACTTGTAATGAGCATTGCTGAACAAGAAAGCATGACTGAGCTCCGAGATCAAGTACTCCGGATTTGGGGACTTCTACAGTCCTCAGAAAATTTTGATCCAGCCCTTTTGCAGCCCATTTTACAAGTCCTTCAACAACCTGAGGCACGGAACCTGGGGGGGCGTGTCATAGGCGGGATCACCCAACGTCTTGCAGCACGGTTGCTGCAACAAGTACTTCGAGTGCCAACAACGGTTTCTGCTTTGACTTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0006995 GO:0006996 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009639 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009987 GO:0009991 GO:0010035 GO:0010114 GO:0010287 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0031279 GO:0031647 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0036211 GO:0042221 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043562 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0050821 GO:0050896 GO:0051716 GO:0051726 GO:0065007 GO:0065008 GO:0065009 GO:0071496 GO:0071704 GO:0071840 GO:0080177 GO:0080183 GO:0097472 GO:0140096 GO:1901564 GO:1901700 GO:1902171

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1

Protein Analysis

721

Amino Acids

80.57

Weight (kDa)

6.28

Isoelectric Point (pI)

43.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	182 - 425	3.6e-75	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79600
fragaria_vesca	FvH4_5g27020 FvH4_5g27020 FvH4_5g27020 FvH4_5g27020 FvH4_5g27020 FvH4_5g27020
malus_domestica	MD00G1146800.v1.1
prunus_persica	Prupe.5G000100_v2.0.a1
pyrus_communis	pycom06g00090
rosa_chinensis	RchiOBHm_Chr7g0217991
rosa_laevigata	RLG00000002426
rosa_multiflora	Rmu_sc0000870.1_g000077 Rmu_sc0008242.1_g000006
rosa_roxburghii	Rroxscaffold_3G00241510
rosa_rugosa	Rorug07G0173000
rosa_samantha	Rh7AG315100 Rh7BG305500 Rh7CG332500 Rh7DG313500
rosa_wichuraiana	Rw7G026630 Rw7G026710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	184
AatII	GACGTC	1 cut(s)	813
Acc36I	ACCTGC	2 cut(s)	184, 697
AccI	GTMKAC	3 cut(s)	678, 1311, 1401
AccII	CGCG	3 cut(s)	136, 401, 1812
AccIII	TCCGGA	1 cut(s)	1968
AciI	CCGC	7 cut(s)	136, 204, 207, 233, 429, 656, 2082
AclWI	GGATC	8 cut(s)	219, 1065, 1118, 1502, 1562, 1575, 2000, 2093
AcsI	RAATTY	3 cut(s)	342, 845, 1999
AcuI	CTGAAG	3 cut(s)	212, 530, 1839
AcvI	CACGTG	1 cut(s)	254
AcyI	GRCGYC	3 cut(s)	65, 810, 1199
AfaI	GTAC	7 cut(s)	302, 1329, 1482, 1695, 1837, 1965, 2124
AfiI	CCNNNNNNNGG	6 cut(s)	232, 319, 438, 655, 1133, 1975
AflII	CTTAAG	1 cut(s)	692
AjnI	CCWGG	3 cut(s)	246, 1132, 2061
AjuI	GAANNNNNNNTTGG	4 cut(s)	1742, 1774, 2128, 2160
Alw21I	GWGCWC	3 cut(s)	438, 537, 1953
Alw26I	GTCTC	4 cut(s)	13, 157, 1030, 1190
AlwI	GGATC	8 cut(s)	219, 1065, 1118, 1502, 1562, 1575, 2000, 2093
AlwNI	CAGNNNCTG	1 cut(s)	155
Ama87I	CYCGRG	1 cut(s)	518
Aor13HI	TCCGGA	1 cut(s)	1968
AoxI	GGCC	4 cut(s)	243, 486, 500, 1269
ApaI	GGGCCC	1 cut(s)	247
ApeKI	GCWGC	9 cut(s)	257, 659, 1025, 1083, 1529, 1880, 2020, 2102, 2113
ApoI	RAATTY	3 cut(s)	342, 845, 1999
AspLEI	GCGC	4 cut(s)	86, 136, 181, 401
AspS9I	GGNCC	7 cut(s)	243, 244, 385, 461, 943, 1270, 1907
AsuC2I	CCSGG	1 cut(s)	735
AsuHPI	GGTGA	3 cut(s)	1293, 1784, 2080
AvaI	CYCGRG	1 cut(s)	518
AvaII	GGWCC	4 cut(s)	385, 461, 943, 1907
AxyI	CCTNAGG	1 cut(s)	2049
BaeGI	GKGCMC	1 cut(s)	247
BaeI	ACNNNNGTAYC	2 cut(s)	506, 539
BamHI	GGATCC	1 cut(s)	1567
BanII	GRGCYC	4 cut(s)	247, 438, 537, 1953
BarI	GAAGNNNNNNTAC	2 cut(s)	1320, 1352
BauI	CACGAG	1 cut(s)	1061
BbrPI	CACGTG	1 cut(s)	254
Bbv12I	GWGCWC	3 cut(s)	438, 537, 1953
BbvCI	CCTCAGC	1 cut(s)	156
BbvI	GCAGC	9 cut(s)	244, 671, 1012, 1095, 1516, 1867, 2032, 2100, 2114
BccI	CCATC	7 cut(s)	652, 995, 1151, 1610, 1653, 1659, 1763
BceAI	ACGGC	3 cut(s)	2, 13, 319
BcgI	CGANNNNNNTGC	4 cut(s)	179, 213, 1007, 1041
BciT130I	CCWGG	3 cut(s)	248, 1134, 2063
BcnI	CCSGG	1 cut(s)	735
BcoDI	GTCTC	4 cut(s)	13, 157, 1030, 1190
BfaI	CTAG	6 cut(s)	663, 782, 1212, 1289, 1484, 1493
BfmI	CTRYAG	2 cut(s)	55, 1985
BfrI	CTTAAG	1 cut(s)	692
BfuAI	ACCTGC	2 cut(s)	184, 697
BglII	AGATCT	1 cut(s)	192
BmcAI	AGTACT	2 cut(s)	1965, 2124
Bme1390I	CCNGG	4 cut(s)	248, 735, 1134, 2063
Bme18I	GGWCC	4 cut(s)	385, 461, 943, 1907
BmeT110I	CYCGRG	1 cut(s)	518
BmgT120I	GGNCC	7 cut(s)	243, 244, 385, 461, 943, 1270, 1907
BmiI	GGNNCC	6 cut(s)	245, 462, 945, 1569, 1673, 2060
BmrFI	CCNGG	4 cut(s)	248, 735, 1134, 2063
BmrI	ACTGGG	1 cut(s)	308
BmsI	GCATC	7 cut(s)	95, 541, 562, 600, 1492, 1579, 1720
BmuI	ACTGGG	1 cut(s)	308
BoxI	GACNNNNGTC	1 cut(s)	1397
BplI	GAGNNNNNCTC	2 cut(s)	521, 553
BpmI	CTGGAG	1 cut(s)	548
Bpu10I	CCTNAGC	3 cut(s)	156, 437, 1625
BpuEI	CTTGAG	1 cut(s)	1121
BpuMI	CCSGG	1 cut(s)	735
Bsa29I	ATCGAT	1 cut(s)	405
BsaAI	YACGTR	1 cut(s)	254
BsaBI	GATNNNNATC	2 cut(s)	1128, 1506
BsaHI	GRCGYC	3 cut(s)	65, 810, 1199
BsaI	GGTCTC	1 cut(s)	157
BsaJI	CCNNGG	2 cut(s)	246, 2062
BsaWI	WCCGGW	1 cut(s)	1968
Bsc4I	CCNNNNNNNGG	6 cut(s)	232, 319, 438, 655, 1133, 1975
Bse118I	RCCGGY	1 cut(s)	1330
Bse1I	ACTGG	3 cut(s)	314, 1075, 1401
Bse21I	CCTNAGG	1 cut(s)	2049
Bse3DI	GCAATG	2 cut(s)	1903, 1923
Bse8I	GATNNNNATC	2 cut(s)	1128, 1506
BseAI	TCCGGA	1 cut(s)	1968
BseBI	CCWGG	3 cut(s)	248, 1134, 2063
BseCI	ATCGAT	1 cut(s)	405
BseDI	CCNNGG	2 cut(s)	246, 2062
BseGI	GGATG	5 cut(s)	556, 644, 1129, 1621, 1670
BseJI	GATNNNNATC	2 cut(s)	1128, 1506
BseLI	CCNNNNNNNGG	6 cut(s)	232, 319, 438, 655, 1133, 1975
BseMI	GCAATG	2 cut(s)	1903, 1923
BseMII	CTCAG	8 cut(s)	147, 451, 531, 1102, 1597, 1938, 2007, 2040
BseNI	ACTGG	3 cut(s)	314, 1075, 1401
BseRI	GAGGAG	2 cut(s)	545, 916
BseSI	GKGCMC	1 cut(s)	247
BseXI	GCAGC	9 cut(s)	244, 671, 1012, 1095, 1516, 1867, 2032, 2100, 2114
BseYI	CCCAGC	2 cut(s)	355, 1444
BsgI	GTGCAG	2 cut(s)	209, 1102
Bsh1236I	CGCG	3 cut(s)	136, 401, 1812
Bsh1285I	CGRYCG	1 cut(s)	405
BshFI	GGCC	4 cut(s)	245, 488, 502, 1271
BshVI	ATCGAT	1 cut(s)	405
BsiEI	CGRYCG	1 cut(s)	405
BsiHKAI	GWGCWC	3 cut(s)	438, 537, 1953
BsiHKCI	CYCGRG	1 cut(s)	518
BsiSI	CCGG	3 cut(s)	734, 1331, 1969
BslFI	GGGAC	5 cut(s)	474, 903, 929, 1427, 1992
BslI	CCNNNNNNNGG	6 cut(s)	232, 319, 438, 655, 1133, 1975
BsmAI	GTCTC	4 cut(s)	13, 157, 1030, 1190
BsmBI	CGTCTC	1 cut(s)	1190
BsmFI	GGGAC	5 cut(s)	474, 903, 929, 1427, 1992
BsnI	GGCC	4 cut(s)	245, 488, 502, 1271
Bso31I	GGTCTC	1 cut(s)	157
BsoBI	CYCGRG	1 cut(s)	518
Bsp120I	GGGCCC	1 cut(s)	243
Bsp1286I	GDGCHC	4 cut(s)	247, 438, 537, 1953
Bsp13I	TCCGGA	1 cut(s)	1968
BspACI	CCGC	7 cut(s)	136, 204, 207, 233, 429, 656, 2082
BspANI	GGCC	4 cut(s)	245, 488, 502, 1271
BspCNI	CTCAG	8 cut(s)	148, 450, 532, 1101, 1596, 1939, 2006, 2041
BspDI	ATCGAT	1 cut(s)	405
BspEI	TCCGGA	1 cut(s)	1968
BspFNI	CGCG	3 cut(s)	136, 401, 1812
BspLI	GGNNCC	6 cut(s)	245, 462, 945, 1569, 1673, 2060
BspMI	ACCTGC	2 cut(s)	184, 697
BspPI	GGATC	8 cut(s)	219, 1065, 1118, 1502, 1562, 1575, 2000, 2093
BspTI	CTTAAG	1 cut(s)	692
BspTNI	GGTCTC	1 cut(s)	157
BsrDI	GCAATG	2 cut(s)	1903, 1923
BsrFI	RCCGGY	1 cut(s)	1330
BsrI	ACTGG	3 cut(s)	314, 1075, 1401
BssAI	RCCGGY	1 cut(s)	1330
BssECI	CCNNGG	2 cut(s)	246, 2062
BssNI	GRCGYC	3 cut(s)	65, 810, 1199
BssSI	CACGAG	1 cut(s)	1061
Bst2BI	CACGAG	1 cut(s)	1061
Bst2UI	CCWGG	3 cut(s)	248, 1134, 2063
Bst4CI	ACNGT	7 cut(s)	1080, 1372, 1406, 1480, 1989, 2109, 2143
BstACI	GRCGYC	3 cut(s)	65, 810, 1199
BstAFI	CTTAAG	1 cut(s)	692
BstAPI	GCANNNNNTGC	4 cut(s)	176, 257, 1080, 1730
BstBAI	YACGTR	1 cut(s)	254
BstC8I	GCNNGC	5 cut(s)	426, 853, 1023, 1167, 1527
BstDEI	CTNAG	9 cut(s)	156, 437, 540, 1088, 1583, 1625, 1947, 1993, 2049
BstF5I	GGATG	5 cut(s)	556, 644, 1129, 1621, 1670
BstFNI	CGCG	3 cut(s)	136, 401, 1812
BstHHI	GCGC	4 cut(s)	86, 136, 181, 401
BstMAI	GTCTC	4 cut(s)	13, 157, 1030, 1190
BstMCI	CGRYCG	1 cut(s)	405
BstNI	CCWGG	3 cut(s)	248, 1134, 2063
BstPAI	GACNNNNGTC	1 cut(s)	1397
BstSCI	CCNGG	4 cut(s)	246, 733, 1132, 2061
BstSFI	CTRYAG	2 cut(s)	55, 1985
BstSLI	GKGCMC	1 cut(s)	247
BstUI	CGCG	3 cut(s)	136, 401, 1812
BstV1I	GCAGC	9 cut(s)	244, 671, 1012, 1095, 1516, 1867, 2032, 2100, 2114
BstX2I	RGATCY	4 cut(s)	192, 1057, 1123, 1567
BstXI	CCANNNNNNTGG	1 cut(s)	395
BstYI	RGATCY	4 cut(s)	192, 1057, 1123, 1567
Bsu15I	ATCGAT	1 cut(s)	405
Bsu36I	CCTNAGG	1 cut(s)	2049
BsuRI	GGCC	4 cut(s)	245, 488, 502, 1271
BsuTUI	ATCGAT	1 cut(s)	405
BtsCI	GGATG	5 cut(s)	556, 644, 1129, 1621, 1670
BtsIMutI	CAGTG	5 cut(s)	819, 1068, 1085, 1394, 1815
BveI	ACCTGC	2 cut(s)	184, 697
Cac8I	GCNNGC	5 cut(s)	426, 853, 1023, 1167, 1527
CaiI	CAGNNNCTG	1 cut(s)	155
CfoI	GCGC	4 cut(s)	86, 136, 181, 401
Cfr10I	RCCGGY	1 cut(s)	1330
Cfr13I	GGNCC	7 cut(s)	243, 244, 385, 461, 943, 1270, 1907
ClaI	ATCGAT	1 cut(s)	405
CseI	GACGC	3 cut(s)	54, 1207, 1801
Csp6I	GTAC	7 cut(s)	301, 1328, 1481, 1694, 1836, 1964, 2123
CviAII	CATG	6 cut(s)	112, 633, 1118, 1232, 1631, 1942
CviQI	GTAC	7 cut(s)	301, 1328, 1481, 1694, 1836, 1964, 2123
DdeI	CTNAG	9 cut(s)	156, 437, 540, 1088, 1583, 1625, 1947, 1993, 2049
EciI	GGCGGA	1 cut(s)	248
Ecl136II	GAGCTC	3 cut(s)	436, 535, 1951
Eco147I	AGGCCT	2 cut(s)	488, 502
Eco24I	GRGCYC	4 cut(s)	247, 438, 537, 1953
Eco31I	GGTCTC	1 cut(s)	157
Eco32I	GATATC	1 cut(s)	351
Eco47I	GGWCC	4 cut(s)	385, 461, 943, 1907
Eco53kI	GAGCTC	3 cut(s)	436, 535, 1951
Eco57I	CTGAAG	3 cut(s)	212, 530, 1839
Eco72I	CACGTG	1 cut(s)	254
Eco81I	CCTNAGG	1 cut(s)	2049
Eco88I	CYCGRG	1 cut(s)	518
EcoICRI	GAGCTC	3 cut(s)	436, 535, 1951
EcoO109I	RGGNCCY	3 cut(s)	243, 244, 461
EcoRII	CCWGG	3 cut(s)	246, 1132, 2061
EcoRV	GATATC	1 cut(s)	351
EcoT22I	ATGCAT	1 cut(s)	638
EcoT38I	GRGCYC	4 cut(s)	247, 438, 537, 1953
Esp3I	CGTCTC	1 cut(s)	1190
FaeI	CATG	6 cut(s)	115, 636, 1121, 1235, 1634, 1945
FalI	AAGNNNNNCTT	4 cut(s)	675, 707, 1154, 1186
FaqI	GGGAC	5 cut(s)	474, 903, 929, 1427, 1992
FatI	CATG	6 cut(s)	111, 632, 1117, 1231, 1630, 1941
FauI	CCCGC	2 cut(s)	200, 2075
FblI	GTMKAC	3 cut(s)	678, 1311, 1401
FokI	GGATG	5 cut(s)	563, 631, 1116, 1628, 1677
FriOI	GRGCYC	4 cut(s)	247, 438, 537, 1953
FspBI	CTAG	6 cut(s)	663, 782, 1212, 1289, 1484, 1493
GlaI	GCGC	4 cut(s)	85, 135, 180, 400
GsaI	CCCAGC	2 cut(s)	359, 1448
GsuI	CTGGAG	1 cut(s)	548
HaeIII	GGCC	4 cut(s)	245, 488, 502, 1271
HapII	CCGG	3 cut(s)	734, 1331, 1969
HgaI	GACGC	3 cut(s)	54, 1207, 1801
HhaI	GCGC	4 cut(s)	86, 136, 181, 401
Hin1I	GRCGYC	3 cut(s)	65, 810, 1199
Hin1II	CATG	6 cut(s)	115, 636, 1121, 1235, 1634, 1945
Hin6I	GCGC	4 cut(s)	84, 134, 179, 399
HinP1I	GCGC	4 cut(s)	84, 134, 179, 399
HincII	GTYRAC	4 cut(s)	33, 808, 984, 1402
HindII	GTYRAC	4 cut(s)	33, 808, 984, 1402
HindIII	AAGCTT	3 cut(s)	1163, 1622, 1821
HinfI	GANTC	4 cut(s)	334, 620, 858, 1635
HpaI	GTTAAC	1 cut(s)	33
HpaII	CCGG	3 cut(s)	734, 1331, 1969
HphI	GGTGA	3 cut(s)	1293, 1784, 2080
Hpy99I	CGWCG	2 cut(s)	17, 1406
HpyAV	CCTTC	3 cut(s)	236, 1481, 2048
HpyCH4III	ACNGT	7 cut(s)	1080, 1372, 1406, 1480, 1989, 2109, 2143
HpyCH4IV	ACGT	7 cut(s)	253, 467, 730, 810, 1314, 1838, 2095
HpyF3I	CTNAG	9 cut(s)	156, 437, 540, 1088, 1583, 1625, 1947, 1993, 2049
HpySE526I	ACGT	7 cut(s)	253, 467, 730, 810, 1314, 1838, 2095
Hsp92I	GRCGYC	3 cut(s)	65, 810, 1199
Hsp92II	CATG	6 cut(s)	115, 636, 1121, 1235, 1634, 1945
HspAI	GCGC	4 cut(s)	84, 134, 179, 399
Kpn2I	TCCGGA	1 cut(s)	1968
KspAI	GTTAAC	1 cut(s)	33
LmnI	GCTCC	2 cut(s)	532, 1956
Lsp1109I	GCAGC	9 cut(s)	244, 671, 1012, 1095, 1516, 1867, 2032, 2100, 2114
LweI	GCATC	7 cut(s)	95, 541, 562, 600, 1492, 1579, 1720
MaeI	CTAG	6 cut(s)	663, 782, 1212, 1289, 1484, 1493
MaeII	ACGT	7 cut(s)	253, 467, 730, 810, 1314, 1838, 2095
MaeIII	GTNAC	5 cut(s)	1274, 1299, 1340, 1470, 1813
MboII	GAAGA	4 cut(s)	755, 1217, 1713, 1787
MfeI	CAATTG	4 cut(s)	651, 1029, 1323, 1884
MflI	RGATCY	4 cut(s)	192, 1057, 1123, 1567
MhlI	GDGCHC	4 cut(s)	247, 438, 537, 1953
MlyI	GAGTC	3 cut(s)	328, 614, 867
MmeI	TCCRAC	1 cut(s)	585
Mph1103I	ATGCAT	1 cut(s)	638
MroI	TCCGGA	1 cut(s)	1968
MspCI	CTTAAG	1 cut(s)	692
MspI	CCGG	3 cut(s)	734, 1331, 1969
MspR9I	CCNGG	4 cut(s)	248, 735, 1134, 2063
MunI	CAATTG	4 cut(s)	651, 1029, 1323, 1884
MvaI	CCWGG	3 cut(s)	248, 1134, 2063
MvnI	CGCG	3 cut(s)	136, 401, 1812
NciI	CCSGG	1 cut(s)	735
NlaIII	CATG	6 cut(s)	115, 636, 1121, 1235, 1634, 1945
NlaIV	GGNNCC	6 cut(s)	245, 462, 945, 1569, 1673, 2060
NmeAIII	GCCGAG	1 cut(s)	457
NmuCI	GTSAC	4 cut(s)	1274, 1299, 1470, 1813
NsiI	ATGCAT	1 cut(s)	638
PaqCI	CACCTGC	1 cut(s)	184
PceI	AGGCCT	2 cut(s)	488, 502
PfeI	GAWTC	1 cut(s)	1635
Ple19I	CGATCG	1 cut(s)	405
PleI	GAGTC	3 cut(s)	328, 614, 866
PmaCI	CACGTG	1 cut(s)	254
PmlI	CACGTG	1 cut(s)	254
PpsI	GAGTC	3 cut(s)	328, 614, 866
Ppu21I	YACGTR	1 cut(s)	254
PpuMI	RGGWCCY	1 cut(s)	461
PshAI	GACNNNNGTC	1 cut(s)	1397
Psp124BI	GAGCTC	3 cut(s)	438, 537, 1953
Psp5II	RGGWCCY	1 cut(s)	461
Psp6I	CCWGG	3 cut(s)	246, 1132, 2061
PspCI	CACGTG	1 cut(s)	254
PspFI	CCCAGC	2 cut(s)	355, 1444
PspGI	CCWGG	3 cut(s)	246, 1132, 2061
PspN4I	GGNNCC	6 cut(s)	245, 462, 945, 1569, 1673, 2060
PspOMI	GGGCCC	1 cut(s)	243
PspPI	GGNCC	7 cut(s)	243, 244, 385, 461, 943, 1270, 1907
PspPPI	RGGWCCY	1 cut(s)	461
PstNI	CAGNNNCTG	1 cut(s)	155
PsuI	RGATCY	4 cut(s)	192, 1057, 1123, 1567
PvuI	CGATCG	1 cut(s)	405
RsaI	GTAC	7 cut(s)	302, 1329, 1482, 1695, 1837, 1965, 2124
RsaNI	GTAC	7 cut(s)	301, 1328, 1481, 1694, 1836, 1964, 2123
SacI	GAGCTC	3 cut(s)	438, 537, 1953
SalI	GTCGAC	1 cut(s)	1400
Sau96I	GGNCC	7 cut(s)	243, 244, 385, 461, 943, 1270, 1907
ScaI	AGTACT	2 cut(s)	1965, 2124
SchI	GAGTC	3 cut(s)	328, 614, 867
ScrFI	CCNGG	4 cut(s)	248, 735, 1134, 2063
SduI	GDGCHC	4 cut(s)	247, 438, 537, 1953
SfaNI	GCATC	7 cut(s)	95, 541, 562, 600, 1492, 1579, 1720
SfcI	CTRYAG	2 cut(s)	55, 1985
SinI	GGWCC	4 cut(s)	385, 461, 943, 1907
SmlI	CTYRAG	2 cut(s)	692, 1100
SmoI	CTYRAG	2 cut(s)	692, 1100
SseBI	AGGCCT	2 cut(s)	488, 502
SsiI	CCGC	7 cut(s)	136, 204, 207, 233, 429, 656, 2082
SspI	AATATT	1 cut(s)	1758
SspMI	CTAG	6 cut(s)	663, 782, 1212, 1289, 1484, 1493
SstI	GAGCTC	3 cut(s)	438, 537, 1953
StuI	AGGCCT	2 cut(s)	488, 502
StyD4I	CCNGG	4 cut(s)	246, 733, 1132, 2061
TaaI	ACNGT	7 cut(s)	1080, 1372, 1406, 1480, 1989, 2109, 2143
TaiI	ACGT	7 cut(s)	256, 470, 733, 813, 1317, 1841, 2098
TaqI	TCGA	5 cut(s)	214, 405, 594, 1401, 2128
TaqII	GACCGA	1 cut(s)	1217
TatI	WGTACW	3 cut(s)	1480, 1963, 2122
TauI	GCSGC	3 cut(s)	207, 431, 659
TfiI	GAWTC	1 cut(s)	1635
TscAI	CASTG	5 cut(s)	826, 1075, 1085, 1401, 1822
TseFI	GTSAC	4 cut(s)	1274, 1299, 1470, 1813
TseI	GCWGC	9 cut(s)	257, 659, 1025, 1083, 1529, 1880, 2020, 2102, 2113
Tsp45I	GTSAC	4 cut(s)	1274, 1299, 1470, 1813
TspDTI	ATGAA	7 cut(s)	233, 351, 781, 858, 1106, 1275, 1524
TspGWI	ACGGA	2 cut(s)	1580, 2071
TspRI	CASTG	5 cut(s)	826, 1075, 1085, 1401, 1822
Vha464I	CTTAAG	1 cut(s)	692
VpaK11BI	GGWCC	4 cut(s)	385, 461, 943, 1907
XapI	RAATTY	3 cut(s)	342, 845, 1999
XbaI	TCTAGA	1 cut(s)	1288
XcmI	CCANNNNNNNNNTGG	1 cut(s)	954
XmiI	GTMKAC	3 cut(s)	678, 1311, 1401
XspI	CTAG	6 cut(s)	663, 782, 1212, 1289, 1484, 1493
ZraI	GACGTC	1 cut(s)	811
ZrmI	AGTACT	2 cut(s)	1965, 2124
Zsp2I	ATGCAT	1 cut(s)	638

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.