Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0009439

Physical Location & Seq

Genomic Coordinates Reverse (-)

33778021 .. 33782391

Gene Structure 4371 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00241510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGGAGGCGTCGCCGTCGCCGTTCTTCAGCCGTTCACGCTGTGCCGGCCGTGCGGCGGTTGGACTCCGACGACGAGGCCGAGGAGCTGTGCTGTTAAGAGCGGGAGGAACGGCATCAGAGTGAGGGTGAAGCCAGCGAGGGCAGCTCTAGTGGAGGCGAGACCGACGGCGATAAGAGTTAGAGACGATGACGTCGTCGACGGAGGTGATAGGTCGGTGAAGGTGCAGATCTATCGAGGCGGCGCCGTTGATCGTGCGGACGATATTCAGGCGGAGGCAAGGGCCTTGGCACGTGCCGCAAATGCCTCCGTTTACAGCCCCGAGTTTCTGGTCGTCAAGTACGGCTCTAGCCCGGTCAAGGTGATTCGGAGGACTCTGAAGATTTTGACAGGGCTAGGTTCGTTTGGGTTCAAGTTGCTTATCGATCAAAGGAAAGGCGTGATCGATCAGAATAAAAGACGGCGAGCTGTGGAGCTCAGGCAAATTTTCACTCGTTTGGGACCGACTTTTGTCAAATTAGGTCAGGGCTTGTCAACAAGGCCTGACGTCTGTCCGACGGAGTATCTGGAGGAGCTCTCTGAGCTTCAGGATGCTTTGCCGACATTTCCGAATGCAGAAGCATTTGCGTGCATTGAGAGGGAGCTGGGAGTACCGCTTGACTCGATTTACTCGTGCATATCTCCAAATCCAATTGCAGCAGCTAGTTTAGGTCAAGTCTACAAAGCTAAACTCAAGTCTTCTGGGCAGGTGGTTGCTGTTAAGGTGCAACGCCCTGGCATTGAAGAAGCTATAGGACTAGACTTCTATCTCATCAGAAATCTAGGATTCTTCATAAATAAATATGTTGACGTGGTAACTACGGATGTTGTGGCCCTTATTGATGAATTTGCACGCAGAGTTTATCAAGAGCTCAACTATGTGCAGGAGGGACAAAATGCGAGGAGATTTAAGAAATTGTATGCTGACAAGAAAGATGTTCTTGTCCCAGACATTTTCTGGGATTATACCAGCAGCAAAGTGTTGACAATGGAGTGGGTAAATGGAGTCAAATTAAATGAGCAAGCTGCCATTGAGGGTCAAGGGTTGAAAGTATTGGATCTGGTGAACACTGGCATACAATGCAGCCTCAGACAGCTACTTGAGTATGGATATTTTCATGCAGATCCTCATCCTGGGAATCTCTTGGCAACGCCTGAAGGAAAGCTTGCCTTTCTTGATTTTGGAATGATGAGTGAGACACCAGAAGAAGCTAGATATGCTATAATCGGTCATGTTGTTCACATGGTTAATCGGGATTATGAAGCTATGGCTAATGATTACTATGCTCTAGATTTCTTATCGCCTGATGTAGATGTTTCTCCAATTGTACCAGCACTCCGGGACTTCTTTGATGATGCACTTAATTCTACTGTTAGTGAACTTAATTTTAAAACACTGGTGGATGGTCTAGGTGCTGTGTTGTATCAATATCCATTCAATGTCCCAGCTTATTATGCATTGATATTAAGGTCACTCACTGTACTAGAAGGTTTAGCCCTTTATGCTGATCCTAATTTCAAGGTGCTGGCTGCTTCATACCCATATTTTGCTAAAAGGCTTCTGACAGATCCAAATCCATATCTCAGAGATGCTCTGATTGAGTTGCTTTTCAAGGATGGAAAGTGGAACCGACTAGAAAGCTTGCTGGATCAAGGAAGCAAGGATAGAGATTTCTCTGCAAAAGATGCTTTACAGCCTGTGTTGAAGTTATTATTGGGTCCAGATGGTGAAGAACTTCGGACTTTAGTTGTAAAGGAGGCTGTGCGTGTCACTGAAGCTTTCATTTGGGGCACAGCTATTGACACATACAATATTATACCCGATTTTGTGAAGGGTTTGATAGTTAATGGCAATGCTACTGGACCACTCGCAATGAGCATTGCTGAACAAGAAAGCATGATAGCACTCCGAGATCAAGTAATCAGGATTTGGGGACTTCTAAGGACCTCTGAGAGTTTTGATCCTGCCATTTTGCAGCCCATTTTACAAGATGAGAATGTCTTAGTAGTTAGTACCATGTCTTGGTGCAAGGTCCTTCAACAACCTGAAGCGCGCAACCTAGGGGGAAAAGTTATTGGTGGGATCACACAGCGACTTGCAGCACGGTTGCTGCAACAAGTTCTTCGAGTGCCACCAACAGTTCCTGCTTCGAATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0006995 GO:0006996 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009639 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009987 GO:0009991 GO:0010035 GO:0010114 GO:0010287 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0031279 GO:0031647 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0036211 GO:0042221 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043562 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0050821 GO:0050896 GO:0051716 GO:0051726 GO:0065007 GO:0065008 GO:0065009 GO:0071496 GO:0071704 GO:0071840 GO:0080177 GO:0080183 GO:0097472 GO:0140096 GO:1901564 GO:1901700 GO:1902171

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1

Protein Analysis

732

Amino Acids

81.09

Weight (kDa)

6.55

Isoelectric Point (pI)

40.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	195 - 438	1.9e-75	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79600
fragaria_vesca	FvH4_5g27020 FvH4_5g27020 FvH4_5g27020 FvH4_5g27020 FvH4_5g27020 FvH4_5g27020
malus_domestica	MD00G1146800.v1.1
prunus_persica	Prupe.5G000100_v2.0.a1
pyrus_communis	pycom06g00090
rosa_chinensis	RchiOBHm_Chr7g0217991
rosa_laevigata	RLG00000002426
rosa_multiflora	Rmu_sc0000870.1_g000077 Rmu_sc0008242.1_g000006
rosa_roxburghii	Rroxscaffold_3G00241510
rosa_rugosa	Rorug07G0173000
rosa_samantha	Rh7AG315100 Rh7BG305500 Rh7CG332500 Rh7DG313500
rosa_wichuraiana	Rw7G026630 Rw7G026710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	736
AasI	GACNNNNNNGTC	1 cut(s)	191
AatII	GACGTC	2 cut(s)	195, 549
Acc36I	ACCTGC	1 cut(s)	736
AccB1I	GGYRCC	1 cut(s)	242
AccB7I	CCANNNNNTGG	1 cut(s)	2061
AccBSI	CCGCTC	1 cut(s)	102
AccI	GTMKAC	2 cut(s)	198, 717
AccII	CGCG	1 cut(s)	2092
AciI	CCGC	8 cut(s)	54, 57, 102, 240, 257, 272, 297, 653
AclWI	GGATC	7 cut(s)	1104, 1157, 1541, 1601, 1695, 1994, 2129
AcoI	YGGCCR	1 cut(s)	47
AcsI	RAATTY	3 cut(s)	483, 884, 2191
AcuI	CTGAAG	6 cut(s)	11, 398, 569, 1215, 1833, 2106
AcvI	CACGTG	1 cut(s)	293
AcyI	GRCGYC	4 cut(s)	9, 192, 243, 546
AdeI	CACNNNGTG	1 cut(s)	42
AfaI	GTAC	5 cut(s)	341, 651, 1368, 1521, 2053
AfiI	CCNNNNNNNGG	4 cut(s)	56, 358, 1172, 2061
AgsI	TTSAA	8 cut(s)	412, 782, 1087, 1477, 1558, 1651, 1744, 2078
AjiI	CACGTC	1 cut(s)	850
AjnI	CCWGG	2 cut(s)	772, 1171
AjuI	GAANNNNNNNTTGG	2 cut(s)	1736, 1768
Alw21I	GWGCWC	3 cut(s)	477, 576, 912
Alw26I	GTCTC	3 cut(s)	154, 177, 1229
AlwI	GGATC	7 cut(s)	1104, 1157, 1541, 1601, 1695, 1994, 2129
AlwNI	CAGNNNCTG	1 cut(s)	2183
Ama87I	CYCGRG	1 cut(s)	320
AoxI	GGCC	5 cut(s)	47, 77, 282, 539, 870
ApoI	RAATTY	3 cut(s)	483, 884, 2191
Asp700I	GAANNNNTTC	1 cut(s)	1773
AspA2I	CCTAGG	1 cut(s)	2098
AspLEI	GCGC	3 cut(s)	245, 2092, 2094
AspS9I	GGNCC	7 cut(s)	282, 500, 871, 1757, 1901, 1983, 2071
AsuC2I	CCSGG	2 cut(s)	353, 1379
AsuHPI	GGTGA	6 cut(s)	139, 218, 229, 373, 1114, 1778
AsuII	TTCGAA	1 cut(s)	2189
AvaI	CYCGRG	1 cut(s)	320
AvaII	GGWCC	5 cut(s)	500, 1757, 1901, 1983, 2071
AvrII	CCTAGG	1 cut(s)	2098
BaeGI	GKGCMC	1 cut(s)	1832
BanI	GGYRCC	1 cut(s)	242
BanII	GRGCYC	3 cut(s)	477, 576, 912
BauI	CACGAG	1 cut(s)	670
BbrPI	CACGTG	1 cut(s)	293
BbsI	GAAGAC	1 cut(s)	729
Bbv12I	GWGCWC	3 cut(s)	477, 576, 912
BccI	CCATC	3 cut(s)	1436, 1649, 1757
BceAI	ACGGC	8 cut(s)	5, 16, 34, 127, 183, 230, 358, 476
BcgI	CGANNNNNNTGC	2 cut(s)	215, 249
BciT130I	CCWGG	2 cut(s)	774, 1173
BcnI	CCSGG	2 cut(s)	353, 1379
BcoDI	GTCTC	3 cut(s)	154, 177, 1229
BfmI	CTRYAG	1 cut(s)	789
BfoI	RGCGCY	1 cut(s)	246
BfuAI	ACCTGC	1 cut(s)	736
BglII	AGATCT	1 cut(s)	228
BlnI	CCTAGG	1 cut(s)	2098
Bme1390I	CCNGG	4 cut(s)	353, 774, 1173, 1379
Bme18I	GGWCC	5 cut(s)	500, 1757, 1901, 1983, 2071
BmeT110I	CYCGRG	1 cut(s)	320
BmgBI	CACGTC	1 cut(s)	850
BmgT120I	GGNCC	7 cut(s)	282, 500, 871, 1757, 1901, 1983, 2071
BmiI	GGNNCC	4 cut(s)	244, 501, 1667, 1758
BmrFI	CCNGG	4 cut(s)	353, 774, 1173, 1379
BmsI	GCATC	5 cut(s)	123, 580, 1384, 1618, 1714
BoxI	GACNNNNGTC	2 cut(s)	509, 549
BpiI	GAAGAC	1 cut(s)	729
BplI	GAGNNNNNCTC	4 cut(s)	130, 162, 560, 592
BpmI	CTGGAG	1 cut(s)	587
Bpu10I	CCTNAGC	1 cut(s)	476
Bpu14I	TTCGAA	1 cut(s)	2189
BpuEI	CTTGAG	2 cut(s)	716, 1160
BpuMI	CCSGG	2 cut(s)	353, 1379
Bsa29I	ATCGAT	2 cut(s)	423, 444
BsaAI	YACGTR	1 cut(s)	293
BsaBI	GATNNNNATC	2 cut(s)	1167, 1611
BsaHI	GRCGYC	4 cut(s)	9, 192, 243, 546
BsaI	GGTCTC	1 cut(s)	154
BsaJI	CCNNGG	5 cut(s)	80, 285, 772, 1172, 2098
BsaXI	ACNNNNNCTCC	2 cut(s)	1359, 1389
Bsc4I	CCNNNNNNNGG	4 cut(s)	56, 358, 1172, 2061
Bse118I	RCCGGY	1 cut(s)	45
Bse1I	ACTGG	3 cut(s)	1114, 1440, 1903
Bse3DI	GCAATG	3 cut(s)	1897, 1917, 1917
Bse8I	GATNNNNATC	2 cut(s)	1167, 1611
BseBI	CCWGG	2 cut(s)	774, 1173
BseCI	ATCGAT	2 cut(s)	423, 444
BseDI	CCNNGG	5 cut(s)	80, 285, 772, 1172, 2098
BseGI	GGATG	5 cut(s)	595, 868, 1168, 1447, 1660
BseJI	GATNNNNATC	2 cut(s)	1167, 1611
BseLI	CCNNNNNNNGG	4 cut(s)	56, 358, 1172, 2061
BseMI	GCAATG	3 cut(s)	1897, 1917, 1917
BseMII	CTCAG	5 cut(s)	490, 570, 1141, 1636, 1980
BseNI	ACTGG	3 cut(s)	1114, 1440, 1903
BsePI	GCGCGC	1 cut(s)	2090
BseRI	GAGGAG	3 cut(s)	97, 584, 955
BseSI	GKGCMC	1 cut(s)	1832
BseX3I	CGGCCG	1 cut(s)	47
BseYI	CCCAGC	2 cut(s)	643, 1483
BsgI	GTGCAG	2 cut(s)	245, 941
Bsh1236I	CGCG	1 cut(s)	2092
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	5 cut(s)	49, 79, 284, 541, 872
BshNI	GGYRCC	1 cut(s)	242
BshVI	ATCGAT	2 cut(s)	423, 444
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	3 cut(s)	477, 576, 912
BsiHKCI	CYCGRG	1 cut(s)	320
BsiSI	CCGG	3 cut(s)	46, 353, 1378
BslFI	GGGAC	6 cut(s)	513, 942, 968, 1394, 1466, 1986
BslI	CCNNNNNNNGG	4 cut(s)	56, 358, 1172, 2061
BsmAI	GTCTC	3 cut(s)	154, 177, 1229
BsmBI	CGTCTC	1 cut(s)	177
BsmFI	GGGAC	6 cut(s)	513, 942, 968, 1394, 1466, 1986
BsmI	GAATGC	1 cut(s)	616
BsnI	GGCC	5 cut(s)	49, 79, 284, 541, 872
Bso31I	GGTCTC	1 cut(s)	154
BsoBI	CYCGRG	1 cut(s)	320
Bsp119I	TTCGAA	1 cut(s)	2189
Bsp1286I	GDGCHC	4 cut(s)	477, 576, 912, 1832
BspACI	CCGC	8 cut(s)	54, 57, 102, 240, 257, 272, 297, 653
BspANI	GGCC	5 cut(s)	49, 79, 284, 541, 872
BspCNI	CTCAG	5 cut(s)	489, 571, 1140, 1635, 1981
BspDI	ATCGAT	2 cut(s)	423, 444
BspFNI	CGCG	1 cut(s)	2092
BspLI	GGNNCC	4 cut(s)	244, 501, 1667, 1758
BspMI	ACCTGC	1 cut(s)	736
BspPI	GGATC	7 cut(s)	1104, 1157, 1541, 1601, 1695, 1994, 2129
BspT104I	TTCGAA	1 cut(s)	2189
BspT107I	GGYRCC	1 cut(s)	242
BspTNI	GGTCTC	1 cut(s)	154
BsrBI	CCGCTC	1 cut(s)	102
BsrDI	GCAATG	3 cut(s)	1897, 1917, 1917
BsrFI	RCCGGY	1 cut(s)	45
BsrI	ACTGG	3 cut(s)	1114, 1440, 1903
BssAI	RCCGGY	1 cut(s)	45
BssECI	CCNNGG	5 cut(s)	80, 285, 772, 1172, 2098
BssHII	GCGCGC	1 cut(s)	2090
BssNI	GRCGYC	4 cut(s)	9, 192, 243, 546
BssSI	CACGAG	1 cut(s)	670
BssT1I	CCWWGG	2 cut(s)	285, 2098
Bst2BI	CACGAG	1 cut(s)	670
Bst2UI	CCWGG	2 cut(s)	774, 1173
Bst4CI	ACNGT	4 cut(s)	1411, 1519, 2145, 2179
BstACI	GRCGYC	4 cut(s)	9, 192, 243, 546
BstAPI	GCANNNNNTGC	2 cut(s)	1119, 1724
BstBAI	YACGTR	1 cut(s)	293
BstBI	TTCGAA	1 cut(s)	2189
BstDEI	CTNAG	7 cut(s)	476, 579, 1127, 1622, 1979, 1989, 2041
BstF5I	GGATG	5 cut(s)	595, 868, 1168, 1447, 1660
BstFNI	CGCG	1 cut(s)	2092
BstH2I	RGCGCY	1 cut(s)	246
BstHHI	GCGC	3 cut(s)	245, 2092, 2094
BstMAI	GTCTC	3 cut(s)	154, 177, 1229
BstMCI	CGRYCG	1 cut(s)	50
BstNI	CCWGG	2 cut(s)	774, 1173
BstPAI	GACNNNNGTC	2 cut(s)	509, 549
BstSCI	CCNGG	4 cut(s)	351, 772, 1171, 1377
BstSFI	CTRYAG	1 cut(s)	789
BstSLI	GKGCMC	1 cut(s)	1832
BstUI	CGCG	1 cut(s)	2092
BstV2I	GAAGAC	1 cut(s)	729
BstX2I	RGATCY	4 cut(s)	228, 1096, 1162, 1606
BstYI	RGATCY	4 cut(s)	228, 1096, 1162, 1606
BstZI	CGGCCG	1 cut(s)	47
Bsu15I	ATCGAT	2 cut(s)	423, 444
BsuRI	GGCC	5 cut(s)	49, 79, 284, 541, 872
BsuTUI	ATCGAT	2 cut(s)	423, 444
BtrI	CACGTC	1 cut(s)	850
BtsCI	GGATG	5 cut(s)	595, 868, 1168, 1447, 1660
BtsIMutI	CAGTG	4 cut(s)	1107, 1433, 1515, 1809
BveI	ACCTGC	1 cut(s)	736
CaiI	CAGNNNCTG	1 cut(s)	2183
CfoI	GCGC	3 cut(s)	245, 2092, 2094
Cfr10I	RCCGGY	1 cut(s)	45
Cfr13I	GGNCC	7 cut(s)	282, 500, 871, 1757, 1901, 1983, 2071
ClaI	ATCGAT	2 cut(s)	423, 444
Csp6I	GTAC	5 cut(s)	340, 650, 1367, 1520, 2052
CviAII	CATG	5 cut(s)	1157, 1271, 1282, 1936, 2056
CviQI	GTAC	5 cut(s)	340, 650, 1367, 1520, 2052
DdeI	CTNAG	7 cut(s)	476, 579, 1127, 1622, 1979, 1989, 2041
DinI	GGCGCC	1 cut(s)	244
DraI	TTTAAA	1 cut(s)	1429
DraIII	CACNNNGTG	1 cut(s)	42
DrdI	GACNNNNNNGTC	1 cut(s)	191
DseDI	GACNNNNNNGTC	1 cut(s)	191
EaeI	YGGCCR	1 cut(s)	47
EagI	CGGCCG	1 cut(s)	47
EciI	GGCGGA	1 cut(s)	287
Ecl136II	GAGCTC	3 cut(s)	475, 574, 910
EclXI	CGGCCG	1 cut(s)	47
Eco130I	CCWWGG	2 cut(s)	285, 2098
Eco147I	AGGCCT	1 cut(s)	541
Eco24I	GRGCYC	3 cut(s)	477, 576, 912
Eco31I	GGTCTC	1 cut(s)	154
Eco47I	GGWCC	5 cut(s)	500, 1757, 1901, 1983, 2071
Eco52I	CGGCCG	1 cut(s)	47
Eco53kI	GAGCTC	3 cut(s)	475, 574, 910
Eco57I	CTGAAG	6 cut(s)	11, 398, 569, 1215, 1833, 2106
Eco72I	CACGTG	1 cut(s)	293
Eco88I	CYCGRG	1 cut(s)	320
EcoICRI	GAGCTC	3 cut(s)	475, 574, 910
EcoO109I	RGGNCCY	3 cut(s)	282, 1983, 2071
EcoRII	CCWGG	2 cut(s)	772, 1171
EcoT14I	CCWWGG	2 cut(s)	285, 2098
EcoT22I	ATGCAT	1 cut(s)	1498
EcoT38I	GRGCYC	3 cut(s)	477, 576, 912
EgeI	GGCGCC	1 cut(s)	244
EheI	GGCGCC	1 cut(s)	244
ErhI	CCWWGG	2 cut(s)	285, 2098
Esp3I	CGTCTC	1 cut(s)	177
FaeI	CATG	5 cut(s)	1160, 1274, 1285, 1939, 2059
FalI	AAGNNNNNCTT	6 cut(s)	963, 995, 1188, 1220, 1193, 1225
FaqI	GGGAC	6 cut(s)	513, 942, 968, 1394, 1466, 1986
FatI	CATG	5 cut(s)	1156, 1270, 1281, 1935, 2055
FauI	CCCGC	1 cut(s)	95
FblI	GTMKAC	2 cut(s)	198, 717
FokI	GGATG	5 cut(s)	602, 875, 1155, 1454, 1667
FriOI	GRGCYC	3 cut(s)	477, 576, 912
GlaI	GCGC	3 cut(s)	244, 2091, 2093
GsaI	CCCAGC	2 cut(s)	647, 1487
GsuI	CTGGAG	1 cut(s)	587
HaeII	RGCGCY	1 cut(s)	246
HaeIII	GGCC	5 cut(s)	49, 79, 284, 541, 872
HapII	CCGG	3 cut(s)	46, 353, 1378
HhaI	GCGC	3 cut(s)	245, 2092, 2094
Hin1I	GRCGYC	4 cut(s)	9, 192, 243, 546
Hin1II	CATG	5 cut(s)	1160, 1274, 1285, 1939, 2059
Hin6I	GCGC	3 cut(s)	243, 2090, 2092
HinP1I	GCGC	3 cut(s)	243, 2090, 2092
HincII	GTYRAC	4 cut(s)	199, 534, 847, 1023
HindII	GTYRAC	4 cut(s)	199, 534, 847, 1023
HindIII	AAGCTT	3 cut(s)	1202, 1678, 1815
HinfI	GANTC	7 cut(s)	64, 364, 373, 659, 825, 1044, 1177
HpaII	CCGG	3 cut(s)	46, 353, 1378
HphI	GGTGA	6 cut(s)	139, 218, 229, 373, 1114, 1778
Hpy188III	TCNNGA	8 cut(s)	566, 587, 905, 1214, 1292, 1328, 1760, 1963
Hpy99I	CGWCG	9 cut(s)	14, 20, 73, 76, 169, 197, 200, 203, 559
HpyAV	CCTTC	5 cut(s)	214, 1190, 1520, 1864, 2084
HpyCH4III	ACNGT	4 cut(s)	1411, 1519, 2145, 2179
HpyCH4IV	ACGT	4 cut(s)	192, 292, 546, 849
HpyF3I	CTNAG	7 cut(s)	476, 579, 1127, 1622, 1979, 1989, 2041
HpySE526I	ACGT	4 cut(s)	192, 292, 546, 849
Hsp92I	GRCGYC	4 cut(s)	9, 192, 243, 546
Hsp92II	CATG	5 cut(s)	1160, 1274, 1285, 1939, 2059
HspAI	GCGC	3 cut(s)	243, 2090, 2092
KasI	GGCGCC	1 cut(s)	242
KroI	GCCGGC	1 cut(s)	45
KroNI	GCCGGC	1 cut(s)	47
LmnI	GCTCC	4 cut(s)	84, 472, 571, 640
LweI	GCATC	5 cut(s)	123, 580, 1384, 1618, 1714
MaeII	ACGT	4 cut(s)	192, 292, 546, 849
MaeIII	GTNAC	3 cut(s)	853, 1509, 1807
MbiI	CCGCTC	1 cut(s)	102
MboII	GAAGA	8 cut(s)	17, 391, 729, 794, 820, 1256, 1781, 2153
MfeI	CAATTG	2 cut(s)	690, 1362
MflI	RGATCY	4 cut(s)	228, 1096, 1162, 1606
MhlI	GDGCHC	4 cut(s)	477, 576, 912, 1832
Mly113I	GGCGCC	1 cut(s)	243
MlyI	GAGTC	4 cut(s)	58, 367, 653, 1053
MmeI	TCCRAC	3 cut(s)	41, 92, 578
Mph1103I	ATGCAT	1 cut(s)	1498
MroNI	GCCGGC	1 cut(s)	45
MroXI	GAANNNNTTC	1 cut(s)	1773
MslI	CAYNNNNRTG	2 cut(s)	119, 625
MspI	CCGG	3 cut(s)	46, 353, 1378
MspR9I	CCNGG	4 cut(s)	353, 774, 1173, 1379
MunI	CAATTG	2 cut(s)	690, 1362
Mva1269I	GAATGC	1 cut(s)	616
MvaI	CCWGG	2 cut(s)	774, 1173
MvnI	CGCG	1 cut(s)	2092
NaeI	GCCGGC	1 cut(s)	47
NarI	GGCGCC	1 cut(s)	243
NciI	CCSGG	2 cut(s)	353, 1379
NgoMIV	GCCGGC	1 cut(s)	45
NlaIII	CATG	5 cut(s)	1160, 1274, 1285, 1939, 2059
NlaIV	GGNNCC	4 cut(s)	244, 501, 1667, 1758
NmeAIII	GCCGAG	1 cut(s)	105
NmuCI	GTSAC	2 cut(s)	1509, 1807
NsiI	ATGCAT	1 cut(s)	1498
NspV	TTCGAA	1 cut(s)	2189
PaqCI	CACCTGC	1 cut(s)	736
PauI	GCGCGC	1 cut(s)	2090
PceI	AGGCCT	1 cut(s)	541
PcsI	WCGNNNNNNNCGW	4 cut(s)	18, 77, 192, 668
PctI	GAATGC	1 cut(s)	616
PdiI	GCCGGC	1 cut(s)	47
PdmI	GAANNNNTTC	1 cut(s)	1773
PfeI	GAWTC	3 cut(s)	364, 825, 1177
PflFI	GACNNNGTC	1 cut(s)	194
PflMI	CCANNNNNTGG	1 cut(s)	2061
PfoI	TCCNGGA	1 cut(s)	1377
PleI	GAGTC	4 cut(s)	58, 367, 653, 1052
PluTI	GGCGCC	1 cut(s)	246
PmaCI	CACGTG	1 cut(s)	293
PmlI	CACGTG	1 cut(s)	293
PpsI	GAGTC	4 cut(s)	58, 367, 653, 1052
Ppu21I	YACGTR	1 cut(s)	293
PpuMI	RGGWCCY	2 cut(s)	1983, 2071
PshAI	GACNNNNGTC	2 cut(s)	509, 549
Psp124BI	GAGCTC	3 cut(s)	477, 576, 912
Psp5II	RGGWCCY	2 cut(s)	1983, 2071
Psp6I	CCWGG	2 cut(s)	772, 1171
PspCI	CACGTG	1 cut(s)	293
PspFI	CCCAGC	2 cut(s)	643, 1483
PspGI	CCWGG	2 cut(s)	772, 1171
PspN4I	GGNNCC	4 cut(s)	244, 501, 1667, 1758
PspPI	GGNCC	7 cut(s)	282, 500, 871, 1757, 1901, 1983, 2071
PspPPI	RGGWCCY	2 cut(s)	1983, 2071
PstNI	CAGNNNCTG	1 cut(s)	2183
PsuI	RGATCY	4 cut(s)	228, 1096, 1162, 1606
PsyI	GACNNNGTC	1 cut(s)	194
PteI	GCGCGC	1 cut(s)	2090
RsaI	GTAC	5 cut(s)	341, 651, 1368, 1521, 2053
RsaNI	GTAC	5 cut(s)	340, 650, 1367, 1520, 2052
RseI	CAYNNNNRTG	2 cut(s)	119, 625
SacI	GAGCTC	3 cut(s)	477, 576, 912
SalI	GTCGAC	1 cut(s)	197
Sau96I	GGNCC	7 cut(s)	282, 500, 871, 1757, 1901, 1983, 2071
SchI	GAGTC	4 cut(s)	58, 367, 653, 1053
ScrFI	CCNGG	4 cut(s)	353, 774, 1173, 1379
SduI	GDGCHC	4 cut(s)	477, 576, 912, 1832
SfaNI	GCATC	5 cut(s)	123, 580, 1384, 1618, 1714
SfcI	CTRYAG	1 cut(s)	789
SfoI	GGCGCC	1 cut(s)	244
SfuI	TTCGAA	1 cut(s)	2189
SgrDI	CGTCGACG	1 cut(s)	197
SinI	GGWCC	5 cut(s)	500, 1757, 1901, 1983, 2071
SmiMI	CAYNNNNRTG	2 cut(s)	119, 625
SmlI	CTYRAG	2 cut(s)	731, 1139
SmoI	CTYRAG	2 cut(s)	731, 1139
SseBI	AGGCCT	1 cut(s)	541
SsiI	CCGC	8 cut(s)	54, 57, 102, 240, 257, 272, 297, 653
SspDI	GGCGCC	1 cut(s)	242
SspI	AATATT	1 cut(s)	1852
SstI	GAGCTC	3 cut(s)	477, 576, 912
StuI	AGGCCT	1 cut(s)	541
StyD4I	CCNGG	4 cut(s)	351, 772, 1171, 1377
StyI	CCWWGG	2 cut(s)	285, 2098
TaaI	ACNGT	4 cut(s)	1411, 1519, 2145, 2179
TaiI	ACGT	4 cut(s)	195, 295, 549, 852
TaqI	TCGA	7 cut(s)	198, 235, 423, 444, 662, 2164, 2189
TaqII	GACCGA	3 cut(s)	178, 517, 1256
TatI	WGTACW	1 cut(s)	1519
TauI	GCSGC	3 cut(s)	57, 243, 299
TfiI	GAWTC	3 cut(s)	364, 825, 1177
TscAI	CASTG	4 cut(s)	1114, 1440, 1522, 1816
TseFI	GTSAC	2 cut(s)	1509, 1807
Tsp45I	GTSAC	2 cut(s)	1509, 1807
TspDTI	ATGAA	6 cut(s)	820, 897, 1145, 1314, 1563, 1810
TspGWI	ACGGA	4 cut(s)	216, 298, 572, 875
TspRI	CASTG	4 cut(s)	1114, 1440, 1522, 1816
Tth111I	GACNNNGTC	1 cut(s)	194
Van91I	CCANNNNNTGG	1 cut(s)	2061
VpaK11BI	GGWCC	5 cut(s)	500, 1757, 1901, 1983, 2071
XapI	RAATTY	3 cut(s)	483, 884, 2191
XbaI	TCTAGA	1 cut(s)	1327
XcmI	CCANNNNNNNNNTGG	1 cut(s)	993
XmaJI	CCTAGG	1 cut(s)	2098
XmiI	GTMKAC	2 cut(s)	198, 717
XmnI	GAANNNNTTC	1 cut(s)	1773
ZraI	GACGTC	2 cut(s)	193, 547
Zsp2I	ATGCAT	1 cut(s)	1498

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.