Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0009439

Physical Location & Seq

Genomic Coordinates Reverse (-)

34056493 .. 34060347

Gene Structure 3855 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002426

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGGAGGCGTCGCCGTCGCCGTTCTTCAGCCGTTCACGCTGTGCCGGCCGCGCGGCGGTTGGACTCCGACGACGAGGCCGAGGAGTTGTGCTGTTAAGAGCAGGAGGAACGGCCTCAGAGTGAGGGCAGCTCTAGTGGAGGCGAGACCGACGGCGATAAGAGTTCGAGACGATGACGTCGTCGACGGAGGTGATAGGTCGGTGAAGGTGCAGATCTATCGAGGAGGCGCCGTTGATCGTGCGGACGATATTCAGGCCGAGGCAAGGGCCTTGGCACGTGCTGCAAATGCTTCCGTTTACAGCCCCGAGTTTCTGGTCGTCAAGTACGGCTCTAGCCCGGTCAAGGTGATTCGGAGGACTCTGAAAATTTTGACAGCGCTAGGCACGTTTGGGGTGAATTTGCTTATCGATCAAAGGAGAGGCGTGATCAATCAGAATAAAAGACGGCGAGCTGTGGAGCTCAGGCAAATTTTCACTCGTTTGGGTCCTACTTTTGTGAAATTAGGTCAGGGCTTGTCAACAAGGCCTGACGTCTGTCCGACGGAGTATCTGGAGGAGCTCTCTGAGCTTCAGGATGCTTTGCCGACATTTCCGAATGCAGAAGCATTTGCGTGCATTGAGAAGGAGTTGGGAGTACCACTTGACTCGATTTACTCGTGCATATCTCCATCTCCAATTGCAGCAGCTAGTTTAGGTCAAGTCTACAAAGCTAAACTCAAGTCTTCTGGACAGGTGGTTGCTGTTAAGGTGCAACGCCCTGGCATTGAAGAAGCTATAGGACTAGACTTCTATCTCATCAGAAATCTAGGATTTGTCGTAAATAAATATGTTGATGTGGTAACTACGGATGTTGTGGCCCTTATTGATGAATTTGCACGCAGAGTTTATCAAGAGCTCAACTATGTGCAGGAGGGACAAAATGCGAGGAGATTTAAGAAATTGTATGCTGACAAGAAAGATGTTCTTGTCCCAGACATTTTCTGGGATTATACCAGCGGCAAAGTGTTGACAATGGAGTGGGTAAATGGAGTCAAATTAAATGAGCAAGCTGCCATTGAGGGTCAAGGGTTGAAAGTATTGGATCTGGTGAACACTGGCATACAGTGCAGCCTCAGACAGCTACTTGAGTATGGATATTTTCATGCAGATCCTCATCCTGGGAATCTCTTGGCAACGCCTGAAGGAAAGCTTGCCTTTCTTGATTTTGGAATGATGAGTGAGACACCAGAAGAAGCTAGATATGCTATAATCGGTCATGTTGTTCACATGGTTAATCGGGATTATGAAGCTATGGCTAATGATTACTATGCTCTAGATTTCTTATCGCCTGATGTAGATGTTTCTCCAATTGTACCAGCTCTTCGGGACTTCTTTGATGATGCACTTAATTCTACTGTTAGTGAACTTAATTTTAAAACACTGGTGGATGGTCTAGGTGCTGTGTTGTATCAATATCCATTCAATGTCCCAGCTTATTATGCATTGATATTAAGGTCACTCACTGTACTAGAAGGTCTAGCCCTTTATGCTGATCCTAATTTCAAGGTGCTGGCTGCTTCATACCCATATTTTGCTAAAAGGCTTCTGACAGATCCAAATCCGTATCTCAGAGATGCTCTGATTGAGTTGCTTTTCAAGGATGGAAAGTTTAGGTGGAACCGACTAGAAAGCTTGCTGGTTCAAGGAAGCAAGGATAGAGATTTCTCTGCAAAAGATGCTTTACAGCCTGTGTTGAAGTTATTATTGGGTCCAGATGGTGAAGAACTTCGGACTTTAGTTGTAAAGGAGGCTGTGCGTGTTACTGAAGCTTTCATTTGGGGCACAGCTATTGACACATACAATATTATACCCGATTTTGTGAAGGGTTTGATAGTTAATGGCAATGCTACTGGACCACTCGCAATGAGCATTGCTGAACAAGAAAGCATGATAGCACTCCGAGATCAAGTAATCAGGATTTGGGGACTTCTAAGGACCTCTGAGAGTTTTGATCCTGCCATTTTGCAGCCCATCTTACAAGTCCTTCAACAACCTGAAGCGCGCAACCTAGGGGGGCAAGTTATTGGTGGGATCACACAGCGACTTGCAGCACGGTTGCTGCAACAAGTTCTTCGAGTGCCACCAACAGTTCCTGCTTCGAATTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004693 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0006995 GO:0006996 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009605 GO:0009628 GO:0009639 GO:0009642 GO:0009644 GO:0009657 GO:0009658 GO:0009987 GO:0009991 GO:0010035 GO:0010114 GO:0010287 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0031279 GO:0031647 GO:0031667 GO:0031668 GO:0031669 GO:0033554 GO:0036211 GO:0042221 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043562 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050790 GO:0050794 GO:0050821 GO:0050896 GO:0051716 GO:0051726 GO:0065007 GO:0065008 GO:0065009 GO:0071496 GO:0071704 GO:0071840 GO:0080177 GO:0080183 GO:0097472 GO:0140096 GO:1901564 GO:1901700 GO:1902171

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC1

Protein Analysis

716

Amino Acids

79.23

Weight (kDa)

7.52

Isoelectric Point (pI)

44.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC1	PF03109	190 - 433	1.5e-75	ABC1 atypical kinase-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009439)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79600
fragaria_vesca	FvH4_5g27020 FvH4_5g27020 FvH4_5g27020 FvH4_5g27020 FvH4_5g27020 FvH4_5g27020
malus_domestica	MD00G1146800.v1.1
prunus_persica	Prupe.5G000100_v2.0.a1
pyrus_communis	pycom06g00090
rosa_chinensis	RchiOBHm_Chr7g0217991
rosa_laevigata	RLG00000002426
rosa_multiflora	Rmu_sc0000870.1_g000077 Rmu_sc0008242.1_g000006
rosa_roxburghii	Rroxscaffold_3G00241510
rosa_rugosa	Rorug07G0173000
rosa_samantha	Rh7AG315100 Rh7BG305500 Rh7CG332500 Rh7DG313500
rosa_wichuraiana	Rw7G026630 Rw7G026710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	176
AatII	GACGTC	2 cut(s)	180, 534
AccB1I	GGYRCC	1 cut(s)	227
AccI	GTMKAC	2 cut(s)	183, 702
AccII	CGCG	3 cut(s)	52, 54, 2041
AciI	CCGC	5 cut(s)	50, 54, 57, 242, 996
AclWI	GGATC	6 cut(s)	1089, 1142, 1526, 1586, 1985, 2078
AcoI	YGGCCR	1 cut(s)	47
AcsI	RAATTY	5 cut(s)	366, 397, 468, 869, 2140
AcuI	CTGAAG	5 cut(s)	11, 554, 1200, 1824, 2055
AcvI	CACGTG	1 cut(s)	278
AcyI	GRCGYC	4 cut(s)	9, 177, 228, 531
AdeI	CACNNNGTG	1 cut(s)	42
AfaI	GTAC	4 cut(s)	326, 636, 1353, 1506
AfeI	AGCGCT	1 cut(s)	378
AfiI	CCNNNNNNNGG	4 cut(s)	56, 264, 343, 1157
AgsI	TTSAA	8 cut(s)	767, 1072, 1462, 1543, 1636, 1682, 1735, 2027
AjnI	CCWGG	2 cut(s)	757, 1156
AjuI	GAANNNNNNNTTGG	2 cut(s)	1727, 1759
Alw21I	GWGCWC	3 cut(s)	462, 561, 897
Alw26I	GTCTC	3 cut(s)	139, 162, 1214
AlwI	GGATC	6 cut(s)	1089, 1142, 1526, 1586, 1985, 2078
AlwNI	CAGNNNCTG	1 cut(s)	2132
Ama87I	CYCGRG	1 cut(s)	305
Aor51HI	AGCGCT	1 cut(s)	378
AoxI	GGCC	7 cut(s)	47, 77, 112, 255, 267, 524, 855
ApoI	RAATTY	5 cut(s)	366, 397, 468, 869, 2140
Asp700I	GAANNNNTTC	1 cut(s)	1764
AspA2I	CCTAGG	1 cut(s)	2047
AspLEI	GCGC	5 cut(s)	54, 230, 379, 2041, 2043
AspS9I	GGNCC	6 cut(s)	267, 485, 856, 1748, 1892, 1974
AsuC2I	CCSGG	1 cut(s)	338
AsuHPI	GGTGA	6 cut(s)	203, 214, 358, 406, 1099, 1769
AsuII	TTCGAA	1 cut(s)	2138
AvaI	CYCGRG	1 cut(s)	305
AvaII	GGWCC	4 cut(s)	485, 1748, 1892, 1974
AvrII	CCTAGG	1 cut(s)	2047
BaeGI	GKGCMC	1 cut(s)	1823
BanI	GGYRCC	1 cut(s)	227
BanII	GRGCYC	3 cut(s)	462, 561, 897
BarI	GAAGNNNNNNTAC	2 cut(s)	1344, 1376
BauI	CACGAG	1 cut(s)	655
BbrPI	CACGTG	1 cut(s)	278
BbsI	GAAGAC	1 cut(s)	714
Bbv12I	GWGCWC	3 cut(s)	462, 561, 897
BccI	CCATC	5 cut(s)	676, 1421, 1634, 1748, 2018
BceAI	ACGGC	7 cut(s)	5, 16, 127, 168, 215, 343, 461
BcgI	CGANNNNNNTGC	2 cut(s)	200, 234
BciT130I	CCWGG	2 cut(s)	759, 1158
BclI	TGATCA	1 cut(s)	426
BcnI	CCSGG	1 cut(s)	338
BcoDI	GTCTC	3 cut(s)	139, 162, 1214
BfmI	CTRYAG	1 cut(s)	774
BfoI	RGCGCY	2 cut(s)	231, 380
BglII	AGATCT	1 cut(s)	213
BlnI	CCTAGG	1 cut(s)	2047
Bme1390I	CCNGG	3 cut(s)	338, 759, 1158
Bme18I	GGWCC	4 cut(s)	485, 1748, 1892, 1974
BmeT110I	CYCGRG	1 cut(s)	305
BmgT120I	GGNCC	6 cut(s)	267, 485, 856, 1748, 1892, 1974
BmiI	GGNNCC	4 cut(s)	229, 486, 1658, 1749
BmrFI	CCNGG	3 cut(s)	338, 759, 1158
BmsI	GCATC	4 cut(s)	565, 1369, 1603, 1705
BoxI	GACNNNNGTC	1 cut(s)	534
BpiI	GAAGAC	1 cut(s)	714
BplI	GAGNNNNNCTC	4 cut(s)	115, 147, 545, 577
BpmI	CTGGAG	1 cut(s)	572
Bpu10I	CCTNAGC	1 cut(s)	461
Bpu14I	TTCGAA	1 cut(s)	2138
BpuEI	CTTGAG	2 cut(s)	701, 1145
BpuMI	CCSGG	1 cut(s)	338
Bsa29I	ATCGAT	1 cut(s)	408
BsaAI	YACGTR	1 cut(s)	278
BsaBI	GATNNNNATC	2 cut(s)	1152, 1596
BsaHI	GRCGYC	4 cut(s)	9, 177, 228, 531
BsaI	GGTCTC	1 cut(s)	139
BsaJI	CCNNGG	6 cut(s)	80, 258, 270, 757, 1157, 2047
BsaXI	ACNNNNNCTCC	2 cut(s)	216, 246
Bsc4I	CCNNNNNNNGG	4 cut(s)	56, 264, 343, 1157
Bse118I	RCCGGY	1 cut(s)	45
Bse1I	ACTGG	3 cut(s)	1099, 1425, 1894
Bse3DI	GCAATG	3 cut(s)	1888, 1908, 1908
Bse8I	GATNNNNATC	2 cut(s)	1152, 1596
BseBI	CCWGG	2 cut(s)	759, 1158
BseCI	ATCGAT	1 cut(s)	408
BseDI	CCNNGG	6 cut(s)	80, 258, 270, 757, 1157, 2047
BseGI	GGATG	5 cut(s)	580, 853, 1153, 1432, 1645
BseJI	GATNNNNATC	2 cut(s)	1152, 1596
BseLI	CCNNNNNNNGG	4 cut(s)	56, 264, 343, 1157
BseMI	GCAATG	3 cut(s)	1888, 1908, 1908
BseMII	CTCAG	6 cut(s)	130, 475, 555, 1126, 1621, 1971
BseNI	ACTGG	3 cut(s)	1099, 1425, 1894
BsePI	GCGCGC	1 cut(s)	2039
BseRI	GAGGAG	4 cut(s)	97, 237, 569, 940
BseSI	GKGCMC	1 cut(s)	1823
BseX3I	CGGCCG	1 cut(s)	47
BseYI	CCCAGC	1 cut(s)	1468
BsgI	GTGCAG	3 cut(s)	230, 926, 1126
Bsh1236I	CGCG	3 cut(s)	52, 54, 2041
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	7 cut(s)	49, 79, 114, 257, 269, 526, 857
BshNI	GGYRCC	1 cut(s)	227
BshVI	ATCGAT	1 cut(s)	408
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	3 cut(s)	462, 561, 897
BsiHKCI	CYCGRG	1 cut(s)	305
BsiSI	CCGG	2 cut(s)	46, 338
BslFI	GGGAC	5 cut(s)	927, 953, 1379, 1451, 1977
BslI	CCNNNNNNNGG	4 cut(s)	56, 264, 343, 1157
BsmAI	GTCTC	3 cut(s)	139, 162, 1214
BsmBI	CGTCTC	1 cut(s)	162
BsmFI	GGGAC	5 cut(s)	927, 953, 1379, 1451, 1977
BsmI	GAATGC	1 cut(s)	601
BsnI	GGCC	7 cut(s)	49, 79, 114, 257, 269, 526, 857
Bso31I	GGTCTC	1 cut(s)	139
BsoBI	CYCGRG	1 cut(s)	305
Bsp119I	TTCGAA	1 cut(s)	2138
Bsp1286I	GDGCHC	4 cut(s)	462, 561, 897, 1823
BspACI	CCGC	5 cut(s)	50, 54, 57, 242, 996
BspANI	GGCC	7 cut(s)	49, 79, 114, 257, 269, 526, 857
BspCNI	CTCAG	6 cut(s)	129, 474, 556, 1125, 1620, 1972
BspDI	ATCGAT	1 cut(s)	408
BspFNI	CGCG	3 cut(s)	52, 54, 2041
BspLI	GGNNCC	4 cut(s)	229, 486, 1658, 1749
BspPI	GGATC	6 cut(s)	1089, 1142, 1526, 1586, 1985, 2078
BspQI	GCTCTTC	1 cut(s)	1365
BspT104I	TTCGAA	1 cut(s)	2138
BspT107I	GGYRCC	1 cut(s)	227
BspTNI	GGTCTC	1 cut(s)	139
BsrDI	GCAATG	3 cut(s)	1888, 1908, 1908
BsrFI	RCCGGY	1 cut(s)	45
BsrI	ACTGG	3 cut(s)	1099, 1425, 1894
BssAI	RCCGGY	1 cut(s)	45
BssECI	CCNNGG	6 cut(s)	80, 258, 270, 757, 1157, 2047
BssHII	GCGCGC	1 cut(s)	2039
BssNI	GRCGYC	4 cut(s)	9, 177, 228, 531
BssSI	CACGAG	1 cut(s)	655
BssT1I	CCWWGG	2 cut(s)	270, 2047
Bst2BI	CACGAG	1 cut(s)	655
Bst2UI	CCWGG	2 cut(s)	759, 1158
Bst4CI	ACNGT	5 cut(s)	1104, 1396, 1504, 2094, 2128
Bst6I	CTCTTC	1 cut(s)	1365
BstACI	GRCGYC	4 cut(s)	9, 177, 228, 531
BstAPI	GCANNNNNTGC	3 cut(s)	281, 1104, 1715
BstBAI	YACGTR	1 cut(s)	278
BstBI	TTCGAA	1 cut(s)	2138
BstC8I	GCNNGC	9 cut(s)	47, 450, 613, 877, 1047, 1191, 1551, 1673, 2041
BstDEI	CTNAG	7 cut(s)	116, 461, 564, 1112, 1607, 1970, 1980
BstF5I	GGATG	5 cut(s)	580, 853, 1153, 1432, 1645
BstFNI	CGCG	3 cut(s)	52, 54, 2041
BstH2I	RGCGCY	2 cut(s)	231, 380
BstHHI	GCGC	5 cut(s)	54, 230, 379, 2041, 2043
BstMAI	GTCTC	3 cut(s)	139, 162, 1214
BstMCI	CGRYCG	1 cut(s)	50
BstNI	CCWGG	2 cut(s)	759, 1158
BstPAI	GACNNNNGTC	1 cut(s)	534
BstSCI	CCNGG	3 cut(s)	336, 757, 1156
BstSFI	CTRYAG	1 cut(s)	774
BstSLI	GKGCMC	1 cut(s)	1823
BstUI	CGCG	3 cut(s)	52, 54, 2041
BstV2I	GAAGAC	1 cut(s)	714
BstX2I	RGATCY	4 cut(s)	213, 1081, 1147, 1591
BstYI	RGATCY	4 cut(s)	213, 1081, 1147, 1591
BstZI	CGGCCG	1 cut(s)	47
Bsu15I	ATCGAT	1 cut(s)	408
BsuRI	GGCC	7 cut(s)	49, 79, 114, 257, 269, 526, 857
BsuTUI	ATCGAT	1 cut(s)	408
BtsCI	GGATG	5 cut(s)	580, 853, 1153, 1432, 1645
BtsIMutI	CAGTG	4 cut(s)	1092, 1109, 1418, 1500
Cac8I	GCNNGC	9 cut(s)	47, 450, 613, 877, 1047, 1191, 1551, 1673, 2041
CaiI	CAGNNNCTG	1 cut(s)	2132
CfoI	GCGC	5 cut(s)	54, 230, 379, 2041, 2043
Cfr10I	RCCGGY	1 cut(s)	45
Cfr13I	GGNCC	6 cut(s)	267, 485, 856, 1748, 1892, 1974
ClaI	ATCGAT	1 cut(s)	408
Csp6I	GTAC	4 cut(s)	325, 635, 1352, 1505
CviAII	CATG	4 cut(s)	1142, 1256, 1267, 1927
CviQI	GTAC	4 cut(s)	325, 635, 1352, 1505
DdeI	CTNAG	7 cut(s)	116, 461, 564, 1112, 1607, 1970, 1980
DinI	GGCGCC	1 cut(s)	229
DraI	TTTAAA	1 cut(s)	1414
DraIII	CACNNNGTG	1 cut(s)	42
DrdI	GACNNNNNNGTC	1 cut(s)	176
DseDI	GACNNNNNNGTC	1 cut(s)	176
EaeI	YGGCCR	1 cut(s)	47
EagI	CGGCCG	1 cut(s)	47
Eam1104I	CTCTTC	1 cut(s)	1365
EarI	CTCTTC	1 cut(s)	1365
Ecl136II	GAGCTC	3 cut(s)	460, 559, 895
EclXI	CGGCCG	1 cut(s)	47
Eco130I	CCWWGG	2 cut(s)	270, 2047
Eco147I	AGGCCT	1 cut(s)	526
Eco24I	GRGCYC	3 cut(s)	462, 561, 897
Eco31I	GGTCTC	1 cut(s)	139
Eco47I	GGWCC	4 cut(s)	485, 1748, 1892, 1974
Eco47III	AGCGCT	1 cut(s)	378
Eco52I	CGGCCG	1 cut(s)	47
Eco53kI	GAGCTC	3 cut(s)	460, 559, 895
Eco57I	CTGAAG	5 cut(s)	11, 554, 1200, 1824, 2055
Eco72I	CACGTG	1 cut(s)	278
Eco88I	CYCGRG	1 cut(s)	305
EcoICRI	GAGCTC	3 cut(s)	460, 559, 895
EcoO109I	RGGNCCY	3 cut(s)	267, 485, 1974
EcoRII	CCWGG	2 cut(s)	757, 1156
EcoT14I	CCWWGG	2 cut(s)	270, 2047
EcoT22I	ATGCAT	1 cut(s)	1483
EcoT38I	GRGCYC	3 cut(s)	462, 561, 897
EgeI	GGCGCC	1 cut(s)	229
EheI	GGCGCC	1 cut(s)	229
ErhI	CCWWGG	2 cut(s)	270, 2047
Esp3I	CGTCTC	1 cut(s)	162
FaeI	CATG	4 cut(s)	1145, 1259, 1270, 1930
FalI	AAGNNNNNCTT	6 cut(s)	948, 980, 1173, 1205, 1178, 1210
FaqI	GGGAC	5 cut(s)	927, 953, 1379, 1451, 1977
FatI	CATG	4 cut(s)	1141, 1255, 1266, 1926
FbaI	TGATCA	1 cut(s)	426
FblI	GTMKAC	2 cut(s)	183, 702
FokI	GGATG	5 cut(s)	587, 860, 1140, 1439, 1652
FriOI	GRGCYC	3 cut(s)	462, 561, 897
GlaI	GCGC	5 cut(s)	53, 229, 378, 2040, 2042
GsaI	CCCAGC	1 cut(s)	1472
GsuI	CTGGAG	1 cut(s)	572
HaeII	RGCGCY	2 cut(s)	231, 380
HaeIII	GGCC	7 cut(s)	49, 79, 114, 257, 269, 526, 857
HapII	CCGG	2 cut(s)	46, 338
HhaI	GCGC	5 cut(s)	54, 230, 379, 2041, 2043
Hin1I	GRCGYC	4 cut(s)	9, 177, 228, 531
Hin1II	CATG	4 cut(s)	1145, 1259, 1270, 1930
Hin6I	GCGC	5 cut(s)	52, 228, 377, 2039, 2041
HinP1I	GCGC	5 cut(s)	52, 228, 377, 2039, 2041
HincII	GTYRAC	3 cut(s)	184, 519, 1008
HindII	GTYRAC	3 cut(s)	184, 519, 1008
HindIII	AAGCTT	3 cut(s)	1187, 1669, 1806
HinfI	GANTC	6 cut(s)	64, 349, 358, 644, 1029, 1162
HpaII	CCGG	2 cut(s)	46, 338
HphI	GGTGA	6 cut(s)	203, 214, 358, 406, 1099, 1769
Hpy166II	GTNNAC	9 cut(s)	36, 184, 298, 519, 703, 1008, 1090, 1264, 1403
Hpy8I	GTNNAC	9 cut(s)	36, 184, 298, 519, 703, 1008, 1090, 1264, 1403
Hpy99I	CGWCG	9 cut(s)	14, 20, 73, 76, 154, 182, 185, 188, 544
HpyAV	CCTTC	6 cut(s)	199, 616, 1175, 1505, 1855, 2033
HpyCH4III	ACNGT	5 cut(s)	1104, 1396, 1504, 2094, 2128
HpyCH4IV	ACGT	4 cut(s)	177, 277, 386, 531
HpyF3I	CTNAG	7 cut(s)	116, 461, 564, 1112, 1607, 1970, 1980
HpySE526I	ACGT	4 cut(s)	177, 277, 386, 531
Hsp92I	GRCGYC	4 cut(s)	9, 177, 228, 531
Hsp92II	CATG	4 cut(s)	1145, 1259, 1270, 1930
HspAI	GCGC	5 cut(s)	52, 228, 377, 2039, 2041
KasI	GGCGCC	1 cut(s)	227
KroI	GCCGGC	1 cut(s)	45
KroNI	GCCGGC	1 cut(s)	47
Ksp22I	TGATCA	1 cut(s)	426
LguI	GCTCTTC	1 cut(s)	1365
LmnI	GCTCC	2 cut(s)	457, 556
LweI	GCATC	4 cut(s)	565, 1369, 1603, 1705
MaeII	ACGT	4 cut(s)	177, 277, 386, 531
MaeIII	GTNAC	3 cut(s)	838, 1494, 1798
MboII	GAAGA	7 cut(s)	17, 714, 779, 1241, 1352, 1772, 2102
MfeI	CAATTG	2 cut(s)	675, 1347
MflI	RGATCY	4 cut(s)	213, 1081, 1147, 1591
MhlI	GDGCHC	4 cut(s)	462, 561, 897, 1823
Mly113I	GGCGCC	1 cut(s)	228
MlyI	GAGTC	4 cut(s)	58, 352, 638, 1038
MmeI	TCCRAC	3 cut(s)	41, 92, 563
Mph1103I	ATGCAT	1 cut(s)	1483
MroNI	GCCGGC	1 cut(s)	45
MroXI	GAANNNNTTC	1 cut(s)	1764
MslI	CAYNNNNRTG	1 cut(s)	610
MspA1I	CMGCKG	1 cut(s)	996
MspI	CCGG	2 cut(s)	46, 338
MspR9I	CCNGG	3 cut(s)	338, 759, 1158
MunI	CAATTG	2 cut(s)	675, 1347
Mva1269I	GAATGC	1 cut(s)	601
MvaI	CCWGG	2 cut(s)	759, 1158
MvnI	CGCG	3 cut(s)	52, 54, 2041
NaeI	GCCGGC	1 cut(s)	47
NarI	GGCGCC	1 cut(s)	228
NciI	CCSGG	1 cut(s)	338
NgoMIV	GCCGGC	1 cut(s)	45
NlaIII	CATG	4 cut(s)	1145, 1259, 1270, 1930
NlaIV	GGNNCC	4 cut(s)	229, 486, 1658, 1749
NmeAIII	GCCGAG	2 cut(s)	105, 283
NmuCI	GTSAC	1 cut(s)	1494
NsiI	ATGCAT	1 cut(s)	1483
NspV	TTCGAA	1 cut(s)	2138
PauI	GCGCGC	1 cut(s)	2039
PceI	AGGCCT	1 cut(s)	526
PciSI	GCTCTTC	1 cut(s)	1365
PcsI	WCGNNNNNNNCGW	4 cut(s)	18, 77, 177, 653
PctI	GAATGC	1 cut(s)	601
PdiI	GCCGGC	1 cut(s)	47
PdmI	GAANNNNTTC	1 cut(s)	1764
PfeI	GAWTC	2 cut(s)	349, 1162
PflFI	GACNNNGTC	1 cut(s)	179
PleI	GAGTC	4 cut(s)	58, 352, 638, 1037
PluTI	GGCGCC	1 cut(s)	231
PmaCI	CACGTG	1 cut(s)	278
PmlI	CACGTG	1 cut(s)	278
PpsI	GAGTC	4 cut(s)	58, 352, 638, 1037
Ppu21I	YACGTR	1 cut(s)	278
PpuMI	RGGWCCY	2 cut(s)	485, 1974
PshAI	GACNNNNGTC	1 cut(s)	534
Psp124BI	GAGCTC	3 cut(s)	462, 561, 897
Psp5II	RGGWCCY	2 cut(s)	485, 1974
Psp6I	CCWGG	2 cut(s)	757, 1156
PspCI	CACGTG	1 cut(s)	278
PspFI	CCCAGC	1 cut(s)	1468
PspGI	CCWGG	2 cut(s)	757, 1156
PspN4I	GGNNCC	4 cut(s)	229, 486, 1658, 1749
PspPI	GGNCC	6 cut(s)	267, 485, 856, 1748, 1892, 1974
PspPPI	RGGWCCY	2 cut(s)	485, 1974
PstNI	CAGNNNCTG	1 cut(s)	2132
PsuI	RGATCY	4 cut(s)	213, 1081, 1147, 1591
PsyI	GACNNNGTC	1 cut(s)	179
PteI	GCGCGC	1 cut(s)	2039
RsaI	GTAC	4 cut(s)	326, 636, 1353, 1506
RsaNI	GTAC	4 cut(s)	325, 635, 1352, 1505
RseI	CAYNNNNRTG	1 cut(s)	610
SacI	GAGCTC	3 cut(s)	462, 561, 897
SalI	GTCGAC	1 cut(s)	182
SapI	GCTCTTC	1 cut(s)	1365
Sau96I	GGNCC	6 cut(s)	267, 485, 856, 1748, 1892, 1974
SchI	GAGTC	4 cut(s)	58, 352, 638, 1038
ScrFI	CCNGG	3 cut(s)	338, 759, 1158
SduI	GDGCHC	4 cut(s)	462, 561, 897, 1823
SfaNI	GCATC	4 cut(s)	565, 1369, 1603, 1705
SfcI	CTRYAG	1 cut(s)	774
SfoI	GGCGCC	1 cut(s)	229
SfuI	TTCGAA	1 cut(s)	2138
SgrDI	CGTCGACG	1 cut(s)	182
SinI	GGWCC	4 cut(s)	485, 1748, 1892, 1974
SmiMI	CAYNNNNRTG	1 cut(s)	610
SmlI	CTYRAG	2 cut(s)	716, 1124
SmoI	CTYRAG	2 cut(s)	716, 1124
SseBI	AGGCCT	1 cut(s)	526
SsiI	CCGC	5 cut(s)	50, 54, 57, 242, 996
SspDI	GGCGCC	1 cut(s)	227
SspI	AATATT	1 cut(s)	1843
SstI	GAGCTC	3 cut(s)	462, 561, 897
StuI	AGGCCT	1 cut(s)	526
StyD4I	CCNGG	3 cut(s)	336, 757, 1156
StyI	CCWWGG	2 cut(s)	270, 2047
TaaI	ACNGT	5 cut(s)	1104, 1396, 1504, 2094, 2128
TaiI	ACGT	4 cut(s)	180, 280, 389, 534
TaqI	TCGA	7 cut(s)	166, 183, 220, 408, 647, 2113, 2138
TaqII	GACCGA	2 cut(s)	163, 1241
TatI	WGTACW	1 cut(s)	1504
TauI	GCSGC	3 cut(s)	52, 57, 999
TfiI	GAWTC	2 cut(s)	349, 1162
TscAI	CASTG	4 cut(s)	1099, 1109, 1425, 1507
TseFI	GTSAC	1 cut(s)	1494
Tsp45I	GTSAC	1 cut(s)	1494
TspDTI	ATGAA	5 cut(s)	882, 1130, 1299, 1548, 1801
TspGWI	ACGGA	5 cut(s)	201, 283, 557, 860, 1590
TspRI	CASTG	4 cut(s)	1099, 1109, 1425, 1507
Tth111I	GACNNNGTC	1 cut(s)	179
VpaK11BI	GGWCC	4 cut(s)	485, 1748, 1892, 1974
XapI	RAATTY	5 cut(s)	366, 397, 468, 869, 2140
XbaI	TCTAGA	1 cut(s)	1312
XcmI	CCANNNNNNNNNTGG	1 cut(s)	978
XmaJI	CCTAGG	1 cut(s)	2047
XmiI	GTMKAC	2 cut(s)	183, 702
XmnI	GAANNNNTTC	1 cut(s)	1764
ZraI	GACGTC	2 cut(s)	178, 532
Zsp2I	ATGCAT	1 cut(s)	1483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.