Zinc finger SWIM domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33925 AT4G33925 |
| fragaria_vesca | FvH4_2g04570 |
| malus_domestica | MD00G1205200.v1.1 MD10G1101800.v1.1 |
| prunus_persica | Prupe.8G139500_v2.0.a1 Prupe.8G139500_v2.0.a1 Prupe.8G139500_v2.0.a1 Prupe.8G139500_v2.0.a1 |
| pyrus_communis | pycom10g08720 |
| rosa_chinensis | RchiOBHm_Chr6g0254151 |
| rosa_laevigata | RLG00000014939 |
| rosa_multiflora | Rmu_sc0000010.1_g000027 Rmu_sc0003711.1_g000002 |
| rosa_roxburghii | Rroxscaffold_7G00211120 |
| rosa_rugosa | Rorug05G0550100 Rorug05G0550200 |
| rosa_samantha | Rh6AG066600 Rh6BG059700 Rh6CG059400 Rh6DG056300 Rh6DG056600 |
| rosa_wichuraiana | Rw6G005850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 144 |
| AgsI | TTSAA | 1 cut(s) | 12 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 143, 175 |
| AluBI | AGCT | 2 cut(s) | 18, 79 |
| AluI | AGCT | 2 cut(s) | 18, 79 |
| AlwI | GGATC | 1 cut(s) | 144 |
| AsuC2I | CCSGG | 1 cut(s) | 171 |
| AsuHPI | GGTGA | 2 cut(s) | 58, 176 |
| BanII | GRGCYC | 1 cut(s) | 171 |
| BccI | CCATC | 1 cut(s) | 191 |
| BcnI | CCSGG | 1 cut(s) | 171 |
| Bme1390I | CCNGG | 1 cut(s) | 171 |
| BmrFI | CCNGG | 1 cut(s) | 171 |
| BpuMI | CCSGG | 1 cut(s) | 171 |
| BsiSI | CCGG | 1 cut(s) | 171 |
| Bsp1286I | GDGCHC | 1 cut(s) | 171 |
| Bsp143I | GATC | 2 cut(s) | 73, 136 |
| BspPI | GGATC | 1 cut(s) | 144 |
| BssMI | GATC | 2 cut(s) | 73, 136 |
| Bst6I | CTCTTC | 1 cut(s) | 146 |
| BstKTI | GATC | 2 cut(s) | 76, 139 |
| BstMBI | GATC | 2 cut(s) | 73, 136 |
| BstSCI | CCNGG | 1 cut(s) | 169 |
| BtsI | GCAGTG | 1 cut(s) | 39 |
| BtsIMutI | CAGTG | 1 cut(s) | 39 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 114, 149 |
| CviJI | RGCY | 3 cut(s) | 18, 79, 169 |
| CviKI_1 | RGCY | 3 cut(s) | 18, 79, 169 |
| DpnI | GATC | 2 cut(s) | 75, 138 |
| DpnII | GATC | 2 cut(s) | 73, 136 |
| Eam1104I | CTCTTC | 1 cut(s) | 146 |
| EarI | CTCTTC | 1 cut(s) | 146 |
| Eco24I | GRGCYC | 1 cut(s) | 171 |
| EcoT38I | GRGCYC | 1 cut(s) | 171 |
| FriOI | GRGCYC | 1 cut(s) | 171 |
| HapII | CCGG | 1 cut(s) | 171 |
| HincII | GTYRAC | 1 cut(s) | 54 |
| HindII | GTYRAC | 1 cut(s) | 54 |
| HinfI | GANTC | 1 cut(s) | 50 |
| HpaII | CCGG | 1 cut(s) | 171 |
| HphI | GGTGA | 2 cut(s) | 58, 176 |
| Hpy166II | GTNNAC | 1 cut(s) | 54 |
| Hpy188I | TCNGA | 1 cut(s) | 141 |
| Hpy8I | GTNNAC | 1 cut(s) | 54 |
| Hpy99I | CGWCG | 1 cut(s) | 74 |
| HpyAV | CCTTC | 1 cut(s) | 34 |
| HpyCH4V | TGCA | 2 cut(s) | 26, 91 |
| Kzo9I | GATC | 2 cut(s) | 73, 136 |
| LpnPI | CCDG | 3 cut(s) | 101, 176, 184 |
| MaeIII | GTNAC | 1 cut(s) | 64 |
| MalI | GATC | 2 cut(s) | 75, 138 |
| MboI | GATC | 2 cut(s) | 73, 136 |
| MboII | GAAGA | 2 cut(s) | 118, 163 |
| MhlI | GDGCHC | 1 cut(s) | 171 |
| MluCI | AATT | 1 cut(s) | 7 |
| MlyI | GAGTC | 1 cut(s) | 59 |
| MnlI | CCTC | 3 cut(s) | 22, 137, 147 |
| MspI | CCGG | 1 cut(s) | 171 |
| MspR9I | CCNGG | 1 cut(s) | 171 |
| NciI | CCSGG | 1 cut(s) | 171 |
| NdeII | GATC | 2 cut(s) | 73, 136 |
| NmuCI | GTSAC | 1 cut(s) | 64 |
| PleI | GAGTC | 1 cut(s) | 58 |
| PpsI | GAGTC | 1 cut(s) | 58 |
| Sau3AI | GATC | 2 cut(s) | 73, 136 |
| SchI | GAGTC | 1 cut(s) | 59 |
| ScrFI | CCNGG | 1 cut(s) | 171 |
| SduI | GDGCHC | 1 cut(s) | 171 |
| SetI | ASST | 4 cut(s) | 20, 81, 148, 195 |
| SgeI | CNNG | 9 cut(s) | 24, 31, 69, 100, 109, 124, 138, 182, 183 |
| Sse9I | AATT | 1 cut(s) | 7 |
| StyD4I | CCNGG | 1 cut(s) | 169 |
| TasI | AATT | 1 cut(s) | 7 |
| TscAI | CASTG | 1 cut(s) | 39 |
| TseFI | GTSAC | 1 cut(s) | 64 |
| Tsp45I | GTSAC | 1 cut(s) | 64 |
| TspGWI | ACGGA | 1 cut(s) | 73 |
| TspRI | CASTG | 1 cut(s) | 39 |