Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0013865

Physical Location & Seq

Genomic Coordinates Reverse (-)

16871288 .. 16872949

Gene Structure 1662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1064900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1662 bp

ATGGAGATTGCGACGGCGTTGCTGGTTTTAACAGCCATCACGGCTTACCTCCTTTGGTTAACCTTCATCTCACGGTCGCTGAAGGGTCCACGTGTCTGGGCGTTACTGGGTAGTCTCCCGGGGCTCATTGAAAACTCGGACCGGTTGCACGACTGGATCTACGACAACCTACGCGCCTGCGGCGGCACGTACCAAACCTGCATCTGCGCCATCCCCTTCCTCGCCAAAAAGCAAGGCCTCGTGACCGTCACGTGCGACCCGAAGAATCTGGAGCACATACTCAAGACCCGGTTCGACAACTACCCCAAGGGCCCCACCTGGCAATCAGTGTTTCACGAGTTGTTGGGGGAGGGCATCTTCAACTCGGATGGCGACACGTGGCTGTTTCAGAGGAAGACGGCCGCACTTGAGTTCACCACCCGGACGCTGCGCCAAGCCATGGCTCGGTGGGTCAGCCGAGCCATCAAGCTCAGGTTCTGCCCGATTCTCAAGTCGGCTGAGCTCCAAGCTAAACCGGTTGATCTCCAAGACCTGTTACTTCGGCTCACTTTTGATAACATATGTGGCTTGGCTTTCGGGAAGGATCCGGAGACTTGTGCCCCGGGTTTTCCTGACAACGGCTTTGCCATGGCCTTCGACCAAGCCACCGAAGCCTCGCTGCAGCGGTTTATCCTGCCAGAGGTGTTGTGGAAGCTGAAAAAGTGGCTTGGGCTTGGAATGGAAGTCACATTGAGCCGAAGCCTTGTGCATATTGAGGAGTATTTATCCGATGTGATTGCATCCCGTAAGCTCGAGTTGCTGAGTCAGCAAAAAGATGGGAACCCACACGATGATATGTTGTCAAGGTTCATGAAGAAAAAAGAGAACTACTCGGACACTTTTCTCCAACAAGTGGCGCTCAATTTCATCCTAGCTGGACGTGACACATCATCAGCTGCGCTAAGCTGGTTCTTTTGGTTGATCACTCTAAACCCAATGATTGAAGACAAAATTCTGCGTGAAATTTGCACCGTTCTGATCGAGACACGTGGCGATGATATGGCAAGTTGGTTGGACGAGCCGTTGGAATTTGAGGAAATTGACCGATTGATATACCTCAAGGCAGCATTGTGCGAGAGCCTTAGGTTGTACCCTTCCGTACCCGAGGACTCAAAGCATGTGGTGTGCGACGACGTTTTGCCGGATGGCACATTTGTCCCCGCCGGATCATCGGTGACATACTCCATATACGCAACGGGGCGGATGAAATCGACGTGGGGAGACGATTGTCTAGAGTTTCTCCCGGAGAGGTGGCTATCTCCCGATGGTAAGAAGTTCATAATGCATGACTCAAATAAATTTGTGGCCTTCAACGCCGGTCCAAGAATATGTCTGGGGAAGGACTTGGCTTACTTGCAAATGAAGTCAGTAACCGCGTCGGTTTTGCTCCACCACCGTCTCACGGTGGTGCCGGGCCACAAGGTGGAGCAAAAGATGTCGTTAACGTTGTTCATGAAATATGGACTCATGGTGAATGTGCACAAAAGGGATCTGGGGGCAATTTTATCAAGCATTAAAAAGGAGATGACGACGGAGGGACAATTGCAAGGGGAAGAGCAAGAGTGTGTGGCCGTTGAATGTAACGGTGACAGTGGTGGTGGAGCGGTGGTCGGGGTGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009987 GO:0016491 GO:0016705 GO:0016713 GO:0018685 GO:0019752 GO:0032787 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0055114 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00073 ko01100 map00073 map01100

Pfam Domains

Protein Families

p450

Protein Analysis

554

Amino Acids

62.14

Weight (kDa)

5.86

Isoelectric Point (pI)

51.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	30 - 495	3e-60	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013865)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01600 AT2G45970 AT4G00360
fragaria_vesca	FvH4_7g14480
malus_domestica	MD01G1064900.v1.1 MD07G1135500.v1.1
prunus_persica	Prupe.2G171800_v2.0.a1
pyrus_communis	pycom01g09420 pycom07g13270
rosa_chinensis	RchiOBHm_Chr1g0355891
rosa_laevigata	RLG00000028118
rosa_roxburghii	Rroxscaffold_4G00299940
rosa_rugosa	Rorug01G0248200
rosa_samantha	Rh1AG261500 Rh1BG229800 Rh1DG257800
rosa_wichuraiana	Rw1G023090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	206
AccB1I	GGYRCC	1 cut(s)	1447
AccB7I	CCANNNNNTGG	3 cut(s)	439, 892, 1462
AccBSI	CCGCTC	1 cut(s)	1643
AccII	CGCG	2 cut(s)	174, 1415
AccIII	TCCGGA	1 cut(s)	586
AciI	CCGC	8 cut(s)	180, 183, 402, 664, 1200, 1240, 1413, 1643
AclI	AACGTT	1 cut(s)	1484
AclWI	GGATC	5 cut(s)	164, 578, 591, 1213, 1536
AcoI	YGGCCR	2 cut(s)	399, 1608
AcsI	RAATTY	4 cut(s)	990, 1002, 1067, 1337
AcuI	CTGAAG	1 cut(s)	101
AcvI	CACGTG	4 cut(s)	92, 252, 378, 1028
AdeI	CACNNNGTG	1 cut(s)	1462
AfaI	GTAC	3 cut(s)	191, 1130, 1140
AfiI	CCNNNNNNNGG	7 cut(s)	439, 444, 617, 679, 892, 1441, 1462
AflIII	ACRYGT	3 cut(s)	91, 375, 1025
AgeI	ACCGGT	2 cut(s)	141, 514
AgsI	TTSAA	5 cut(s)	131, 361, 983, 1351, 1616
AjiI	CACGTC	2 cut(s)	920, 1254
AjnI	CCWGG	1 cut(s)	317
AleI	CACNNNNGTG	1 cut(s)	1445
AluBI	AGCT	8 cut(s)	469, 502, 509, 694, 790, 914, 935, 945
AluI	AGCT	8 cut(s)	469, 502, 509, 694, 790, 914, 935, 945
Alw21I	GWGCWC	3 cut(s)	276, 504, 1521
Alw26I	GTCTC	5 cut(s)	119, 584, 1016, 1254, 1442
Alw44I	GTGCAC	1 cut(s)	1517
AlwI	GGATC	5 cut(s)	164, 578, 591, 1213, 1536
AlwNI	CAGNNNCTG	1 cut(s)	477
Ama87I	CYCGRG	4 cut(s)	118, 601, 791, 1142
Aor13HI	TCCGGA	1 cut(s)	586
AoxI	GGCC	7 cut(s)	235, 310, 399, 630, 1344, 1453, 1608
ApaI	GGGCCC	1 cut(s)	314
ApaLI	GTGCAC	1 cut(s)	1517
ApeKI	GCWGC	5 cut(s)	427, 658, 661, 935, 1103
ApoI	RAATTY	4 cut(s)	990, 1002, 1067, 1337
ArsI	GACNNNNNNTTYG	2 cut(s)	605, 637
AsiGI	ACCGGT	2 cut(s)	141, 514
AspLEI	GCGC	5 cut(s)	176, 209, 432, 898, 940
AspS9I	GGNCC	6 cut(s)	86, 139, 310, 311, 1358, 1453
AsuC2I	CCSGG	8 cut(s)	119, 120, 289, 421, 602, 603, 1283, 1452
AsuHPI	GGTGA	4 cut(s)	406, 1225, 1522, 1637
AvaI	CYCGRG	4 cut(s)	118, 601, 791, 1142
AvaII	GGWCC	3 cut(s)	86, 139, 1358
AxyI	CCTNAGG	1 cut(s)	1121
BaeGI	GKGCMC	3 cut(s)	314, 601, 1521
BamHI	GGATCC	1 cut(s)	583
BanI	GGYRCC	1 cut(s)	1447
BanII	GRGCYC	3 cut(s)	126, 314, 504
BauI	CACGAG	2 cut(s)	239, 335
BbrPI	CACGTG	4 cut(s)	92, 252, 378, 1028
BbsI	GAAGAC	2 cut(s)	401, 990
Bbv12I	GWGCWC	3 cut(s)	276, 504, 1521
BbvI	GCAGC	5 cut(s)	414, 645, 673, 922, 1115
BccI	CCATC	7 cut(s)	44, 218, 362, 470, 809, 1178, 1298
BceAI	ACGGC	6 cut(s)	30, 57, 414, 634, 1045, 1595
BcgI	CGANNNNNNTGC	3 cut(s)	35, 758, 792
BciT130I	CCWGG	1 cut(s)	319
BclI	TGATCA	1 cut(s)	960
BcnI	CCSGG	8 cut(s)	119, 120, 289, 421, 602, 603, 1283, 1452
BcoDI	GTCTC	5 cut(s)	119, 584, 1016, 1254, 1442
BfaI	CTAG	2 cut(s)	911, 1271
BfmI	CTRYAG	1 cut(s)	659
BfoI	RGCGCY	1 cut(s)	899
BfuAI	ACCTGC	1 cut(s)	206
BglI	GCCNNNNNGGC	1 cut(s)	41
BisI	GCNGC	8 cut(s)	181, 184, 402, 428, 659, 662, 936, 1104
BlpI	GCTNAGC	2 cut(s)	498, 941
BlsI	GCNGC	8 cut(s)	182, 185, 403, 429, 660, 663, 937, 1105
Bme1390I	CCNGG	9 cut(s)	119, 120, 289, 319, 421, 602, 603, 1283, 1452
Bme18I	GGWCC	3 cut(s)	86, 139, 1358
BmeT110I	CYCGRG	4 cut(s)	118, 601, 791, 1142
BmgBI	CACGTC	2 cut(s)	920, 1254
BmgT120I	GGNCC	6 cut(s)	86, 139, 310, 311, 1358, 1453
BmiI	GGNNCC	6 cut(s)	87, 312, 313, 585, 821, 1449
BmrFI	CCNGG	9 cut(s)	119, 120, 289, 319, 421, 602, 603, 1283, 1452
BmrI	ACTGGG	1 cut(s)	116
BmsI	GCATC	3 cut(s)	210, 363, 788
BmuI	ACTGGG	1 cut(s)	116
BoxI	GACNNNNGTC	1 cut(s)	1266
BpiI	GAAGAC	2 cut(s)	401, 990
BplI	GAGNNNNNCTC	2 cut(s)	854, 886
BpmI	CTGGAG	1 cut(s)	290
Bpu10I	CCTNAGC	1 cut(s)	470
Bpu1102I	GCTNAGC	2 cut(s)	498, 941
BpuEI	CTTGAG	4 cut(s)	266, 428, 473, 1082
BpuMI	CCSGG	8 cut(s)	119, 120, 289, 421, 602, 603, 1283, 1452
BsaAI	YACGTR	5 cut(s)	92, 189, 252, 378, 1028
BsaJI	CCNNGG	8 cut(s)	118, 119, 306, 438, 600, 601, 627, 1143
BsaWI	WCCGGW	3 cut(s)	141, 514, 586
BsaXI	ACNNNNNCTCC	2 cut(s)	1632, 1662
Bsc4I	CCNNNNNNNGG	7 cut(s)	439, 444, 617, 679, 892, 1441, 1462
Bse118I	RCCGGY	3 cut(s)	141, 514, 1355
Bse1I	ACTGG	2 cut(s)	111, 158
Bse21I	CCTNAGG	1 cut(s)	1121
BseAI	TCCGGA	1 cut(s)	586
BseBI	CCWGG	1 cut(s)	319
BseDI	CCNNGG	8 cut(s)	118, 119, 306, 438, 600, 601, 627, 1143
BseGI	GGATG	6 cut(s)	210, 373, 779, 906, 1189, 1248
BseLI	CCNNNNNNNGG	7 cut(s)	439, 444, 617, 679, 892, 1441, 1462
BseMII	CTCAG	3 cut(s)	484, 489, 791
BseNI	ACTGG	2 cut(s)	111, 158
BseRI	GAGGAG	1 cut(s)	770
BseSI	GKGCMC	3 cut(s)	314, 601, 1521
BseX3I	CGGCCG	1 cut(s)	399
BseXI	GCAGC	5 cut(s)	414, 645, 673, 922, 1115
Bsh1236I	CGCG	2 cut(s)	174, 1415
Bsh1285I	CGRYCG	2 cut(s)	77, 402
BshFI	GGCC	7 cut(s)	237, 312, 401, 632, 1346, 1455, 1610
BshNI	GGYRCC	1 cut(s)	1447
BshTI	ACCGGT	2 cut(s)	141, 514
BsiEI	CGRYCG	2 cut(s)	77, 402
BsiHKAI	GWGCWC	3 cut(s)	276, 504, 1521
BsiHKCI	CYCGRG	4 cut(s)	118, 601, 791, 1142
BslFI	GGGAC	2 cut(s)	1181, 1590
BslI	CCNNNNNNNGG	7 cut(s)	439, 444, 617, 679, 892, 1441, 1462
BsmAI	GTCTC	5 cut(s)	119, 584, 1016, 1254, 1442
BsmBI	CGTCTC	2 cut(s)	1254, 1442
BsmFI	GGGAC	2 cut(s)	1181, 1590
BsnI	GGCC	7 cut(s)	237, 312, 401, 632, 1346, 1455, 1610
BsoBI	CYCGRG	4 cut(s)	118, 601, 791, 1142
Bsp120I	GGGCCC	1 cut(s)	310
Bsp1286I	GDGCHC	6 cut(s)	126, 276, 314, 504, 601, 1521
Bsp13I	TCCGGA	1 cut(s)	586
Bsp143I	GATC	7 cut(s)	156, 520, 583, 960, 1017, 1205, 1528
Bsp1720I	GCTNAGC	2 cut(s)	498, 941
Bsp19I	CCATGG	2 cut(s)	438, 627
BspACI	CCGC	8 cut(s)	180, 183, 402, 664, 1200, 1240, 1413, 1643
BspANI	GGCC	7 cut(s)	237, 312, 401, 632, 1346, 1455, 1610
BspCNI	CTCAG	3 cut(s)	483, 490, 792
BspEI	TCCGGA	1 cut(s)	586
BspFNI	CGCG	2 cut(s)	174, 1415
BspHI	TCATGA	2 cut(s)	849, 1491
BspLI	GGNNCC	6 cut(s)	87, 312, 313, 585, 821, 1449
BspMAI	CTGCAG	1 cut(s)	663
BspMI	ACCTGC	1 cut(s)	206
BspPI	GGATC	5 cut(s)	164, 578, 591, 1213, 1536
BspQI	GCTCTTC	1 cut(s)	1587
BspT107I	GGYRCC	1 cut(s)	1447
BsrBI	CCGCTC	1 cut(s)	1643
BsrFI	RCCGGY	3 cut(s)	141, 514, 1355
BsrI	ACTGG	2 cut(s)	111, 158
BssAI	RCCGGY	3 cut(s)	141, 514, 1355
BssECI	CCNNGG	8 cut(s)	118, 119, 306, 438, 600, 601, 627, 1143
BssMI	GATC	7 cut(s)	156, 520, 583, 960, 1017, 1205, 1528
BssSI	CACGAG	2 cut(s)	239, 335
BssT1I	CCWWGG	3 cut(s)	306, 438, 627
Bst2BI	CACGAG	2 cut(s)	239, 335
Bst2UI	CCWGG	1 cut(s)	319
Bst4CI	ACNGT	7 cut(s)	75, 247, 1012, 1436, 1444, 1625, 1631
Bst6I	CTCTTC	1 cut(s)	1587
BstBAI	YACGTR	5 cut(s)	92, 189, 252, 378, 1028
BstC8I	GCNNGC	1 cut(s)	178
BstDEI	CTNAG	5 cut(s)	470, 498, 800, 941, 1121
BstDSI	CCRYGG	2 cut(s)	438, 627
BstENI	CCTNNNNNAGG	1 cut(s)	677
BstF5I	GGATG	6 cut(s)	210, 373, 779, 906, 1189, 1248
BstFNI	CGCG	2 cut(s)	174, 1415
BstH2I	RGCGCY	1 cut(s)	899
BstHHI	GCGC	5 cut(s)	176, 209, 432, 898, 940
BstKTI	GATC	7 cut(s)	159, 523, 586, 963, 1020, 1208, 1531
BstMAI	GTCTC	5 cut(s)	119, 584, 1016, 1254, 1442
BstMBI	GATC	7 cut(s)	156, 520, 583, 960, 1017, 1205, 1528
BstMCI	CGRYCG	2 cut(s)	77, 402
BstMWI	GCNNNNNNNGC	6 cut(s)	41, 180, 650, 796, 805, 1352
BstNI	CCWGG	1 cut(s)	319
BstNSI	RCATGY	1 cut(s)	1160
BstPAI	GACNNNNGTC	1 cut(s)	1266
BstSCI	CCNGG	9 cut(s)	117, 118, 287, 317, 419, 600, 601, 1281, 1450
BstSFI	CTRYAG	1 cut(s)	659
BstSLI	GKGCMC	3 cut(s)	314, 601, 1521
BstUI	CGCG	2 cut(s)	174, 1415
BstV1I	GCAGC	5 cut(s)	414, 645, 673, 922, 1115
BstV2I	GAAGAC	2 cut(s)	401, 990
BstX2I	RGATCY	3 cut(s)	156, 583, 1528
BstXI	CCANNNNNNTGG	1 cut(s)	96
BstYI	RGATCY	3 cut(s)	156, 583, 1528
BstZI	CGGCCG	1 cut(s)	399
Bsu36I	CCTNAGG	1 cut(s)	1121
BsuRI	GGCC	7 cut(s)	237, 312, 401, 632, 1346, 1455, 1610
BtgI	CCRYGG	2 cut(s)	438, 627
BtgZI	GCGATG	1 cut(s)	1047
BtrI	CACGTC	2 cut(s)	920, 1254
BtsCI	GGATG	6 cut(s)	210, 373, 779, 906, 1189, 1248
BtsIMutI	CAGTG	2 cut(s)	333, 1636
BveI	ACCTGC	1 cut(s)	206
Cac8I	GCNNGC	1 cut(s)	178
CaiI	CAGNNNCTG	1 cut(s)	477
CciI	TCATGA	2 cut(s)	849, 1491
CfoI	GCGC	5 cut(s)	176, 209, 432, 898, 940
Cfr10I	RCCGGY	3 cut(s)	141, 514, 1355
Cfr13I	GGNCC	6 cut(s)	86, 139, 310, 311, 1358, 1453
Cfr9I	CCCGGG	2 cut(s)	118, 601
CpoI	CGGWCCG	1 cut(s)	139
CseI	GACGC	2 cut(s)	433, 1404
Csp6I	GTAC	3 cut(s)	190, 1129, 1139
CspAI	ACCGGT	2 cut(s)	141, 514
CspCI	CAANNNNNGTGG	2 cut(s)	1140, 1175
CspI	CGGWCCG	1 cut(s)	139
CviAII	CATG	7 cut(s)	439, 628, 850, 1157, 1325, 1492, 1507
CviQI	GTAC	3 cut(s)	190, 1129, 1139
DdeI	CTNAG	5 cut(s)	470, 498, 800, 941, 1121
DpnI	GATC	7 cut(s)	158, 522, 585, 962, 1019, 1207, 1530
DpnII	GATC	7 cut(s)	156, 520, 583, 960, 1017, 1205, 1528
DraIII	CACNNNGTG	1 cut(s)	1462
EaeI	YGGCCR	2 cut(s)	399, 1608
EagI	CGGCCG	1 cut(s)	399
Eam1104I	CTCTTC	1 cut(s)	1587
EarI	CTCTTC	1 cut(s)	1587
EciI	GGCGGA	1 cut(s)	1255
Ecl136II	GAGCTC	1 cut(s)	502
EclXI	CGGCCG	1 cut(s)	399
Eco130I	CCWWGG	3 cut(s)	306, 438, 627
Eco147I	AGGCCT	1 cut(s)	237
Eco24I	GRGCYC	3 cut(s)	126, 314, 504
Eco47I	GGWCC	3 cut(s)	86, 139, 1358
Eco52I	CGGCCG	1 cut(s)	399
Eco53kI	GAGCTC	1 cut(s)	502
Eco57I	CTGAAG	1 cut(s)	101
Eco72I	CACGTG	4 cut(s)	92, 252, 378, 1028
Eco81I	CCTNAGG	1 cut(s)	1121
Eco88I	CYCGRG	4 cut(s)	118, 601, 791, 1142
EcoICRI	GAGCTC	1 cut(s)	502
EcoNI	CCTNNNNNAGG	1 cut(s)	677
EcoO109I	RGGNCCY	2 cut(s)	310, 311
EcoRII	CCWGG	1 cut(s)	317
EcoT14I	CCWWGG	3 cut(s)	306, 438, 627
EcoT22I	ATGCAT	1 cut(s)	1326
EcoT38I	GRGCYC	3 cut(s)	126, 314, 504
ErhI	CCWWGG	3 cut(s)	306, 438, 627
Esp3I	CGTCTC	2 cut(s)	1254, 1442
FaeI	CATG	7 cut(s)	442, 631, 853, 1160, 1328, 1495, 1510
FaqI	GGGAC	2 cut(s)	1181, 1590
FatI	CATG	7 cut(s)	438, 627, 849, 1156, 1324, 1491, 1506
FauI	CCCGC	1 cut(s)	1207
FauNDI	CATATG	1 cut(s)	560
FbaI	TGATCA	1 cut(s)	960
Fnu4HI	GCNGC	8 cut(s)	181, 184, 402, 428, 659, 662, 936, 1104
FokI	GGATG	6 cut(s)	197, 380, 766, 893, 1196, 1255
FriOI	GRGCYC	3 cut(s)	126, 314, 504
Fsp4HI	GCNGC	8 cut(s)	181, 184, 402, 428, 659, 662, 936, 1104
FspBI	CTAG	2 cut(s)	911, 1271
GlaI	GCGC	5 cut(s)	175, 208, 431, 897, 939
GluI	GCNGC	8 cut(s)	181, 184, 402, 428, 659, 662, 936, 1104
GsuI	CTGGAG	1 cut(s)	290
HaeII	RGCGCY	1 cut(s)	899
HaeIII	GGCC	7 cut(s)	237, 312, 401, 632, 1346, 1455, 1610
HgaI	GACGC	2 cut(s)	433, 1404
HhaI	GCGC	5 cut(s)	176, 209, 432, 898, 940
Hin1II	CATG	7 cut(s)	442, 631, 853, 1160, 1328, 1495, 1510
Hin6I	GCGC	5 cut(s)	174, 207, 430, 896, 938
HinP1I	GCGC	5 cut(s)	174, 207, 430, 896, 938
HincII	GTYRAC	2 cut(s)	60, 1482
HindII	GTYRAC	2 cut(s)	60, 1482
HinfI	GANTC	6 cut(s)	265, 484, 802, 1148, 1328, 1503
HpaI	GTTAAC	2 cut(s)	60, 1482
HphI	GGTGA	4 cut(s)	406, 1225, 1522, 1637
Hpy166II	GTNNAC	5 cut(s)	60, 89, 414, 1482, 1519
Hpy188I	TCNGA	6 cut(s)	139, 367, 390, 769, 874, 1017
Hpy8I	GTNNAC	5 cut(s)	60, 89, 414, 1482, 1519
Hpy99I	CGWCG	6 cut(s)	16, 1172, 1175, 1255, 1420, 1573
HpyAV	CCTTC	8 cut(s)	73, 76, 226, 574, 643, 1143, 1357, 1372
HpyCH4III	ACNGT	7 cut(s)	75, 247, 1012, 1436, 1444, 1625, 1631
HpyCH4IV	ACGT	9 cut(s)	91, 188, 251, 377, 919, 1027, 1173, 1253, 1484
HpyF10VI	GCNNNNNNNGC	6 cut(s)	41, 180, 650, 796, 805, 1352
HpyF3I	CTNAG	5 cut(s)	470, 498, 800, 941, 1121
HpySE526I	ACGT	9 cut(s)	91, 188, 251, 377, 919, 1027, 1173, 1253, 1484
Hsp92II	CATG	7 cut(s)	442, 631, 853, 1160, 1328, 1495, 1510
HspAI	GCGC	5 cut(s)	174, 207, 430, 896, 938
Kpn2I	TCCGGA	1 cut(s)	586
Ksp22I	TGATCA	1 cut(s)	960
KspAI	GTTAAC	2 cut(s)	60, 1482
Kzo9I	GATC	7 cut(s)	156, 520, 583, 960, 1017, 1205, 1528
LguI	GCTCTTC	1 cut(s)	1587
LmnI	GCTCC	5 cut(s)	271, 507, 1431, 1465, 1640
Lsp1109I	GCAGC	5 cut(s)	414, 645, 673, 922, 1115
LweI	GCATC	3 cut(s)	210, 363, 788
MaeI	CTAG	2 cut(s)	911, 1271
MaeII	ACGT	9 cut(s)	91, 188, 251, 377, 919, 1027, 1173, 1253, 1484
MalI	GATC	7 cut(s)	158, 522, 585, 962, 1019, 1207, 1530
MbiI	CCGCTC	1 cut(s)	1643
MboI	GATC	7 cut(s)	156, 520, 583, 960, 1017, 1205, 1528
MboII	GAAGA	6 cut(s)	274, 349, 406, 865, 995, 1604
MfeI	CAATTG	1 cut(s)	1580
MflI	RGATCY	3 cut(s)	156, 583, 1528
MhlI	GDGCHC	6 cut(s)	126, 276, 314, 504, 601, 1521
MluCI	AATT	8 cut(s)	901, 990, 1002, 1067, 1077, 1337, 1539, 1580
MlyI	GAGTC	4 cut(s)	811, 1142, 1322, 1497
MmeI	TCCRAC	3 cut(s)	910, 1032, 1044
Mph1103I	ATGCAT	1 cut(s)	1326
MroI	TCCGGA	1 cut(s)	586
MseI	TTAA	5 cut(s)	29, 59, 1481, 1554, 1660
MslI	CAYNNNNRTG	1 cut(s)	1445
MspA1I	CMGCKG	2 cut(s)	664, 935
MspR9I	CCNGG	9 cut(s)	119, 120, 289, 319, 421, 602, 603, 1283, 1452
MunI	CAATTG	1 cut(s)	1580
MvaI	CCWGG	1 cut(s)	319
MvnI	CGCG	2 cut(s)	174, 1415
MwoI	GCNNNNNNNGC	6 cut(s)	41, 180, 650, 796, 805, 1352
NciI	CCSGG	8 cut(s)	119, 120, 289, 421, 602, 603, 1283, 1452
NcoI	CCATGG	2 cut(s)	438, 627
NdeI	CATATG	1 cut(s)	560
NdeII	GATC	7 cut(s)	156, 520, 583, 960, 1017, 1205, 1528
NlaIII	CATG	7 cut(s)	442, 631, 853, 1160, 1328, 1495, 1510
NlaIV	GGNNCC	6 cut(s)	87, 312, 313, 585, 821, 1449
NmeAIII	GCCGAG	1 cut(s)	482
NmuCI	GTSAC	6 cut(s)	241, 247, 724, 920, 1213, 1625
NsiI	ATGCAT	1 cut(s)	1326
NspI	RCATGY	1 cut(s)	1160
OliI	CACNNNNGTG	1 cut(s)	1445
PaeR7I	CTCGAG	1 cut(s)	791
PagI	TCATGA	2 cut(s)	849, 1491
PceI	AGGCCT	1 cut(s)	237
PciSI	GCTCTTC	1 cut(s)	1587
PcsI	WCGNNNNNNNCGW	1 cut(s)	257
PfeI	GAWTC	2 cut(s)	265, 484
PflMI	CCANNNNNTGG	3 cut(s)	439, 892, 1462
PfoI	TCCNGGA	1 cut(s)	1281
PinAI	ACCGGT	2 cut(s)	141, 514
PkrI	GCNGC	8 cut(s)	182, 185, 403, 429, 660, 663, 937, 1105
PleI	GAGTC	4 cut(s)	810, 1142, 1322, 1497
PmaCI	CACGTG	4 cut(s)	92, 252, 378, 1028
PmlI	CACGTG	4 cut(s)	92, 252, 378, 1028
PpsI	GAGTC	4 cut(s)	810, 1142, 1322, 1497
Ppu21I	YACGTR	5 cut(s)	92, 189, 252, 378, 1028
PshAI	GACNNNNGTC	1 cut(s)	1266
Psp124BI	GAGCTC	1 cut(s)	504
Psp1406I	AACGTT	1 cut(s)	1484
Psp6I	CCWGG	1 cut(s)	317
PspCI	CACGTG	4 cut(s)	92, 252, 378, 1028
PspGI	CCWGG	1 cut(s)	317
PspN4I	GGNNCC	6 cut(s)	87, 312, 313, 585, 821, 1449
PspOMI	GGGCCC	1 cut(s)	310
PspPI	GGNCC	6 cut(s)	86, 139, 310, 311, 1358, 1453
PspXI	VCTCGAGB	1 cut(s)	791
PstI	CTGCAG	1 cut(s)	663
PstNI	CAGNNNCTG	1 cut(s)	477
PsuI	RGATCY	3 cut(s)	156, 583, 1528
PvuII	CAGCTG	1 cut(s)	935
RsaI	GTAC	3 cut(s)	191, 1130, 1140
RsaNI	GTAC	3 cut(s)	190, 1129, 1139
RseI	CAYNNNNRTG	1 cut(s)	1445
Rsr2I	CGGWCCG	1 cut(s)	139
RsrII	CGGWCCG	1 cut(s)	139
SacI	GAGCTC	1 cut(s)	504
SapI	GCTCTTC	1 cut(s)	1587
SaqAI	TTAA	5 cut(s)	29, 59, 1481, 1554, 1660
SatI	GCNGC	8 cut(s)	181, 184, 402, 428, 659, 662, 936, 1104
Sau3AI	GATC	7 cut(s)	156, 520, 583, 960, 1017, 1205, 1528
Sau96I	GGNCC	6 cut(s)	86, 139, 310, 311, 1358, 1453
SchI	GAGTC	4 cut(s)	811, 1142, 1322, 1497
ScrFI	CCNGG	9 cut(s)	119, 120, 289, 319, 421, 602, 603, 1283, 1452
SduI	GDGCHC	6 cut(s)	126, 276, 314, 504, 601, 1521
SfaNI	GCATC	3 cut(s)	210, 363, 788
SfcI	CTRYAG	1 cut(s)	659
Sfr274I	CTCGAG	1 cut(s)	791
SinI	GGWCC	3 cut(s)	86, 139, 1358
SlaI	CTCGAG	1 cut(s)	791
SmaI	CCCGGG	2 cut(s)	120, 603
SmiMI	CAYNNNNRTG	1 cut(s)	1445
SmlI	CTYRAG	5 cut(s)	281, 407, 488, 791, 1097
SmoI	CTYRAG	5 cut(s)	281, 407, 488, 791, 1097
Sse9I	AATT	8 cut(s)	901, 990, 1002, 1067, 1077, 1337, 1539, 1580
SseBI	AGGCCT	1 cut(s)	237
SsiI	CCGC	8 cut(s)	180, 183, 402, 664, 1200, 1240, 1413, 1643
SspMI	CTAG	2 cut(s)	911, 1271
SstI	GAGCTC	1 cut(s)	504
StuI	AGGCCT	1 cut(s)	237
StyD4I	CCNGG	9 cut(s)	117, 118, 287, 317, 419, 600, 601, 1281, 1450
StyI	CCWWGG	3 cut(s)	306, 438, 627
TaaI	ACNGT	7 cut(s)	75, 247, 1012, 1436, 1444, 1625, 1631
TaiI	ACGT	9 cut(s)	94, 191, 254, 380, 922, 1030, 1176, 1256, 1487
TaqI	TCGA	5 cut(s)	294, 636, 792, 1020, 1250
TaqII	GACCGA	1 cut(s)	1098
TasI	AATT	8 cut(s)	901, 990, 1002, 1067, 1077, 1337, 1539, 1580
TauI	GCSGC	3 cut(s)	183, 186, 404
TfiI	GAWTC	2 cut(s)	265, 484
Tru1I	TTAA	5 cut(s)	29, 59, 1481, 1554, 1660
Tru9I	TTAA	5 cut(s)	29, 59, 1481, 1554, 1660
TscAI	CASTG	2 cut(s)	333, 1636
TseFI	GTSAC	6 cut(s)	241, 247, 724, 920, 1213, 1625
TseI	GCWGC	5 cut(s)	427, 658, 661, 935, 1103
Tsp45I	GTSAC	6 cut(s)	241, 247, 724, 920, 1213, 1625
TspDTI	ATGAA	9 cut(s)	55, 838, 866, 895, 1259, 1306, 1415, 1480, 1508
TspGWI	ACGGA	2 cut(s)	1126, 1586
TspMI	CCCGGG	2 cut(s)	118, 601
TspRI	CASTG	2 cut(s)	333, 1636
Van91I	CCANNNNNTGG	3 cut(s)	439, 892, 1462
VneI	GTGCAC	1 cut(s)	1517
VpaK11BI	GGWCC	3 cut(s)	86, 139, 1358
XagI	CCTNNNNNAGG	1 cut(s)	677
XapI	RAATTY	4 cut(s)	990, 1002, 1067, 1337
XbaI	TCTAGA	1 cut(s)	1270
XceI	RCATGY	1 cut(s)	1160
XcmI	CCANNNNNNNNNTGG	1 cut(s)	684
XhoI	CTCGAG	1 cut(s)	791
XmaI	CCCGGG	2 cut(s)	118, 601
XspI	CTAG	2 cut(s)	911, 1271
Zsp2I	ATGCAT	1 cut(s)	1326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.