MD01G1081100.v1.1

Calcineurin B-like protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
18817696 .. 18817884
189 bp
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UTR
Exon/CDS
Intron
MD01G1081100.v1.1.491

Sequence Viewer

Length: 189 bp
ATGCTGTTGGCCTCTGCAAACCAGCGGGCTGATCAGACATTCAAGGATGCAGATGGAAAAGCGGATGGTAGAATTGACGAGGAAGAGTGGAAGGAATACGTAGCACAAAACCCTTCTTTGCTGAAAAACATGACTCTTCCATACTTAATGTACGTCCTAAAACCTAAACCTGCGTTCTGCAAACTTTAG

Protein Analysis

63

Amino Acids

7.11

Weight (kDa)

6.14

Isoelectric Point (pI)

16.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020380)

Species Orthologous Gene IDs
malus_domestica MD01G1081100.v1.1
rosa_chinensis RchiOBHm_Chr6g0269811
rosa_roxburghii Rroxscaffold_4G00314510
rosa_rugosa Rorug06G0050600
rosa_samantha Rh6CG169500 Rh6DG161300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 178
AciI CCGC 2 cut(s) 25, 62
AfaI GTAC 1 cut(s) 152
AgsI TTSAA 1 cut(s) 43
AoxI GGCC 1 cut(s) 9
BccI CCATC 2 cut(s) 47, 59
BclI TGATCA 1 cut(s) 31
BfuAI ACCTGC 1 cut(s) 178
BmsI GCATC 1 cut(s) 37
BsaAI YACGTR 1 cut(s) 100
BseGI GGATG 2 cut(s) 52, 70
BshFI GGCC 1 cut(s) 11
BsnI GGCC 1 cut(s) 11
Bsp143I GATC 1 cut(s) 31
BspACI CCGC 2 cut(s) 25, 62
BspANI GGCC 1 cut(s) 11
BspMI ACCTGC 1 cut(s) 178
BssMI GATC 1 cut(s) 31
Bst6I CTCTTC 2 cut(s) 78, 141
BstBAI YACGTR 1 cut(s) 100
BstC8I GCNNGC 1 cut(s) 27
BstF5I GGATG 2 cut(s) 52, 70
BstKTI GATC 1 cut(s) 34
BstMBI GATC 1 cut(s) 31
BstSNI TACGTA 1 cut(s) 100
BsuRI GGCC 1 cut(s) 11
BtsCI GGATG 2 cut(s) 52, 70
BveI ACCTGC 1 cut(s) 178
Cac8I GCNNGC 1 cut(s) 27
Csp6I GTAC 1 cut(s) 151
CviAII CATG 1 cut(s) 130
CviJI RGCY 2 cut(s) 11, 29
CviKI_1 RGCY 2 cut(s) 11, 29
CviQI GTAC 1 cut(s) 151
DpnI GATC 1 cut(s) 33
DpnII GATC 1 cut(s) 31
Eam1104I CTCTTC 2 cut(s) 78, 141
EarI CTCTTC 2 cut(s) 78, 141
Eco105I TACGTA 1 cut(s) 100
FaeI CATG 1 cut(s) 133
FaiI YATR 2 cut(s) 131, 142
FatI CATG 1 cut(s) 129
FauI CCCGC 1 cut(s) 18
FbaI TGATCA 1 cut(s) 31
FokI GGATG 2 cut(s) 59, 77
HaeIII GGCC 1 cut(s) 11
Hin1II CATG 1 cut(s) 133
HinfI GANTC 1 cut(s) 133
Hpy188I TCNGA 1 cut(s) 36
HpyAV CCTTC 2 cut(s) 85, 123
HpyCH4IV ACGT 2 cut(s) 99, 153
HpyCH4V TGCA 3 cut(s) 17, 50, 180
HpySE526I ACGT 2 cut(s) 99, 153
Hsp92II CATG 1 cut(s) 133
Ksp22I TGATCA 1 cut(s) 31
Kzo9I GATC 1 cut(s) 31
LpnPI CCDG 2 cut(s) 35, 183
LweI GCATC 1 cut(s) 37
MaeII ACGT 2 cut(s) 99, 153
MalI GATC 1 cut(s) 33
MboI GATC 1 cut(s) 31
MboII GAAGA 2 cut(s) 95, 128
MluCI AATT 1 cut(s) 72
MlyI GAGTC 1 cut(s) 127
MnlI CCTC 2 cut(s) 22, 73
MseI TTAA 1 cut(s) 146
MspA1I CMGCKG 1 cut(s) 25
NdeII GATC 1 cut(s) 31
NlaIII CATG 1 cut(s) 133
PleI GAGTC 1 cut(s) 127
PpsI GAGTC 1 cut(s) 127
Ppu21I YACGTR 1 cut(s) 100
RsaI GTAC 1 cut(s) 152
RsaNI GTAC 1 cut(s) 151
SaqAI TTAA 1 cut(s) 146
Sau3AI GATC 1 cut(s) 31
SchI GAGTC 1 cut(s) 127
SetI ASST 4 cut(s) 102, 156, 166, 172
SfaNI GCATC 1 cut(s) 37
SgeI CNNG 6 cut(s) 34, 38, 55, 91, 142, 182
SnaBI TACGTA 1 cut(s) 100
Sse9I AATT 1 cut(s) 72
SsiI CCGC 2 cut(s) 25, 62
TaiI ACGT 2 cut(s) 102, 156
TasI AATT 1 cut(s) 72
Tru1I TTAA 1 cut(s) 146
Tru9I TTAA 1 cut(s) 146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.