MD02G1057500.v1.1

Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
4639749 .. 4645140
5392 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1057500.v1.1.491

Sequence Viewer

Length: 3099 bp
ATGACGCCTGTAATTCCATATTCTATAAGCAATGTCTCGCATATACCTGGAACTGCCTTTACTGCAAGAAAGAACAGTTGTTTAACAAAATTCAGTTTTTCGAGGAAATCTGCAAGACATACTCTATCCCCACAGAGTTTTCTTTTACCTTTTTCGACCTCTATCAAATCTTTTCCATTGTACCACAGCAGGTGCCCTGTGCATCATAAATGTAGAATCCCTGTATCTGCCACAGGAACTGATGTAGCGGTTGAGGAAGCAGACTCACCAGTTGCAGATGCAGCTTCTAGTGAAGCCAAATCCCCTGAGGATAGTCCCAGCCCATCTCAAGATGCTCAACCAAAGCGTACAAAACCTGTTAGGAAAAGTGCGATGCCGCCTGTGAAGAATGAGGAGCTGGTTGTGGGTGCAACTTTTACTGGGAAAGTAAGATCAATCCAGCCATTTGGTGCTTTTATTGATTTTGGAGCTTTCACAGATGGACTCGTACATGTTTCACAATTGAGTGATAGTTACGTTAAGGATGTTGGAAGCGTTGTTTCTGTTGGGCAAGAGGTGAAGGTGACGTTAGTTGAAGCCAATGCGGAGACTGGGCGGATCTCTCTCACTATGCGTGAACGTGACGATGGCAGTAAGCCGCAGCAAAGGAAAGATGCTTCTGCTGGTAGTGATAGGGGTGGACCTGGTAGAAGGAGTGGCCCAAAGAAAGGAGATAGGAAAAATGAGGTGAGAAAAACTACAAAGTTTGAAAAGGGGCAGGACCTAGTGGGCACTGTAAAGAATTTCGGCAGGGCTGGTGCTTTTATATCTCTTCCTGAGGGGGAGGAAGGATTCCTCCCTACATCGGAGGAACCAGACGATGGATTTGCAAATGTCATGGGAGAGACCTCCCTGCAGCTTGGCCAAGAAATAAATGTCCGTGTCCTGCGTACTACAAGAGGACAAGTAACCTTGACAATGAAGAAAGAAGAAGATATTCTAAAGTCGGACTCGCAGGTCAGTCAAGGAGTAATCCACACTGCAACGAACCCATTCGTTCTGGCGTTCCGCCAAAACAAGGATATTGCTTCATTTTTGGATGAAAGAGAGAAAATAGAAAAAGCAGCTAAAGCAATTCCAAGCAGTGAGTCCAGTATTCCTGAAGTGTTGGATGAAAAAGCAAGCAGCGAGGAGGGAACTCTTGGTGTCCCTGCAGCGGTAGATGAAACTGTTGAAAATGGTGGTGCTTCTTCAGGGAACCAGGAAAGCCCAGTTTCTAGTACAATTGAAACACTAGAAACTACAGAACAAACCATAGAAAAAGAAGAGGTGAGTTCTGATATCTTGGCGCCTGAAGGGAGTACATCTACCACGGATGGAGTGGAAAATGCAAGCGCAGATTCTTCTAGTGAAATAGCTAATCACACGTCGGCTTCAGAAATTCCAACAGGCGAAGAGGTTATAGAGCCTCAAGTGGATGATACCGTAGCAAAAGGTGAACTGCAACCACCTACTTCAGAGAGCAAAATTCCTTCTGCTGCACTAACTGAAGAACCAAAAGAAAATGAGGCCACCAAAGTTGTAGAAGACCTAGCTGACAACATTACGGAGGAAGCTCGGATTCGAACATCTGCTGCTGAGAGTGAATTGCCTTCTATCACACAAGTGGAAGATGACAAAGTGGACAGTTCTCCCGAGAAGAATGGCAGTGTTTCTAATTCAAGTGGACAATCTGACAATCCTTCCCCGAAGGAAAGTAAACCTAAAGCTACTATATCACCAGCCCTTGTAAAGCAGCTGCGTGAAGAAACAGGAGCTGGAATGATGGATTGCAAAAATGCTTTGTCAGAGACTGGCGGGGACATTGTTAAAGCTACGGAGTTCCTCAGAAAGAAAGGTTTAGCAAGTGCAGAAAAGAAAGCCAGCAGAGCCACTGCCGAAGGAAGAATAGGTTCATACATTCACGATAGCAGAATAGGTATCTTGCTAGAGGTAAACTGTGAAACAGATTTTGTTTCTCGGGGTGACATTTTCAAGGAGCTGGTTGATGATTTAGCCATGCAAGTGGCTGCATGCCCTCAAGTACAGTACCTTGCTACAGAAGATGTTCCTGAAGAGTTTGTGACCAAGGAAAGAACGATTGAGATGCAGAAAGAAGATCTTTTGTCAAAGCCGGAGCAGATTAGATCAAAGATTGTTGACGGGAGGATAAGGAAGAGGCTTGAGGAGCTGGCATTGCTTGAGCAGCCTTTCATTAAGAATGATAAGGTGGTGGTGAAGGACTTGGTCAAACAAACCATTTCAACCATTGGAGAAAACATAAAAGTGAAGAGGTTTGTGCGCTACAATCTTGGAGAGGGCTTGGAGAAGAAGAGTCAGGATTTTGCTGCTGAAGTGGCTGCCCAAACTGCGGCAAAACCAGTGGCCACGGAAGTAAAAGAGCAGCCTGTTGTAGTGGAAGTCAAGGAAACTGTTGAGAAGGCACCAACTGTAGCCGTCTCTGCCGCTTTGGTTAAACAACTACGCGATGAAACTGGAGCAGGGATGATGGACTGCAAGAAAGCTCTCTCCGAAACTGGAGGGGACCTTGAGAAGGCACAAGAGTACCTGAGGAAGAAGGGTCTTTCTTCTGCTGAAAAGAAATCCAGCAGGCTTGCTGCTGAAGGCAGGATTGGATCCTACATTCATGACGCCCGCATTGGAGTTCTGATTGAAGTAAACTGCGAGACTGACTTTGTTGGTCGAAGTGAAAATTTCAAGGGGTTGGTTGATGATCTAGCAATGCAAGTCGTGGCCTGCCCTCAGGTGCAATATGTATCCATCGAAGACATTCCGGAGAGCATTGTGAACAAGGAAAAAGAGCTTGAGAGGCAGAGGGAGGACCTTCTGTCGAAACCCGAGAACATTAGAGAGAGAATCGTGGAGGGGAGGATCTCAAAGAGGCTTGGGGAGCTGGCTCTTTTAGAGCAAGCTTTCATTAAAGATGACAGTATTTTGGTGAAGGACCTAGTGAAGCAGACTGTTGCTGCTCTCGGTGAGAACATAAAAGTTCGCAGGTTTGTTCGGTTCACTCTCGGGGAGGCAGTTGAGACAGTTGAGGACACAGAAGCTGAAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1033

Amino Acids

111.85

Weight (kDa)

5.03

Isoelectric Point (pI)

49.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S1 PF00575 135 - 205 3.9e-15 S1 RNA binding domain
S1 PF00575 248 - 312 5.7e-06 S1 RNA binding domain
EF_TS PF00889 637 - 779 1.2e-28 Elongation factor TS
EF_TS PF00889 877 - 1020 2.3e-28 Elongation factor TS
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012242)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 180
AasI GACNNNNNNGTC 1 cut(s) 995
Acc36I ACCTGC 3 cut(s) 180, 985, 3024
AccB1I GGYRCC 3 cut(s) 192, 1327, 2461
AccB7I CCANNNNNTGG 1 cut(s) 860
AccII CGCG 1 cut(s) 2505
AccIII TCCGGA 1 cut(s) 2812
AclWI GGATC 4 cut(s) 605, 2649, 2662, 2918
AcoI YGGCCR 2 cut(s) 901, 2403
AcsI RAATTY 5 cut(s) 89, 781, 1419, 1506, 2731
AcuI CTGAAG 9 cut(s) 1161, 1215, 1353, 1398, 1479, 1548, 2112, 2391, 2661
AcyI GRCGYC 3 cut(s) 5, 1328, 2670
AfaI GTAC 9 cut(s) 182, 349, 489, 931, 1261, 1342, 2064, 2069, 2585
AfiI CCNNNNNNNGG 7 cut(s) 707, 844, 860, 1057, 1195, 2389, 2572
AflIII ACRYGT 2 cut(s) 490, 1404
AgsI TTSAA 9 cut(s) 575, 749, 1214, 1268, 1701, 2014, 2283, 2693, 2737
AhdI GACNNNNNGTC 1 cut(s) 2866
AjiI CACGTC 1 cut(s) 1407
AjnI CCWGG 3 cut(s) 46, 682, 1239
AjuI GAANNNNNNNTTGG 2 cut(s) 2634, 2666
AleI CACNNNNGTG 1 cut(s) 1643
Alw26I GTCTC 7 cut(s) 40, 581, 878, 1823, 2482, 2699, 3062
AlwI GGATC 4 cut(s) 605, 2649, 2662, 2918
AlwNI CAGNNNCTG 4 cut(s) 239, 1796, 1832, 3089
Ama87I CYCGRG 4 cut(s) 1673, 1998, 2876, 3053
Aor13HI TCCGGA 1 cut(s) 2812
AoxI GGCC 5 cut(s) 697, 901, 1548, 2403, 2772
ApoI RAATTY 5 cut(s) 89, 781, 1419, 1506, 2731
ArsI GACNNNNNNTTYG 2 cut(s) 848, 880
Asp700I GAANNNNTTC 5 cut(s) 975, 1031, 1930, 2085, 2808
AspLEI GCGC 3 cut(s) 1330, 1376, 2322
AspS9I GGNCC 6 cut(s) 680, 698, 760, 2563, 2860, 2983
AsuII TTCGAA 1 cut(s) 1603
AvaI CYCGRG 4 cut(s) 1673, 1998, 2876, 3053
AvaII GGWCC 5 cut(s) 680, 760, 2563, 2860, 2983
AxyI CCTNAGG 4 cut(s) 306, 816, 2588, 2781
BaeGI GKGCMC 2 cut(s) 197, 773
BaeI ACNNNNGTAYC 2 cut(s) 2567, 2600
BalI TGGCCA 2 cut(s) 903, 2405
BamHI GGATCC 1 cut(s) 2654
BanI GGYRCC 3 cut(s) 192, 1327, 2461
BbsI GAAGAC 2 cut(s) 1572, 2811
BccI CCATC 8 cut(s) 331, 473, 620, 854, 1349, 1798, 2521, 2807
BceAI ACGGC 1 cut(s) 2459
BcgI CGANNNNNNTGC 4 cut(s) 848, 882, 2107, 2141
BciT130I CCWGG 3 cut(s) 48, 684, 1241
BciVI GTATCC 1 cut(s) 2806
BcoDI GTCTC 7 cut(s) 40, 581, 878, 1823, 2482, 2699, 3062
BfaI CTAG 9 cut(s) 288, 764, 1257, 1274, 1386, 1571, 1967, 2756, 2987
BfmI CTRYAG 5 cut(s) 893, 1191, 1281, 2076, 2469
BfoI RGCGCY 1 cut(s) 1331
BfuAI ACCTGC 3 cut(s) 180, 985, 3024
BfuI GTATCC 1 cut(s) 2806
BglII AGATCT 1 cut(s) 2137
Bme1390I CCNGG 3 cut(s) 48, 684, 1241
Bme18I GGWCC 5 cut(s) 680, 760, 2563, 2860, 2983
BmeRI GACNNNNNGTC 1 cut(s) 2866
BmeT110I CYCGRG 4 cut(s) 1673, 1998, 2876, 3053
BmgBI CACGTC 1 cut(s) 1407
BmgT120I GGNCC 6 cut(s) 680, 698, 760, 2563, 2860, 2983
BmiI GGNNCC 7 cut(s) 194, 852, 1238, 1329, 2463, 2564, 2656
BmrFI CCNGG 3 cut(s) 48, 684, 1241
BmrI ACTGGG 3 cut(s) 429, 600, 1244
BmsI GCATC 6 cut(s) 211, 268, 322, 363, 643, 2115
BmuI ACTGGG 3 cut(s) 429, 600, 1244
BpiI GAAGAC 2 cut(s) 1572, 2811
BpmI CTGGAG 2 cut(s) 2535, 2577
Bpu14I TTCGAA 1 cut(s) 1603
BpuEI CTTGAG 7 cut(s) 312, 1434, 2043, 2222, 2240, 2588, 2864
BsaHI GRCGYC 3 cut(s) 5, 1328, 2670
BsaI GGTCTC 1 cut(s) 878
BsaJI CCNNGG 3 cut(s) 1350, 2106, 2406
BsaWI WCCGGW 1 cut(s) 2812
Bsc4I CCNNNNNNNGG 7 cut(s) 707, 844, 860, 1057, 1195, 2389, 2572
Bse1I ACTGG 9 cut(s) 269, 424, 595, 1131, 1250, 1837, 2399, 2518, 2560
Bse21I CCTNAGG 4 cut(s) 306, 816, 2588, 2781
Bse3DI GCAATG 3 cut(s) 37, 2213, 2766
BseAI TCCGGA 1 cut(s) 2812
BseBI CCWGG 3 cut(s) 48, 684, 1241
BseDI CCNNGG 3 cut(s) 1350, 2106, 2406
BseGI GGATG 6 cut(s) 529, 1084, 1156, 1360, 1462, 2529
BseLI CCNNNNNNNGG 7 cut(s) 707, 844, 860, 1057, 1195, 2389, 2572
BseMI GCAATG 3 cut(s) 37, 2213, 2766
BseMII CTCAG 6 cut(s) 297, 807, 1608, 1879, 2579, 2795
BseNI ACTGG 9 cut(s) 269, 424, 595, 1131, 1250, 1837, 2399, 2518, 2560
BseRI GAGGAG 3 cut(s) 407, 1184, 2219
BseSI GKGCMC 2 cut(s) 197, 773
BseYI CCCAGC 1 cut(s) 317
BsgI GTGCAG 2 cut(s) 1503, 1908
Bsh1236I CGCG 1 cut(s) 2505
BshFI GGCC 5 cut(s) 699, 903, 1550, 2405, 2774
BshNI GGYRCC 3 cut(s) 192, 1327, 2461
BsiHKCI CYCGRG 4 cut(s) 1673, 1998, 2876, 3053
BsiSI CCGG 2 cut(s) 2153, 2813
BslFI GGGAC 4 cut(s) 300, 1172, 1853, 2576
BslI CCNNNNNNNGG 7 cut(s) 707, 844, 860, 1057, 1195, 2389, 2572
BsmAI GTCTC 7 cut(s) 40, 581, 878, 1823, 2482, 2699, 3062
BsmBI CGTCTC 1 cut(s) 2482
BsmFI GGGAC 4 cut(s) 300, 1172, 1853, 2576
BsnI GGCC 5 cut(s) 699, 903, 1550, 2405, 2774
Bso31I GGTCTC 1 cut(s) 878
BsoBI CYCGRG 4 cut(s) 1673, 1998, 2876, 3053
Bsp119I TTCGAA 1 cut(s) 1603
Bsp1286I GDGCHC 2 cut(s) 197, 773
Bsp13I TCCGGA 1 cut(s) 2812
Bsp143I GATC 7 cut(s) 431, 597, 2137, 2165, 2654, 2752, 2910
BspANI GGCC 5 cut(s) 699, 903, 1550, 2405, 2774
BspCNI CTCAG 6 cut(s) 298, 808, 1609, 1878, 2580, 2794
BspEI TCCGGA 1 cut(s) 2812
BspFNI CGCG 1 cut(s) 2505
BspHI TCATGA 1 cut(s) 2665
BspLI GGNNCC 7 cut(s) 194, 852, 1238, 1329, 2463, 2564, 2656
BspMAI CTGCAG 2 cut(s) 897, 1195
BspMI ACCTGC 3 cut(s) 180, 985, 3024
BspPI GGATC 4 cut(s) 605, 2649, 2662, 2918
BspT104I TTCGAA 1 cut(s) 1603
BspT107I GGYRCC 3 cut(s) 192, 1327, 2461
BspTNI GGTCTC 1 cut(s) 878
BsrDI GCAATG 3 cut(s) 37, 2213, 2766
BsrI ACTGG 9 cut(s) 269, 424, 595, 1131, 1250, 1837, 2399, 2518, 2560
BssECI CCNNGG 3 cut(s) 1350, 2106, 2406
BssMI GATC 7 cut(s) 431, 597, 2137, 2165, 2654, 2752, 2910
BssNI GRCGYC 3 cut(s) 5, 1328, 2670
BssT1I CCWWGG 1 cut(s) 2106
Bst2UI CCWGG 3 cut(s) 48, 684, 1241
Bst6I CTCTTC 7 cut(s) 816, 1299, 1428, 2088, 2189, 2303, 2345
BstACI GRCGYC 3 cut(s) 5, 1328, 2670
BstBI TTCGAA 1 cut(s) 1603
BstDEI CTNAG 6 cut(s) 306, 816, 1617, 1865, 2588, 2781
BstDSI CCRYGG 2 cut(s) 1350, 2406
BstENI CCTNNNNNAGG 1 cut(s) 2570
BstF5I GGATG 6 cut(s) 529, 1084, 1156, 1360, 1462, 2529
BstFNI CGCG 1 cut(s) 2505
BstH2I RGCGCY 1 cut(s) 1331
BstHHI GCGC 3 cut(s) 1330, 1376, 2322
BstKTI GATC 7 cut(s) 434, 600, 2140, 2168, 2657, 2755, 2913
BstMAI GTCTC 7 cut(s) 40, 581, 878, 1823, 2482, 2699, 3062
BstMBI GATC 7 cut(s) 431, 597, 2137, 2165, 2654, 2752, 2910
BstNI CCWGG 3 cut(s) 48, 684, 1241
BstNSI RCATGY 2 cut(s) 494, 2055
BstSCI CCNGG 3 cut(s) 46, 682, 1239
BstSFI CTRYAG 5 cut(s) 893, 1191, 1281, 2076, 2469
BstSLI GKGCMC 2 cut(s) 197, 773
BstUI CGCG 1 cut(s) 2505
BstV2I GAAGAC 2 cut(s) 1572, 2811
BstX2I RGATCY 4 cut(s) 597, 2137, 2654, 2910
BstXI CCANNNNNNTGG 2 cut(s) 446, 2044
BstYI RGATCY 4 cut(s) 597, 2137, 2654, 2910
Bsu36I CCTNAGG 4 cut(s) 306, 816, 2588, 2781
BsuI GTATCC 1 cut(s) 2806
BsuRI GGCC 5 cut(s) 699, 903, 1550, 2405, 2774
BtgI CCRYGG 2 cut(s) 1350, 2406
BtgZI GCGATG 2 cut(s) 386, 2520
BtrI CACGTC 1 cut(s) 1407
BtsCI GGATG 6 cut(s) 529, 1084, 1156, 1360, 1462, 2529
BtsI GCAGTG 4 cut(s) 1017, 1129, 1693, 1911
BtsIMutI CAGTG 6 cut(s) 771, 1017, 1129, 1693, 1911, 2406
BveI ACCTGC 3 cut(s) 180, 985, 3024
CaiI CAGNNNCTG 4 cut(s) 239, 1796, 1832, 3089
CciI TCATGA 1 cut(s) 2665
CfoI GCGC 3 cut(s) 1330, 1376, 2322
Cfr13I GGNCC 6 cut(s) 680, 698, 760, 2563, 2860, 2983
CseI GACGC 2 cut(s) 13, 2678
CsiI ACCWGGT 1 cut(s) 682
Csp6I GTAC 9 cut(s) 181, 348, 488, 930, 1260, 1341, 2063, 2068, 2584
CspCI CAANNNNNGTGG 4 cut(s) 1540, 1575, 2382, 2417
CviAII CATG 6 cut(s) 491, 877, 2038, 2052, 2666, 3096
CviQI GTAC 9 cut(s) 181, 348, 488, 930, 1260, 1341, 2063, 2068, 2584
DdeI CTNAG 6 cut(s) 306, 816, 1617, 1865, 2588, 2781
DinI GGCGCC 1 cut(s) 1329
DpnI GATC 7 cut(s) 433, 599, 2139, 2167, 2656, 2754, 2912
DpnII GATC 7 cut(s) 431, 597, 2137, 2165, 2654, 2752, 2910
DrdI GACNNNNNNGTC 1 cut(s) 995
DriI GACNNNNNGTC 1 cut(s) 2866
DseDI GACNNNNNNGTC 1 cut(s) 995
EaeI YGGCCR 2 cut(s) 901, 2403
Eam1104I CTCTTC 7 cut(s) 816, 1299, 1428, 2088, 2189, 2303, 2345
Eam1105I GACNNNNNGTC 1 cut(s) 2866
EarI CTCTTC 7 cut(s) 816, 1299, 1428, 2088, 2189, 2303, 2345
EciI GGCGGA 2 cut(s) 610, 1037
Eco130I CCWWGG 1 cut(s) 2106
Eco31I GGTCTC 1 cut(s) 878
Eco32I GATATC 1 cut(s) 1321
Eco47I GGWCC 5 cut(s) 680, 760, 2563, 2860, 2983
Eco57I CTGAAG 9 cut(s) 1161, 1215, 1353, 1398, 1479, 1548, 2112, 2391, 2661
Eco81I CCTNAGG 4 cut(s) 306, 816, 2588, 2781
Eco88I CYCGRG 4 cut(s) 1673, 1998, 2876, 3053
EcoNI CCTNNNNNAGG 1 cut(s) 2570
EcoO109I RGGNCCY 4 cut(s) 760, 2563, 2860, 2983
EcoRII CCWGG 3 cut(s) 46, 682, 1239
EcoRV GATATC 1 cut(s) 1321
EcoT14I CCWWGG 1 cut(s) 2106
EgeI GGCGCC 1 cut(s) 1329
EheI GGCGCC 1 cut(s) 1329
ErhI CCWWGG 1 cut(s) 2106
Esp3I CGTCTC 1 cut(s) 2482
FaeI CATG 6 cut(s) 494, 880, 2041, 2055, 2669, 3099
FalI AAGNNNNNCTT 2 cut(s) 2124, 2156
FaqI GGGAC 4 cut(s) 300, 1172, 1853, 2576
FatI CATG 6 cut(s) 490, 876, 2037, 2051, 2665, 3095
FauI CCCGC 2 cut(s) 1829, 2681
FokI GGATG 6 cut(s) 536, 1091, 1163, 1367, 1469, 2536
FspBI CTAG 9 cut(s) 288, 764, 1257, 1274, 1386, 1571, 1967, 2756, 2987
GlaI GCGC 3 cut(s) 1329, 1375, 2321
GsaI CCCAGC 1 cut(s) 321
GsuI CTGGAG 2 cut(s) 2535, 2577
HaeII RGCGCY 1 cut(s) 1331
HaeIII GGCC 5 cut(s) 699, 903, 1550, 2405, 2774
HapII CCGG 2 cut(s) 2153, 2813
HgaI GACGC 2 cut(s) 13, 2678
HhaI GCGC 3 cut(s) 1330, 1376, 2322
Hin1I GRCGYC 3 cut(s) 5, 1328, 2670
Hin1II CATG 6 cut(s) 494, 880, 2041, 2055, 2669, 3099
Hin6I GCGC 3 cut(s) 1328, 1374, 2320
HinP1I GCGC 3 cut(s) 1328, 1374, 2320
HincII GTYRAC 1 cut(s) 2179
HindII GTYRAC 1 cut(s) 2179
HindIII AAGCTT 1 cut(s) 2949
HpaII CCGG 2 cut(s) 2153, 2813
Hpy188III TCNNGA 9 cut(s) 329, 815, 1139, 1673, 1943, 2090, 2357, 2666, 2813
Hpy99I CGWCG 1 cut(s) 1411
HpyCH4IV ACGT 4 cut(s) 516, 566, 619, 1406
HpyF3I CTNAG 6 cut(s) 306, 816, 1617, 1865, 2588, 2781
HpySE526I ACGT 4 cut(s) 516, 566, 619, 1406
Hsp92I GRCGYC 3 cut(s) 5, 1328, 2670
Hsp92II CATG 6 cut(s) 494, 880, 2041, 2055, 2669, 3099
HspAI GCGC 3 cut(s) 1328, 1374, 2320
KasI GGCGCC 1 cut(s) 1327
Kpn2I TCCGGA 1 cut(s) 2812
Kzo9I GATC 7 cut(s) 431, 597, 2137, 2165, 2654, 2752, 2910
LmnI GCTCC 8 cut(s) 394, 467, 1793, 2017, 2155, 2206, 2516, 2929
LweI GCATC 6 cut(s) 211, 268, 322, 363, 643, 2115
MabI ACCWGGT 1 cut(s) 682
MaeI CTAG 9 cut(s) 288, 764, 1257, 1274, 1386, 1571, 1967, 2756, 2987
MaeII ACGT 4 cut(s) 516, 566, 619, 1406
MaeIII GTNAC 6 cut(s) 512, 562, 620, 946, 2003, 2101
MalI GATC 7 cut(s) 433, 599, 2139, 2167, 2656, 2754, 2912
MboI GATC 7 cut(s) 431, 597, 2137, 2165, 2654, 2752, 2910
MfeI CAATTG 2 cut(s) 500, 1263
MflI RGATCY 4 cut(s) 597, 2137, 2654, 2910
MhlI GDGCHC 2 cut(s) 197, 773
MlsI TGGCCA 2 cut(s) 903, 2405
MluNI TGGCCA 2 cut(s) 903, 2405
Mly113I GGCGCC 1 cut(s) 1328
MlyI GAGTC 5 cut(s) 257, 477, 983, 1136, 2362
MmeI TCCRAC 4 cut(s) 508, 966, 1128, 1448
Mox20I TGGCCA 2 cut(s) 903, 2405
MroI TCCGGA 1 cut(s) 2812
MroXI GAANNNNTTC 5 cut(s) 975, 1031, 1930, 2085, 2808
MscI TGGCCA 2 cut(s) 903, 2405
MseI TTAA 6 cut(s) 83, 519, 1848, 2235, 2493, 2958
MslI CAYNNNNRTG 3 cut(s) 1643, 2042, 2303
Msp20I TGGCCA 2 cut(s) 903, 2405
MspA1I CMGCKG 2 cut(s) 1196, 1777
MspI CCGG 2 cut(s) 2153, 2813
MspR9I CCNGG 3 cut(s) 48, 684, 1241
MunI CAATTG 2 cut(s) 500, 1263
MvaI CCWGG 3 cut(s) 48, 684, 1241
MvnI CGCG 1 cut(s) 2505
NarI GGCGCC 1 cut(s) 1328
NdeII GATC 7 cut(s) 431, 597, 2137, 2165, 2654, 2752, 2910
NlaIII CATG 6 cut(s) 494, 880, 2041, 2055, 2669, 3099
NlaIV GGNNCC 7 cut(s) 194, 852, 1238, 1329, 2463, 2564, 2656
NmuCI GTSAC 4 cut(s) 562, 620, 2003, 2101
NspI RCATGY 2 cut(s) 494, 2055
NspV TTCGAA 1 cut(s) 1603
OliI CACNNNNGTG 1 cut(s) 1643
PaeI GCATGC 1 cut(s) 2055
PagI TCATGA 1 cut(s) 2665
PaqCI CACCTGC 1 cut(s) 180
PciI ACATGT 1 cut(s) 490
PdmI GAANNNNTTC 5 cut(s) 975, 1031, 1930, 2085, 2808
PfeI GAWTC 5 cut(s) 216, 831, 1379, 1600, 2895
PflFI GACNNNGTC 1 cut(s) 2264
PflMI CCANNNNNTGG 1 cut(s) 860
PleI GAGTC 5 cut(s) 257, 477, 983, 1135, 2361
PluTI GGCGCC 1 cut(s) 1331
PpsI GAGTC 5 cut(s) 257, 477, 983, 1135, 2361
PpuMI RGGWCCY 4 cut(s) 760, 2563, 2860, 2983
PscI ACATGT 1 cut(s) 490
Psp5II RGGWCCY 4 cut(s) 760, 2563, 2860, 2983
Psp6I CCWGG 3 cut(s) 46, 682, 1239
PspFI CCCAGC 1 cut(s) 317
PspGI CCWGG 3 cut(s) 46, 682, 1239
PspN4I GGNNCC 7 cut(s) 194, 852, 1238, 1329, 2463, 2564, 2656
PspPI GGNCC 6 cut(s) 680, 698, 760, 2563, 2860, 2983
PspPPI RGGWCCY 4 cut(s) 760, 2563, 2860, 2983
PsrI GAACNNNNNNTAC 2 cut(s) 43, 75
PstI CTGCAG 2 cut(s) 897, 1195
PstNI CAGNNNCTG 4 cut(s) 239, 1796, 1832, 3089
PsuI RGATCY 4 cut(s) 597, 2137, 2654, 2910
PsyI GACNNNGTC 1 cut(s) 2264
PvuII CAGCTG 1 cut(s) 1777
RsaI GTAC 9 cut(s) 182, 349, 489, 931, 1261, 1342, 2064, 2069, 2585
RsaNI GTAC 9 cut(s) 181, 348, 488, 930, 1260, 1341, 2063, 2068, 2584
RseI CAYNNNNRTG 3 cut(s) 1643, 2042, 2303
SaqAI TTAA 6 cut(s) 83, 519, 1848, 2235, 2493, 2958
Sau3AI GATC 7 cut(s) 431, 597, 2137, 2165, 2654, 2752, 2910
Sau96I GGNCC 6 cut(s) 680, 698, 760, 2563, 2860, 2983
SchI GAGTC 5 cut(s) 257, 477, 983, 1136, 2362
ScrFI CCNGG 3 cut(s) 48, 684, 1241
SduI GDGCHC 2 cut(s) 197, 773
SexAI ACCWGGT 1 cut(s) 682
SfaNI GCATC 6 cut(s) 211, 268, 322, 363, 643, 2115
SfcI CTRYAG 5 cut(s) 893, 1191, 1281, 2076, 2469
SfoI GGCGCC 1 cut(s) 1329
SfuI TTCGAA 1 cut(s) 1603
SinI GGWCC 5 cut(s) 680, 760, 2563, 2860, 2983
SmiMI CAYNNNNRTG 3 cut(s) 1643, 2042, 2303
SmlI CTYRAG 7 cut(s) 327, 1449, 2058, 2201, 2219, 2567, 2843
SmoI CTYRAG 7 cut(s) 327, 1449, 2058, 2201, 2219, 2567, 2843
SphI GCATGC 1 cut(s) 2055
SspDI GGCGCC 1 cut(s) 1327
SspMI CTAG 9 cut(s) 288, 764, 1257, 1274, 1386, 1571, 1967, 2756, 2987
StyD4I CCNGG 3 cut(s) 46, 682, 1239
StyI CCWWGG 1 cut(s) 2106
TaiI ACGT 4 cut(s) 519, 569, 622, 1409
TaqI TCGA 6 cut(s) 101, 155, 1603, 2722, 2802, 2870
TatI WGTACW 3 cut(s) 1259, 1340, 2062
TauI GCSGC 4 cut(s) 379, 640, 2393, 2486
TfiI GAWTC 5 cut(s) 216, 831, 1379, 1600, 2895
Tru1I TTAA 6 cut(s) 83, 519, 1848, 2235, 2493, 2958
Tru9I TTAA 6 cut(s) 83, 519, 1848, 2235, 2493, 2958
TscAI CASTG 6 cut(s) 778, 1024, 1129, 1693, 1918, 2406
TseFI GTSAC 4 cut(s) 562, 620, 2003, 2101
Tsp45I GTSAC 4 cut(s) 562, 620, 2003, 2101
TspGWI ACGGA 5 cut(s) 908, 1367, 1601, 1871, 2423
TspRI CASTG 6 cut(s) 778, 1024, 1129, 1693, 1918, 2406
Tth111I GACNNNGTC 1 cut(s) 2264
Van91I CCANNNNNTGG 1 cut(s) 860
VpaK11BI GGWCC 5 cut(s) 680, 760, 2563, 2860, 2983
XagI CCTNNNNNAGG 1 cut(s) 2570
XapI RAATTY 5 cut(s) 89, 781, 1419, 1506, 2731
XceI RCATGY 2 cut(s) 494, 2055
XcmI CCANNNNNNNNNTGG 1 cut(s) 1357
XmnI GAANNNNTTC 5 cut(s) 975, 1031, 1930, 2085, 2808
XspI CTAG 9 cut(s) 288, 764, 1257, 1274, 1386, 1571, 1967, 2756, 2987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.