Rh2DG060500

Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
4451674 .. 4457384
5711 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG060500.1

Sequence Viewer

Length: 2481 bp
ATGACGCCTGTAGTTCCATATTCTATAAGCAATGTCTCAGTATTTCCTGGAACTGCCTTTTCCTCAAGAAAGACCAATTCTTTAACCAAATTCAATTTTTCTAGGAAATCCGCTAGACATACTCTATCCCCCCACAGTTTTCTTTTACCTTTTTCGACCTCTATTAGATTGTTTCCATTATACAACAACAAATGCCCTGTATATCATAGATCTAGAACCTATGTAGTATCTGCCACAGGGACTGACGTAGCAGTGGAGCAACCAGACTCACCCGTTGCAGAAGCTTCAACTGAAGCTTTGGATAAATCCTCCGATGCAGCTGAAACTGTTGAAAAATCCTCCAACTCTGACGCAAGTTCCAGTCCATCTCAGGCAAGGCGTGCAAGAACTAGTAGGCAAAGTGAGATGTCACCTGTTAAGAATGAGGAGCTGGTTCCTGGCGCAACTTTTACAGGGAAAGTGAGATCCATCCAGCCATTTGGTGCTTTCATTGATTTTGGAGCTTTCACAGATGGCCTGGTACATGTTTCACAGCTGAGTGATACTTATGTAAAAGATGTAGGAAGTGTTGTTTCTGTTGGGCAAGAGGTGAAGGTGACATTAGTTGAAGCCAATATGGAGACTAAGCGGATATCTCTCAGTATGCGTGAAGGCAAAGATGCTTCCAGTAGTGATAGGGGTGGATCTGATAGGAGAGGTGGTCCAAAGAAAGGAGAGAGGAAAAACGAGGGGAGAAAAAGTTCTAAGTTTGCTAAGGGGCAGGACTTAGTGGGCACGGTGAAGAATTTGGTGAGGGCTGGTGCTTTTATATCTCTTCCTGAGGGGGAAGAAGGTTTCTTGCCTCAGTCTGAGGAAGCTGATGAAGGATTTGCAAGCATTATGGGGGAGACCTCTATGGAGGTTGGCCAGGAAGTTAATGTCCGTGTGTTGCGTATTAGTAGAGGACAAGTAACCTTGACAATGAAGAAAGAAGAAGATATTCAGAAGTCAGAGTCCCAGATCACTCAAGGAGTCATCCACACAGCAACAAACCCATTTCTCCTGGCTTTTCGCCAGAACAAGGATATTGCTGCATTTTTGGACGAAAGAGAGAAAGTAGAGAAAGCAACTAAAGAAACTGTAAATCCAAAGAGTACAGAAGAATCAACACAGAAAGTTAATGAAACTGAGAATGAGTCCAATATTCATGAAGTGCTGGACAAACAAGTAAGTAGCGATGAGCAAAGTCTTGGTGTCTCTTCTGCCATGGACGAAAGTATTGAAAATGATGGTGCTCCTTTAGAGGTGGTTGATGTGGGAGCCAGTGGAATAGATGATACGTCAAGCAAAGAAGACCAGGAAACCATCGTTTCTAGTTCAACAGAAACTCTAGAAACTATAGATGGTGCAGTCCAAGACATACAAAAAGAAGAGATGAGTTCCGAAATCTTGGTTCCTGAAGAAAGTATATCTACCACAGATTCTACAATTCGGGAGTCTCCGTCAACTGATGGTGTGGAAAATGATTCAAATCCAGATTCGTTTAGTGAAATAGCTAATCAAGCATTGCCATCAGATATTACAGCAACTGAAGAGGTTATAGAGAGTAAAGTAGATGACACAGTAGCAAAAGATCCACCTCAAATAGAACCACCTACTTCAGAGAGTGAAAGTCCTTCAGCTCCATTAACTGAAGATGAGGAAGTGCAACCAGCTCCTAATACAAGTGGGAGTATCACCAGCTCAGATGTACAACCAGATCTTGCTTCTCCTCAAGGGACAAAAGCAACTGTATCACCAGCTCTTGTAAAACAGCTCCGTGAAGAGTCAGGAGCTGGAATGATGGACTGCAAAAAGGCTTTGTTAGAGTCCGGAGGAGACATTGTCAAAGCCCAGGAGTTCCTTAGAAAGAAAGGCTTAGCAAGTGCAGACAAGAAAGCCAGCAGGGCCACTGCTGAAGGGAGAATAGGTTCATACATTCACGATAGCAGGATTGGTATCTTGCTGGAGGTAAACTGCGAGACAGATTTTGTTTCCCGGGGTGACATTTTCAAGGAGCTGGTTGATGATCTAGCTATGCAAGCAGCTGCATGCCCTCAAGTACAGTATGTTACTACAGAAGACGTTCCTGAAGAGTTTATAAACAAGGAAAGAGAGATTGAGATGCAGAAAGAAGATCTTTTGTCAAAGCCAGAGCAGATTAGATCAAAGATTGTTGACGGGAGGATCAGGAAGAGGCTCGAGGAGCTGGCATTGCTTGAGCAGCCCTACATCAAGAATGATAAGGTGGTGGTGAAGGACTGGGTGAAGCAAACCATTGCAACCATTGGGGAAAACATAAAAGTAAAGAGGTTTGTGCGTTTCAATCTGGGAGAAGGCTTGGAAAAACGGAGTCAGGATTTTGCAGCTGAAGTGGCTGCTCAAACTGCAGCAAAAAAGGTGCCCACAGCAGGGAAAGAACAGCCTGCTGCAGTTGAAGCAAAGGAAACAGTTCAGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

826

Amino Acids

89.71

Weight (kDa)

4.82

Isoelectric Point (pI)

53.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S1_RRP5 PF23459 145 - 214 4.4e-07 RRP5 S1 domain
S1 PF00575 146 - 216 3.2e-16 S1 RNA binding domain
S1 PF00575 249 - 314 4.6e-07 S1 RNA binding domain
EF_TS PF00889 643 - 785 1.2e-28 Elongation factor TS
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012242)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2120
AccB1I GGYRCC 1 cut(s) 2419
AccIII TCCGGA 1 cut(s) 1850
AciI CCGC 2 cut(s) 111, 628
AclWI GGATC 4 cut(s) 459, 691, 1607, 2213
AcoI YGGCCR 1 cut(s) 904
AcsI RAATTY 2 cut(s) 89, 784
AcuI CTGAAG 9 cut(s) 312, 1458, 1590, 1623, 1641, 1692, 1956, 2130, 2409
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 4 cut(s) 522, 1135, 1731, 2082
AfiI CCNNNNNNNGG 4 cut(s) 710, 1060, 2429, 2430
AflIII ACRYGT 1 cut(s) 523
AhlI ACTAGT 1 cut(s) 389
AjnI CCWGG 7 cut(s) 46, 436, 516, 906, 1041, 1335, 1872
AloI GAACNNNNNNTCC 4 cut(s) 724, 756, 1933, 1965
Alw21I GWGCWC 1 cut(s) 1276
Alw26I GTCTC 7 cut(s) 40, 614, 881, 1240, 1482, 1851, 1994
AlwI GGATC 4 cut(s) 459, 691, 1607, 2213
AlwNI CAGNNNCTG 3 cut(s) 242, 1568, 1814
Ama87I CYCGRG 2 cut(s) 2016, 2219
Aor13HI TCCGGA 1 cut(s) 1850
AoxI GGCC 3 cut(s) 514, 904, 1926
ApeKI GCWGC 9 cut(s) 317, 1070, 2063, 2066, 2242, 2384, 2396, 2408, 2447
ApoI RAATTY 2 cut(s) 89, 784
Asp700I GAANNNNTTC 5 cut(s) 739, 978, 1948, 2103, 2469
AspLEI GCGC 1 cut(s) 443
AspS9I GGNCC 2 cut(s) 701, 1926
AsuC2I CCSGG 2 cut(s) 2017, 2018
AvaI CYCGRG 2 cut(s) 2016, 2219
AvaII GGWCC 1 cut(s) 701
AxyI CCTNAGG 1 cut(s) 819
BaeGI GKGCMC 2 cut(s) 776, 2424
BaeI ACNNNNGTAYC 2 cut(s) 534, 567
BalI TGGCCA 1 cut(s) 906
BanI GGYRCC 1 cut(s) 2419
BbsI GAAGAC 2 cut(s) 1338, 2106
Bbv12I GWGCWC 1 cut(s) 1276
BbvI GCAGC 9 cut(s) 329, 1057, 2053, 2075, 2254, 2383, 2396, 2420, 2434
BccI CCATC 9 cut(s) 373, 476, 506, 1262, 1352, 1376, 1484, 1558, 1816
BciT130I CCWGG 7 cut(s) 48, 438, 518, 908, 1043, 1337, 1874
BcnI CCSGG 2 cut(s) 2017, 2018
BcoDI GTCTC 7 cut(s) 40, 614, 881, 1240, 1482, 1851, 1994
BcuI ACTAGT 1 cut(s) 389
BfaI CTAG 7 cut(s) 102, 114, 213, 390, 1353, 1370, 2051
BfmI CTRYAG 5 cut(s) 9, 1377, 2094, 2406, 2448
BglI GCCNNNNNGGC 1 cut(s) 1925
BglII AGATCT 3 cut(s) 209, 1738, 2155
BisI GCNGC 9 cut(s) 318, 1071, 2064, 2067, 2243, 2385, 2397, 2409, 2448
BlpI GCTNAGC 1 cut(s) 1897
BlsI GCNGC 9 cut(s) 319, 1072, 2065, 2068, 2244, 2386, 2398, 2410, 2449
Bme1390I CCNGG 9 cut(s) 48, 438, 518, 908, 1043, 1337, 1874, 2017, 2018
Bme18I GGWCC 1 cut(s) 701
BmeT110I CYCGRG 2 cut(s) 2016, 2219
BmgT120I GGNCC 2 cut(s) 701, 1926
BmiI GGNNCC 4 cut(s) 435, 1300, 1434, 2421
BmrFI CCNGG 9 cut(s) 48, 438, 518, 908, 1043, 1337, 1874, 2017, 2018
BmrI ACTGGG 1 cut(s) 2290
BmsI GCATC 3 cut(s) 304, 649, 2133
BmuI ACTGGG 1 cut(s) 2290
BpiI GAAGAC 2 cut(s) 1338, 2106
BpmI CTGGAG 1 cut(s) 2006
Bpu10I CCTNAGC 1 cut(s) 753
Bpu1102I GCTNAGC 1 cut(s) 1897
BpuEI CTTGAG 5 cut(s) 49, 990, 1737, 2061, 2258
BpuMI CCSGG 2 cut(s) 2017, 2018
BsaBI GATNNNNATC 2 cut(s) 1509, 1976
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 881
BsaJI CCNNGG 4 cut(s) 1245, 1872, 2016, 2017
BsaWI WCCGGW 1 cut(s) 1850
Bsc4I CCNNNNNNNGG 4 cut(s) 710, 1060, 2429, 2430
Bse1I ACTGG 4 cut(s) 360, 666, 1302, 2285
Bse21I CCTNAGG 1 cut(s) 819
Bse3DI GCAATG 4 cut(s) 37, 1544, 2231, 2295
Bse8I GATNNNNATC 2 cut(s) 1509, 1976
BseAI TCCGGA 1 cut(s) 1850
BseBI CCWGG 7 cut(s) 48, 438, 518, 908, 1043, 1337, 1874
BseDI CCNNGG 4 cut(s) 1245, 1872, 2016, 2017
BseGI GGATG 2 cut(s) 468, 1014
BseJI GATNNNNATC 2 cut(s) 1509, 1976
BseLI CCNNNNNNNGG 4 cut(s) 710, 1060, 2429, 2430
BseMI GCAATG 4 cut(s) 37, 1544, 2231, 2295
BseMII CTCAG 9 cut(s) 51, 383, 527, 652, 810, 840, 857, 1158, 1737
BseNI ACTGG 4 cut(s) 360, 666, 1302, 2285
BseRI GAGGAG 4 cut(s) 440, 1740, 1869, 2237
BseSI GKGCMC 2 cut(s) 776, 2424
BseXI GCAGC 9 cut(s) 329, 1057, 2053, 2075, 2254, 2383, 2396, 2420, 2434
BsgI GTGCAG 2 cut(s) 1407, 1926
BshFI GGCC 3 cut(s) 516, 906, 1928
BshNI GGYRCC 1 cut(s) 2419
BsiHKAI GWGCWC 1 cut(s) 1276
BsiHKCI CYCGRG 2 cut(s) 2016, 2219
BsiSI CCGG 2 cut(s) 1851, 2017
BslFI GGGAC 3 cut(s) 253, 979, 1771
BslI CCNNNNNNNGG 4 cut(s) 710, 1060, 2429, 2430
BsmAI GTCTC 7 cut(s) 40, 614, 881, 1240, 1482, 1851, 1994
BsmFI GGGAC 3 cut(s) 253, 979, 1771
BsnI GGCC 3 cut(s) 516, 906, 1928
Bso31I GGTCTC 1 cut(s) 881
BsoBI CYCGRG 2 cut(s) 2016, 2219
Bsp1286I GDGCHC 3 cut(s) 776, 1276, 2424
Bsp13I TCCGGA 1 cut(s) 1850
Bsp1407I TGTACA 1 cut(s) 1729
Bsp1720I GCTNAGC 1 cut(s) 1897
Bsp19I CCATGG 1 cut(s) 1245
BspACI CCGC 2 cut(s) 111, 628
BspANI GGCC 3 cut(s) 516, 906, 1928
BspCNI CTCAG 9 cut(s) 50, 382, 528, 651, 811, 841, 856, 1159, 1736
BspEI TCCGGA 1 cut(s) 1850
BspHI TCATGA 1 cut(s) 1186
BspLI GGNNCC 4 cut(s) 435, 1300, 1434, 2421
BspMAI CTGCAG 2 cut(s) 2410, 2452
BspPI GGATC 4 cut(s) 459, 691, 1607, 2213
BspT107I GGYRCC 1 cut(s) 2419
BspTNI GGTCTC 1 cut(s) 881
BsrDI GCAATG 4 cut(s) 37, 1544, 2231, 2295
BsrGI TGTACA 1 cut(s) 1729
BsrI ACTGG 4 cut(s) 360, 666, 1302, 2285
BssECI CCNNGG 4 cut(s) 1245, 1872, 2016, 2017
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 1245
Bst2UI CCWGG 7 cut(s) 48, 438, 518, 908, 1043, 1337, 1874
Bst4CI ACNGT 8 cut(s) 137, 328, 778, 1120, 1603, 1771, 2085, 2470
Bst6I CTCTTC 7 cut(s) 819, 1243, 1404, 1566, 1797, 2106, 2207
BstACI GRCGYC 1 cut(s) 5
BstAPI GCANNNNNTGC 1 cut(s) 380
BstAUI TGTACA 1 cut(s) 1729
BstC8I GCNNGC 7 cut(s) 381, 874, 1921, 2061, 2071, 2229, 2445
BstDSI CCRYGG 1 cut(s) 1245
BstF5I GGATG 2 cut(s) 468, 1014
BstHHI GCGC 1 cut(s) 443
BstMAI GTCTC 7 cut(s) 40, 614, 881, 1240, 1482, 1851, 1994
BstNI CCWGG 7 cut(s) 48, 438, 518, 908, 1043, 1337, 1874
BstNSI RCATGY 2 cut(s) 527, 2073
BstSCI CCNGG 9 cut(s) 46, 436, 516, 906, 1041, 1335, 1872, 2015, 2016
BstSFI CTRYAG 5 cut(s) 9, 1377, 2094, 2406, 2448
BstSLI GKGCMC 2 cut(s) 776, 2424
BstV1I GCAGC 9 cut(s) 329, 1057, 2053, 2075, 2254, 2383, 2396, 2420, 2434
BstV2I GAAGAC 2 cut(s) 1338, 2106
BstX2I RGATCY 6 cut(s) 209, 464, 683, 1612, 1738, 2155
BstXI CCANNNNNNTGG 1 cut(s) 479
BstYI RGATCY 6 cut(s) 209, 464, 683, 1612, 1738, 2155
Bsu36I CCTNAGG 1 cut(s) 819
BsuRI GGCC 3 cut(s) 516, 906, 1928
BtgI CCRYGG 1 cut(s) 1245
BtgZI GCGATG 1 cut(s) 1230
BtsCI GGATG 2 cut(s) 468, 1014
BtsI GCAGTG 2 cut(s) 258, 1929
BtsIMutI CAGTG 3 cut(s) 258, 1309, 1929
Cac8I GCNNGC 7 cut(s) 381, 874, 1921, 2061, 2071, 2229, 2445
CaiI CAGNNNCTG 3 cut(s) 242, 1568, 1814
CciI TCATGA 1 cut(s) 1186
CfoI GCGC 1 cut(s) 443
Cfr13I GGNCC 2 cut(s) 701, 1926
Cfr9I CCCGGG 1 cut(s) 2016
CseI GACGC 2 cut(s) 13, 359
Csp6I GTAC 4 cut(s) 521, 1134, 1730, 2081
CviAII CATG 4 cut(s) 524, 1187, 1246, 2070
CviQI GTAC 4 cut(s) 521, 1134, 1730, 2081
EaeI YGGCCR 1 cut(s) 904
Eam1104I CTCTTC 7 cut(s) 819, 1243, 1404, 1566, 1797, 2106, 2207
EarI CTCTTC 7 cut(s) 819, 1243, 1404, 1566, 1797, 2106, 2207
Eco130I CCWWGG 1 cut(s) 1245
Eco31I GGTCTC 1 cut(s) 881
Eco32I GATATC 1 cut(s) 633
Eco47I GGWCC 1 cut(s) 701
Eco57I CTGAAG 9 cut(s) 312, 1458, 1590, 1623, 1641, 1692, 1956, 2130, 2409
Eco81I CCTNAGG 1 cut(s) 819
Eco88I CYCGRG 2 cut(s) 2016, 2219
EcoRII CCWGG 7 cut(s) 46, 436, 516, 906, 1041, 1335, 1872
EcoRV GATATC 1 cut(s) 633
EcoT14I CCWWGG 1 cut(s) 1245
ErhI CCWWGG 1 cut(s) 1245
FaeI CATG 4 cut(s) 527, 1190, 1249, 2073
FalI AAGNNNNNCTT 4 cut(s) 1880, 1912, 2142, 2174
FaqI GGGAC 3 cut(s) 253, 979, 1771
FatI CATG 4 cut(s) 523, 1186, 1245, 2069
Fnu4HI GCNGC 9 cut(s) 318, 1071, 2064, 2067, 2243, 2385, 2397, 2409, 2448
FokI GGATG 2 cut(s) 455, 1001
Fsp4HI GCNGC 9 cut(s) 318, 1071, 2064, 2067, 2243, 2385, 2397, 2409, 2448
FspBI CTAG 7 cut(s) 102, 114, 213, 390, 1353, 1370, 2051
GlaI GCGC 1 cut(s) 442
GluI GCNGC 9 cut(s) 318, 1071, 2064, 2067, 2243, 2385, 2397, 2409, 2448
GsuI CTGGAG 1 cut(s) 2006
HaeIII GGCC 3 cut(s) 516, 906, 1928
HapII CCGG 2 cut(s) 1851, 2017
HgaI GACGC 2 cut(s) 13, 359
HhaI GCGC 1 cut(s) 443
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 4 cut(s) 527, 1190, 1249, 2073
Hin6I GCGC 1 cut(s) 441
HinP1I GCGC 1 cut(s) 441
HincII GTYRAC 2 cut(s) 1485, 2197
HindII GTYRAC 2 cut(s) 1485, 2197
HindIII AAGCTT 2 cut(s) 282, 294
HpaII CCGG 2 cut(s) 1851, 2017
Hpy166II GTNNAC 3 cut(s) 1485, 1993, 2197
Hpy8I GTNNAC 3 cut(s) 1485, 1993, 2197
HpyAV CCTTC 8 cut(s) 586, 644, 824, 857, 1665, 1931, 2269, 2348
HpyCH4III ACNGT 8 cut(s) 137, 328, 778, 1120, 1603, 1771, 2085, 2470
HpyCH4IV ACGT 3 cut(s) 246, 1319, 2103
HpySE526I ACGT 3 cut(s) 246, 1319, 2103
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 4 cut(s) 527, 1190, 1249, 2073
HspAI GCGC 1 cut(s) 441
Kpn2I TCCGGA 1 cut(s) 1850
Lsp1109I GCAGC 9 cut(s) 329, 1057, 2053, 2075, 2254, 2383, 2396, 2420, 2434
LweI GCATC 3 cut(s) 304, 649, 2133
MaeI CTAG 7 cut(s) 102, 114, 213, 390, 1353, 1370, 2051
MaeII ACGT 3 cut(s) 246, 1319, 2103
MaeIII GTNAC 5 cut(s) 408, 595, 949, 2021, 2089
MflI RGATCY 6 cut(s) 209, 464, 683, 1612, 1738, 2155
MhlI GDGCHC 3 cut(s) 776, 1276, 2424
MlsI TGGCCA 1 cut(s) 906
MluCI AATT 5 cut(s) 76, 89, 94, 784, 1467
MluNI TGGCCA 1 cut(s) 906
MlyI GAGTC 8 cut(s) 260, 1001, 1020, 1184, 1484, 1814, 1856, 2380
MmeI TCCRAC 1 cut(s) 366
Mox20I TGGCCA 1 cut(s) 906
MroI TCCGGA 1 cut(s) 1850
MroXI GAANNNNTTC 5 cut(s) 739, 978, 1948, 2103, 2469
MscI TGGCCA 1 cut(s) 906
MseI TTAA 5 cut(s) 83, 417, 915, 1158, 1667
Msp20I TGGCCA 1 cut(s) 906
MspA1I CMGCKG 4 cut(s) 320, 535, 2066, 2387
MspI CCGG 2 cut(s) 1851, 2017
MspR9I CCNGG 9 cut(s) 48, 438, 518, 908, 1043, 1337, 1874, 2017, 2018
MvaI CCWGG 7 cut(s) 48, 438, 518, 908, 1043, 1337, 1874
NciI CCSGG 2 cut(s) 2017, 2018
NcoI CCATGG 1 cut(s) 1245
NlaIII CATG 4 cut(s) 527, 1190, 1249, 2073
NlaIV GGNNCC 4 cut(s) 435, 1300, 1434, 2421
NmuCI GTSAC 3 cut(s) 408, 595, 2021
NspI RCATGY 2 cut(s) 527, 2073
PaeI GCATGC 1 cut(s) 2073
PaeR7I CTCGAG 1 cut(s) 2219
PagI TCATGA 1 cut(s) 1186
PciI ACATGT 1 cut(s) 523
PdmI GAANNNNTTC 5 cut(s) 739, 978, 1948, 2103, 2469
PfeI GAWTC 4 cut(s) 1142, 1460, 1505, 1517
PflFI GACNNNGTC 1 cut(s) 1862
PfoI TCCNGGA 1 cut(s) 46
PkrI GCNGC 9 cut(s) 319, 1072, 2065, 2068, 2244, 2386, 2398, 2410, 2449
PleI GAGTC 8 cut(s) 260, 1000, 1019, 1183, 1483, 1813, 1855, 2379
PpsI GAGTC 8 cut(s) 260, 1000, 1019, 1183, 1483, 1813, 1855, 2379
PscI ACATGT 1 cut(s) 523
PsiI TTATAA 1 cut(s) 2120
Psp6I CCWGG 7 cut(s) 46, 436, 516, 906, 1041, 1335, 1872
PspGI CCWGG 7 cut(s) 46, 436, 516, 906, 1041, 1335, 1872
PspN4I GGNNCC 4 cut(s) 435, 1300, 1434, 2421
PspPI GGNCC 2 cut(s) 701, 1926
PspXI VCTCGAGB 1 cut(s) 2219
PstI CTGCAG 2 cut(s) 2410, 2452
PstNI CAGNNNCTG 3 cut(s) 242, 1568, 1814
PsuI RGATCY 6 cut(s) 209, 464, 683, 1612, 1738, 2155
PsyI GACNNNGTC 1 cut(s) 1862
PvuII CAGCTG 4 cut(s) 320, 535, 2066, 2387
RsaI GTAC 4 cut(s) 522, 1135, 1731, 2082
RsaNI GTAC 4 cut(s) 521, 1134, 1730, 2081
SaqAI TTAA 5 cut(s) 83, 417, 915, 1158, 1667
SatI GCNGC 9 cut(s) 318, 1071, 2064, 2067, 2243, 2385, 2397, 2409, 2448
Sau96I GGNCC 2 cut(s) 701, 1926
SchI GAGTC 8 cut(s) 260, 1001, 1020, 1184, 1484, 1814, 1856, 2380
ScrFI CCNGG 9 cut(s) 48, 438, 518, 908, 1043, 1337, 1874, 2017, 2018
SduI GDGCHC 3 cut(s) 776, 1276, 2424
SfaNI GCATC 3 cut(s) 304, 649, 2133
SfcI CTRYAG 5 cut(s) 9, 1377, 2094, 2406, 2448
Sfr274I CTCGAG 1 cut(s) 2219
SinI GGWCC 1 cut(s) 701
SlaI CTCGAG 1 cut(s) 2219
SmaI CCCGGG 1 cut(s) 2018
SmlI CTYRAG 6 cut(s) 64, 1005, 1752, 2076, 2219, 2237
SmoI CTYRAG 6 cut(s) 64, 1005, 1752, 2076, 2219, 2237
SpeI ACTAGT 1 cut(s) 389
SphI GCATGC 1 cut(s) 2073
Sse9I AATT 5 cut(s) 76, 89, 94, 784, 1467
SsiI CCGC 2 cut(s) 111, 628
SspI AATATT 1 cut(s) 1183
SspMI CTAG 7 cut(s) 102, 114, 213, 390, 1353, 1370, 2051
StyD4I CCNGG 9 cut(s) 46, 436, 516, 906, 1041, 1335, 1872, 2015, 2016
StyI CCWWGG 1 cut(s) 1245
TaaI ACNGT 8 cut(s) 137, 328, 778, 1120, 1603, 1771, 2085, 2470
TaiI ACGT 3 cut(s) 249, 1322, 2106
TaqI TCGA 2 cut(s) 155, 2220
TasI AATT 5 cut(s) 76, 89, 94, 784, 1467
TatI WGTACW 3 cut(s) 1133, 1729, 2080
TfiI GAWTC 4 cut(s) 1142, 1460, 1505, 1517
Tru1I TTAA 5 cut(s) 83, 417, 915, 1158, 1667
Tru9I TTAA 5 cut(s) 83, 417, 915, 1158, 1667
TscAI CASTG 3 cut(s) 258, 1309, 1936
TseFI GTSAC 3 cut(s) 408, 595, 2021
TseI GCWGC 9 cut(s) 317, 1070, 2063, 2066, 2242, 2384, 2396, 2408, 2447
Tsp45I GTSAC 3 cut(s) 408, 595, 2021
TspDTI ATGAA 7 cut(s) 478, 876, 977, 1175, 1176, 1203, 1941
TspGWI ACGGA 4 cut(s) 911, 1470, 1787, 2383
TspMI CCCGGG 1 cut(s) 2016
TspRI CASTG 3 cut(s) 258, 1309, 1936
Tth111I GACNNNGTC 1 cut(s) 1862
VpaK11BI GGWCC 1 cut(s) 701
XapI RAATTY 2 cut(s) 89, 784
XbaI TCTAGA 2 cut(s) 212, 1369
XceI RCATGY 2 cut(s) 527, 2073
XhoI CTCGAG 1 cut(s) 2219
XmaI CCCGGG 1 cut(s) 2016
XmnI GAANNNNTTC 5 cut(s) 739, 978, 1948, 2103, 2469
XspI CTAG 7 cut(s) 102, 114, 213, 390, 1353, 1370, 2051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.