Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0015099

Physical Location & Seq

Genomic Coordinates Reverse (-)

7541986 .. 7545340

Gene Structure 3355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1095500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1995 bp

ATGGCCGCTGTTCCCTCGTTCCTCTTCCTCCTCATCTTCCTCTCTTCCTCCCCTCACCTCTCCCTCTCCTTGTCACAAGAACAAGATGCTCTCTTGAAGCTCAAGAGATCTCTCTCTCCAGCAGATAATCCGTTGGACAACTGGGACCCAAACACCTCCCCATGTAACGACAAATGGGCTGGGATTGTCTGCAACGAAGATGTCATCACCGGTCTCCATTTCGCCAACATGGGTCTCTCCGGAAATTTTGACGTTGATGCATTAAAAGACATTCCTACCCTCAGAACCATTAATCTCATGAACAACAAATTCTCAGGTCCAATTCCAGATTTCCACAAGCTTGGTGTCTTGAAATCCTTGTTTTTGGCGGGAAACGACTTCTCCGGCGAAATCCCAAAAGACTACTTTTCCCATTTGACGTCGTTGAAGAAAATTTACCTTAACGGTAACAATTTCACAGGAAAAATCCCAGAGTCATTGACCCAATTGACCAAGCTAGAAGAACTTCATTTGGAGAGCAACCAATTCACAGGCCCTATACCAAAATTAAAGCCAGGAGTATTGAACTCCCTTGACTTTTCAAACAACAAGTTACAAGGTCCTATCCCGGAAACCCTGTCGAAATTTGACCCCAAGGCGTTCGATGGAAACGAAGGACTATGTGGCGGGCCACTCAAGTCATCATGCAAGCCGCCTCCAACACCGTCATCTCCTCCGCCAAAATCCCCATCAAAGTCTCCGCCAGAATCCCCATCAACATCGCCGCCCTCAACTCCAAAGAAGAAAGAGGAAGATAGAAAATCAAAAACCATCATCATAGTCATCAGCGTCATTGTCGGTATCATGGTTCTGCTCCTGCTTTTCGTGCTGCTCACGAAGAAGAGGCGAAAACGGGAGGACAACTTCAACGTGCTCGGCAAGGAACAGATCGTGGATGACCATCGTAATGTACAGGAGAAGGTGGTTGAAGTTCATATTCCAAGCACCACAAATCGCAGCGTGGGAAGTACAAATGAGTCGAATCGTAGCGTGGAGGTCAACCAAAGCAATAGCAGAAAAGGTAGCGGGGACTCGAAAAAGGGGTCGAGTCAGGGGAAAAACAGCATGAACGAGCTTTTGATGGTGAACGAGGAAAAGGGTACATTTGGATTGCCGGATTTGATGAAGGCGGCAGCAGAGGTTTTGGGGAATGGAGGGTTGGGATCAGCTTATAAGGCGGTGATGTCTAATGGGTTTTCTGTTGTGGTGAAGAGGATGAGGGAGATGAATAGGTTGGGGAGAGATGGGTTTGATGCTGAAATGAGAAGGTTTGGAAGATTAAGCCACAAGAACATCTTGACTCCTTTGGCTTACCATTATAGGAGAGAGGAGAAGCTGTTGATCTCAGAATACATTCCTAAGGGCAGCTTGCTATACGTTTTGCATGGTGATCGTGGAATTTCTTATTCGGAGCTGAACTGGCCTACCCGTCTGAAGATTGTCCAAGGAATTGCATGTGGAATGGGATTCATCCACACAGAGTTTGCATCCTATGACCTGCCCCATGGAAACCTAAAGTCCAGCAACATTCTACTAAAAGAAGACTATGAGCCGGTCCTCAATGACTATGCCTTACATCCTCTCATAAACCCTAGCAATGCTGCACAATCCATGTTTGCTTTTAGGACCCCAGAGTACATAGAATCCCAGCAAGTATCTCCAAAAGCCGATGTATACTGCCTTGGGATTGTGATCCTTGAAATCCTCACCGGGAAGTTTCCATCTCAGTATCTGAGCAACGGGAAAGGCGGAACCGACGTCGTTCAGTGGGTCCAATCAGCCATGGCTGATCAAAGAGAACAAGAGTTGCTAGACCCAGAGATAGCAAGTGAGACAGACTCAGTGGATCAAATGCTGCAGCTTCTGATGGTTGGAGCTGATTGCACTAAGAGTGAGCCTGAGCAAAGGCTTGATTTAAGCGAAGCCATTAGGAGGATTGAAGAGGTACAAGCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009856 GO:0009987 GO:0010183 GO:0010769 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0030054 GO:0030427 GO:0032501 GO:0032502 GO:0035838 GO:0036211 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0042802 GO:0042995 GO:0043170 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044463 GO:0044464 GO:0044706 GO:0045595 GO:0048638 GO:0048856 GO:0048868 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051286 GO:0051510 GO:0051704 GO:0055044 GO:0060284 GO:0065007 GO:0071704 GO:0071944 GO:0080092 GO:0090404 GO:0090406 GO:0120025 GO:0120038 GO:0140096 GO:1901564 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

665

Amino Acids

73.31

Weight (kDa)

6.53

Isoelectric Point (pI)

45.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	25 - 65	7.8e-09	Leucine rich repeat N-terminal domain
LRR_8	PF13855	130 - 176	2e-08	Leucine rich repeat
LRR_4	PF12799	140 - 181	1e-05	Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr	PF07714	392 - 657	1.1e-24	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	393 - 656	7.6e-25	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42880 AT5G20690
fragaria_vesca	FvH4_1g09030
malus_domestica	MD02G1095500.v1.1 MD15G1220000.v1.1
prunus_persica	Prupe.7G195600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0095451
rosa_laevigata	RLG00000016568
rosa_multiflora	Rmu_co8386329.1_g000001
rosa_roxburghii	Rroxscaffold_2G00146330
rosa_rugosa	Rorug02G0051200.1
rosa_samantha	Rh2AG099200 Rh2BG100500 Rh2CG102600 Rh2DG100100
rosa_wichuraiana	Rw2G007510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1212
AatII	GACGTC	2 cut(s)	422, 1800
Acc36I	ACCTGC	1 cut(s)	1545
AccI	GTMKAC	1 cut(s)	1713
AccIII	TCCGGA	1 cut(s)	239
AclWI	GGATC	3 cut(s)	1210, 1726, 1893
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	5 cut(s)	244, 308, 432, 623, 1437
AcuI	CTGAAG	1 cut(s)	1493
AcyI	GRCGYC	2 cut(s)	419, 1797
AfaI	GTAC	5 cut(s)	951, 1009, 1141, 1676, 1986
AfiI	CCNNNNNNNGG	1 cut(s)	1971
AgeI	ACCGGT	1 cut(s)	209
AgsI	TTSAA	9 cut(s)	97, 352, 427, 565, 582, 907, 968, 1739, 1979
AjnI	CCWGG	1 cut(s)	553
AjuI	GAANNNNNNNTTGG	2 cut(s)	1181, 1213
Alw21I	GWGCWC	1 cut(s)	915
Alw26I	GTCTC	4 cut(s)	218, 239, 741, 1865
AlwI	GGATC	3 cut(s)	1210, 1726, 1893
AlwNI	CAGNNNCTG	2 cut(s)	1771, 1903
Aor13HI	TCCGGA	1 cut(s)	239
AoxI	GGCC	4 cut(s)	3, 532, 668, 1460
ApeKI	GCWGC	7 cut(s)	868, 996, 1172, 1404, 1640, 1894, 1897
ApoI	RAATTY	5 cut(s)	244, 308, 432, 623, 1437
ArsI	GACNNNNNNTTYG	2 cut(s)	1067, 1099
AseI	ATTAAT	1 cut(s)	291
AsiGI	ACCGGT	1 cut(s)	209
Asp700I	GAANNNNTTC	2 cut(s)	504, 1392
AspS9I	GGNCC	8 cut(s)	145, 317, 533, 599, 668, 1594, 1665, 1810
AsuC2I	CCSGG	2 cut(s)	608, 1750
AsuHPI	GGTGA	7 cut(s)	47, 199, 1135, 1231, 1258, 1439, 1738
AvaII	GGWCC	6 cut(s)	145, 317, 599, 1594, 1665, 1810
AxyI	CCTNAGG	1 cut(s)	1398
BarI	GAAGNNNNNNTAC	2 cut(s)	419, 451
BbsI	GAAGAC	1 cut(s)	1587
Bbv12I	GWGCWC	1 cut(s)	915
BbvI	GCAGC	7 cut(s)	855, 1008, 1184, 1416, 1627, 1881, 1909
BccI	CCATC	9 cut(s)	638, 736, 760, 818, 948, 1114, 1277, 1768, 1900
BcgI	CGANNNNNNTGC	2 cut(s)	1412, 1446
BciT130I	CCWGG	1 cut(s)	555
BclI	TGATCA	1 cut(s)	1828
BcnI	CCSGG	2 cut(s)	608, 1750
BcoDI	GTCTC	4 cut(s)	218, 239, 741, 1865
BfaI	CTAG	3 cut(s)	497, 1632, 1850
BfmI	CTRYAG	1 cut(s)	1895
BfuAI	ACCTGC	1 cut(s)	1545
BglII	AGATCT	1 cut(s)	107
Bme1390I	CCNGG	3 cut(s)	555, 608, 1750
Bme18I	GGWCC	6 cut(s)	145, 317, 599, 1594, 1665, 1810
BmgT120I	GGNCC	8 cut(s)	145, 317, 533, 599, 668, 1594, 1665, 1810
BmiI	GGNNCC	5 cut(s)	146, 147, 1667, 1792, 1811
BmrFI	CCNGG	3 cut(s)	555, 608, 1750
BmrI	ACTGGG	1 cut(s)	151
BmsI	GCATC	4 cut(s)	76, 247, 1282, 1535
BmuI	ACTGGG	1 cut(s)	151
BpiI	GAAGAC	1 cut(s)	1587
BplI	GAGNNNNNCTC	2 cut(s)	1862, 1894
BpmI	CTGGAG	1 cut(s)	102
Bpu10I	CCTNAGC	1 cut(s)	1938
BpuEI	CTTGAG	2 cut(s)	86, 659
BpuMI	CCSGG	2 cut(s)	608, 1750
BsaBI	GATNNNNATC	2 cut(s)	939, 1730
BsaHI	GRCGYC	2 cut(s)	419, 1797
BsaI	GGTCTC	2 cut(s)	218, 239
BsaJI	CCNNGG	5 cut(s)	633, 1483, 1543, 1720, 1821
BsaWI	WCCGGW	2 cut(s)	209, 239
BsaXI	ACNNNNNCTCC	4 cut(s)	365, 395, 1361, 1391
Bsc4I	CCNNNNNNNGG	1 cut(s)	1971
Bse118I	RCCGGY	2 cut(s)	209, 1591
Bse1I	ACTGG	2 cut(s)	146, 1463
Bse21I	CCTNAGG	1 cut(s)	1398
Bse3DI	GCAATG	1 cut(s)	1642
Bse8I	GATNNNNATC	2 cut(s)	939, 1730
BseAI	TCCGGA	1 cut(s)	239
BseBI	CCWGG	1 cut(s)	555
BseDI	CCNNGG	5 cut(s)	633, 1483, 1543, 1720, 1821
BseGI	GGATG	5 cut(s)	940, 1260, 1509, 1526, 1615
BseJI	GATNNNNATC	2 cut(s)	939, 1730
BseLI	CCNNNNNNNGG	1 cut(s)	1971
BseMI	GCAATG	1 cut(s)	1642
BseMII	CTCAG	7 cut(s)	295, 327, 1398, 1763, 1778, 1893, 1929
BseNI	ACTGG	2 cut(s)	146, 1463
BseRI	GAGGAG	3 cut(s)	20, 702, 1382
BseXI	GCAGC	7 cut(s)	855, 1008, 1184, 1416, 1627, 1881, 1909
BseYI	CCCAGC	2 cut(s)	179, 1686
BsgI	GTGCAG	1 cut(s)	1626
BshFI	GGCC	4 cut(s)	5, 534, 670, 1462
BshTI	ACCGGT	1 cut(s)	209
BsiHKAI	GWGCWC	1 cut(s)	915
BsiSI	CCGG	7 cut(s)	210, 240, 384, 608, 1154, 1592, 1749
BslFI	GGGAC	2 cut(s)	158, 1082
BslI	CCNNNNNNNGG	1 cut(s)	1971
BsmAI	GTCTC	4 cut(s)	218, 239, 741, 1865
BsmFI	GGGAC	2 cut(s)	158, 1082
BsnI	GGCC	4 cut(s)	5, 534, 670, 1462
Bso31I	GGTCTC	2 cut(s)	218, 239
Bsp1286I	GDGCHC	1 cut(s)	915
Bsp13I	TCCGGA	1 cut(s)	239
Bsp1407I	TGTACA	1 cut(s)	949
Bsp143I	GATC	8 cut(s)	107, 927, 1202, 1380, 1429, 1731, 1828, 1885
Bsp19I	CCATGG	2 cut(s)	1543, 1821
BspANI	GGCC	4 cut(s)	5, 534, 670, 1462
BspCNI	CTCAG	7 cut(s)	294, 326, 1397, 1764, 1777, 1892, 1930
BspEI	TCCGGA	1 cut(s)	239
BspHI	TCATGA	1 cut(s)	297
BspLI	GGNNCC	5 cut(s)	146, 147, 1667, 1792, 1811
BspMAI	CTGCAG	1 cut(s)	1899
BspMI	ACCTGC	1 cut(s)	1545
BspPI	GGATC	3 cut(s)	1210, 1726, 1893
BspTNI	GGTCTC	2 cut(s)	218, 239
BsrDI	GCAATG	1 cut(s)	1642
BsrFI	RCCGGY	2 cut(s)	209, 1591
BsrGI	TGTACA	1 cut(s)	949
BsrI	ACTGG	2 cut(s)	146, 1463
BssAI	RCCGGY	2 cut(s)	209, 1591
BssECI	CCNNGG	5 cut(s)	633, 1483, 1543, 1720, 1821
BssMI	GATC	8 cut(s)	107, 927, 1202, 1380, 1429, 1731, 1828, 1885
BssNAI	GTATAC	1 cut(s)	1714
BssNI	GRCGYC	2 cut(s)	419, 1797
BssT1I	CCWWGG	5 cut(s)	633, 1483, 1543, 1720, 1821
Bst1107I	GTATAC	1 cut(s)	1714
Bst2UI	CCWGG	1 cut(s)	555
Bst4CI	ACNGT	2 cut(s)	446, 705
Bst6I	CTCTTC	5 cut(s)	29, 49, 875, 1244, 1974
BstACI	GRCGYC	2 cut(s)	419, 1797
BstAUI	TGTACA	1 cut(s)	949
BstC8I	GCNNGC	3 cut(s)	668, 689, 1409
BstDEI	CTNAG	9 cut(s)	281, 313, 1384, 1398, 1764, 1772, 1879, 1926, 1938
BstDSI	CCRYGG	2 cut(s)	1543, 1821
BstF5I	GGATG	5 cut(s)	940, 1260, 1509, 1526, 1615
BstKTI	GATC	8 cut(s)	110, 930, 1205, 1383, 1432, 1734, 1831, 1888
BstMAI	GTCTC	4 cut(s)	218, 239, 741, 1865
BstMBI	GATC	8 cut(s)	107, 927, 1202, 1380, 1429, 1731, 1828, 1885
BstMWI	GCNNNNNNNGC	3 cut(s)	865, 1214, 1459
BstNI	CCWGG	1 cut(s)	555
BstNSI	RCATGY	1 cut(s)	1497
BstSCI	CCNGG	3 cut(s)	553, 606, 1748
BstSFI	CTRYAG	1 cut(s)	1895
BstV1I	GCAGC	7 cut(s)	855, 1008, 1184, 1416, 1627, 1881, 1909
BstV2I	GAAGAC	1 cut(s)	1587
BstX2I	RGATCY	1 cut(s)	107
BstXI	CCANNNNNNTGG	1 cut(s)	341
BstYI	RGATCY	1 cut(s)	107
BstZ17I	GTATAC	1 cut(s)	1714
Bsu36I	CCTNAGG	1 cut(s)	1398
BsuRI	GGCC	4 cut(s)	5, 534, 670, 1462
BtgI	CCRYGG	2 cut(s)	1543, 1821
BtgZI	GCGATG	1 cut(s)	744
BtsCI	GGATG	5 cut(s)	940, 1260, 1509, 1526, 1615
BtsIMutI	CAGTG	2 cut(s)	1811, 1887
BveI	ACCTGC	1 cut(s)	1545
Cac8I	GCNNGC	3 cut(s)	668, 689, 1409
CaiI	CAGNNNCTG	2 cut(s)	1771, 1903
CciI	TCATGA	1 cut(s)	297
Cfr10I	RCCGGY	2 cut(s)	209, 1591
Cfr13I	GGNCC	8 cut(s)	145, 317, 533, 599, 668, 1594, 1665, 1810
CseI	GACGC	1 cut(s)	817
Csp6I	GTAC	5 cut(s)	950, 1008, 1140, 1675, 1985
CspAI	ACCGGT	1 cut(s)	209
CviQI	GTAC	5 cut(s)	950, 1008, 1140, 1675, 1985
DdeI	CTNAG	9 cut(s)	281, 313, 1384, 1398, 1764, 1772, 1879, 1926, 1938
DpnI	GATC	8 cut(s)	109, 929, 1204, 1382, 1431, 1733, 1830, 1887
DpnII	GATC	8 cut(s)	107, 927, 1202, 1380, 1429, 1731, 1828, 1885
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	5 cut(s)	29, 49, 875, 1244, 1974
EarI	CTCTTC	5 cut(s)	29, 49, 875, 1244, 1974
EciI	GGCGGA	3 cut(s)	705, 729, 1803
Eco130I	CCWWGG	5 cut(s)	633, 1483, 1543, 1720, 1821
Eco31I	GGTCTC	2 cut(s)	218, 239
Eco47I	GGWCC	6 cut(s)	145, 317, 599, 1594, 1665, 1810
Eco57I	CTGAAG	1 cut(s)	1493
Eco81I	CCTNAGG	1 cut(s)	1398
EcoO109I	RGGNCCY	4 cut(s)	145, 533, 599, 1665
EcoRII	CCWGG	1 cut(s)	553
EcoT14I	CCWWGG	5 cut(s)	633, 1483, 1543, 1720, 1821
EcoT22I	ATGCAT	1 cut(s)	262
ErhI	CCWWGG	5 cut(s)	633, 1483, 1543, 1720, 1821
FalI	AAGNNNNNCTT	4 cut(s)	1319, 1351, 1391, 1423
FaqI	GGGAC	2 cut(s)	158, 1082
FauI	CCCGC	3 cut(s)	361, 659, 1058
FbaI	TGATCA	1 cut(s)	1828
FblI	GTMKAC	1 cut(s)	1713
FokI	GGATG	5 cut(s)	947, 1267, 1496, 1513, 1602
FspBI	CTAG	3 cut(s)	497, 1632, 1850
GsaI	CCCAGC	2 cut(s)	183, 1690
GsuI	CTGGAG	1 cut(s)	102
HaeIII	GGCC	4 cut(s)	5, 534, 670, 1462
HapII	CCGG	7 cut(s)	210, 240, 384, 608, 1154, 1592, 1749
HgaI	GACGC	1 cut(s)	817
Hin1I	GRCGYC	2 cut(s)	419, 1797
HincII	GTYRAC	1 cut(s)	1039
HindII	GTYRAC	1 cut(s)	1039
HindIII	AAGCTT	2 cut(s)	338, 1989
HpaII	CCGG	7 cut(s)	210, 240, 384, 608, 1154, 1592, 1749
HphI	GGTGA	7 cut(s)	47, 199, 1135, 1231, 1258, 1439, 1738
Hpy166II	GTNNAC	3 cut(s)	1039, 1126, 1714
Hpy188I	TCNGA	6 cut(s)	284, 1387, 1450, 1473, 1773, 1905
Hpy188III	TCNNGA	8 cut(s)	94, 103, 240, 298, 326, 349, 874, 1336
Hpy8I	GTNNAC	3 cut(s)	1039, 1126, 1714
Hpy99I	CGWCG	3 cut(s)	424, 1799, 1802
HpyAV	CCTTC	4 cut(s)	647, 952, 1159, 1299
HpyCH4III	ACNGT	2 cut(s)	446, 705
HpyCH4IV	ACGT	5 cut(s)	252, 419, 909, 1416, 1797
HpyCH4V	TGCA	9 cut(s)	192, 260, 687, 1423, 1493, 1526, 1643, 1897, 1923
HpyF10VI	GCNNNNNNNGC	3 cut(s)	865, 1214, 1459
HpyF3I	CTNAG	9 cut(s)	281, 313, 1384, 1398, 1764, 1772, 1879, 1926, 1938
HpySE526I	ACGT	5 cut(s)	252, 419, 909, 1416, 1797
Hsp92I	GRCGYC	2 cut(s)	419, 1797
KflI	GGGWCCC	1 cut(s)	145
Kpn2I	TCCGGA	1 cut(s)	239
Ksp22I	TGATCA	1 cut(s)	1828
Kzo9I	GATC	8 cut(s)	107, 927, 1202, 1380, 1429, 1731, 1828, 1885
LmnI	GCTCC	3 cut(s)	858, 1450, 1913
Lsp1109I	GCAGC	7 cut(s)	855, 1008, 1184, 1416, 1627, 1881, 1909
LweI	GCATC	4 cut(s)	76, 247, 1282, 1535
MaeI	CTAG	3 cut(s)	497, 1632, 1850
MaeII	ACGT	5 cut(s)	252, 419, 909, 1416, 1797
MaeIII	GTNAC	4 cut(s)	72, 164, 446, 591
MalI	GATC	8 cut(s)	109, 929, 1204, 1382, 1431, 1733, 1830, 1887
MboI	GATC	8 cut(s)	107, 927, 1202, 1380, 1429, 1731, 1828, 1885
MfeI	CAATTG	1 cut(s)	485
MflI	RGATCY	1 cut(s)	107
MhlI	GDGCHC	1 cut(s)	915
MlyI	GAGTC	6 cut(s)	482, 1025, 1064, 1096, 1333, 1871
MmeI	TCCRAC	3 cut(s)	114, 722, 1891
Mph1103I	ATGCAT	1 cut(s)	262
MroI	TCCGGA	1 cut(s)	239
MroXI	GAANNNNTTC	2 cut(s)	504, 1392
MseI	TTAA	6 cut(s)	263, 291, 441, 548, 1319, 1955
MslI	CAYNNNNRTG	1 cut(s)	945
MspA1I	CMGCKG	1 cut(s)	8
MspI	CCGG	7 cut(s)	210, 240, 384, 608, 1154, 1592, 1749
MspR9I	CCNGG	3 cut(s)	555, 608, 1750
MunI	CAATTG	1 cut(s)	485
MvaI	CCWGG	1 cut(s)	555
MwoI	GCNNNNNNNGC	3 cut(s)	865, 1214, 1459
NciI	CCSGG	2 cut(s)	608, 1750
NcoI	CCATGG	2 cut(s)	1543, 1821
NdeII	GATC	8 cut(s)	107, 927, 1202, 1380, 1429, 1731, 1828, 1885
NlaIV	GGNNCC	5 cut(s)	146, 147, 1667, 1792, 1811
NmeAIII	GCCGAG	1 cut(s)	894
NmuCI	GTSAC	1 cut(s)	72
NsiI	ATGCAT	1 cut(s)	262
NspI	RCATGY	1 cut(s)	1497
PagI	TCATGA	1 cut(s)	297
PcsI	WCGNNNNNNNCGW	1 cut(s)	648
PdmI	GAANNNNTTC	2 cut(s)	504, 1392
PfeI	GAWTC	4 cut(s)	746, 1021, 1506, 1682
PfoI	TCCNGGA	1 cut(s)	606
PinAI	ACCGGT	1 cut(s)	209
PleI	GAGTC	6 cut(s)	481, 1024, 1064, 1095, 1333, 1871
PpsI	GAGTC	6 cut(s)	481, 1024, 1064, 1095, 1333, 1871
PpuMI	RGGWCCY	3 cut(s)	145, 599, 1665
PshBI	ATTAAT	1 cut(s)	291
PsiI	TTATAA	1 cut(s)	1212
Psp5II	RGGWCCY	3 cut(s)	145, 599, 1665
Psp6I	CCWGG	1 cut(s)	553
PspFI	CCCAGC	2 cut(s)	179, 1686
PspGI	CCWGG	1 cut(s)	553
PspN4I	GGNNCC	5 cut(s)	146, 147, 1667, 1792, 1811
PspPI	GGNCC	8 cut(s)	145, 317, 533, 599, 668, 1594, 1665, 1810
PspPPI	RGGWCCY	3 cut(s)	145, 599, 1665
PstI	CTGCAG	1 cut(s)	1899
PstNI	CAGNNNCTG	2 cut(s)	1771, 1903
PsuI	RGATCY	1 cut(s)	107
RsaI	GTAC	5 cut(s)	951, 1009, 1141, 1676, 1986
RsaNI	GTAC	5 cut(s)	950, 1008, 1140, 1675, 1985
RseI	CAYNNNNRTG	1 cut(s)	945
SaqAI	TTAA	6 cut(s)	263, 291, 441, 548, 1319, 1955
Sau3AI	GATC	8 cut(s)	107, 927, 1202, 1380, 1429, 1731, 1828, 1885
Sau96I	GGNCC	8 cut(s)	145, 317, 533, 599, 668, 1594, 1665, 1810
SchI	GAGTC	6 cut(s)	482, 1025, 1064, 1096, 1333, 1871
ScrFI	CCNGG	3 cut(s)	555, 608, 1750
SduI	GDGCHC	1 cut(s)	915
SfaNI	GCATC	4 cut(s)	76, 247, 1282, 1535
SfcI	CTRYAG	1 cut(s)	1895
SinI	GGWCC	6 cut(s)	145, 317, 599, 1594, 1665, 1810
SmiMI	CAYNNNNRTG	1 cut(s)	945
SmlI	CTYRAG	2 cut(s)	101, 674
SmoI	CTYRAG	2 cut(s)	101, 674
SspMI	CTAG	3 cut(s)	497, 1632, 1850
StyD4I	CCNGG	3 cut(s)	553, 606, 1748
StyI	CCWWGG	5 cut(s)	633, 1483, 1543, 1720, 1821
TaaI	ACNGT	2 cut(s)	446, 705
TaiI	ACGT	5 cut(s)	255, 422, 912, 1419, 1800
TaqI	TCGA	5 cut(s)	620, 642, 1019, 1073, 1085
TatI	WGTACW	3 cut(s)	949, 1007, 1674
TauI	GCSGC	4 cut(s)	8, 694, 766, 1172
TfiI	GAWTC	4 cut(s)	746, 1021, 1506, 1682
Tru1I	TTAA	6 cut(s)	263, 291, 441, 548, 1319, 1955
Tru9I	TTAA	6 cut(s)	263, 291, 441, 548, 1319, 1955
TscAI	CASTG	2 cut(s)	1811, 1887
TseFI	GTSAC	1 cut(s)	72
TseI	GCWGC	7 cut(s)	868, 996, 1172, 1404, 1640, 1894, 1897
Tsp45I	GTSAC	1 cut(s)	72
TspDTI	ATGAA	7 cut(s)	314, 497, 962, 1121, 1178, 1280, 1498
TspGWI	ACGGA	1 cut(s)	120
TspRI	CASTG	2 cut(s)	1811, 1887
VpaK11BI	GGWCC	6 cut(s)	145, 317, 599, 1594, 1665, 1810
VspI	ATTAAT	1 cut(s)	291
XapI	RAATTY	5 cut(s)	244, 308, 432, 623, 1437
XceI	RCATGY	1 cut(s)	1497
XmiI	GTMKAC	1 cut(s)	1713
XmnI	GAANNNNTTC	2 cut(s)	504, 1392
XspI	CTAG	3 cut(s)	497, 1632, 1850
ZraI	GACGTC	2 cut(s)	420, 1798
Zsp2I	ATGCAT	1 cut(s)	262

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.