Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0015099

Physical Location & Seq

Genomic Coordinates Reverse (-)

8288171 .. 8291054

Gene Structure 2884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG100500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGTCGCTGTTGGCTGCCGCCTCCCCTTCCTCTACCTCCTCCTCTTCTTCTTTACCTTCTCCCCTTACCTCTCGCTTTCCTTGTCCGAGGAGGAAGCCTTGCTTAAGCTCAAGGCATCCTTCACCAACTCTACGGCCTTGGCCAACTGGGTTCCCATCCCGGGTTCCTCCCCATGCAAATGGGCCGGCGTCTACTGCACTAAGGGCGGCATCGTCCAGGGTCTTCATCTCCAGAAAATGGGCCTTTCTGGAACAATCAACATCGAAGCCTTGACCCAACTCAAGGGCCTCCGAGCCCTTAGCTTTGACGACAACAACTTCGCGGGAAGTATCCCCGACTTCCACACACTTGGAGCTCTCAAGTCTCTGTCAATAACCAACAACAATTTCTCCGGCGAAATCCCAAAGGATTTATTTGCCGAAATGAACTCGTTAAAGAAAGTTTACCTCTCGAAAAACAAGTTCTCCGGCAAAATCCCGGAATCGCTAACGAAGTTGAAATATCTGATGGAGCTTCATCTCGAGAACAACCAATTCTCCGGGGCCATCCCGGAATCGCTGACCGAGTTGAAAAATCTAACGCAGCTTCATCTCGAGAACAACCAAATCTCCGGAGCCATCCCTGACTTTAAAGAGGAATCTCTAAAAGATCTAGATTTGTCTAATAACAAGCTCAAGGGTGCAATCCCGGATGACATGTCCAGATATGGTCCTAAGATATTTGCCGGAAATGAAGGACTTTGTGGCGGACCACTCAAGAAGCCATGTGATAATGCACCTACACCGTCACCGTCACCATCACCACCAGAACAACCAAAACCTCATGCAGGAAAAACAGACCAATCATCGTCCAACACAATCAAGATAGTAGTCGGGGTGATTGTTGCTGGCGTAGTGGTTATGCTGTTGCTGGTGATAATAATTAGATATAAGAGGCGACGGAGGGAGGAGAATTTTAGTGTTCTTGGCAAGGAAAACATGGAGGAGCATGTACCTCAACACCATGGGGAGGTGGTTGAAGTTCATGTGCCAAGCTCCAATAGCAGAAGTGTAGGTAGCACTTCTGCGCAGGCCGCGACGTTGAGGTCGGCCAGTAGCAAGAAATCTGGGGATTCCAAGAAGGGTTCTCATAGCGGGAAGAATGCAGGGAATAATGAGTTGTTGATGGTGAATGACCAGAGAGGCACGTTTGGGTTGCCAGATTTGATGAAAGCCGCGGCGGAGGTTTTGGGGAATGGAGGATTGGGGTCAGCTTACAAGGCTGTGATGGGTAATGGGTTGTCTGTGGTAGTGAAGAGGATGAGGGACATGAATAGACTAGGGAGAGATGGGTTTGATGCTGAGATGAGAAGGTTTGGAAGATTGAGGCATAGGAATATCTTGACTCCCTTGGCTTACCATTATAGGAGAGAAGAGAAGCTGTTGATTTCAGACTACATTCCTAAAGGCAGCTTGTTATATGTTTTGCATGGTGATCGAGGAACTTCTCATTCGGAGCTGACCTGGCCTACCCGTTTGAGAATTATCCAAGGAGTTGCGAAAGGAATGAAGTTTCTGCATACAGAGTTTGCAGCCTATGATTTGCCCCATGGAAATCTCAAGTCTAGCAATATTCTTTTAGACAAAGATTATGAGCCAATTCTTAATGACTATGCTTTTCATCCACTAATCAATCCCAGCAATGCTGCACAAACAATGTTTGCTTTTAAGACCCCAGAGTACATAGAATCCCAGCAAATATCTCCAAAATCTGATGTTTATTGTCTTGGAATAGTCATTCTTGAAATCCTTACCGGAAAGTTCCCGTCTCAATATTTAAGCAATGGCAAAGGTGGGATTGATGTGGTTCAATGGGTGCAGTCAGCAATGGCCGAGCAGAGAGAGCAAGAGCTGCTAGACCCAGAGATTGAAACCAATACAGAATCAGCGAACCAGATGCTGCAGCTTCTCCAAATCGGAGCTGATTGCACTGAGAGTAAACCTGATCGAAGACCTGATATAAGGGAGGCCATTAGGAGGATACTCGAGGTACAAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009856 GO:0009987 GO:0010183 GO:0010769 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0030054 GO:0030427 GO:0032501 GO:0032502 GO:0035838 GO:0036211 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0042802 GO:0042995 GO:0043170 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044463 GO:0044464 GO:0044706 GO:0045595 GO:0048638 GO:0048856 GO:0048868 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051286 GO:0051510 GO:0051704 GO:0055044 GO:0060284 GO:0065007 GO:0071704 GO:0071944 GO:0080092 GO:0090404 GO:0090406 GO:0120025 GO:0120038 GO:0140096 GO:1901564 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

679

Amino Acids

74.85

Weight (kDa)

8.66

Isoelectric Point (pI)

40.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	29 - 67	3.2e-10	Leucine rich repeat N-terminal domain
LRR_14	PF23598	75 - 201	4.3e-06	Leucine-rich repeat region
LRR_8	PF13855	120 - 179	8.1e-08	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	407 - 672	2.6e-25	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	408 - 671	2.4e-25	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42880 AT5G20690
fragaria_vesca	FvH4_1g09030
malus_domestica	MD02G1095500.v1.1 MD15G1220000.v1.1
prunus_persica	Prupe.7G195600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0095451
rosa_laevigata	RLG00000016568
rosa_multiflora	Rmu_co8386329.1_g000001
rosa_roxburghii	Rroxscaffold_2G00146330
rosa_rugosa	Rorug02G0051200.1
rosa_samantha	Rh2AG099200 Rh2BG100500 Rh2CG102600 Rh2DG100100
rosa_wichuraiana	Rw2G007510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1084
Acc16I	TGCGCA	1 cut(s)	1068
AccB7I	CCANNNNNTGG	1 cut(s)	238
AccI	GTMKAC	1 cut(s)	192
AccII	CGCG	3 cut(s)	323, 1076, 1217
AccIII	TCCGGA	1 cut(s)	611
AciI	CCGC	9 cut(s)	19, 207, 323, 747, 1074, 1134, 1215, 1217, 1220
AcoI	YGGCCR	3 cut(s)	141, 1089, 1869
AcsI	RAATTY	1 cut(s)	952
AcyI	GRCGYC	1 cut(s)	189
AfaI	GTAC	3 cut(s)	993, 1721, 2031
AfiI	CCNNNNNNNGG	6 cut(s)	161, 238, 283, 827, 1009, 2016
AflII	CTTAAG	1 cut(s)	104
AflIII	ACRYGT	1 cut(s)	696
AgsI	TTSAA	6 cut(s)	499, 571, 1019, 1784, 1850, 1910
AjnI	CCWGG	2 cut(s)	216, 1502
AjuI	GAANNNNNNNTTGG	4 cut(s)	371, 403, 1226, 1258
Alw21I	GWGCWC	1 cut(s)	358
Alw26I	GTCTC	2 cut(s)	369, 1812
AlwNI	CAGNNNCTG	1 cut(s)	1939
Ama87I	CYCGRG	4 cut(s)	160, 521, 593, 2024
Aor13HI	TCCGGA	1 cut(s)	611
ApeKI	GCWGC	8 cut(s)	15, 583, 1449, 1571, 1685, 1891, 1939, 1942
ApoI	RAATTY	1 cut(s)	952
ArsI	GACNNNNNNTTYG	2 cut(s)	302, 334
AspLEI	GCGC	1 cut(s)	1069
AspS9I	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
AsuC2I	CCSGG	6 cut(s)	161, 162, 479, 541, 551, 689
AsuHPI	GGTGA	8 cut(s)	115, 780, 786, 792, 889, 925, 1180, 1484
AvaI	CYCGRG	4 cut(s)	160, 521, 593, 2024
AvaII	GGWCC	2 cut(s)	710, 749
BalI	TGGCCA	1 cut(s)	143
BanII	GRGCYC	2 cut(s)	298, 358
BbsI	GAAGAC	2 cut(s)	215, 1996
Bbv12I	GWGCWC	1 cut(s)	358
BbvI	GCAGC	8 cut(s)	2, 595, 1461, 1583, 1672, 1878, 1926, 1954
BccI	CCATC	8 cut(s)	164, 502, 554, 626, 805, 1159, 1261, 1322
BceAI	ACGGC	1 cut(s)	150
BcgI	CGANNNNNNTGC	4 cut(s)	1457, 1491, 1918, 1952
BciT130I	CCWGG	2 cut(s)	218, 1504
BciVI	GTATCC	2 cut(s)	341, 2013
BcnI	CCSGG	6 cut(s)	161, 162, 479, 541, 551, 689
BcoDI	GTCTC	2 cut(s)	369, 1812
BfaI	CTAG	4 cut(s)	653, 1319, 1605, 1895
BfmI	CTRYAG	1 cut(s)	1940
BfrI	CTTAAG	1 cut(s)	104
BfuI	GTATCC	2 cut(s)	341, 2013
BglII	AGATCT	1 cut(s)	649
Bme1390I	CCNGG	8 cut(s)	161, 162, 218, 479, 541, 551, 689, 1504
Bme18I	GGWCC	2 cut(s)	710, 749
BmeT110I	CYCGRG	4 cut(s)	160, 521, 593, 2024
BmgT120I	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
BmiI	GGNNCC	4 cut(s)	153, 166, 544, 616
BmrFI	CCNGG	8 cut(s)	161, 162, 218, 479, 541, 551, 689, 1504
BmrI	ACTGGG	1 cut(s)	157
BmsI	GCATC	4 cut(s)	125, 219, 1327, 1926
BmuI	ACTGGG	1 cut(s)	157
BpiI	GAAGAC	2 cut(s)	215, 1996
BpmI	CTGGAG	1 cut(s)	215
Bpu10I	CCTNAGC	1 cut(s)	299
BpuEI	CTTGAG	6 cut(s)	95, 266, 344, 659, 740, 1583
BpuMI	CCSGG	6 cut(s)	161, 162, 479, 541, 551, 689
BsaHI	GRCGYC	1 cut(s)	189
BsaWI	WCCGGW	2 cut(s)	611, 1793
BsaXI	ACNNNNNCTCC	8 cut(s)	374, 404, 449, 479, 521, 551, 593, 623
Bsc4I	CCNNNNNNNGG	6 cut(s)	161, 238, 283, 827, 1009, 2016
Bse118I	RCCGGY	1 cut(s)	185
Bse1I	ACTGG	2 cut(s)	152, 1092
Bse3DI	GCAATG	3 cut(s)	1687, 1828, 1872
BseAI	TCCGGA	1 cut(s)	611
BseBI	CCWGG	2 cut(s)	218, 1504
BseGI	GGATG	7 cut(s)	116, 156, 546, 618, 697, 1305, 1660
BseLI	CCNNNNNNNGG	6 cut(s)	161, 238, 283, 827, 1009, 2016
BseMI	GCAATG	3 cut(s)	1687, 1828, 1872
BseMII	CTCAG	2 cut(s)	1332, 1962
BseNI	ACTGG	2 cut(s)	152, 1092
BseRI	GAGGAG	5 cut(s)	29, 32, 104, 962, 998
BseXI	GCAGC	8 cut(s)	2, 595, 1461, 1583, 1672, 1878, 1926, 1954
BseYI	CCCAGC	2 cut(s)	1676, 1731
BsgI	GTGCAG	3 cut(s)	181, 1671, 1877
Bsh1236I	CGCG	3 cut(s)	323, 1076, 1217
BsiHKAI	GWGCWC	1 cut(s)	358
BsiHKCI	CYCGRG	4 cut(s)	160, 521, 593, 2024
BslFI	GGGAC	1 cut(s)	1319
BslI	CCNNNNNNNGG	6 cut(s)	161, 238, 283, 827, 1009, 2016
BsmAI	GTCTC	2 cut(s)	369, 1812
BsmBI	CGTCTC	1 cut(s)	1812
BsmFI	GGGAC	1 cut(s)	1319
BsmI	GAATGC	1 cut(s)	1147
BsoBI	CYCGRG	4 cut(s)	160, 521, 593, 2024
Bsp1286I	GDGCHC	2 cut(s)	298, 358
Bsp13I	TCCGGA	1 cut(s)	611
Bsp143I	GATC	3 cut(s)	649, 1474, 1984
Bsp19I	CCATGG	2 cut(s)	1003, 1588
BspACI	CCGC	9 cut(s)	19, 207, 323, 747, 1074, 1134, 1215, 1217, 1220
BspCNI	CTCAG	2 cut(s)	1333, 1963
BspEI	TCCGGA	1 cut(s)	611
BspFNI	CGCG	3 cut(s)	323, 1076, 1217
BspLI	GGNNCC	4 cut(s)	153, 166, 544, 616
BspMAI	CTGCAG	1 cut(s)	1944
BspTI	CTTAAG	1 cut(s)	104
BsrDI	GCAATG	3 cut(s)	1687, 1828, 1872
BsrFI	RCCGGY	1 cut(s)	185
BsrI	ACTGG	2 cut(s)	152, 1092
BssAI	RCCGGY	1 cut(s)	185
BssMI	GATC	3 cut(s)	649, 1474, 1984
BssNI	GRCGYC	1 cut(s)	189
BssT1I	CCWWGG	5 cut(s)	138, 1003, 1389, 1528, 1588
Bst2UI	CCWGG	2 cut(s)	218, 1504
Bst4CI	ACNGT	2 cut(s)	786, 792
Bst6I	CTCTTC	3 cut(s)	50, 1289, 1407
BstACI	GRCGYC	1 cut(s)	189
BstAFI	CTTAAG	1 cut(s)	104
BstAPI	GCANNNNNTGC	1 cut(s)	1891
BstC8I	GCNNGC	3 cut(s)	187, 889, 1071
BstDEI	CTNAG	5 cut(s)	201, 299, 714, 1341, 1971
BstDSI	CCRYGG	3 cut(s)	1003, 1215, 1588
BstENI	CCTNNNNNAGG	1 cut(s)	825
BstF5I	GGATG	7 cut(s)	116, 156, 546, 618, 697, 1305, 1660
BstFNI	CGCG	3 cut(s)	323, 1076, 1217
BstHHI	GCGC	1 cut(s)	1069
BstKTI	GATC	3 cut(s)	652, 1477, 1987
BstMAI	GTCTC	2 cut(s)	369, 1812
BstMBI	GATC	3 cut(s)	649, 1474, 1984
BstMWI	GCNNNNNNNGC	8 cut(s)	195, 204, 1041, 1073, 1259, 1504, 1882, 1891
BstNI	CCWGG	2 cut(s)	218, 1504
BstNSI	RCATGY	2 cut(s)	700, 992
BstSCI	CCNGG	8 cut(s)	159, 160, 216, 477, 539, 549, 687, 1502
BstSFI	CTRYAG	1 cut(s)	1940
BstUI	CGCG	3 cut(s)	323, 1076, 1217
BstV1I	GCAGC	8 cut(s)	2, 595, 1461, 1583, 1672, 1878, 1926, 1954
BstV2I	GAAGAC	2 cut(s)	215, 1996
BstX2I	RGATCY	1 cut(s)	649
BstXI	CCANNNNNNTGG	2 cut(s)	180, 350
BstYI	RGATCY	1 cut(s)	649
BsuI	GTATCC	2 cut(s)	341, 2013
BtgI	CCRYGG	3 cut(s)	1003, 1215, 1588
BtsCI	GGATG	7 cut(s)	116, 156, 546, 618, 697, 1305, 1660
BtsIMutI	CAGTG	1 cut(s)	1968
Cac8I	GCNNGC	3 cut(s)	187, 889, 1071
CaiI	CAGNNNCTG	1 cut(s)	1939
CfoI	GCGC	1 cut(s)	1069
Cfr10I	RCCGGY	1 cut(s)	185
Cfr13I	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
Cfr42I	CCGCGG	1 cut(s)	1218
Cfr9I	CCCGGG	1 cut(s)	160
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	3 cut(s)	992, 1720, 2030
CviQI	GTAC	3 cut(s)	992, 1720, 2030
DdeI	CTNAG	5 cut(s)	201, 299, 714, 1341, 1971
DpnI	GATC	3 cut(s)	651, 1476, 1986
DpnII	GATC	3 cut(s)	649, 1474, 1984
DraI	TTTAAA	1 cut(s)	631
DrdI	GACNNNNNNGTC	1 cut(s)	1084
DseDI	GACNNNNNNGTC	1 cut(s)	1084
EaeI	YGGCCR	3 cut(s)	141, 1089, 1869
Eam1104I	CTCTTC	3 cut(s)	50, 1289, 1407
EarI	CTCTTC	3 cut(s)	50, 1289, 1407
EciI	GGCGGA	2 cut(s)	762, 1235
Ecl136II	GAGCTC	1 cut(s)	356
Eco130I	CCWWGG	5 cut(s)	138, 1003, 1389, 1528, 1588
Eco24I	GRGCYC	2 cut(s)	298, 358
Eco47I	GGWCC	2 cut(s)	710, 749
Eco53kI	GAGCTC	1 cut(s)	356
Eco88I	CYCGRG	4 cut(s)	160, 521, 593, 2024
EcoICRI	GAGCTC	1 cut(s)	356
EcoNI	CCTNNNNNAGG	1 cut(s)	825
EcoO109I	RGGNCCY	1 cut(s)	286
EcoRII	CCWGG	2 cut(s)	216, 1502
EcoT14I	CCWWGG	5 cut(s)	138, 1003, 1389, 1528, 1588
EcoT38I	GRGCYC	2 cut(s)	298, 358
ErhI	CCWWGG	5 cut(s)	138, 1003, 1389, 1528, 1588
Esp3I	CGTCTC	1 cut(s)	1812
FalI	AAGNNNNNCTT	4 cut(s)	87, 119, 104, 136
FaqI	GGGAC	1 cut(s)	1319
FauI	CCCGC	2 cut(s)	316, 1127
FblI	GTMKAC	1 cut(s)	192
FokI	GGATG	7 cut(s)	103, 143, 533, 605, 704, 1312, 1647
FriOI	GRGCYC	2 cut(s)	298, 358
FspBI	CTAG	4 cut(s)	653, 1319, 1605, 1895
FspI	TGCGCA	1 cut(s)	1068
GlaI	GCGC	1 cut(s)	1068
GsaI	CCCAGC	2 cut(s)	1680, 1735
GsuI	CTGGAG	1 cut(s)	215
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	1 cut(s)	1069
Hin1I	GRCGYC	1 cut(s)	189
Hin6I	GCGC	1 cut(s)	1067
HinP1I	GCGC	1 cut(s)	1067
HinfI	GANTC	7 cut(s)	482, 554, 638, 1112, 1384, 1727, 1922
HphI	GGTGA	8 cut(s)	115, 780, 786, 792, 889, 925, 1180, 1484
Hpy166II	GTNNAC	3 cut(s)	193, 445, 1979
Hpy188I	TCNGA	7 cut(s)	88, 293, 507, 1432, 1495, 1753, 1958
Hpy8I	GTNNAC	3 cut(s)	193, 445, 1979
Hpy99I	CGWCG	2 cut(s)	942, 1081
HpyAV	CCTTC	6 cut(s)	37, 67, 130, 728, 1114, 1344
HpyCH4III	ACNGT	2 cut(s)	786, 792
HpyCH4IV	ACGT	2 cut(s)	1079, 1187
HpyF10VI	GCNNNNNNNGC	8 cut(s)	195, 204, 1041, 1073, 1259, 1504, 1882, 1891
HpyF3I	CTNAG	5 cut(s)	201, 299, 714, 1341, 1971
HpySE526I	ACGT	2 cut(s)	1079, 1187
Hsp92I	GRCGYC	1 cut(s)	189
HspAI	GCGC	1 cut(s)	1067
Kpn2I	TCCGGA	1 cut(s)	611
KroI	GCCGGC	1 cut(s)	185
KroNI	GCCGGC	1 cut(s)	187
KspI	CCGCGG	1 cut(s)	1218
Kzo9I	GATC	3 cut(s)	649, 1474, 1984
LmnI	GCTCC	7 cut(s)	353, 511, 614, 985, 1040, 1495, 1958
Lsp1109I	GCAGC	8 cut(s)	2, 595, 1461, 1583, 1672, 1878, 1926, 1954
LweI	GCATC	4 cut(s)	125, 219, 1327, 1926
MaeI	CTAG	4 cut(s)	653, 1319, 1605, 1895
MaeII	ACGT	2 cut(s)	1079, 1187
MaeIII	GTNAC	2 cut(s)	786, 792
MalI	GATC	3 cut(s)	651, 1476, 1986
MboI	GATC	3 cut(s)	649, 1474, 1984
MboII	GAAGA	8 cut(s)	37, 40, 215, 1150, 1306, 1371, 1424, 2001
MflI	RGATCY	1 cut(s)	649
MhlI	GDGCHC	2 cut(s)	298, 358
MlsI	TGGCCA	1 cut(s)	143
MluCI	AATT	6 cut(s)	385, 533, 921, 952, 1521, 1638
MluNI	TGGCCA	1 cut(s)	143
MlyI	GAGTC	1 cut(s)	1378
MmeI	TCCRAC	1 cut(s)	876
Mox20I	TGGCCA	1 cut(s)	143
MroI	TCCGGA	1 cut(s)	611
MroNI	GCCGGC	1 cut(s)	185
MscI	TGGCCA	1 cut(s)	143
MseI	TTAA	6 cut(s)	105, 434, 630, 1644, 1707, 1817
MslI	CAYNNNNRTG	1 cut(s)	178
Msp20I	TGGCCA	1 cut(s)	143
MspA1I	CMGCKG	1 cut(s)	1217
MspCI	CTTAAG	1 cut(s)	104
MspR9I	CCNGG	8 cut(s)	161, 162, 218, 479, 541, 551, 689, 1504
Mva1269I	GAATGC	1 cut(s)	1147
MvaI	CCWGG	2 cut(s)	218, 1504
MvnI	CGCG	3 cut(s)	323, 1076, 1217
MwoI	GCNNNNNNNGC	8 cut(s)	195, 204, 1041, 1073, 1259, 1504, 1882, 1891
NaeI	GCCGGC	1 cut(s)	187
NciI	CCSGG	6 cut(s)	161, 162, 479, 541, 551, 689
NcoI	CCATGG	2 cut(s)	1003, 1588
NdeII	GATC	3 cut(s)	649, 1474, 1984
NgoMIV	GCCGGC	1 cut(s)	185
NlaIV	GGNNCC	4 cut(s)	153, 166, 544, 616
NmeAIII	GCCGAG	1 cut(s)	1897
NmuCI	GTSAC	2 cut(s)	786, 792
NsbI	TGCGCA	1 cut(s)	1068
NspI	RCATGY	2 cut(s)	700, 992
PaeR7I	CTCGAG	3 cut(s)	521, 593, 2024
PciI	ACATGT	1 cut(s)	696
PctI	GAATGC	1 cut(s)	1147
PdiI	GCCGGC	1 cut(s)	187
PfeI	GAWTC	6 cut(s)	482, 554, 638, 1112, 1727, 1922
PflMI	CCANNNNNTGG	1 cut(s)	238
PfoI	TCCNGGA	3 cut(s)	477, 549, 687
PleI	GAGTC	1 cut(s)	1378
PpsI	GAGTC	1 cut(s)	1378
PscI	ACATGT	1 cut(s)	696
Psp124BI	GAGCTC	1 cut(s)	358
Psp6I	CCWGG	2 cut(s)	216, 1502
PspFI	CCCAGC	2 cut(s)	1676, 1731
PspGI	CCWGG	2 cut(s)	216, 1502
PspN4I	GGNNCC	4 cut(s)	153, 166, 544, 616
PspPI	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
PspXI	VCTCGAGB	1 cut(s)	2024
PstI	CTGCAG	1 cut(s)	1944
PstNI	CAGNNNCTG	1 cut(s)	1939
PsuI	RGATCY	1 cut(s)	649
RsaI	GTAC	3 cut(s)	993, 1721, 2031
RsaNI	GTAC	3 cut(s)	992, 1720, 2030
RseI	CAYNNNNRTG	1 cut(s)	178
SacI	GAGCTC	1 cut(s)	358
SacII	CCGCGG	1 cut(s)	1218
SaqAI	TTAA	6 cut(s)	105, 434, 630, 1644, 1707, 1817
Sau3AI	GATC	3 cut(s)	649, 1474, 1984
Sau96I	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
SchI	GAGTC	1 cut(s)	1378
ScrFI	CCNGG	8 cut(s)	161, 162, 218, 479, 541, 551, 689, 1504
SduI	GDGCHC	2 cut(s)	298, 358
SfaNI	GCATC	4 cut(s)	125, 219, 1327, 1926
SfcI	CTRYAG	1 cut(s)	1940
Sfr274I	CTCGAG	3 cut(s)	521, 593, 2024
Sfr303I	CCGCGG	1 cut(s)	1218
SgrBI	CCGCGG	1 cut(s)	1218
SinI	GGWCC	2 cut(s)	710, 749
SlaI	CTCGAG	3 cut(s)	521, 593, 2024
SmaI	CCCGGG	1 cut(s)	162
SmiMI	CAYNNNNRTG	1 cut(s)	178
Sse9I	AATT	6 cut(s)	385, 533, 921, 952, 1521, 1638
SsiI	CCGC	9 cut(s)	19, 207, 323, 747, 1074, 1134, 1215, 1217, 1220
SspI	AATATT	2 cut(s)	1612, 1814
SspMI	CTAG	4 cut(s)	653, 1319, 1605, 1895
SstI	GAGCTC	1 cut(s)	358
StyD4I	CCNGG	8 cut(s)	159, 160, 216, 477, 539, 549, 687, 1502
StyI	CCWWGG	5 cut(s)	138, 1003, 1389, 1528, 1588
TaaI	ACNGT	2 cut(s)	786, 792
TaiI	ACGT	2 cut(s)	1082, 1190
TaqI	TCGA	7 cut(s)	264, 452, 522, 594, 1477, 1987, 2025
TaqII	GACCGA	1 cut(s)	578
TasI	AATT	6 cut(s)	385, 533, 921, 952, 1521, 1638
TatI	WGTACW	1 cut(s)	1719
TauI	GCSGC	5 cut(s)	21, 210, 1076, 1217, 1220
TfiI	GAWTC	6 cut(s)	482, 554, 638, 1112, 1727, 1922
Tru1I	TTAA	6 cut(s)	105, 434, 630, 1644, 1707, 1817
Tru9I	TTAA	6 cut(s)	105, 434, 630, 1644, 1707, 1817
TscAI	CASTG	1 cut(s)	1975
TseFI	GTSAC	2 cut(s)	786, 792
TseI	GCWGC	8 cut(s)	15, 583, 1449, 1571, 1685, 1891, 1939, 1942
Tsp45I	GTSAC	2 cut(s)	786, 792
TspGWI	ACGGA	1 cut(s)	955
TspMI	CCCGGG	1 cut(s)	160
TspRI	CASTG	1 cut(s)	1975
Van91I	CCANNNNNTGG	1 cut(s)	238
Vha464I	CTTAAG	1 cut(s)	104
VpaK11BI	GGWCC	2 cut(s)	710, 749
XagI	CCTNNNNNAGG	1 cut(s)	825
XapI	RAATTY	1 cut(s)	952
XbaI	TCTAGA	1 cut(s)	652
XceI	RCATGY	2 cut(s)	700, 992
XhoI	CTCGAG	3 cut(s)	521, 593, 2024
XmaI	CCCGGG	1 cut(s)	160
XmiI	GTMKAC	1 cut(s)	192
XspI	CTAG	4 cut(s)	653, 1319, 1605, 1895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.