Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0015099

Physical Location & Seq

Genomic Coordinates Reverse (-)

8395768 .. 8398651

Gene Structure 2884 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG099200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGGTCGCTGTTGGCTGCCGCCTCCCCTTCCTCTTCCTCCTCCTCTTCTTCTTTACCTTCTCCCCTTACCTCTCGCTTTCCTTGTCCCAGGAGGAAGCCTTGCTTAAGCTCAAGGCAACCTTCACCAACTCTACGGCCTTGGCCAACTGGGTTCCCATCCCGGGTTCCTCCCCATGCAAATGGGCCGGCGTCTACTGCACTAAGGGCGGCATCGTCCAGGGTCTTCATCTCCAGAAAATGGGCCTTTCTGGAACAATCAACATCGAAGCCTTGACCCAACTCAAGGGCCTCCGAGCCCTTGGCTTTGACGACAACAACTTCGCTGGAAGTATCCCCGACTTCCACACACTTGGAGCTCTCAAGTCTCTGTCAATAACCAACAACAATTTCTCCGGCGAAATCCCAAAGGATTTCTTTGCCGAAATGAACTCGTTAAAGAAAGTTTACCTCTCGAAAAACAAGTTCTCCGGCAAAATCCCGGAATCGCTAACGAAGTTGAAATATCTGATGGAGCTTCATCTCGAGAACAACCAATTCTCCGGGGCCATCCCGGAATCGCTGACCGAGTTGAAAAATCTAACGCAGCTTCATCTCGAGAACAACCAAATCTCCGGAGCCATCCCTGACTTTAAAGAGGAATCTCTAAAAGATCTAGATTTGTCTAATAACAAGCTCAAGGGTGCAATCCCGGATGACATGTCCAGATATGGTCCTAAGATATTTGCCGGAAATGAAGGACTTTGTGGCGGACCACTCAAGAAGCCATGTGATAATGCACCTACACCGTCACCGTCACCGTCACCATCACCACCAGAACAGCCAAAACCTCATGCAGGAAAAACAGACCAATCATCGTCCAACACAATCAAGATAGTGGTCGGGGTGATTGTTGCTGGCGTAGTGGTTATGCTGTTGCTGGTGATAATAATTAGATATAAGAGGCGACGGAGGGAGGAGAATTTTAGTGTTCTTGGCAAGGAAAACATGGAGGAGCATGTACCTCAACACCACGGGGAGGTGGTTGAAGTTCATGTGCCAAGCTCCAATAGCAGAAGTGGAGGTAGCACTTCTGCGCAGGCCGCGACGTTGAGGTCGGCCAGTAGCAAGAAATCTGGGGATTCCAAGAAGGGTTCTCATAGCGGGAAGAATGCAGGGAATAATGAGTTGTTGATGGTGAATGACCAGAGAGGCACGTTTGGGTTGCCAGATTTGATGAAAGCCGCGGCGGAGGTTTTGGGGAATGGAGGATTGGGGTCAGCTTACAAGGCTGTGATGGGTAATGGGTTGTCTGTGGTAGTGAAGAGGATGAGGGACATGAATAGACTAGGGAGAGATGGGTTTGATGCTGAGATGAGAAGGTTTGGAAGATTGAGTCATAGGAATATCTTGACTCCCTTGGCTTACCATTATAGGAGAGAAGAGAAGCTGTTGATTTCAGACTACATTCCTAAAGGCAGCTTGTTATATGTTTTGCATGGTGATCGAGGAACTTCTCATTCGGAGCTGACCTGGCCTACCCGTTTGAGAATTATCCAAGGAGTTGCGAAAGGGATGAAGTTTCTGCATACAGAGTTTGCAGCCTATGATTTGCCCCATGGAAATCTCAAGTCTAGCAATATTCTTTTAGACAAAGATTATGAGCCAATTCTTAATGACTATGCTTTTCATCCACTAATCAATCCCAGCAATGCTGCACAAACAATGTTTGCTTTTAAGACCCCAGAGTACATAGAATCCCAGCAAATATCTCCAAAATCTGATGTTTATTGTCTTGGAATAGTCATTCTTGAAATCCTTACTGGAAAGTTCCCGTCTCAATATTTAAGCAATGGCAAAGGTGGGATTGATGTGGTTCAATGGGTGCAGTCAGCAATGGCCGAGCAGAGAGAGCAAGAGCTGCTAGACCCAGAGATTGAAACCAATACAGAATCAGCGAACCAGATGCTGCAGCTTCTCCAAATCGGAGCTGATTGCACTGAGAGTAAACCTGATCGAAGACCTGATATAAGGGAGGCCATTAGGAGGATACTCGAGGTACAAGCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009856 GO:0009987 GO:0010183 GO:0010769 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0030054 GO:0030427 GO:0032501 GO:0032502 GO:0035838 GO:0036211 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0042802 GO:0042995 GO:0043170 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044463 GO:0044464 GO:0044706 GO:0045595 GO:0048638 GO:0048856 GO:0048868 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051286 GO:0051510 GO:0051704 GO:0055044 GO:0060284 GO:0065007 GO:0071704 GO:0071944 GO:0080092 GO:0090404 GO:0090406 GO:0120025 GO:0120038 GO:0140096 GO:1901564 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

681

Amino Acids

74.92

Weight (kDa)

8.67

Isoelectric Point (pI)

41.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	29 - 67	1.8e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	75 - 201	8.8e-07	Leucine-rich repeat region
LRR_8	PF13855	120 - 179	2.6e-08	Leucine rich repeat
LRR_8	PF13855	144 - 203	6.8e-08	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	409 - 674	2.5e-25	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	410 - 673	2.3e-25	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42880 AT5G20690
fragaria_vesca	FvH4_1g09030
malus_domestica	MD02G1095500.v1.1 MD15G1220000.v1.1
prunus_persica	Prupe.7G195600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0095451
rosa_laevigata	RLG00000016568
rosa_multiflora	Rmu_co8386329.1_g000001
rosa_roxburghii	Rroxscaffold_2G00146330
rosa_rugosa	Rorug02G0051200.1
rosa_samantha	Rh2AG099200 Rh2BG100500 Rh2CG102600 Rh2DG100100
rosa_wichuraiana	Rw2G007510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1090
Acc16I	TGCGCA	1 cut(s)	1074
AccB7I	CCANNNNNTGG	1 cut(s)	238
AccI	GTMKAC	1 cut(s)	192
AccII	CGCG	2 cut(s)	1082, 1223
AccIII	TCCGGA	1 cut(s)	611
AciI	CCGC	8 cut(s)	19, 207, 747, 1080, 1140, 1221, 1223, 1226
AcoI	YGGCCR	3 cut(s)	141, 1095, 1875
AcsI	RAATTY	1 cut(s)	958
AcyI	GRCGYC	1 cut(s)	189
AfaI	GTAC	3 cut(s)	999, 1727, 2037
AfiI	CCNNNNNNNGG	6 cut(s)	161, 238, 283, 833, 1015, 2022
AflII	CTTAAG	1 cut(s)	104
AflIII	ACRYGT	1 cut(s)	696
AgsI	TTSAA	6 cut(s)	499, 571, 1025, 1790, 1856, 1916
AjnI	CCWGG	3 cut(s)	87, 216, 1508
AjuI	GAANNNNNNNTTGG	4 cut(s)	371, 403, 1232, 1264
Alw21I	GWGCWC	1 cut(s)	358
Alw26I	GTCTC	2 cut(s)	369, 1818
AlwNI	CAGNNNCTG	1 cut(s)	1945
Ama87I	CYCGRG	4 cut(s)	160, 521, 593, 2030
Aor13HI	TCCGGA	1 cut(s)	611
ApeKI	GCWGC	8 cut(s)	15, 583, 1455, 1577, 1691, 1897, 1945, 1948
ApoI	RAATTY	1 cut(s)	958
ArsI	GACNNNNNNTTYG	2 cut(s)	302, 334
AspLEI	GCGC	1 cut(s)	1075
AspS9I	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
AsuC2I	CCSGG	6 cut(s)	161, 162, 479, 541, 551, 689
AsuHPI	GGTGA	9 cut(s)	115, 780, 786, 792, 798, 895, 931, 1186, 1490
AvaI	CYCGRG	4 cut(s)	160, 521, 593, 2030
AvaII	GGWCC	2 cut(s)	710, 749
BalI	TGGCCA	1 cut(s)	143
BanII	GRGCYC	2 cut(s)	298, 358
BbsI	GAAGAC	2 cut(s)	215, 2002
Bbv12I	GWGCWC	1 cut(s)	358
BbvI	GCAGC	8 cut(s)	2, 595, 1467, 1589, 1678, 1884, 1932, 1960
BccI	CCATC	8 cut(s)	164, 502, 554, 626, 811, 1165, 1267, 1328
BceAI	ACGGC	1 cut(s)	150
BcgI	CGANNNNNNTGC	4 cut(s)	1463, 1497, 1924, 1958
BciT130I	CCWGG	3 cut(s)	89, 218, 1510
BciVI	GTATCC	2 cut(s)	341, 2019
BcnI	CCSGG	6 cut(s)	161, 162, 479, 541, 551, 689
BcoDI	GTCTC	2 cut(s)	369, 1818
BfaI	CTAG	4 cut(s)	653, 1325, 1611, 1901
BfmI	CTRYAG	1 cut(s)	1946
BfrI	CTTAAG	1 cut(s)	104
BfuI	GTATCC	2 cut(s)	341, 2019
BglII	AGATCT	1 cut(s)	649
Bme1390I	CCNGG	9 cut(s)	89, 161, 162, 218, 479, 541, 551, 689, 1510
Bme18I	GGWCC	2 cut(s)	710, 749
BmeT110I	CYCGRG	4 cut(s)	160, 521, 593, 2030
BmgT120I	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
BmiI	GGNNCC	4 cut(s)	153, 166, 544, 616
BmrFI	CCNGG	9 cut(s)	89, 161, 162, 218, 479, 541, 551, 689, 1510
BmrI	ACTGGG	1 cut(s)	157
BmsI	GCATC	3 cut(s)	219, 1333, 1932
BmuI	ACTGGG	1 cut(s)	157
BpiI	GAAGAC	2 cut(s)	215, 2002
BpmI	CTGGAG	1 cut(s)	215
BpuEI	CTTGAG	6 cut(s)	95, 266, 344, 659, 740, 1589
BpuMI	CCSGG	6 cut(s)	161, 162, 479, 541, 551, 689
BsaHI	GRCGYC	1 cut(s)	189
BsaWI	WCCGGW	1 cut(s)	611
BsaXI	ACNNNNNCTCC	8 cut(s)	374, 404, 449, 479, 521, 551, 593, 623
Bsc4I	CCNNNNNNNGG	6 cut(s)	161, 238, 283, 833, 1015, 2022
Bse118I	RCCGGY	1 cut(s)	185
Bse1I	ACTGG	3 cut(s)	152, 1098, 1804
Bse3DI	GCAATG	3 cut(s)	1693, 1834, 1878
BseAI	TCCGGA	1 cut(s)	611
BseBI	CCWGG	3 cut(s)	89, 218, 1510
BseGI	GGATG	7 cut(s)	156, 546, 618, 697, 1311, 1557, 1666
BseLI	CCNNNNNNNGG	6 cut(s)	161, 238, 283, 833, 1015, 2022
BseMI	GCAATG	3 cut(s)	1693, 1834, 1878
BseMII	CTCAG	2 cut(s)	1338, 1968
BseNI	ACTGG	3 cut(s)	152, 1098, 1804
BseRI	GAGGAG	4 cut(s)	29, 32, 968, 1004
BseXI	GCAGC	8 cut(s)	2, 595, 1467, 1589, 1678, 1884, 1932, 1960
BseYI	CCCAGC	2 cut(s)	1682, 1737
BsgI	GTGCAG	3 cut(s)	181, 1677, 1883
Bsh1236I	CGCG	2 cut(s)	1082, 1223
BsiHKAI	GWGCWC	1 cut(s)	358
BsiHKCI	CYCGRG	4 cut(s)	160, 521, 593, 2030
BslFI	GGGAC	2 cut(s)	70, 1325
BslI	CCNNNNNNNGG	6 cut(s)	161, 238, 283, 833, 1015, 2022
BsmAI	GTCTC	2 cut(s)	369, 1818
BsmBI	CGTCTC	1 cut(s)	1818
BsmFI	GGGAC	2 cut(s)	70, 1325
BsmI	GAATGC	1 cut(s)	1153
BsoBI	CYCGRG	4 cut(s)	160, 521, 593, 2030
Bsp1286I	GDGCHC	2 cut(s)	298, 358
Bsp13I	TCCGGA	1 cut(s)	611
Bsp143I	GATC	3 cut(s)	649, 1480, 1990
Bsp19I	CCATGG	1 cut(s)	1594
BspACI	CCGC	8 cut(s)	19, 207, 747, 1080, 1140, 1221, 1223, 1226
BspCNI	CTCAG	2 cut(s)	1339, 1969
BspEI	TCCGGA	1 cut(s)	611
BspFNI	CGCG	2 cut(s)	1082, 1223
BspLI	GGNNCC	4 cut(s)	153, 166, 544, 616
BspMAI	CTGCAG	1 cut(s)	1950
BspTI	CTTAAG	1 cut(s)	104
BsrDI	GCAATG	3 cut(s)	1693, 1834, 1878
BsrFI	RCCGGY	1 cut(s)	185
BsrI	ACTGG	3 cut(s)	152, 1098, 1804
BssAI	RCCGGY	1 cut(s)	185
BssMI	GATC	3 cut(s)	649, 1480, 1990
BssNI	GRCGYC	1 cut(s)	189
BssT1I	CCWWGG	5 cut(s)	138, 298, 1395, 1534, 1594
Bst2UI	CCWGG	3 cut(s)	89, 218, 1510
Bst4CI	ACNGT	3 cut(s)	786, 792, 798
Bst6I	CTCTTC	4 cut(s)	38, 50, 1295, 1413
BstACI	GRCGYC	1 cut(s)	189
BstAFI	CTTAAG	1 cut(s)	104
BstAPI	GCANNNNNTGC	1 cut(s)	1897
BstC8I	GCNNGC	3 cut(s)	187, 895, 1077
BstDEI	CTNAG	4 cut(s)	201, 714, 1347, 1977
BstDSI	CCRYGG	3 cut(s)	1009, 1221, 1594
BstENI	CCTNNNNNAGG	1 cut(s)	831
BstF5I	GGATG	7 cut(s)	156, 546, 618, 697, 1311, 1557, 1666
BstFNI	CGCG	2 cut(s)	1082, 1223
BstHHI	GCGC	1 cut(s)	1075
BstKTI	GATC	3 cut(s)	652, 1483, 1993
BstMAI	GTCTC	2 cut(s)	369, 1818
BstMBI	GATC	3 cut(s)	649, 1480, 1990
BstMWI	GCNNNNNNNGC	8 cut(s)	195, 204, 1047, 1079, 1265, 1510, 1888, 1897
BstNI	CCWGG	3 cut(s)	89, 218, 1510
BstNSI	RCATGY	2 cut(s)	700, 998
BstSCI	CCNGG	9 cut(s)	87, 159, 160, 216, 477, 539, 549, 687, 1508
BstSFI	CTRYAG	1 cut(s)	1946
BstUI	CGCG	2 cut(s)	1082, 1223
BstV1I	GCAGC	8 cut(s)	2, 595, 1467, 1589, 1678, 1884, 1932, 1960
BstV2I	GAAGAC	2 cut(s)	215, 2002
BstX2I	RGATCY	1 cut(s)	649
BstXI	CCANNNNNNTGG	2 cut(s)	180, 350
BstYI	RGATCY	1 cut(s)	649
BsuI	GTATCC	2 cut(s)	341, 2019
BtgI	CCRYGG	3 cut(s)	1009, 1221, 1594
BtsCI	GGATG	7 cut(s)	156, 546, 618, 697, 1311, 1557, 1666
BtsIMutI	CAGTG	1 cut(s)	1974
Cac8I	GCNNGC	3 cut(s)	187, 895, 1077
CaiI	CAGNNNCTG	1 cut(s)	1945
CfoI	GCGC	1 cut(s)	1075
Cfr10I	RCCGGY	1 cut(s)	185
Cfr13I	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
Cfr42I	CCGCGG	1 cut(s)	1224
Cfr9I	CCCGGG	1 cut(s)	160
CseI	GACGC	1 cut(s)	178
Csp6I	GTAC	3 cut(s)	998, 1726, 2036
CviQI	GTAC	3 cut(s)	998, 1726, 2036
DdeI	CTNAG	4 cut(s)	201, 714, 1347, 1977
DpnI	GATC	3 cut(s)	651, 1482, 1992
DpnII	GATC	3 cut(s)	649, 1480, 1990
DraI	TTTAAA	1 cut(s)	631
DrdI	GACNNNNNNGTC	1 cut(s)	1090
DseDI	GACNNNNNNGTC	1 cut(s)	1090
EaeI	YGGCCR	3 cut(s)	141, 1095, 1875
Eam1104I	CTCTTC	4 cut(s)	38, 50, 1295, 1413
EarI	CTCTTC	4 cut(s)	38, 50, 1295, 1413
EciI	GGCGGA	2 cut(s)	762, 1241
Ecl136II	GAGCTC	1 cut(s)	356
Eco130I	CCWWGG	5 cut(s)	138, 298, 1395, 1534, 1594
Eco24I	GRGCYC	2 cut(s)	298, 358
Eco47I	GGWCC	2 cut(s)	710, 749
Eco53kI	GAGCTC	1 cut(s)	356
Eco88I	CYCGRG	4 cut(s)	160, 521, 593, 2030
EcoICRI	GAGCTC	1 cut(s)	356
EcoNI	CCTNNNNNAGG	1 cut(s)	831
EcoO109I	RGGNCCY	1 cut(s)	286
EcoRII	CCWGG	3 cut(s)	87, 216, 1508
EcoT14I	CCWWGG	5 cut(s)	138, 298, 1395, 1534, 1594
EcoT38I	GRGCYC	2 cut(s)	298, 358
ErhI	CCWWGG	5 cut(s)	138, 298, 1395, 1534, 1594
Esp3I	CGTCTC	1 cut(s)	1818
FalI	AAGNNNNNCTT	6 cut(s)	87, 119, 104, 136, 398, 430
FaqI	GGGAC	2 cut(s)	70, 1325
FauI	CCCGC	1 cut(s)	1133
FblI	GTMKAC	1 cut(s)	192
FokI	GGATG	7 cut(s)	143, 533, 605, 704, 1318, 1564, 1653
FriOI	GRGCYC	2 cut(s)	298, 358
FspBI	CTAG	4 cut(s)	653, 1325, 1611, 1901
FspI	TGCGCA	1 cut(s)	1074
GlaI	GCGC	1 cut(s)	1074
GsaI	CCCAGC	2 cut(s)	1686, 1741
GsuI	CTGGAG	1 cut(s)	215
HgaI	GACGC	1 cut(s)	178
HhaI	GCGC	1 cut(s)	1075
Hin1I	GRCGYC	1 cut(s)	189
Hin6I	GCGC	1 cut(s)	1073
HinP1I	GCGC	1 cut(s)	1073
HinfI	GANTC	8 cut(s)	482, 554, 638, 1118, 1372, 1390, 1733, 1928
HphI	GGTGA	9 cut(s)	115, 780, 786, 792, 798, 895, 931, 1186, 1490
Hpy166II	GTNNAC	3 cut(s)	193, 445, 1985
Hpy188I	TCNGA	6 cut(s)	293, 507, 1438, 1501, 1759, 1964
Hpy8I	GTNNAC	3 cut(s)	193, 445, 1985
Hpy99I	CGWCG	2 cut(s)	948, 1087
HpyAV	CCTTC	6 cut(s)	37, 67, 130, 728, 1120, 1350
HpyCH4III	ACNGT	3 cut(s)	786, 792, 798
HpyCH4IV	ACGT	2 cut(s)	1085, 1193
HpyF10VI	GCNNNNNNNGC	8 cut(s)	195, 204, 1047, 1079, 1265, 1510, 1888, 1897
HpyF3I	CTNAG	4 cut(s)	201, 714, 1347, 1977
HpySE526I	ACGT	2 cut(s)	1085, 1193
Hsp92I	GRCGYC	1 cut(s)	189
HspAI	GCGC	1 cut(s)	1073
Kpn2I	TCCGGA	1 cut(s)	611
KroI	GCCGGC	1 cut(s)	185
KroNI	GCCGGC	1 cut(s)	187
KspI	CCGCGG	1 cut(s)	1224
Kzo9I	GATC	3 cut(s)	649, 1480, 1990
LmnI	GCTCC	7 cut(s)	353, 511, 614, 991, 1046, 1501, 1964
Lsp1109I	GCAGC	8 cut(s)	2, 595, 1467, 1589, 1678, 1884, 1932, 1960
LweI	GCATC	3 cut(s)	219, 1333, 1932
MaeI	CTAG	4 cut(s)	653, 1325, 1611, 1901
MaeII	ACGT	2 cut(s)	1085, 1193
MaeIII	GTNAC	3 cut(s)	786, 792, 798
MalI	GATC	3 cut(s)	651, 1482, 1992
MboI	GATC	3 cut(s)	649, 1480, 1990
MboII	GAAGA	9 cut(s)	25, 37, 40, 215, 1156, 1312, 1377, 1430, 2007
MflI	RGATCY	1 cut(s)	649
MhlI	GDGCHC	2 cut(s)	298, 358
MlsI	TGGCCA	1 cut(s)	143
MluCI	AATT	6 cut(s)	385, 533, 927, 958, 1527, 1644
MluNI	TGGCCA	1 cut(s)	143
MlyI	GAGTC	2 cut(s)	1381, 1384
MmeI	TCCRAC	1 cut(s)	882
Mox20I	TGGCCA	1 cut(s)	143
MroI	TCCGGA	1 cut(s)	611
MroNI	GCCGGC	1 cut(s)	185
MscI	TGGCCA	1 cut(s)	143
MseI	TTAA	6 cut(s)	105, 434, 630, 1650, 1713, 1823
MslI	CAYNNNNRTG	1 cut(s)	178
Msp20I	TGGCCA	1 cut(s)	143
MspA1I	CMGCKG	1 cut(s)	1223
MspCI	CTTAAG	1 cut(s)	104
MspR9I	CCNGG	9 cut(s)	89, 161, 162, 218, 479, 541, 551, 689, 1510
Mva1269I	GAATGC	1 cut(s)	1153
MvaI	CCWGG	3 cut(s)	89, 218, 1510
MvnI	CGCG	2 cut(s)	1082, 1223
MwoI	GCNNNNNNNGC	8 cut(s)	195, 204, 1047, 1079, 1265, 1510, 1888, 1897
NaeI	GCCGGC	1 cut(s)	187
NciI	CCSGG	6 cut(s)	161, 162, 479, 541, 551, 689
NcoI	CCATGG	1 cut(s)	1594
NdeII	GATC	3 cut(s)	649, 1480, 1990
NgoMIV	GCCGGC	1 cut(s)	185
NlaIV	GGNNCC	4 cut(s)	153, 166, 544, 616
NmeAIII	GCCGAG	1 cut(s)	1903
NmuCI	GTSAC	3 cut(s)	786, 792, 798
NsbI	TGCGCA	1 cut(s)	1074
NspI	RCATGY	2 cut(s)	700, 998
PaeR7I	CTCGAG	3 cut(s)	521, 593, 2030
PciI	ACATGT	1 cut(s)	696
PctI	GAATGC	1 cut(s)	1153
PdiI	GCCGGC	1 cut(s)	187
PfeI	GAWTC	6 cut(s)	482, 554, 638, 1118, 1733, 1928
PflMI	CCANNNNNTGG	1 cut(s)	238
PfoI	TCCNGGA	3 cut(s)	477, 549, 687
PleI	GAGTC	2 cut(s)	1380, 1384
PpsI	GAGTC	2 cut(s)	1380, 1384
PscI	ACATGT	1 cut(s)	696
Psp124BI	GAGCTC	1 cut(s)	358
Psp6I	CCWGG	3 cut(s)	87, 216, 1508
PspFI	CCCAGC	2 cut(s)	1682, 1737
PspGI	CCWGG	3 cut(s)	87, 216, 1508
PspN4I	GGNNCC	4 cut(s)	153, 166, 544, 616
PspPI	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
PspXI	VCTCGAGB	1 cut(s)	2030
PstI	CTGCAG	1 cut(s)	1950
PstNI	CAGNNNCTG	1 cut(s)	1945
PsuI	RGATCY	1 cut(s)	649
RsaI	GTAC	3 cut(s)	999, 1727, 2037
RsaNI	GTAC	3 cut(s)	998, 1726, 2036
RseI	CAYNNNNRTG	1 cut(s)	178
SacI	GAGCTC	1 cut(s)	358
SacII	CCGCGG	1 cut(s)	1224
SaqAI	TTAA	6 cut(s)	105, 434, 630, 1650, 1713, 1823
Sau3AI	GATC	3 cut(s)	649, 1480, 1990
Sau96I	GGNCC	6 cut(s)	183, 241, 286, 543, 710, 749
SchI	GAGTC	2 cut(s)	1381, 1384
ScrFI	CCNGG	9 cut(s)	89, 161, 162, 218, 479, 541, 551, 689, 1510
SduI	GDGCHC	2 cut(s)	298, 358
SfaNI	GCATC	3 cut(s)	219, 1333, 1932
SfcI	CTRYAG	1 cut(s)	1946
Sfr274I	CTCGAG	3 cut(s)	521, 593, 2030
Sfr303I	CCGCGG	1 cut(s)	1224
SgrBI	CCGCGG	1 cut(s)	1224
SinI	GGWCC	2 cut(s)	710, 749
SlaI	CTCGAG	3 cut(s)	521, 593, 2030
SmaI	CCCGGG	1 cut(s)	162
SmiMI	CAYNNNNRTG	1 cut(s)	178
Sse9I	AATT	6 cut(s)	385, 533, 927, 958, 1527, 1644
SsiI	CCGC	8 cut(s)	19, 207, 747, 1080, 1140, 1221, 1223, 1226
SspI	AATATT	2 cut(s)	1618, 1820
SspMI	CTAG	4 cut(s)	653, 1325, 1611, 1901
SstI	GAGCTC	1 cut(s)	358
StyD4I	CCNGG	9 cut(s)	87, 159, 160, 216, 477, 539, 549, 687, 1508
StyI	CCWWGG	5 cut(s)	138, 298, 1395, 1534, 1594
TaaI	ACNGT	3 cut(s)	786, 792, 798
TaiI	ACGT	2 cut(s)	1088, 1196
TaqI	TCGA	7 cut(s)	264, 452, 522, 594, 1483, 1993, 2031
TaqII	GACCGA	1 cut(s)	578
TasI	AATT	6 cut(s)	385, 533, 927, 958, 1527, 1644
TatI	WGTACW	1 cut(s)	1725
TauI	GCSGC	5 cut(s)	21, 210, 1082, 1223, 1226
TfiI	GAWTC	6 cut(s)	482, 554, 638, 1118, 1733, 1928
Tru1I	TTAA	6 cut(s)	105, 434, 630, 1650, 1713, 1823
Tru9I	TTAA	6 cut(s)	105, 434, 630, 1650, 1713, 1823
TscAI	CASTG	1 cut(s)	1981
TseFI	GTSAC	3 cut(s)	786, 792, 798
TseI	GCWGC	8 cut(s)	15, 583, 1455, 1577, 1691, 1897, 1945, 1948
Tsp45I	GTSAC	3 cut(s)	786, 792, 798
TspGWI	ACGGA	1 cut(s)	961
TspMI	CCCGGG	1 cut(s)	160
TspRI	CASTG	1 cut(s)	1981
Van91I	CCANNNNNTGG	1 cut(s)	238
Vha464I	CTTAAG	1 cut(s)	104
VpaK11BI	GGWCC	2 cut(s)	710, 749
XagI	CCTNNNNNAGG	1 cut(s)	831
XapI	RAATTY	1 cut(s)	958
XbaI	TCTAGA	1 cut(s)	652
XceI	RCATGY	2 cut(s)	700, 998
XhoI	CTCGAG	3 cut(s)	521, 593, 2030
XmaI	CCCGGG	1 cut(s)	160
XmiI	GTMKAC	1 cut(s)	192
XspI	CTAG	4 cut(s)	653, 1325, 1611, 1901

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.