Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0015099

Physical Location & Seq

Genomic Coordinates Forward (+)

17805002 .. 17807729

Gene Structure 2728 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1220000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGGTCGCTGTTCGCTCGTTCCTCTTCCTCCTCATCTTCCTCTCCTCCACTCACCTCTCCCTCTCCTTGTCACAAGAACAAGAAGCTCTCTTGAAGCTCAAGAACTCTCTCTCTCCTGCAGACAATCCCTTGGACAACTGGGAACCAAACACCTCCCCGTGTAACGACAAATGGGCTGGGATTGTCTGCAACGAAGATGTCATCACTGGTCTCCATTTCCCCAACATGGGTCTCTCCGGAAATATTGACATCGATGCATTGAAAGACATTCCTACCCTCAGAACCATTAATATCATGAACAACAAATTCTCAGGTCCGATTCCAGATTTCCACAAGCTTGGTGCATTGAAATCCATGTTTTTAGCGGGAAATGACTTCTCCGGTGAAATCCCAAAAGACTACTTTTCCAATTTGACGTCGTTGAAGAAAATTTACATCAACGGTAACAATTTCACAGGAAAAATCCCAGAGTCATTGACCCAATTGACCAAGCTAGAACAACTTCACTTGGAGAAAAACCAATTCACAGGCCCTATCCCGGAGTTAAAATCAGAAGTATTGAACTCACTCGACTTTTCGAACAACAAACTACAAGGTCCTATCCCGGAAACCCTATCGAAATTCGACCCCAAGGCGTTTGAAGGAAACGAAGGACTATGTGGCGGGCCACTCAAGTCATCATGCAAGCCACCTCCAACACCGTCATCTCCTCCGCCAGAATCCCCATCAAAGTCACCACCCTCGGCGCCGCACTCGACTCCATCTAAGAAAGAGGAAGATAAAAGATCAAAAACCATAATCATAGTCATCAGTGTCATTGCCGCTATCATGGTTCTACTCCTGCTTTACGTGCTGCTCACAAAGAAGAGGCGAAAACCAGAGGACGATTTCAACGTGCTCGGCAAAGAACAGATCATGGATGACCATCGTAATGTACAGGAGCAGGTGGTTGACGTTCATGTTCCAAGCACCACAAATCGCAGCGTGAGAAGCACGAATGAGTCAAATCGTAGCATGGAGGTCAACCAAAGCAATAGCAGAAAAGGTGGCGGGGACTCGAAGAAGGGGTCGAATCATGGGAAAATCGGCATGAACGAGCTTTTGATGGTGAATGAGGAAAAGGGTACGTTTGGATTGCCGGATTTGATGAAGGCAGCGGCGGAGGTTTTGGGGAATGGAGGGTTGGGATCGGCTTACAAGGCGGTGATGTCTAATGGGTTTTCGGTGGTAGTGAAGAGGATGAGGGAGATGAATAGGTTGGGGAGAGATGGGTTTGATGCTGAGATGAGAAGGTTTGGAAGATTAAGCCACAAGAATATATTGACTCCTTTGGCTTACCATTATAGGAGAGAGGAGAAGCTGTTGATCTCAGAATACATTCCTAAGGGCAGCTTGCTATACGTTCTGCATGGTGATCGTGGAATTTCTCATTCGGAGCTGAACTGGTCAACCCGTCTGCAGATAATTCAAGGAATTGCATGTGGAATGGGATTCATCCACACAGAGTTTGCATCCTATGACCTGCCCCATGGAAACCTAAAGTCCAGCAACATTCTACTAAAAGAAGACTATGAGCCCGTGCTCAACGACTATGCCTTACATCCCCTCATAAACCCTAGCAATTCTGCACAATCCATGTTTGCTTTTAGGACCCCAGAGTACATAGAATCCCAGCAAATATCTCCGAAAGCCGATGTATACTGCCTTGGAATTGTGATCCTTGAAATCCTCACCGGGAAGTTCCCATCTCAGTATCTGAGCAACGGGAAAGGCGGAACCGACGTCGTTCAGTGGGTCCAATCAGCCATGGCTGAGCAAAGAGAACAAGAGTTGCTAGACCCAGAGATAGCAAGTGAGACAGATTCAGTGGATCAAATGCTGCAGCTTCTGATGGTTGGAGCTGATTGCACTACGAGTGAGCCTGAGCAAAGGCTTGATTTAAGGGAAGCCATTAGGAGGATTGAAGAGGTACGAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009856 GO:0009987 GO:0010183 GO:0010769 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022603 GO:0022604 GO:0030054 GO:0030427 GO:0032501 GO:0032502 GO:0035838 GO:0036211 GO:0040008 GO:0040011 GO:0042221 GO:0042330 GO:0042802 GO:0042995 GO:0043170 GO:0043412 GO:0043900 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044463 GO:0044464 GO:0044706 GO:0045595 GO:0048638 GO:0048856 GO:0048868 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0050918 GO:0051128 GO:0051239 GO:0051286 GO:0051510 GO:0051704 GO:0055044 GO:0060284 GO:0065007 GO:0071704 GO:0071944 GO:0080092 GO:0090404 GO:0090406 GO:0120025 GO:0120038 GO:0140096 GO:1901564 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

660

Amino Acids

73.13

Weight (kDa)

6.07

Isoelectric Point (pI)

47.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	24 - 64	7.6e-09	Leucine rich repeat N-terminal domain
LRR_8	PF13855	129 - 175	1.5e-07	Leucine rich repeat
PRIMA1	PF16101	228 - 293	8.4e-07	Proline-rich membrane anchor 1
PK_Tyr_Ser-Thr	PF07714	387 - 652	1.8e-25	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	388 - 651	1.9e-25	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015099)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42880 AT5G20690
fragaria_vesca	FvH4_1g09030
malus_domestica	MD02G1095500.v1.1 MD15G1220000.v1.1
prunus_persica	Prupe.7G195600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0095451
rosa_laevigata	RLG00000016568
rosa_multiflora	Rmu_co8386329.1_g000001
rosa_roxburghii	Rroxscaffold_2G00146330
rosa_rugosa	Rorug02G0051200.1
rosa_samantha	Rh2AG099200 Rh2BG100500 Rh2CG102600 Rh2DG100100
rosa_wichuraiana	Rw2G007510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	934
AatII	GACGTC	2 cut(s)	419, 1785
Acc36I	ACCTGC	2 cut(s)	934, 1530
AccB1I	GGYRCC	1 cut(s)	745
AccI	GTMKAC	1 cut(s)	1698
AccIII	TCCGGA	1 cut(s)	236
AclWI	GGATC	3 cut(s)	1195, 1711, 1878
AcsI	RAATTY	4 cut(s)	305, 429, 620, 1422
AcyI	GRCGYC	3 cut(s)	416, 746, 1782
AfaI	GTAC	4 cut(s)	936, 1126, 1661, 1971
AfiI	CCNNNNNNNGG	4 cut(s)	226, 227, 538, 1956
AjuI	GAANNNNNNNTTGG	2 cut(s)	1166, 1198
Alw21I	GWGCWC	2 cut(s)	900, 1584
Alw26I	GTCTC	3 cut(s)	215, 236, 1850
AlwI	GGATC	3 cut(s)	1195, 1711, 1878
AlwNI	CAGNNNCTG	2 cut(s)	1756, 1888
Aor13HI	TCCGGA	1 cut(s)	236
AoxI	GGCC	2 cut(s)	529, 665
ApeKI	GCWGC	6 cut(s)	853, 981, 1154, 1389, 1879, 1882
ApoI	RAATTY	4 cut(s)	305, 429, 620, 1422
ArsI	GACNNNNNNTTYG	2 cut(s)	1052, 1084
AseI	ATTAAT	1 cut(s)	288
Asp700I	GAANNNNTTC	2 cut(s)	501, 1377
AspLEI	GCGC	1 cut(s)	748
AspS9I	GGNCC	6 cut(s)	314, 530, 596, 665, 1650, 1795
AsuC2I	CCSGG	3 cut(s)	539, 605, 1735
AsuHPI	GGTGA	7 cut(s)	44, 395, 726, 1120, 1216, 1424, 1723
AsuII	TTCGAA	1 cut(s)	578
AvaII	GGWCC	4 cut(s)	314, 596, 1650, 1795
AxyI	CCTNAGG	1 cut(s)	1383
BanI	GGYRCC	1 cut(s)	745
BanII	GRGCYC	1 cut(s)	1578
BarI	GAAGNNNNNNTAC	2 cut(s)	416, 448
BbsI	GAAGAC	1 cut(s)	1572
Bbv12I	GWGCWC	2 cut(s)	900, 1584
BbvI	GCAGC	6 cut(s)	840, 993, 1166, 1401, 1866, 1894
BccI	CCATC	7 cut(s)	733, 769, 933, 1099, 1262, 1753, 1885
BcgI	CGANNNNNNTGC	2 cut(s)	1397, 1431
BcnI	CCSGG	3 cut(s)	539, 605, 1735
BcoDI	GTCTC	3 cut(s)	215, 236, 1850
BfaI	CTAG	3 cut(s)	494, 1617, 1835
BfmI	CTRYAG	3 cut(s)	117, 1457, 1880
BfoI	RGCGCY	1 cut(s)	749
BfuAI	ACCTGC	2 cut(s)	934, 1530
BisI	GCNGC	9 cut(s)	749, 822, 854, 982, 1155, 1158, 1390, 1880, 1883
BlpI	GCTNAGC	1 cut(s)	1812
BlsI	GCNGC	9 cut(s)	750, 823, 855, 983, 1156, 1159, 1391, 1881, 1884
Bme1390I	CCNGG	3 cut(s)	539, 605, 1735
Bme18I	GGWCC	4 cut(s)	314, 596, 1650, 1795
BmgT120I	GGNCC	6 cut(s)	314, 530, 596, 665, 1650, 1795
BmiI	GGNNCC	5 cut(s)	144, 747, 1652, 1777, 1796
BmrFI	CCNGG	3 cut(s)	539, 605, 1735
BmrI	ACTGGG	1 cut(s)	148
BmsI	GCATC	3 cut(s)	244, 1267, 1520
BmuI	ACTGGG	1 cut(s)	148
BpiI	GAAGAC	1 cut(s)	1572
Bpu10I	CCTNAGC	1 cut(s)	1923
Bpu1102I	GCTNAGC	1 cut(s)	1812
Bpu14I	TTCGAA	1 cut(s)	578
BpuEI	CTTGAG	2 cut(s)	83, 656
BpuMI	CCSGG	3 cut(s)	539, 605, 1735
Bsa29I	ATCGAT	1 cut(s)	252
BsaAI	YACGTR	1 cut(s)	850
BsaBI	GATNNNNATC	1 cut(s)	924
BsaHI	GRCGYC	3 cut(s)	416, 746, 1782
BsaI	GGTCTC	2 cut(s)	215, 236
BsaJI	CCNNGG	6 cut(s)	129, 630, 741, 1528, 1705, 1806
BsaWI	WCCGGW	2 cut(s)	236, 380
BsaXI	ACNNNNNCTCC	2 cut(s)	1346, 1376
Bsc4I	CCNNNNNNNGG	4 cut(s)	226, 227, 538, 1956
Bse1I	ACTGG	3 cut(s)	143, 211, 1448
Bse21I	CCTNAGG	1 cut(s)	1383
Bse3DI	GCAATG	1 cut(s)	816
Bse8I	GATNNNNATC	1 cut(s)	924
BseAI	TCCGGA	1 cut(s)	236
BseCI	ATCGAT	1 cut(s)	252
BseDI	CCNNGG	6 cut(s)	129, 630, 741, 1528, 1705, 1806
BseGI	GGATG	5 cut(s)	925, 1245, 1494, 1511, 1600
BseJI	GATNNNNATC	1 cut(s)	924
BseLI	CCNNNNNNNGG	4 cut(s)	226, 227, 538, 1956
BseMI	GCAATG	1 cut(s)	816
BseMII	CTCAG	8 cut(s)	292, 324, 1272, 1383, 1748, 1763, 1803, 1914
BseNI	ACTGG	3 cut(s)	143, 211, 1448
BseRI	GAGGAG	4 cut(s)	20, 34, 699, 1367
BseXI	GCAGC	6 cut(s)	840, 993, 1166, 1401, 1866, 1894
BseYI	CCCAGC	2 cut(s)	176, 1671
BsgI	GTGCAG	1 cut(s)	1611
BshFI	GGCC	2 cut(s)	531, 667
BshNI	GGYRCC	1 cut(s)	745
BshVI	ATCGAT	1 cut(s)	252
BsiHKAI	GWGCWC	2 cut(s)	900, 1584
BsiSI	CCGG	6 cut(s)	237, 381, 539, 605, 1139, 1734
BslFI	GGGAC	1 cut(s)	1067
BslI	CCNNNNNNNGG	4 cut(s)	226, 227, 538, 1956
BsmAI	GTCTC	3 cut(s)	215, 236, 1850
BsmFI	GGGAC	1 cut(s)	1067
BsnI	GGCC	2 cut(s)	531, 667
Bso31I	GGTCTC	2 cut(s)	215, 236
Bsp119I	TTCGAA	1 cut(s)	578
Bsp1286I	GDGCHC	3 cut(s)	900, 1578, 1584
Bsp13I	TCCGGA	1 cut(s)	236
Bsp1407I	TGTACA	1 cut(s)	934
Bsp143I	GATC	7 cut(s)	785, 912, 1187, 1365, 1414, 1716, 1870
Bsp1720I	GCTNAGC	1 cut(s)	1812
Bsp19I	CCATGG	2 cut(s)	1528, 1806
BspANI	GGCC	2 cut(s)	531, 667
BspCNI	CTCAG	8 cut(s)	291, 323, 1273, 1382, 1749, 1762, 1804, 1915
BspDI	ATCGAT	1 cut(s)	252
BspEI	TCCGGA	1 cut(s)	236
BspHI	TCATGA	1 cut(s)	294
BspLI	GGNNCC	5 cut(s)	144, 747, 1652, 1777, 1796
BspMAI	CTGCAG	3 cut(s)	121, 1461, 1884
BspMI	ACCTGC	2 cut(s)	934, 1530
BspPI	GGATC	3 cut(s)	1195, 1711, 1878
BspT104I	TTCGAA	1 cut(s)	578
BspT107I	GGYRCC	1 cut(s)	745
BspTNI	GGTCTC	2 cut(s)	215, 236
BsrDI	GCAATG	1 cut(s)	816
BsrGI	TGTACA	1 cut(s)	934
BsrI	ACTGG	3 cut(s)	143, 211, 1448
BssECI	CCNNGG	6 cut(s)	129, 630, 741, 1528, 1705, 1806
BssMI	GATC	7 cut(s)	785, 912, 1187, 1365, 1414, 1716, 1870
BssNAI	GTATAC	1 cut(s)	1699
BssNI	GRCGYC	3 cut(s)	416, 746, 1782
BssT1I	CCWWGG	5 cut(s)	129, 630, 1528, 1705, 1806
Bst1107I	GTATAC	1 cut(s)	1699
Bst4CI	ACNGT	2 cut(s)	443, 702
Bst6I	CTCTTC	4 cut(s)	29, 860, 1229, 1959
BstACI	GRCGYC	3 cut(s)	416, 746, 1782
BstAUI	TGTACA	1 cut(s)	934
BstBAI	YACGTR	1 cut(s)	850
BstBI	TTCGAA	1 cut(s)	578
BstC8I	GCNNGC	3 cut(s)	665, 686, 1394
BstDSI	CCRYGG	2 cut(s)	1528, 1806
BstF5I	GGATG	5 cut(s)	925, 1245, 1494, 1511, 1600
BstH2I	RGCGCY	1 cut(s)	749
BstHHI	GCGC	1 cut(s)	748
BstKTI	GATC	7 cut(s)	788, 915, 1190, 1368, 1417, 1719, 1873
BstMAI	GTCTC	3 cut(s)	215, 236, 1850
BstMBI	GATC	7 cut(s)	785, 912, 1187, 1365, 1414, 1716, 1870
BstMWI	GCNNNNNNNGC	3 cut(s)	850, 990, 1199
BstNSI	RCATGY	1 cut(s)	1482
BstSCI	CCNGG	3 cut(s)	537, 603, 1733
BstSFI	CTRYAG	3 cut(s)	117, 1457, 1880
BstV1I	GCAGC	6 cut(s)	840, 993, 1166, 1401, 1866, 1894
BstV2I	GAAGAC	1 cut(s)	1572
BstXI	CCANNNNNNTGG	1 cut(s)	338
BstZ17I	GTATAC	1 cut(s)	1699
Bsu15I	ATCGAT	1 cut(s)	252
Bsu36I	CCTNAGG	1 cut(s)	1383
BsuRI	GGCC	2 cut(s)	531, 667
BsuTUI	ATCGAT	1 cut(s)	252
BtgI	CCRYGG	2 cut(s)	1528, 1806
BtsCI	GGATG	5 cut(s)	925, 1245, 1494, 1511, 1600
BtsIMutI	CAGTG	4 cut(s)	204, 817, 1796, 1872
BveI	ACCTGC	2 cut(s)	934, 1530
Cac8I	GCNNGC	3 cut(s)	665, 686, 1394
CaiI	CAGNNNCTG	2 cut(s)	1756, 1888
CciI	TCATGA	1 cut(s)	294
CfoI	GCGC	1 cut(s)	748
Cfr13I	GGNCC	6 cut(s)	314, 530, 596, 665, 1650, 1795
ClaI	ATCGAT	1 cut(s)	252
Csp6I	GTAC	4 cut(s)	935, 1125, 1660, 1970
CviQI	GTAC	4 cut(s)	935, 1125, 1660, 1970
DinI	GGCGCC	1 cut(s)	747
DpnI	GATC	7 cut(s)	787, 914, 1189, 1367, 1416, 1718, 1872
DpnII	GATC	7 cut(s)	785, 912, 1187, 1365, 1414, 1716, 1870
Eam1104I	CTCTTC	4 cut(s)	29, 860, 1229, 1959
EarI	CTCTTC	4 cut(s)	29, 860, 1229, 1959
EciI	GGCGGA	3 cut(s)	702, 1175, 1788
Eco130I	CCWWGG	5 cut(s)	129, 630, 1528, 1705, 1806
Eco24I	GRGCYC	1 cut(s)	1578
Eco31I	GGTCTC	2 cut(s)	215, 236
Eco47I	GGWCC	4 cut(s)	314, 596, 1650, 1795
Eco81I	CCTNAGG	1 cut(s)	1383
EcoO109I	RGGNCCY	3 cut(s)	530, 596, 1650
EcoT14I	CCWWGG	5 cut(s)	129, 630, 1528, 1705, 1806
EcoT22I	ATGCAT	1 cut(s)	259
EcoT38I	GRGCYC	1 cut(s)	1578
EgeI	GGCGCC	1 cut(s)	747
EheI	GGCGCC	1 cut(s)	747
ErhI	CCWWGG	5 cut(s)	129, 630, 1528, 1705, 1806
FalI	AAGNNNNNCTT	2 cut(s)	1376, 1408
FaqI	GGGAC	1 cut(s)	1067
FauI	CCCGC	3 cut(s)	358, 656, 1043
FblI	GTMKAC	1 cut(s)	1698
Fnu4HI	GCNGC	9 cut(s)	749, 822, 854, 982, 1155, 1158, 1390, 1880, 1883
FokI	GGATG	5 cut(s)	932, 1252, 1481, 1498, 1587
FriOI	GRGCYC	1 cut(s)	1578
Fsp4HI	GCNGC	9 cut(s)	749, 822, 854, 982, 1155, 1158, 1390, 1880, 1883
FspBI	CTAG	3 cut(s)	494, 1617, 1835
GlaI	GCGC	1 cut(s)	747
GluI	GCNGC	9 cut(s)	749, 822, 854, 982, 1155, 1158, 1390, 1880, 1883
GsaI	CCCAGC	2 cut(s)	180, 1675
HaeII	RGCGCY	1 cut(s)	749
HaeIII	GGCC	2 cut(s)	531, 667
HapII	CCGG	6 cut(s)	237, 381, 539, 605, 1139, 1734
HhaI	GCGC	1 cut(s)	748
Hin1I	GRCGYC	3 cut(s)	416, 746, 1782
Hin6I	GCGC	1 cut(s)	746
HinP1I	GCGC	1 cut(s)	746
HincII	GTYRAC	3 cut(s)	952, 1024, 1449
HindII	GTYRAC	3 cut(s)	952, 1024, 1449
HindIII	AAGCTT	1 cut(s)	335
HpaII	CCGG	6 cut(s)	237, 381, 539, 605, 1139, 1734
HphI	GGTGA	7 cut(s)	44, 395, 726, 1120, 1216, 1424, 1723
Hpy166II	GTNNAC	4 cut(s)	952, 1024, 1449, 1699
Hpy188I	TCNGA	8 cut(s)	281, 318, 553, 1372, 1435, 1686, 1758, 1890
Hpy188III	TCNNGA	5 cut(s)	91, 100, 237, 295, 323
Hpy8I	GTNNAC	4 cut(s)	952, 1024, 1449, 1699
Hpy99I	CGWCG	3 cut(s)	421, 1784, 1787
HpyAV	CCTTC	5 cut(s)	635, 644, 1057, 1144, 1284
HpyCH4III	ACNGT	2 cut(s)	443, 702
HpyCH4IV	ACGT	7 cut(s)	416, 849, 894, 954, 1127, 1401, 1782
HpyF10VI	GCNNNNNNNGC	3 cut(s)	850, 990, 1199
HpySE526I	ACGT	7 cut(s)	416, 849, 894, 954, 1127, 1401, 1782
Hsp92I	GRCGYC	3 cut(s)	416, 746, 1782
HspAI	GCGC	1 cut(s)	746
KasI	GGCGCC	1 cut(s)	745
Kpn2I	TCCGGA	1 cut(s)	236
Kzo9I	GATC	7 cut(s)	785, 912, 1187, 1365, 1414, 1716, 1870
LmnI	GCTCC	3 cut(s)	940, 1435, 1898
Lsp1109I	GCAGC	6 cut(s)	840, 993, 1166, 1401, 1866, 1894
LweI	GCATC	3 cut(s)	244, 1267, 1520
MaeI	CTAG	3 cut(s)	494, 1617, 1835
MaeII	ACGT	7 cut(s)	416, 849, 894, 954, 1127, 1401, 1782
MaeIII	GTNAC	4 cut(s)	69, 161, 443, 732
MalI	GATC	7 cut(s)	787, 914, 1189, 1367, 1416, 1718, 1872
MboI	GATC	7 cut(s)	785, 912, 1187, 1365, 1414, 1716, 1870
MfeI	CAATTG	1 cut(s)	482
MhlI	GDGCHC	3 cut(s)	900, 1578, 1584
Mly113I	GGCGCC	1 cut(s)	746
MlyI	GAGTC	5 cut(s)	479, 751, 1010, 1049, 1318
MmeI	TCCRAC	2 cut(s)	719, 1876
Mph1103I	ATGCAT	1 cut(s)	259
MroI	TCCGGA	1 cut(s)	236
MroXI	GAANNNNTTC	2 cut(s)	501, 1377
MseI	TTAA	4 cut(s)	288, 545, 1304, 1940
MslI	CAYNNNNRTG	1 cut(s)	930
MspA1I	CMGCKG	1 cut(s)	1157
MspI	CCGG	6 cut(s)	237, 381, 539, 605, 1139, 1734
MspR9I	CCNGG	3 cut(s)	539, 605, 1735
MunI	CAATTG	1 cut(s)	482
MwoI	GCNNNNNNNGC	3 cut(s)	850, 990, 1199
NarI	GGCGCC	1 cut(s)	746
NciI	CCSGG	3 cut(s)	539, 605, 1735
NcoI	CCATGG	2 cut(s)	1528, 1806
NdeII	GATC	7 cut(s)	785, 912, 1187, 1365, 1414, 1716, 1870
NlaIV	GGNNCC	5 cut(s)	144, 747, 1652, 1777, 1796
NmeAIII	GCCGAG	2 cut(s)	722, 879
NmuCI	GTSAC	2 cut(s)	69, 732
NsiI	ATGCAT	1 cut(s)	259
NspI	RCATGY	1 cut(s)	1482
NspV	TTCGAA	1 cut(s)	578
PagI	TCATGA	1 cut(s)	294
PaqCI	CACCTGC	1 cut(s)	934
PcsI	WCGNNNNNNNCGW	2 cut(s)	891, 1092
PdmI	GAANNNNTTC	2 cut(s)	501, 1377
PfeI	GAWTC	6 cut(s)	319, 719, 1072, 1491, 1667, 1862
PfoI	TCCNGGA	2 cut(s)	537, 603
PkrI	GCNGC	9 cut(s)	750, 823, 855, 983, 1156, 1159, 1391, 1881, 1884
PleI	GAGTC	5 cut(s)	478, 751, 1009, 1049, 1318
PluTI	GGCGCC	1 cut(s)	749
PpsI	GAGTC	5 cut(s)	478, 751, 1009, 1049, 1318
Ppu21I	YACGTR	1 cut(s)	850
PpuMI	RGGWCCY	2 cut(s)	596, 1650
PshBI	ATTAAT	1 cut(s)	288
Psp5II	RGGWCCY	2 cut(s)	596, 1650
PspFI	CCCAGC	2 cut(s)	176, 1671
PspN4I	GGNNCC	5 cut(s)	144, 747, 1652, 1777, 1796
PspPI	GGNCC	6 cut(s)	314, 530, 596, 665, 1650, 1795
PspPPI	RGGWCCY	2 cut(s)	596, 1650
PstI	CTGCAG	3 cut(s)	121, 1461, 1884
PstNI	CAGNNNCTG	2 cut(s)	1756, 1888
RsaI	GTAC	4 cut(s)	936, 1126, 1661, 1971
RsaNI	GTAC	4 cut(s)	935, 1125, 1660, 1970
RseI	CAYNNNNRTG	1 cut(s)	930
SaqAI	TTAA	4 cut(s)	288, 545, 1304, 1940
SatI	GCNGC	9 cut(s)	749, 822, 854, 982, 1155, 1158, 1390, 1880, 1883
Sau3AI	GATC	7 cut(s)	785, 912, 1187, 1365, 1414, 1716, 1870
Sau96I	GGNCC	6 cut(s)	314, 530, 596, 665, 1650, 1795
SchI	GAGTC	5 cut(s)	479, 751, 1010, 1049, 1318
ScrFI	CCNGG	3 cut(s)	539, 605, 1735
SduI	GDGCHC	3 cut(s)	900, 1578, 1584
SfaNI	GCATC	3 cut(s)	244, 1267, 1520
SfcI	CTRYAG	3 cut(s)	117, 1457, 1880
SfoI	GGCGCC	1 cut(s)	747
SfuI	TTCGAA	1 cut(s)	578
SinI	GGWCC	4 cut(s)	314, 596, 1650, 1795
SmiMI	CAYNNNNRTG	1 cut(s)	930
SmlI	CTYRAG	2 cut(s)	98, 671
SmoI	CTYRAG	2 cut(s)	98, 671
SspDI	GGCGCC	1 cut(s)	745
SspI	AATATT	1 cut(s)	244
SspMI	CTAG	3 cut(s)	494, 1617, 1835
StyD4I	CCNGG	3 cut(s)	537, 603, 1733
StyI	CCWWGG	5 cut(s)	129, 630, 1528, 1705, 1806
TaaI	ACNGT	2 cut(s)	443, 702
TaiI	ACGT	7 cut(s)	419, 852, 897, 957, 1130, 1404, 1785
TaqI	TCGA	8 cut(s)	252, 570, 578, 617, 624, 755, 1058, 1070
TatI	WGTACW	2 cut(s)	934, 1659
TauI	GCSGC	3 cut(s)	751, 824, 1160
TfiI	GAWTC	6 cut(s)	319, 719, 1072, 1491, 1667, 1862
Tru1I	TTAA	4 cut(s)	288, 545, 1304, 1940
Tru9I	TTAA	4 cut(s)	288, 545, 1304, 1940
TscAI	CASTG	4 cut(s)	211, 817, 1796, 1872
TseFI	GTSAC	2 cut(s)	69, 732
TseI	GCWGC	6 cut(s)	853, 981, 1154, 1389, 1879, 1882
Tsp45I	GTSAC	2 cut(s)	69, 732
TspDTI	ATGAA	6 cut(s)	311, 947, 1106, 1163, 1265, 1483
TspRI	CASTG	4 cut(s)	211, 817, 1796, 1872
VpaK11BI	GGWCC	4 cut(s)	314, 596, 1650, 1795
VspI	ATTAAT	1 cut(s)	288
XapI	RAATTY	4 cut(s)	305, 429, 620, 1422
XceI	RCATGY	1 cut(s)	1482
XmiI	GTMKAC	1 cut(s)	1698
XmnI	GAANNNNTTC	2 cut(s)	501, 1377
XspI	CTAG	3 cut(s)	494, 1617, 1835
ZraI	GACGTC	2 cut(s)	417, 1783
Zsp2I	ATGCAT	1 cut(s)	259

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.