Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0011142

Physical Location & Seq

Genomic Coordinates Forward (+)

15690320 .. 15695304

Gene Structure 4985 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1177600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGAAGCTCTCGGCTTTGCACCAGAGCTACCTCACCCGACGGAGCAACAGCTTCAGGGGATCGGCGCCGTTGGACTCCACATCAGACGGCAAGTCGCCGGCGACGTTGTTCTGGCTTGTACTCCATGGCCTCTGCTGCCTCATCAGCCTCGTTCTTGGCTTCCGCTTCTCTCGCCTCGTCTTCTTCTTCCTCTTCTCCACCTCCTCTTCGAATCTCTATCCGGCGCCGTTTCGGACAGTTGCTGATCTCACCGTTAGAAACCTAGAGCTCCCCGCGAACCCGATCGCGAATCTCGAGTTTAATCTCAACAGGAACGCCACCACCGCGAGCTCCAGCAGCCGGGTCGTGGTCGGGCGGCACGGGATCCGAATCCGGCCCTGGCCGCACCCGAACCCGACCGAAACCATGAAGGCGCATCGCATAATTGAGACGGTTCAGAGGGAGCAGAGGAGGCAGTTCGGAGTCACCAACCCCAAAACGGTCATCGCCGTCACGCCCACCTATGCTCGGACTTTCCAGGCGCTACATTTGACTGGCGTTATGCACTCGCTAATGCTGGTCCCGTACAACGTCGTCTGGATCGTCGTTGAGGCCGGCGGGGTTACCAATGAGACGGCGTCGATTGTTTCCAAGTCCGGGCTCCGGATCATCCACGAGGGGTTTGATCAGCGGATGCCTAATACTTGGGATGGCCGCCACCTGCTGGAGGCTCGGATGCGGCTTCGTGCTTTGAGAATTGTGAGAGAGCAGAACCTGGACGGGATTGTTATGTTTGCAGACGATAGTAATATGCACAGTATGGAGCTTTTCGATGAGCTGCAGAATGTGAAATGGTTTGGTGCTGTTTCGGTGGGAATACTTGCTCATTCGGAGAATACAGATGAATCGTCAGAGTCCGCAATTGAGAAAAATGAGGAAGGGGAGTACCAGTCAATGCCAATTCAAGGTCCTGCTTGTAATTCATCCAATAAGTTGATTGGTTGGCACACCTTTAACACCTTGCCATATCTGGGAAAGAGGGCAAATTACATTGATGATCGAGCACCTGTACTACCCAGGAAGCTGGAGTGGGCTGGGTTTGTGTTGAATTCACGGTTGCTTTGGAGTGAAGCTGAAGATAAACCAGAGTGGGTTAATGATCTAGATAGTATTGGTGGGGCTGATGAGGAGATAGTGACCCCTCTATTCTTGTTGAAGGACCTGTCCATGGTTGAACCACTTGGAAATTGTGGGCGCCAAGTCTTGCTCTGGTGGCTCCGCGTTGAAGCTCGTTTCGATAGTAAATTTCCTCCCAGATGGACTATAGATCCTCCTTTGGAAATCACCGTACCATCGAAACGTACACCATGGCCTGATGCTCCTCCTGAACTCCCAGCTAATGAAAAAACAGAAACTGGAGTTGAAGAGCACACAGTGAAGCGTCCTGTAAAAATTCGTGCACCCAGAACAAAGAGAAGTCCTCGGAACAAGAGAAAGCACGAGACAAAAACGATTGACATGCAGGCTTCTGCAAGGCATACTGAACAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000271 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009791 GO:0009832 GO:0009834 GO:0009987 GO:0010051 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010383 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016763 GO:0022414 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0042285 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045491 GO:0045492 GO:0047517 GO:0048316 GO:0048354 GO:0048359 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0070589 GO:0070592 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_43

Protein Analysis

511

Amino Acids

57.81

Weight (kDa)

9.05

Isoelectric Point (pI)

51.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_43	PF03360	180 - 422	2.3e-48	Glycosyltransferase family 43

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36890 AT5G67230
fragaria_vesca	FvH4_1g16500
malus_domestica	MD02G1177600.v1.1 MD15G1287400.v1.1
prunus_persica	Prupe.6G230500_v2.0.a1
pyrus_communis	pycom02g14350 pycom02g14360 pycom15g25100
rosa_chinensis	RchiOBHm_Chr2g0106411
rosa_laevigata	RLG00000017496
rosa_multiflora	Rmu_sc0004015.1_g000001 Rmu_sc0016473.1_g000007
rosa_roxburghii	Rroxscaffold_2G00137210
rosa_rugosa	Rorug02G0135200
rosa_samantha	Rh2AG186400 Rh2BG196500 Rh2CG191400 Rh2DG192500
rosa_wichuraiana	Rw2G014520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	708
Acc36I	ACCTGC	1 cut(s)	708
AccB1I	GGYRCC	3 cut(s)	64, 223, 1233
AccB7I	CCANNNNNTGG	1 cut(s)	703
AccII	CGCG	4 cut(s)	275, 287, 326, 1260
AccIII	TCCGGA	1 cut(s)	642
AclWI	GGATC	6 cut(s)	67, 358, 371, 587, 653, 1301
AcoI	YGGCCR	2 cut(s)	380, 691
AcsI	RAATTY	3 cut(s)	1087, 1283, 1431
AcuI	CTGAAG	2 cut(s)	37, 1134
AcyI	GRCGYC	4 cut(s)	65, 224, 617, 1234
AdeI	CACNNNGTG	1 cut(s)	1414
AfaI	GTAC	6 cut(s)	120, 566, 926, 1050, 1329, 1342
AgsI	TTSAA	6 cut(s)	944, 1087, 1195, 1214, 1265, 1403
AhdI	GACNNNNNGTC	1 cut(s)	91
AjnI	CCWGG	4 cut(s)	377, 516, 753, 1055
Alw21I	GWGCWC	5 cut(s)	270, 332, 1045, 1410, 1441
Alw26I	GTCTC	3 cut(s)	422, 605, 1475
Alw44I	GTGCAC	1 cut(s)	1437
AlwI	GGATC	6 cut(s)	67, 358, 371, 587, 653, 1301
AlwNI	CAGNNNCTG	3 cut(s)	242, 754, 1394
Ama87I	CYCGRG	1 cut(s)	293
Aor13HI	TCCGGA	1 cut(s)	642
AoxI	GGCC	6 cut(s)	127, 374, 380, 591, 691, 1349
ApaLI	GTGCAC	1 cut(s)	1437
ApeKI	GCWGC	3 cut(s)	135, 336, 817
ApoI	RAATTY	3 cut(s)	1087, 1283, 1431
AspLEI	GCGC	5 cut(s)	67, 226, 415, 523, 1236
AspS9I	GGNCC	4 cut(s)	375, 559, 947, 1198
AsuC2I	CCSGG	2 cut(s)	341, 637
AsuHPI	GGTGA	4 cut(s)	25, 241, 457, 1315
AsuII	TTCGAA	1 cut(s)	209
AvaI	CYCGRG	1 cut(s)	293
AvaII	GGWCC	3 cut(s)	559, 947, 1198
BaeGI	GKGCMC	1 cut(s)	1441
BamHI	GGATCC	1 cut(s)	363
BanI	GGYRCC	3 cut(s)	64, 223, 1233
BanII	GRGCYC	3 cut(s)	270, 332, 642
BauI	CACGAG	2 cut(s)	653, 1478
BbsI	GAAGAC	1 cut(s)	172
Bbv12I	GWGCWC	5 cut(s)	270, 332, 1045, 1410, 1441
BbvI	GCAGC	3 cut(s)	122, 348, 804
BccI	CCATC	3 cut(s)	683, 1290, 1339
BceAI	ACGGC	5 cut(s)	52, 103, 211, 473, 630
BcgI	CGANNNNNNTGC	4 cut(s)	325, 359, 1480, 1514
BciT130I	CCWGG	4 cut(s)	379, 518, 755, 1057
BclI	TGATCA	1 cut(s)	664
BcnI	CCSGG	2 cut(s)	341, 637
BcoDI	GTCTC	3 cut(s)	422, 605, 1475
BfaI	CTAG	2 cut(s)	263, 1142
BfmI	CTRYAG	2 cut(s)	818, 1302
BfoI	RGCGCY	4 cut(s)	68, 227, 524, 1237
BfuAI	ACCTGC	1 cut(s)	708
BisI	GCNGC	7 cut(s)	136, 337, 356, 383, 694, 719, 818
BlsI	GCNGC	7 cut(s)	137, 338, 357, 384, 695, 720, 819
Bme1390I	CCNGG	6 cut(s)	341, 379, 518, 637, 755, 1057
Bme18I	GGWCC	3 cut(s)	559, 947, 1198
BmeRI	GACNNNNNGTC	1 cut(s)	91
BmeT110I	CYCGRG	1 cut(s)	293
BmgT120I	GGNCC	4 cut(s)	375, 559, 947, 1198
BmiI	GGNNCC	7 cut(s)	66, 225, 365, 561, 641, 1235, 1256
BmrFI	CCNGG	6 cut(s)	341, 379, 518, 637, 755, 1057
BmsI	GCATC	4 cut(s)	424, 663, 705, 1345
BpiI	GAAGAC	1 cut(s)	172
BplI	GAGNNNNNCTC	2 cut(s)	1444, 1476
BpmI	CTGGAG	4 cut(s)	316, 725, 1085, 1416
Bpu14I	TTCGAA	1 cut(s)	209
BpuMI	CCSGG	2 cut(s)	341, 637
BsaBI	GATNNNNATC	1 cut(s)	368
BsaHI	GRCGYC	4 cut(s)	65, 224, 617, 1234
BsaJI	CCNNGG	6 cut(s)	124, 377, 1055, 1206, 1346, 1460
BsaWI	WCCGGW	1 cut(s)	642
BsaXI	ACNNNNNCTCC	2 cut(s)	914, 944
Bse118I	RCCGGY	2 cut(s)	97, 593
Bse1I	ACTGG	3 cut(s)	538, 928, 1399
Bse8I	GATNNNNATC	1 cut(s)	368
BseAI	TCCGGA	1 cut(s)	642
BseBI	CCWGG	4 cut(s)	379, 518, 755, 1057
BseDI	CCNNGG	6 cut(s)	124, 377, 1055, 1206, 1346, 1460
BseGI	GGATG	5 cut(s)	648, 678, 694, 720, 962
BseJI	GATNNNNATC	1 cut(s)	368
BseNI	ACTGG	3 cut(s)	538, 928, 1399
BseRI	GAGGAG	4 cut(s)	193, 463, 1181, 1350
BseSI	GKGCMC	1 cut(s)	1441
BseXI	GCAGC	3 cut(s)	122, 348, 804
BseYI	CCCAGC	2 cut(s)	1073, 1372
Bsh1236I	CGCG	4 cut(s)	275, 287, 326, 1260
Bsh1285I	CGRYCG	2 cut(s)	285, 399
BshFI	GGCC	6 cut(s)	129, 376, 382, 593, 693, 1351
BshNI	GGYRCC	3 cut(s)	64, 223, 1233
BsiEI	CGRYCG	2 cut(s)	285, 399
BsiHKAI	GWGCWC	5 cut(s)	270, 332, 1045, 1410, 1441
BsiHKCI	CYCGRG	1 cut(s)	293
BsiSI	CCGG	7 cut(s)	98, 221, 340, 373, 594, 636, 643
BslFI	GGGAC	1 cut(s)	545
BsmAI	GTCTC	3 cut(s)	422, 605, 1475
BsmBI	CGTCTC	2 cut(s)	422, 605
BsmFI	GGGAC	1 cut(s)	545
BsnI	GGCC	6 cut(s)	129, 376, 382, 593, 693, 1351
BsoBI	CYCGRG	1 cut(s)	293
Bsp119I	TTCGAA	1 cut(s)	209
Bsp1286I	GDGCHC	6 cut(s)	270, 332, 642, 1045, 1410, 1441
Bsp13I	TCCGGA	1 cut(s)	642
Bsp19I	CCATGG	3 cut(s)	124, 1206, 1346
Bsp68I	TCGCGA	1 cut(s)	287
BspANI	GGCC	6 cut(s)	129, 376, 382, 593, 693, 1351
BspEI	TCCGGA	1 cut(s)	642
BspFNI	CGCG	4 cut(s)	275, 287, 326, 1260
BspLI	GGNNCC	7 cut(s)	66, 225, 365, 561, 641, 1235, 1256
BspMAI	CTGCAG	1 cut(s)	822
BspMI	ACCTGC	1 cut(s)	708
BspPI	GGATC	6 cut(s)	67, 358, 371, 587, 653, 1301
BspQI	GCTCTTC	1 cut(s)	1398
BspT104I	TTCGAA	1 cut(s)	209
BspT107I	GGYRCC	3 cut(s)	64, 223, 1233
BsrFI	RCCGGY	2 cut(s)	97, 593
BsrI	ACTGG	3 cut(s)	538, 928, 1399
BssAI	RCCGGY	2 cut(s)	97, 593
BssECI	CCNNGG	6 cut(s)	124, 377, 1055, 1206, 1346, 1460
BssNI	GRCGYC	4 cut(s)	65, 224, 617, 1234
BssSI	CACGAG	2 cut(s)	653, 1478
BssT1I	CCWWGG	3 cut(s)	124, 1206, 1346
Bst2BI	CACGAG	2 cut(s)	653, 1478
Bst2UI	CCWGG	4 cut(s)	379, 518, 755, 1057
Bst4CI	ACNGT	8 cut(s)	238, 253, 433, 481, 797, 1095, 1327, 1414
Bst6I	CTCTTC	3 cut(s)	197, 211, 1398
BstACI	GRCGYC	4 cut(s)	65, 224, 617, 1234
BstBI	TTCGAA	1 cut(s)	209
BstC8I	GCNNGC	4 cut(s)	99, 328, 595, 1503
BstDSI	CCRYGG	3 cut(s)	124, 1206, 1346
BstEII	GGTNACC	1 cut(s)	601
BstENI	CCTNNNNNAGG	1 cut(s)	704
BstF5I	GGATG	5 cut(s)	648, 678, 694, 720, 962
BstFNI	CGCG	4 cut(s)	275, 287, 326, 1260
BstH2I	RGCGCY	4 cut(s)	68, 227, 524, 1237
BstHHI	GCGC	5 cut(s)	67, 226, 415, 523, 1236
BstMAI	GTCTC	3 cut(s)	422, 605, 1475
BstMCI	CGRYCG	2 cut(s)	285, 399
BstMWI	GCNNNNNNNGC	8 cut(s)	135, 144, 171, 323, 336, 382, 451, 1252
BstNI	CCWGG	4 cut(s)	379, 518, 755, 1057
BstNSI	RCATGY	1 cut(s)	1501
BstPI	GGTNACC	1 cut(s)	601
BstSCI	CCNGG	6 cut(s)	339, 377, 516, 635, 753, 1055
BstSFI	CTRYAG	2 cut(s)	818, 1302
BstSLI	GKGCMC	1 cut(s)	1441
BstUI	CGCG	4 cut(s)	275, 287, 326, 1260
BstV1I	GCAGC	3 cut(s)	122, 348, 804
BstV2I	GAAGAC	1 cut(s)	172
BstX2I	RGATCY	2 cut(s)	363, 1306
BstXI	CCANNNNNNTGG	1 cut(s)	1063
BstYI	RGATCY	2 cut(s)	363, 1306
BsuRI	GGCC	6 cut(s)	129, 376, 382, 593, 693, 1351
BtgI	CCRYGG	3 cut(s)	124, 1206, 1346
BtgZI	GCGATG	2 cut(s)	401, 469
BtsCI	GGATG	5 cut(s)	648, 678, 694, 720, 962
BtsIMutI	CAGTG	1 cut(s)	1419
BtuMI	TCGCGA	1 cut(s)	287
BveI	ACCTGC	1 cut(s)	708
Cac8I	GCNNGC	4 cut(s)	99, 328, 595, 1503
CaiI	CAGNNNCTG	3 cut(s)	242, 754, 1394
CfoI	GCGC	5 cut(s)	67, 226, 415, 523, 1236
Cfr10I	RCCGGY	2 cut(s)	97, 593
Cfr13I	GGNCC	4 cut(s)	375, 559, 947, 1198
CseI	GACGC	2 cut(s)	606, 1409
Csp6I	GTAC	6 cut(s)	119, 565, 925, 1049, 1328, 1341
CviAII	CATG	5 cut(s)	125, 406, 1207, 1347, 1498
CviQI	GTAC	6 cut(s)	119, 565, 925, 1049, 1328, 1341
DinI	GGCGCC	3 cut(s)	66, 225, 1235
DraIII	CACNNNGTG	1 cut(s)	1414
DriI	GACNNNNNGTC	1 cut(s)	91
EaeI	YGGCCR	2 cut(s)	380, 691
Eam1104I	CTCTTC	3 cut(s)	197, 211, 1398
Eam1105I	GACNNNNNGTC	1 cut(s)	91
EarI	CTCTTC	3 cut(s)	197, 211, 1398
Ecl136II	GAGCTC	2 cut(s)	268, 330
Eco130I	CCWWGG	3 cut(s)	124, 1206, 1346
Eco24I	GRGCYC	3 cut(s)	270, 332, 642
Eco47I	GGWCC	3 cut(s)	559, 947, 1198
Eco53kI	GAGCTC	2 cut(s)	268, 330
Eco57I	CTGAAG	2 cut(s)	37, 1134
Eco88I	CYCGRG	1 cut(s)	293
Eco91I	GGTNACC	1 cut(s)	601
EcoICRI	GAGCTC	2 cut(s)	268, 330
EcoNI	CCTNNNNNAGG	1 cut(s)	704
EcoO109I	RGGNCCY	2 cut(s)	947, 1198
EcoO65I	GGTNACC	1 cut(s)	601
EcoRI	GAATTC	1 cut(s)	1087
EcoRII	CCWGG	4 cut(s)	377, 516, 753, 1055
EcoT14I	CCWWGG	3 cut(s)	124, 1206, 1346
EcoT38I	GRGCYC	3 cut(s)	270, 332, 642
EgeI	GGCGCC	3 cut(s)	66, 225, 1235
EheI	GGCGCC	3 cut(s)	66, 225, 1235
ErhI	CCWWGG	3 cut(s)	124, 1206, 1346
Esp3I	CGTCTC	2 cut(s)	422, 605
FaeI	CATG	5 cut(s)	128, 409, 1210, 1350, 1501
FaqI	GGGAC	1 cut(s)	545
FatI	CATG	5 cut(s)	124, 405, 1206, 1346, 1497
FauI	CCCGC	2 cut(s)	280, 590
FbaI	TGATCA	1 cut(s)	664
Fnu4HI	GCNGC	7 cut(s)	136, 337, 356, 383, 694, 719, 818
FokI	GGATG	5 cut(s)	635, 685, 701, 727, 949
FriOI	GRGCYC	3 cut(s)	270, 332, 642
Fsp4HI	GCNGC	7 cut(s)	136, 337, 356, 383, 694, 719, 818
FspBI	CTAG	2 cut(s)	263, 1142
GlaI	GCGC	5 cut(s)	66, 225, 414, 522, 1235
GluI	GCNGC	7 cut(s)	136, 337, 356, 383, 694, 719, 818
GsaI	CCCAGC	2 cut(s)	1077, 1376
GsuI	CTGGAG	4 cut(s)	316, 725, 1085, 1416
HaeII	RGCGCY	4 cut(s)	68, 227, 524, 1237
HaeIII	GGCC	6 cut(s)	129, 376, 382, 593, 693, 1351
HapII	CCGG	7 cut(s)	98, 221, 340, 373, 594, 636, 643
HgaI	GACGC	2 cut(s)	606, 1409
HhaI	GCGC	5 cut(s)	67, 226, 415, 523, 1236
Hin1I	GRCGYC	4 cut(s)	65, 224, 617, 1234
Hin1II	CATG	5 cut(s)	128, 409, 1210, 1350, 1501
Hin6I	GCGC	5 cut(s)	65, 224, 413, 521, 1234
HinP1I	GCGC	5 cut(s)	65, 224, 413, 521, 1234
HinfI	GANTC	7 cut(s)	74, 211, 289, 369, 462, 884, 893
HpaII	CCGG	7 cut(s)	98, 221, 340, 373, 594, 636, 643
HphI	GGTGA	4 cut(s)	25, 241, 457, 1315
Hpy166II	GTNNAC	2 cut(s)	1343, 1439
Hpy188III	TCNNGA	6 cut(s)	286, 293, 577, 643, 1142, 1364
Hpy8I	GTNNAC	2 cut(s)	1343, 1439
Hpy99I	CGWCG	5 cut(s)	42, 106, 575, 587, 622
HpyAV	CCTTC	3 cut(s)	403, 911, 1189
HpyCH4III	ACNGT	8 cut(s)	238, 253, 433, 481, 797, 1095, 1327, 1414
HpyCH4IV	ACGT	3 cut(s)	104, 570, 1339
HpyCH4V	TGCA	8 cut(s)	19, 544, 776, 793, 820, 1439, 1501, 1511
HpyF10VI	GCNNNNNNNGC	8 cut(s)	135, 144, 171, 323, 336, 382, 451, 1252
HpySE526I	ACGT	3 cut(s)	104, 570, 1339
Hsp92I	GRCGYC	4 cut(s)	65, 224, 617, 1234
Hsp92II	CATG	5 cut(s)	128, 409, 1210, 1350, 1501
HspAI	GCGC	5 cut(s)	65, 224, 413, 521, 1234
KasI	GGCGCC	3 cut(s)	64, 223, 1233
Kpn2I	TCCGGA	1 cut(s)	642
KroI	GCCGGC	2 cut(s)	97, 593
KroNI	GCCGGC	2 cut(s)	99, 595
Ksp22I	TGATCA	1 cut(s)	664
LguI	GCTCTTC	1 cut(s)	1398
LmnI	GCTCC	8 cut(s)	42, 273, 335, 442, 645, 802, 1260, 1363
Lsp1109I	GCAGC	3 cut(s)	122, 348, 804
LweI	GCATC	4 cut(s)	424, 663, 705, 1345
MaeI	CTAG	2 cut(s)	263, 1142
MaeII	ACGT	3 cut(s)	104, 570, 1339
MaeIII	GTNAC	4 cut(s)	463, 490, 601, 1174
MboII	GAAGA	7 cut(s)	172, 175, 178, 184, 198, 1127, 1415
MfeI	CAATTG	1 cut(s)	900
MflI	RGATCY	2 cut(s)	363, 1306
MhlI	GDGCHC	6 cut(s)	270, 332, 642, 1045, 1410, 1441
Mly113I	GGCGCC	3 cut(s)	65, 224, 1234
MlyI	GAGTC	3 cut(s)	68, 471, 902
MmeI	TCCRAC	1 cut(s)	51
MreI	CGCCGGCG	1 cut(s)	97
MroI	TCCGGA	1 cut(s)	642
MroNI	GCCGGC	2 cut(s)	97, 593
MseI	TTAA	3 cut(s)	300, 993, 1134
MspA1I	CMGCKG	1 cut(s)	670
MspI	CCGG	7 cut(s)	98, 221, 340, 373, 594, 636, 643
MspR9I	CCNGG	6 cut(s)	341, 379, 518, 637, 755, 1057
MunI	CAATTG	1 cut(s)	900
MvaI	CCWGG	4 cut(s)	379, 518, 755, 1057
MvnI	CGCG	4 cut(s)	275, 287, 326, 1260
MwoI	GCNNNNNNNGC	8 cut(s)	135, 144, 171, 323, 336, 382, 451, 1252
NaeI	GCCGGC	2 cut(s)	99, 595
NarI	GGCGCC	3 cut(s)	65, 224, 1234
NciI	CCSGG	2 cut(s)	341, 637
NcoI	CCATGG	3 cut(s)	124, 1206, 1346
NgoMIV	GCCGGC	2 cut(s)	97, 593
NlaIII	CATG	5 cut(s)	128, 409, 1210, 1350, 1501
NlaIV	GGNNCC	7 cut(s)	66, 225, 365, 561, 641, 1235, 1256
NmuCI	GTSAC	3 cut(s)	463, 490, 1174
NruI	TCGCGA	1 cut(s)	287
NspI	RCATGY	1 cut(s)	1501
NspV	TTCGAA	1 cut(s)	209
PaeR7I	CTCGAG	1 cut(s)	293
PaqCI	CACCTGC	1 cut(s)	708
PciSI	GCTCTTC	1 cut(s)	1398
PcsI	WCGNNNNNNNCGW	3 cut(s)	101, 291, 579
PdiI	GCCGGC	2 cut(s)	99, 595
PfeI	GAWTC	4 cut(s)	211, 289, 369, 884
PflFI	GACNNNGTC	1 cut(s)	616
PflMI	CCANNNNNTGG	1 cut(s)	703
PkrI	GCNGC	7 cut(s)	137, 338, 357, 384, 695, 720, 819
Ple19I	CGATCG	1 cut(s)	285
PleI	GAGTC	3 cut(s)	68, 470, 901
PluTI	GGCGCC	3 cut(s)	68, 227, 1237
PpsI	GAGTC	3 cut(s)	68, 470, 901
PpuMI	RGGWCCY	2 cut(s)	947, 1198
Psp124BI	GAGCTC	2 cut(s)	270, 332
Psp5II	RGGWCCY	2 cut(s)	947, 1198
Psp6I	CCWGG	4 cut(s)	377, 516, 753, 1055
PspEI	GGTNACC	1 cut(s)	601
PspFI	CCCAGC	2 cut(s)	1073, 1372
PspGI	CCWGG	4 cut(s)	377, 516, 753, 1055
PspN4I	GGNNCC	7 cut(s)	66, 225, 365, 561, 641, 1235, 1256
PspPI	GGNCC	4 cut(s)	375, 559, 947, 1198
PspPPI	RGGWCCY	2 cut(s)	947, 1198
PstI	CTGCAG	1 cut(s)	822
PstNI	CAGNNNCTG	3 cut(s)	242, 754, 1394
PsuI	RGATCY	2 cut(s)	363, 1306
PsyI	GACNNNGTC	1 cut(s)	616
PvuI	CGATCG	1 cut(s)	285
RruI	TCGCGA	1 cut(s)	287
RsaI	GTAC	6 cut(s)	120, 566, 926, 1050, 1329, 1342
RsaNI	GTAC	6 cut(s)	119, 565, 925, 1049, 1328, 1341
SacI	GAGCTC	2 cut(s)	270, 332
SapI	GCTCTTC	1 cut(s)	1398
SaqAI	TTAA	3 cut(s)	300, 993, 1134
SatI	GCNGC	7 cut(s)	136, 337, 356, 383, 694, 719, 818
Sau96I	GGNCC	4 cut(s)	375, 559, 947, 1198
SchI	GAGTC	3 cut(s)	68, 471, 902
ScrFI	CCNGG	6 cut(s)	341, 379, 518, 637, 755, 1057
SduI	GDGCHC	6 cut(s)	270, 332, 642, 1045, 1410, 1441
SfaNI	GCATC	4 cut(s)	424, 663, 705, 1345
SfcI	CTRYAG	2 cut(s)	818, 1302
SfoI	GGCGCC	3 cut(s)	66, 225, 1235
Sfr274I	CTCGAG	1 cut(s)	293
SfuI	TTCGAA	1 cut(s)	209
SgrAI	CRCCGGYG	1 cut(s)	97
SinI	GGWCC	3 cut(s)	559, 947, 1198
SlaI	CTCGAG	1 cut(s)	293
SmlI	CTYRAG	1 cut(s)	293
SmoI	CTYRAG	1 cut(s)	293
SspDI	GGCGCC	3 cut(s)	64, 223, 1233
SspMI	CTAG	2 cut(s)	263, 1142
SstI	GAGCTC	2 cut(s)	270, 332
StyD4I	CCNGG	6 cut(s)	339, 377, 516, 635, 753, 1055
StyI	CCWWGG	3 cut(s)	124, 1206, 1346
TaaI	ACNGT	8 cut(s)	238, 253, 433, 481, 797, 1095, 1327, 1414
TaiI	ACGT	3 cut(s)	107, 573, 1342
TaqI	TCGA	7 cut(s)	209, 294, 620, 810, 1039, 1275, 1334
TaqII	GACCGA	1 cut(s)	413
TatI	WGTACW	2 cut(s)	118, 1048
TauI	GCSGC	4 cut(s)	358, 385, 696, 721
TfiI	GAWTC	4 cut(s)	211, 289, 369, 884
Tru1I	TTAA	3 cut(s)	300, 993, 1134
Tru9I	TTAA	3 cut(s)	300, 993, 1134
TscAI	CASTG	1 cut(s)	1419
TseFI	GTSAC	3 cut(s)	463, 490, 1174
TseI	GCWGC	3 cut(s)	135, 336, 817
Tsp45I	GTSAC	3 cut(s)	463, 490, 1174
TspDTI	ATGAA	5 cut(s)	17, 422, 897, 951, 1395
TspGWI	ACGGA	1 cut(s)	55
TspRI	CASTG	1 cut(s)	1419
Tth111I	GACNNNGTC	1 cut(s)	616
Van91I	CCANNNNNTGG	1 cut(s)	703
VneI	GTGCAC	1 cut(s)	1437
VpaK11BI	GGWCC	3 cut(s)	559, 947, 1198
XagI	CCTNNNNNAGG	1 cut(s)	704
XapI	RAATTY	3 cut(s)	1087, 1283, 1431
XbaI	TCTAGA	1 cut(s)	1141
XceI	RCATGY	1 cut(s)	1501
XhoI	CTCGAG	1 cut(s)	293
XspI	CTAG	2 cut(s)	263, 1142

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.