Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0011142

Physical Location & Seq

Genomic Coordinates Reverse (-)

74930444 .. 74934824

Gene Structure 4381 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00137210.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGAAGCTCTCGGCGTTGCCTCAGAGCTACCTGAACCGCCGCAGCTTCAGGGGATCGGGGCCGTTGGATTCGTCTTCAGACGGCGGGATTAAGTCGCCGGCGACGGTGTTCTGGCTTGTGCTACATGGACTCTGCTGCTTGATTAGTCTGGTTCTTGGATTCCGCTTCTCTCGCCTTGTGTTTTTCTTCTTGTTCTCTACATCCTCGACGAATCTATACTCGGTGCCGTTTCGGTCGGCGTCCGAGCTCATCGGAACCCTAGACATCCCCGCCATTTCGAATCCGGTCGCGGATCGCCACTTCCAGCTCAACCGGAGCTCCACGACCTCCGGGAGCTCCAGCAGCCGCGTCGTCGTCGGCCGGCACGGGATCCGAATCCGGCCGTGGCCGCACCCGAACCCGACGGAGACGATGAAGGCGCACCGGATAATCGAGACGGTTCAGAGGGAGCAGAGGAGGCAGTTCGGGGTCAACAACCCGAGGAAGGTCATTGCGGTGACGCCGACGTATGCTCGGACCTTCCAGGCGCTACATTTGACCGGAGTTATGCACTCGCTTATGCTTGTACCTTACGACGTCGTTTGGATCGTGGTTGAGGCCGGTGGGGTTACTAATGAGACGGCTTCTATTATTTCCAAGTCGGGGCTTAACATTACTCACATTGGCTTGGATCAGCGAATGCCTAATACTTGGGATGGTCGCCACCGCTTGGAGGCTCGGATGCGGCTTCGTGCTTTGAGAGTTGTGAGAGAACAGAAGTTGGATGGGATTGTGATGTTTGCAGATGATAGTAATATGCACAGTATGGAGCTTTTCGATGAGATACAGAATGTGAAATGGTTTGGTGCTGTTTCGGTTGGAATACTTGCTCATTCGGATAATACAGATGGATCGTCTGAGTCTGTGATTCAGAGCAAGGAGGAGGAGGGGGAGAATCCAATAATGCCTATTCAAGGTCCTGCTTGTAACTCATCCAATAAGTTGGTTGGTTGGCACACCTTTAATGCATTGCCGTATGTGGGAAAGAGCGCAAATTATATTGATGACAGAGCGCCTGTGCTACCACGGAAGCTGGAGTGGGCTGGGTTTGTGTTGAACTCCCAGTTGCTTTGGGGTGAAGCTGAAGATAAACCAGAGTGGGTTAATGACCTAGATACTTTAGGTGGGGCTGATGAGGTTATAGAGAGCCCTCTATTCTTGTTGAAGGACTCGTCTATGGTCGAGCCACTTGGAAGTTGTGGACGCCAAGTTTTGTTGTGGTGGCTACGCGTTGAAGCCCGTTACGATAGTAAATTTCCTGCCAGATGGACAATTGATCCTCCTTTGGAAATCACTGTACCATCAAAACGTACGCCATGGCCGGATGCTCCTCCAGAACTCCCATCTAGTGGAAAAGTAGAGATCAATAGAGTCGAAGAGCATACAGTGAAACGCACAACAAAAATTCGAGCACCCAGATCAAAGAGAAGTTCTCGAAGCAAGAGAAAGCATGAGACAAAAACGACAGACGTGCAAGCTTCTGCAAGGCATACCGAACAAATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000139 GO:0000271 GO:0003002 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009059 GO:0009791 GO:0009832 GO:0009834 GO:0009987 GO:0010051 GO:0010154 GO:0010191 GO:0010192 GO:0010214 GO:0010383 GO:0010410 GO:0010413 GO:0010417 GO:0012505 GO:0016020 GO:0016051 GO:0016740 GO:0016757 GO:0016763 GO:0022414 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0042285 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045491 GO:0045492 GO:0047517 GO:0048316 GO:0048354 GO:0048359 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0070589 GO:0070592 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_43

Protein Analysis

514

Amino Acids

57.65

Weight (kDa)

9.34

Isoelectric Point (pI)

54.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_43	PF03360	182 - 425	1.3e-49	Glycosyltransferase family 43

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36890 AT5G67230
fragaria_vesca	FvH4_1g16500
malus_domestica	MD02G1177600.v1.1 MD15G1287400.v1.1
prunus_persica	Prupe.6G230500_v2.0.a1
pyrus_communis	pycom02g14350 pycom02g14360 pycom15g25100
rosa_chinensis	RchiOBHm_Chr2g0106411
rosa_laevigata	RLG00000017496
rosa_multiflora	Rmu_sc0004015.1_g000001 Rmu_sc0016473.1_g000007
rosa_roxburghii	Rroxscaffold_2G00137210
rosa_rugosa	Rorug02G0135200
rosa_samantha	Rh2AG186400 Rh2BG196500 Rh2CG191400 Rh2DG192500
rosa_wichuraiana	Rw2G014520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	579
AccB1I	GGYRCC	1 cut(s)	223
AccB7I	CCANNNNNTGG	2 cut(s)	709, 1388
AccII	CGCG	3 cut(s)	290, 348, 1269
AclWI	GGATC	8 cut(s)	61, 300, 364, 377, 593, 678, 898, 1310
AcoI	YGGCCR	4 cut(s)	358, 380, 386, 1358
AcsI	RAATTY	2 cut(s)	1292, 1443
AcuI	CTGAAG	3 cut(s)	31, 60, 1143
AcyI	GRCGYC	4 cut(s)	239, 500, 576, 1243
AfaI	GTAC	3 cut(s)	567, 1338, 1351
AfiI	CCNNNNNNNGG	7 cut(s)	484, 642, 709, 712, 953, 1019, 1388
AflIII	ACRYGT	1 cut(s)	1267
AgsI	TTSAA	4 cut(s)	953, 1096, 1204, 1274
AjiI	CACGTC	1 cut(s)	1510
AjnI	CCWGG	1 cut(s)	522
Alw21I	GWGCWC	4 cut(s)	249, 320, 338, 1453
Alw26I	GTCTC	4 cut(s)	401, 428, 611, 1487
AlwI	GGATC	8 cut(s)	61, 300, 364, 377, 593, 678, 898, 1310
Ama87I	CYCGRG	1 cut(s)	478
AoxI	GGCC	6 cut(s)	59, 358, 380, 386, 597, 1358
ApeKI	GCWGC	3 cut(s)	42, 135, 342
ApoI	RAATTY	2 cut(s)	1292, 1443
AspLEI	GCGC	4 cut(s)	421, 529, 1031, 1054
AspS9I	GGNCC	3 cut(s)	59, 516, 956
AsuC2I	CCSGG	1 cut(s)	331
AsuHPI	GGTGA	2 cut(s)	508, 1127
AsuII	TTCGAA	1 cut(s)	278
AvaI	CYCGRG	1 cut(s)	478
AvaII	GGWCC	2 cut(s)	516, 956
BamHI	GGATCC	1 cut(s)	369
BanI	GGYRCC	1 cut(s)	223
BanII	GRGCYC	4 cut(s)	249, 320, 338, 1190
BbsI	GAAGAC	1 cut(s)	66
Bbv12I	GWGCWC	4 cut(s)	249, 320, 338, 1453
BbvI	GCAGC	3 cut(s)	54, 122, 354
BccI	CCATC	6 cut(s)	689, 758, 881, 1299, 1348, 1390
BceAI	ACGGC	6 cut(s)	46, 97, 211, 367, 636, 997
BcgI	CGANNNNNNTGC	4 cut(s)	331, 365, 1492, 1526
BciT130I	CCWGG	1 cut(s)	524
BcnI	CCSGG	1 cut(s)	331
BcoDI	GTCTC	4 cut(s)	401, 428, 611, 1487
BfaI	CTAG	3 cut(s)	260, 1151, 1386
BfoI	RGCGCY	2 cut(s)	530, 1055
BisI	GCNGC	7 cut(s)	40, 43, 136, 343, 346, 389, 725
BlsI	GCNGC	7 cut(s)	41, 44, 137, 344, 347, 390, 726
Bme1390I	CCNGG	2 cut(s)	331, 524
Bme18I	GGWCC	2 cut(s)	516, 956
BmeT110I	CYCGRG	1 cut(s)	478
BmgBI	CACGTC	1 cut(s)	1510
BmgT120I	GGNCC	3 cut(s)	59, 516, 956
BmiI	GGNNCC	4 cut(s)	60, 225, 256, 371
BmrFI	CCNGG	2 cut(s)	331, 524
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	2 cut(s)	711, 1354
BmuI	ACTGGG	1 cut(s)	1096
BpiI	GAAGAC	1 cut(s)	66
BplI	GAGNNNNNCTC	2 cut(s)	1456, 1488
BpmI	CTGGAG	3 cut(s)	322, 1094, 1356
Bpu14I	TTCGAA	1 cut(s)	278
BpuMI	CCSGG	1 cut(s)	331
BsaBI	GATNNNNATC	1 cut(s)	374
BsaHI	GRCGYC	4 cut(s)	239, 500, 576, 1243
BsaJI	CCNNGG	4 cut(s)	383, 479, 1064, 1355
BsaWI	WCCGGW	4 cut(s)	283, 312, 423, 539
BsaXI	ACNNNNNCTCC	2 cut(s)	302, 332
Bsc4I	CCNNNNNNNGG	7 cut(s)	484, 642, 709, 712, 953, 1019, 1388
Bse118I	RCCGGY	3 cut(s)	97, 360, 599
Bse1I	ACTGG	1 cut(s)	1102
Bse3DI	GCAATG	2 cut(s)	489, 1007
Bse8I	GATNNNNATC	1 cut(s)	374
BseBI	CCWGG	1 cut(s)	524
BseDI	CCNNGG	4 cut(s)	383, 479, 1064, 1355
BseGI	GGATG	7 cut(s)	200, 264, 700, 726, 769, 971, 1369
BseJI	GATNNNNATC	1 cut(s)	374
BseLI	CCNNNNNNNGG	7 cut(s)	484, 642, 709, 712, 953, 1019, 1388
BseMI	GCAATG	2 cut(s)	489, 1007
BseMII	CTCAG	2 cut(s)	35, 888
BseNI	ACTGG	1 cut(s)	1102
BseRI	GAGGAG	4 cut(s)	469, 935, 938, 1359
BseX3I	CGGCCG	2 cut(s)	358, 380
BseXI	GCAGC	3 cut(s)	54, 122, 354
BseYI	CCCAGC	1 cut(s)	1082
Bsh1236I	CGCG	3 cut(s)	290, 348, 1269
Bsh1285I	CGRYCG	4 cut(s)	236, 288, 361, 383
BshFI	GGCC	6 cut(s)	61, 360, 382, 388, 599, 1360
BshNI	GGYRCC	1 cut(s)	223
BsiEI	CGRYCG	4 cut(s)	236, 288, 361, 383
BsiHKAI	GWGCWC	4 cut(s)	249, 320, 338, 1453
BsiHKCI	CYCGRG	1 cut(s)	478
BsiWI	CGTACG	1 cut(s)	1349
BslI	CCNNNNNNNGG	7 cut(s)	484, 642, 709, 712, 953, 1019, 1388
BsmAI	GTCTC	4 cut(s)	401, 428, 611, 1487
BsmBI	CGTCTC	3 cut(s)	401, 428, 611
BsmI	GAATGC	1 cut(s)	684
BsnI	GGCC	6 cut(s)	61, 360, 382, 388, 599, 1360
BsoBI	CYCGRG	1 cut(s)	478
Bsp119I	TTCGAA	1 cut(s)	278
Bsp1286I	GDGCHC	5 cut(s)	249, 320, 338, 1190, 1453
Bsp143I	GATC	9 cut(s)	53, 292, 369, 585, 670, 890, 1315, 1401, 1457
Bsp19I	CCATGG	1 cut(s)	1355
BspANI	GGCC	6 cut(s)	61, 360, 382, 388, 599, 1360
BspCNI	CTCAG	2 cut(s)	34, 889
BspFNI	CGCG	3 cut(s)	290, 348, 1269
BspLI	GGNNCC	4 cut(s)	60, 225, 256, 371
BspPI	GGATC	8 cut(s)	61, 300, 364, 377, 593, 678, 898, 1310
BspQI	GCTCTTC	1 cut(s)	1410
BspT104I	TTCGAA	1 cut(s)	278
BspT107I	GGYRCC	1 cut(s)	223
BsrDI	GCAATG	2 cut(s)	489, 1007
BsrFI	RCCGGY	3 cut(s)	97, 360, 599
BsrI	ACTGG	1 cut(s)	1102
BssAI	RCCGGY	3 cut(s)	97, 360, 599
BssECI	CCNNGG	4 cut(s)	383, 479, 1064, 1355
BssMI	GATC	9 cut(s)	53, 292, 369, 585, 670, 890, 1315, 1401, 1457
BssNI	GRCGYC	4 cut(s)	239, 500, 576, 1243
BssT1I	CCWWGG	1 cut(s)	1355
Bst2UI	CCWGG	1 cut(s)	524
Bst4CI	ACNGT	5 cut(s)	106, 439, 803, 1336, 1426
Bst6I	CTCTTC	1 cut(s)	1410
BstACI	GRCGYC	4 cut(s)	239, 500, 576, 1243
BstBI	TTCGAA	1 cut(s)	278
BstC8I	GCNNGC	3 cut(s)	99, 362, 1515
BstDEI	CTNAG	2 cut(s)	21, 897
BstDSI	CCRYGG	3 cut(s)	383, 1064, 1355
BstENI	CCTNNNNNAGG	1 cut(s)	951
BstF5I	GGATG	7 cut(s)	200, 264, 700, 726, 769, 971, 1369
BstFNI	CGCG	3 cut(s)	290, 348, 1269
BstH2I	RGCGCY	2 cut(s)	530, 1055
BstHHI	GCGC	4 cut(s)	421, 529, 1031, 1054
BstKTI	GATC	9 cut(s)	56, 295, 372, 588, 673, 893, 1318, 1404, 1460
BstMAI	GTCTC	4 cut(s)	401, 428, 611, 1487
BstMBI	GATC	9 cut(s)	53, 292, 369, 585, 670, 890, 1315, 1401, 1457
BstMCI	CGRYCG	4 cut(s)	236, 288, 361, 383
BstMWI	GCNNNNNNNGC	4 cut(s)	171, 342, 388, 457
BstNI	CCWGG	1 cut(s)	524
BstSCI	CCNGG	2 cut(s)	329, 522
BstUI	CGCG	3 cut(s)	290, 348, 1269
BstV1I	GCAGC	3 cut(s)	54, 122, 354
BstV2I	GAAGAC	1 cut(s)	66
BstX2I	RGATCY	1 cut(s)	369
BstXI	CCANNNNNNTGG	1 cut(s)	982
BstYI	RGATCY	1 cut(s)	369
BstZI	CGGCCG	2 cut(s)	358, 380
BsuRI	GGCC	6 cut(s)	61, 360, 382, 388, 599, 1360
BtgI	CCRYGG	3 cut(s)	383, 1064, 1355
BtrI	CACGTC	1 cut(s)	1510
BtsCI	GGATG	7 cut(s)	200, 264, 700, 726, 769, 971, 1369
BtsIMutI	CAGTG	2 cut(s)	1332, 1431
Cac8I	GCNNGC	3 cut(s)	99, 362, 1515
CfoI	GCGC	4 cut(s)	421, 529, 1031, 1054
Cfr10I	RCCGGY	3 cut(s)	97, 360, 599
Cfr13I	GGNCC	3 cut(s)	59, 516, 956
CseI	GACGC	4 cut(s)	228, 337, 508, 1251
Csp6I	GTAC	3 cut(s)	566, 1337, 1350
CviAII	CATG	3 cut(s)	125, 1356, 1490
CviQI	GTAC	3 cut(s)	566, 1337, 1350
DdeI	CTNAG	2 cut(s)	21, 897
DpnI	GATC	9 cut(s)	55, 294, 371, 587, 672, 892, 1317, 1403, 1459
DpnII	GATC	9 cut(s)	53, 292, 369, 585, 670, 890, 1315, 1401, 1457
EaeI	YGGCCR	4 cut(s)	358, 380, 386, 1358
EagI	CGGCCG	2 cut(s)	358, 380
Eam1104I	CTCTTC	1 cut(s)	1410
EarI	CTCTTC	1 cut(s)	1410
Ecl136II	GAGCTC	3 cut(s)	247, 318, 336
EclXI	CGGCCG	2 cut(s)	358, 380
Eco130I	CCWWGG	1 cut(s)	1355
Eco24I	GRGCYC	4 cut(s)	249, 320, 338, 1190
Eco47I	GGWCC	2 cut(s)	516, 956
Eco52I	CGGCCG	2 cut(s)	358, 380
Eco53kI	GAGCTC	3 cut(s)	247, 318, 336
Eco57I	CTGAAG	3 cut(s)	31, 60, 1143
Eco88I	CYCGRG	1 cut(s)	478
EcoICRI	GAGCTC	3 cut(s)	247, 318, 336
EcoNI	CCTNNNNNAGG	1 cut(s)	951
EcoO109I	RGGNCCY	1 cut(s)	956
EcoRII	CCWGG	1 cut(s)	522
EcoT14I	CCWWGG	1 cut(s)	1355
EcoT22I	ATGCAT	1 cut(s)	1009
EcoT38I	GRGCYC	4 cut(s)	249, 320, 338, 1190
ErhI	CCWWGG	1 cut(s)	1355
Esp3I	CGTCTC	3 cut(s)	401, 428, 611
FaeI	CATG	3 cut(s)	128, 1359, 1493
FatI	CATG	3 cut(s)	124, 1355, 1489
FauI	CCCGC	2 cut(s)	77, 277
Fnu4HI	GCNGC	7 cut(s)	40, 43, 136, 343, 346, 389, 725
FokI	GGATG	7 cut(s)	187, 251, 707, 733, 776, 958, 1376
FriOI	GRGCYC	4 cut(s)	249, 320, 338, 1190
Fsp4HI	GCNGC	7 cut(s)	40, 43, 136, 343, 346, 389, 725
FspBI	CTAG	3 cut(s)	260, 1151, 1386
GlaI	GCGC	4 cut(s)	420, 528, 1030, 1053
GluI	GCNGC	7 cut(s)	40, 43, 136, 343, 346, 389, 725
GsaI	CCCAGC	1 cut(s)	1086
GsuI	CTGGAG	3 cut(s)	322, 1094, 1356
HaeII	RGCGCY	2 cut(s)	530, 1055
HaeIII	GGCC	6 cut(s)	61, 360, 382, 388, 599, 1360
HgaI	GACGC	4 cut(s)	228, 337, 508, 1251
HhaI	GCGC	4 cut(s)	421, 529, 1031, 1054
Hin1I	GRCGYC	4 cut(s)	239, 500, 576, 1243
Hin1II	CATG	3 cut(s)	128, 1359, 1493
Hin6I	GCGC	4 cut(s)	419, 527, 1029, 1052
HinP1I	GCGC	4 cut(s)	419, 527, 1029, 1052
HincII	GTYRAC	1 cut(s)	472
HindII	GTYRAC	1 cut(s)	472
HindIII	AAGCTT	1 cut(s)	1515
HphI	GGTGA	2 cut(s)	508, 1127
Hpy166II	GTNNAC	2 cut(s)	472, 1241
Hpy188III	TCNNGA	3 cut(s)	433, 1373, 1473
Hpy8I	GTNNAC	2 cut(s)	472, 1241
Hpy99I	CGWCG	9 cut(s)	106, 211, 353, 356, 359, 406, 508, 578, 581
HpyAV	CCTTC	4 cut(s)	409, 478, 529, 1198
HpyCH4III	ACNGT	5 cut(s)	106, 439, 803, 1336, 1426
HpyCH4IV	ACGT	4 cut(s)	506, 576, 1348, 1509
HpyCH4V	TGCA	6 cut(s)	550, 782, 799, 1007, 1513, 1523
HpyF10VI	GCNNNNNNNGC	4 cut(s)	171, 342, 388, 457
HpyF3I	CTNAG	2 cut(s)	21, 897
HpySE526I	ACGT	4 cut(s)	506, 576, 1348, 1509
Hsp92I	GRCGYC	4 cut(s)	239, 500, 576, 1243
Hsp92II	CATG	3 cut(s)	128, 1359, 1493
HspAI	GCGC	4 cut(s)	419, 527, 1029, 1052
KroI	GCCGGC	2 cut(s)	97, 360
KroNI	GCCGGC	2 cut(s)	99, 362
Kzo9I	GATC	9 cut(s)	53, 292, 369, 585, 670, 890, 1315, 1401, 1457
LguI	GCTCTTC	1 cut(s)	1410
LmnI	GCTCC	7 cut(s)	315, 323, 333, 341, 448, 808, 1372
Lsp1109I	GCAGC	3 cut(s)	54, 122, 354
LweI	GCATC	2 cut(s)	711, 1354
MaeI	CTAG	3 cut(s)	260, 1151, 1386
MaeII	ACGT	4 cut(s)	506, 576, 1348, 1509
MaeIII	GTNAC	4 cut(s)	496, 607, 965, 1280
MalI	GATC	9 cut(s)	55, 294, 371, 587, 672, 892, 1317, 1403, 1459
MboI	GATC	9 cut(s)	53, 292, 369, 585, 670, 890, 1315, 1401, 1457
MboII	GAAGA	4 cut(s)	66, 178, 1136, 1427
MfeI	CAATTG	1 cut(s)	1311
MflI	RGATCY	1 cut(s)	369
MhlI	GDGCHC	5 cut(s)	249, 320, 338, 1190, 1453
MluCI	AATT	4 cut(s)	1033, 1292, 1311, 1443
MluI	ACGCGT	1 cut(s)	1267
MlyI	GAGTC	4 cut(s)	123, 908, 1202, 1419
MmeI	TCCRAC	3 cut(s)	45, 741, 838
Mph1103I	ATGCAT	1 cut(s)	1009
MreI	CGCCGGCG	1 cut(s)	97
MroNI	GCCGGC	2 cut(s)	97, 360
MseI	TTAA	4 cut(s)	90, 648, 1002, 1143
MslI	CAYNNNNRTG	1 cut(s)	494
MspR9I	CCNGG	2 cut(s)	331, 524
MunI	CAATTG	1 cut(s)	1311
Mva1269I	GAATGC	1 cut(s)	684
MvaI	CCWGG	1 cut(s)	524
MvnI	CGCG	3 cut(s)	290, 348, 1269
MwoI	GCNNNNNNNGC	4 cut(s)	171, 342, 388, 457
NaeI	GCCGGC	2 cut(s)	99, 362
NciI	CCSGG	1 cut(s)	331
NcoI	CCATGG	1 cut(s)	1355
NdeII	GATC	9 cut(s)	53, 292, 369, 585, 670, 890, 1315, 1401, 1457
NgoMIV	GCCGGC	2 cut(s)	97, 360
NlaIII	CATG	3 cut(s)	128, 1359, 1493
NlaIV	GGNNCC	4 cut(s)	60, 225, 256, 371
NmuCI	GTSAC	1 cut(s)	496
NsiI	ATGCAT	1 cut(s)	1009
NspV	TTCGAA	1 cut(s)	278
PciSI	GCTCTTC	1 cut(s)	1410
PcsI	WCGNNNNNNNCGW	1 cut(s)	585
PctI	GAATGC	1 cut(s)	684
PdiI	GCCGGC	2 cut(s)	99, 362
PfeI	GAWTC	7 cut(s)	68, 159, 211, 280, 375, 907, 934
Pfl23II	CGTACG	1 cut(s)	1349
PflMI	CCANNNNNTGG	2 cut(s)	709, 1388
PfoI	TCCNGGA	1 cut(s)	329
PkrI	GCNGC	7 cut(s)	41, 44, 137, 344, 347, 390, 726
PleI	GAGTC	4 cut(s)	123, 907, 1202, 1418
PpsI	GAGTC	4 cut(s)	123, 907, 1202, 1418
PpuMI	RGGWCCY	1 cut(s)	956
Psp124BI	GAGCTC	3 cut(s)	249, 320, 338
Psp5II	RGGWCCY	1 cut(s)	956
Psp6I	CCWGG	1 cut(s)	522
PspFI	CCCAGC	1 cut(s)	1082
PspGI	CCWGG	1 cut(s)	522
PspLI	CGTACG	1 cut(s)	1349
PspN4I	GGNNCC	4 cut(s)	60, 225, 256, 371
PspPI	GGNCC	3 cut(s)	59, 516, 956
PspPPI	RGGWCCY	1 cut(s)	956
PsuI	RGATCY	1 cut(s)	369
RsaI	GTAC	3 cut(s)	567, 1338, 1351
RsaNI	GTAC	3 cut(s)	566, 1337, 1350
RseI	CAYNNNNRTG	1 cut(s)	494
SacI	GAGCTC	3 cut(s)	249, 320, 338
SapI	GCTCTTC	1 cut(s)	1410
SaqAI	TTAA	4 cut(s)	90, 648, 1002, 1143
SatI	GCNGC	7 cut(s)	40, 43, 136, 343, 346, 389, 725
Sau3AI	GATC	9 cut(s)	53, 292, 369, 585, 670, 890, 1315, 1401, 1457
Sau96I	GGNCC	3 cut(s)	59, 516, 956
SchI	GAGTC	4 cut(s)	123, 908, 1202, 1419
ScrFI	CCNGG	2 cut(s)	331, 524
SduI	GDGCHC	5 cut(s)	249, 320, 338, 1190, 1453
SfaNI	GCATC	2 cut(s)	711, 1354
SfuI	TTCGAA	1 cut(s)	278
SgrAI	CRCCGGYG	1 cut(s)	97
SinI	GGWCC	2 cut(s)	516, 956
SmiMI	CAYNNNNRTG	1 cut(s)	494
Sse9I	AATT	4 cut(s)	1033, 1292, 1311, 1443
SspMI	CTAG	3 cut(s)	260, 1151, 1386
SstI	GAGCTC	3 cut(s)	249, 320, 338
StyD4I	CCNGG	2 cut(s)	329, 522
StyI	CCWWGG	1 cut(s)	1355
TaaI	ACNGT	5 cut(s)	106, 439, 803, 1336, 1426
TaiI	ACGT	4 cut(s)	509, 579, 1351, 1512
TaqI	TCGA	8 cut(s)	206, 278, 432, 816, 1221, 1413, 1447, 1474
TaqII	GACCGA	1 cut(s)	222
TasI	AATT	4 cut(s)	1033, 1292, 1311, 1443
TauI	GCSGC	4 cut(s)	42, 348, 391, 727
TfiI	GAWTC	7 cut(s)	68, 159, 211, 280, 375, 907, 934
Tru1I	TTAA	4 cut(s)	90, 648, 1002, 1143
Tru9I	TTAA	4 cut(s)	90, 648, 1002, 1143
TscAI	CASTG	2 cut(s)	1339, 1431
TseFI	GTSAC	1 cut(s)	496
TseI	GCWGC	3 cut(s)	42, 135, 342
Tsp45I	GTSAC	1 cut(s)	496
TspDTI	ATGAA	2 cut(s)	17, 428
TspGWI	ACGGA	2 cut(s)	419, 1081
TspRI	CASTG	2 cut(s)	1339, 1431
Van91I	CCANNNNNTGG	2 cut(s)	709, 1388
VpaK11BI	GGWCC	2 cut(s)	516, 956
XagI	CCTNNNNNAGG	1 cut(s)	951
XapI	RAATTY	2 cut(s)	1292, 1443
XspI	CTAG	3 cut(s)	260, 1151, 1386
ZraI	GACGTC	1 cut(s)	577
Zsp2I	ATGCAT	1 cut(s)	1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.