Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0010993

Physical Location & Seq

Genomic Coordinates Reverse (-)

20579154 .. 20583289

Gene Structure 4136 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1205600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGCATTGTTTCCCTCTATCCGTTCTCCTCGTCCTCCTTCTCCTCCCCCCCTCTCTCTCCTCGCTCACCGAGCTCCCTGCTCTCATGGCAATGAAGGCTTCGCTGGACCCACAAAACCAGTTCTTGACGTCATGGACGCCGCACGCCGACCCCTGCGGCGGCGCTTTCGAAGGGGTGGCTTGCAACGAGCAGGGCCGTGTGACCAACATCTCTCTGCAGGGGAAGGGCCTGTGGGGCCAGATTCCCCCGACCGTTGGCGGCCTCAAGAGCCTCACTGGCCTCTATCTTCACTTCAATGCTTTGAGTGGGAAAATCCCGAAGCAGCTTGCTGGTTTGAACCAGCTCGCTGATTTGTACCTCAACGTGAACAATCTTTCTGGTGCAATTCCTCGTGAGATTGGTAAAATGCCCAATTTGCAAGTTTTGCAGTTGTGTTACAACAAGTTGACTGGGGGGATACCTACACAATTAGGGCAGCTTAAAAGGCTTAGTGTTCTTGCTGTGCAATCCAATCAGTTAACTGGGGCAATTCCTGCAAGTTTGGGCGAGTTGGGGACGCTAACAAGGTTAGACTTGAGCTTTAATAGCTTATTTGGTCCTATTCCAGCAAGATTAGCCGATGCTCCTATGCTAGAAGTCCTTGACGTTCGAACCAATATTCTCTCAGGAAATGTACCTCCAGCTCTAAAGAGACTTAACGAAGGATTCCTATACGAAAACAACCCGAGCTTATGTGGGGTTGGGTTTTCTGGCTTAGAATTGTGCACAGCTACTAATACTCGGAACCCAAACATACCACAACCATTTGAACCTAGTAACCTTTCGGCAAAAGATCCAGACTCATCTACTGCAAAAGAAATCCCCAAGTCAGCAAATATCCATTCCAATTGTAGCCAAACCCGCTGTTCAGAGGCATCAAAATCCCCACAAATTGGTATAATCTTTGGGGTGATTGGAGTTATTGTTGCATTAACTGTATCTGGGCTCTTCTTGTTCTTCTGGTGTCGTCGACAAAAGCAGAAGATTGGGAGTACTTTTGACTCTTCTGATAGCAGGCTTAGTACTGACCAGGCAAAGGAAGTTTACAAGAAGAGCGTGTCTCCTCTTATCAATCTGGAGTATTCTAACGGGTGGGATCCGTTGGCTAAAGGTGGCAGTGGGTACTCTCAAGAAGTTCTTGAGAGTTTTATGATTAATTTAGAAGAAGTGGAGCGTGCAACTCAAAGCTTTTCTGAAGTCAATCTTTTGCGGAAGAGCAATTTTTCTGCCATCTACAAGGGTATCCTAAGAGACGGTTCGGTTGTTGCTATAAACTGCATTAGCAAGACTAGTTGTAAGCCCGACGAAGCTGAGTTTTTGAAGGGAATGAAGATATTGACATCATTAAAACATGAGAATCTTGTTAGGTTGAGAGGCTTTTGCTGCTCAAAAGGCAGGGGAGAGTGGTTTCTTATCTATGACTTTATCCCAAATGATAGTCTGTTACAGTATCTCGACATTAAGGATGGGAGTGGGGAGGTTCTTGAATGGTCAACCAGAGTATCTATAATCAATGGGATCGCTAAAGGTATTGGATATTTGCATGGAAACGTGGGCAATAAACCTGCTATTGTTCACCAGACCATGTCAGCTGAGAAGGTGCTTATTGATTCCCACTACAACCCCTTACTCTCAGATTCGGGCTTGCACAAACTCCTCGCAGATGATATCGTCTTCTCAATGCTCAAAGCCAGTGCTGCCATGGGGTACCTGGCTCCCGAGTACACAACCACTGGACGCTCCACTGCGAAGAGTGACATTTATGCGTTTGGTATGATTGTATTTCAAATCCTTTCTGGAAAACATAAAATCACCCAGGTGGCTCGCCAAGGTGCTGAGGCTGGCAGATTTGAAGATTTTATGGATGCAAACCTCGAGGGAAATTTTTCAGAATCAGAGGCAAGTAAACTTGGCAGACTTGCTCTTCTTTGCATGCACGAGTCTCCCATTTACAGGCCATCAATGGAAAATGTGGTGAAAGAGCTAAGCGAGTTTATTTGCGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

682

Amino Acids

73.99

Weight (kDa)

7.12

Isoelectric Point (pI)

34.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	23 - 62	1.4e-07	Leucine rich repeat N-terminal domain
LRR_14	PF23598	79 - 195	4.4e-09	Leucine-rich repeat region
LRR_8	PF13855	137 - 197	3.2e-07	Leucine rich repeat
PK_Tyr_Ser-Thr	PF07714	416 - 675	7.3e-32	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	420 - 673	7.4e-23	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0010993)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45340
fragaria_vesca	FvH4_7g11610 FvH4_7g11610 FvH4_7g11610
malus_domestica	MD02G1205600.v1.1 MD07G1120700.v1.1
prunus_persica	Prupe.2G144000_v2.0.a1
pyrus_communis	pycom02g16740 pycom07g10460
rosa_chinensis	RchiOBHm_Chr1g0350041
rosa_laevigata	RLG00000028504
rosa_multiflora	Rmu_sc0003674.1_g000018
rosa_roxburghii	Rroxscaffold_4G00305100
rosa_rugosa	Rorug01G0208200
rosa_samantha	Rh1AG224500 Rh1BG191800 Rh1CG209200 Rh1DG220300
rosa_wichuraiana	Rw1G019180 Rw1G019300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	131
AbsI	CCTCGAGG	1 cut(s)	1913
Acc36I	ACCTGC	1 cut(s)	1612
Acc65I	GGTACC	1 cut(s)	1746
AccB1I	GGYRCC	1 cut(s)	1746
AccB7I	CCANNNNNTGG	1 cut(s)	932
AccI	GTMKAC	1 cut(s)	1009
AciI	CCGC	6 cut(s)	140, 156, 159, 258, 901, 1249
AclWI	GGATC	4 cut(s)	827, 1130, 1143, 1565
AcsI	RAATTY	1 cut(s)	1921
AcuI	CTGAAG	1 cut(s)	1254
AcyI	GRCGYC	2 cut(s)	128, 137
AfaI	GTAC	7 cut(s)	356, 675, 1033, 1063, 1163, 1748, 1763
AfiI	CCNNNNNNNGG	5 cut(s)	158, 254, 932, 1075, 1992
AgsI	TTSAA	7 cut(s)	295, 337, 809, 1360, 1526, 1826, 1892
AhlI	ACTAGT	1 cut(s)	1328
AjnI	CCWGG	3 cut(s)	1068, 1749, 1854
AleI	CACNNNNGTG	1 cut(s)	1856
Alw21I	GWGCWC	2 cut(s)	75, 767
Alw26I	GTCTC	4 cut(s)	685, 1104, 1284, 1986
Alw44I	GTGCAC	1 cut(s)	763
AlwI	GGATC	4 cut(s)	827, 1130, 1143, 1565
Ama87I	CYCGRG	3 cut(s)	724, 1757, 1913
AoxI	GGCC	6 cut(s)	193, 226, 235, 259, 277, 1994
ApaLI	GTGCAC	1 cut(s)	763
ApeKI	GCWGC	4 cut(s)	322, 475, 1422, 1736
ApoI	RAATTY	1 cut(s)	1921
AseI	ATTAAT	1 cut(s)	1194
Asp700I	GAANNNNTTC	1 cut(s)	1924
Asp718I	GGTACC	1 cut(s)	1746
AspLEI	GCGC	1 cut(s)	164
AspS9I	GGNCC	5 cut(s)	106, 193, 226, 235, 596
AsuHPI	GGTGA	5 cut(s)	58, 961, 1607, 1843, 2026
AsuII	TTCGAA	2 cut(s)	168, 649
AvaI	CYCGRG	3 cut(s)	724, 1757, 1913
AvaII	GGWCC	2 cut(s)	106, 596
BaeGI	GKGCMC	1 cut(s)	767
BaeI	ACNNNNGTAYC	4 cut(s)	1264, 1297, 1524, 1557
BamHI	GGATCC	1 cut(s)	1135
BanI	GGYRCC	1 cut(s)	1746
BanII	GRGCYC	2 cut(s)	75, 987
BauI	CACGAG	2 cut(s)	390, 1976
BbsI	GAAGAC	1 cut(s)	1705
Bbv12I	GWGCWC	2 cut(s)	75, 767
BbvCI	CCTCAGC	1 cut(s)	1875
BbvI	GCAGC	4 cut(s)	334, 487, 1409, 1723
BccI	CCATC	3 cut(s)	1277, 1499, 2005
BceAI	ACGGC	1 cut(s)	180
BcgI	CGANNNNNNTGC	2 cut(s)	59, 93
BciT130I	CCWGG	3 cut(s)	1070, 1751, 1856
BciVI	GTATCC	2 cut(s)	450, 1292
BcoDI	GTCTC	4 cut(s)	685, 1104, 1284, 1986
BcuI	ACTAGT	1 cut(s)	1328
BfaI	CTAG	3 cut(s)	632, 813, 1329
BfmI	CTRYAG	1 cut(s)	215
BfoI	RGCGCY	1 cut(s)	165
BfuAI	ACCTGC	1 cut(s)	1612
BfuI	GTATCC	2 cut(s)	450, 1292
BglI	GCCNNNNNGGC	2 cut(s)	234, 276
BisI	GCNGC	8 cut(s)	140, 157, 160, 259, 323, 476, 1423, 1737
BlpI	GCTNAGC	1 cut(s)	2024
BlsI	GCNGC	8 cut(s)	141, 158, 161, 260, 324, 477, 1424, 1738
BmcAI	AGTACT	2 cut(s)	1033, 1063
Bme1390I	CCNGG	3 cut(s)	1070, 1751, 1856
Bme18I	GGWCC	2 cut(s)	106, 596
BmeT110I	CYCGRG	3 cut(s)	724, 1757, 1913
BmgT120I	GGNCC	5 cut(s)	106, 193, 226, 235, 596
BmiI	GGNNCC	6 cut(s)	108, 236, 785, 1137, 1748, 1755
BmrFI	CCNGG	3 cut(s)	1070, 1751, 1856
BmrI	ACTGGG	2 cut(s)	459, 531
BmsI	GCATC	3 cut(s)	610, 923, 1894
BmuI	ACTGGG	2 cut(s)	459, 531
BpiI	GAAGAC	1 cut(s)	1705
BplI	GAGNNNNNCTC	2 cut(s)	1084, 1116
BpmI	CTGGAG	2 cut(s)	663, 1136
Bpu10I	CCTNAGC	1 cut(s)	1875
Bpu1102I	GCTNAGC	1 cut(s)	2024
Bpu14I	TTCGAA	2 cut(s)	168, 649
BpuEI	CTTGAG	4 cut(s)	248, 595, 1152, 1199
BsaHI	GRCGYC	2 cut(s)	128, 137
BsaJI	CCNNGG	3 cut(s)	1740, 1854, 1867
BsaXI	ACNNNNNCTCC	2 cut(s)	948, 978
Bsc4I	CCNNNNNNNGG	5 cut(s)	158, 254, 932, 1075, 1992
Bse1I	ACTGG	6 cut(s)	118, 280, 454, 526, 1731, 1777
Bse3DI	GCAATG	1 cut(s)	96
BseBI	CCWGG	3 cut(s)	1070, 1751, 1856
BseDI	CCNNGG	3 cut(s)	1740, 1854, 1867
BseGI	GGATG	2 cut(s)	1510, 1909
BseLI	CCNNNNNNNGG	5 cut(s)	158, 254, 932, 1075, 1992
BseMI	GCAATG	1 cut(s)	96
BseMII	CTCAG	5 cut(s)	678, 1341, 1623, 1686, 1866
BseNI	ACTGG	6 cut(s)	118, 280, 454, 526, 1731, 1777
BseRI	GAGGAG	5 cut(s)	17, 32, 49, 1092, 1685
BseSI	GKGCMC	1 cut(s)	767
BseXI	GCAGC	4 cut(s)	334, 487, 1409, 1723
Bsh1285I	CGRYCG	1 cut(s)	252
BshFI	GGCC	6 cut(s)	195, 228, 237, 261, 279, 1996
BshNI	GGYRCC	1 cut(s)	1746
BsiEI	CGRYCG	1 cut(s)	252
BsiHKAI	GWGCWC	2 cut(s)	75, 767
BsiHKCI	CYCGRG	3 cut(s)	724, 1757, 1913
BslFI	GGGAC	1 cut(s)	568
BslI	CCNNNNNNNGG	5 cut(s)	158, 254, 932, 1075, 1992
BsmAI	GTCTC	4 cut(s)	685, 1104, 1284, 1986
BsmBI	CGTCTC	1 cut(s)	1284
BsmFI	GGGAC	1 cut(s)	568
BsnI	GGCC	6 cut(s)	195, 228, 237, 261, 279, 1996
BsoBI	CYCGRG	3 cut(s)	724, 1757, 1913
Bsp119I	TTCGAA	2 cut(s)	168, 649
Bsp1286I	GDGCHC	3 cut(s)	75, 767, 987
Bsp143I	GATC	3 cut(s)	832, 1135, 1557
Bsp1720I	GCTNAGC	1 cut(s)	2024
Bsp19I	CCATGG	1 cut(s)	1740
BspACI	CCGC	6 cut(s)	140, 156, 159, 258, 901, 1249
BspANI	GGCC	6 cut(s)	195, 228, 237, 261, 279, 1996
BspCNI	CTCAG	5 cut(s)	677, 1342, 1624, 1685, 1867
BspLI	GGNNCC	6 cut(s)	108, 236, 785, 1137, 1748, 1755
BspMAI	CTGCAG	1 cut(s)	219
BspMI	ACCTGC	1 cut(s)	1612
BspPI	GGATC	4 cut(s)	827, 1130, 1143, 1565
BspQI	GCTCTTC	4 cut(s)	992, 1085, 1247, 1968
BspT104I	TTCGAA	2 cut(s)	168, 649
BspT107I	GGYRCC	1 cut(s)	1746
BsrDI	GCAATG	1 cut(s)	96
BsrI	ACTGG	6 cut(s)	118, 280, 454, 526, 1731, 1777
BssECI	CCNNGG	3 cut(s)	1740, 1854, 1867
BssMI	GATC	3 cut(s)	832, 1135, 1557
BssNI	GRCGYC	2 cut(s)	128, 137
BssSI	CACGAG	2 cut(s)	390, 1976
BssT1I	CCWWGG	2 cut(s)	1740, 1867
Bst2BI	CACGAG	2 cut(s)	390, 1976
Bst2UI	CCWGG	3 cut(s)	1070, 1751, 1856
Bst4CI	ACNGT	4 cut(s)	253, 976, 1295, 1488
Bst6I	CTCTTC	6 cut(s)	992, 1048, 1085, 1247, 1784, 1968
BstACI	GRCGYC	2 cut(s)	128, 137
BstAPI	GCANNNNNTGC	2 cut(s)	424, 533
BstBI	TTCGAA	2 cut(s)	168, 649
BstDSI	CCRYGG	1 cut(s)	1740
BstF5I	GGATG	2 cut(s)	1510, 1909
BstH2I	RGCGCY	1 cut(s)	165
BstHHI	GCGC	1 cut(s)	164
BstKTI	GATC	3 cut(s)	835, 1138, 1560
BstMAI	GTCTC	4 cut(s)	685, 1104, 1284, 1986
BstMBI	GATC	3 cut(s)	832, 1135, 1557
BstMCI	CGRYCG	1 cut(s)	252
BstNI	CCWGG	3 cut(s)	1070, 1751, 1856
BstNSI	RCATGY	1 cut(s)	1975
BstSCI	CCNGG	3 cut(s)	1068, 1749, 1854
BstSFI	CTRYAG	1 cut(s)	215
BstSLI	GKGCMC	1 cut(s)	767
BstV1I	GCAGC	4 cut(s)	334, 487, 1409, 1723
BstV2I	GAAGAC	1 cut(s)	1705
BstX2I	RGATCY	2 cut(s)	832, 1135
BstYI	RGATCY	2 cut(s)	832, 1135
BsuI	GTATCC	2 cut(s)	450, 1292
BsuRI	GGCC	6 cut(s)	195, 228, 237, 261, 279, 1996
BtgI	CCRYGG	1 cut(s)	1740
BtsCI	GGATG	2 cut(s)	1510, 1909
BtsI	GCAGTG	2 cut(s)	1162, 1782
BtsIMutI	CAGTG	5 cut(s)	273, 1162, 1738, 1770, 1782
BveI	ACCTGC	1 cut(s)	1612
CfoI	GCGC	1 cut(s)	164
Cfr13I	GGNCC	5 cut(s)	106, 193, 226, 235, 596
CseI	GACGC	3 cut(s)	145, 565, 1785
Csp6I	GTAC	7 cut(s)	355, 674, 1032, 1062, 1162, 1747, 1762
CviAII	CATG	7 cut(s)	85, 132, 1391, 1583, 1624, 1741, 1972
CviQI	GTAC	7 cut(s)	355, 674, 1032, 1062, 1162, 1747, 1762
DpnI	GATC	3 cut(s)	834, 1137, 1559
DpnII	GATC	3 cut(s)	832, 1135, 1557
Eam1104I	CTCTTC	6 cut(s)	992, 1048, 1085, 1247, 1784, 1968
EarI	CTCTTC	6 cut(s)	992, 1048, 1085, 1247, 1784, 1968
Ecl136II	GAGCTC	1 cut(s)	73
Eco130I	CCWWGG	2 cut(s)	1740, 1867
Eco24I	GRGCYC	2 cut(s)	75, 987
Eco32I	GATATC	1 cut(s)	1708
Eco47I	GGWCC	2 cut(s)	106, 596
Eco53kI	GAGCTC	1 cut(s)	73
Eco57I	CTGAAG	1 cut(s)	1254
Eco88I	CYCGRG	3 cut(s)	724, 1757, 1913
EcoICRI	GAGCTC	1 cut(s)	73
EcoO109I	RGGNCCY	1 cut(s)	226
EcoRII	CCWGG	3 cut(s)	1068, 1749, 1854
EcoRV	GATATC	1 cut(s)	1708
EcoT14I	CCWWGG	2 cut(s)	1740, 1867
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	75, 987
ErhI	CCWWGG	2 cut(s)	1740, 1867
Esp3I	CGTCTC	1 cut(s)	1284
FaeI	CATG	7 cut(s)	88, 135, 1394, 1586, 1627, 1744, 1975
FalI	AAGNNNNNCTT	4 cut(s)	1161, 1193, 1227, 1259
FaqI	GGGAC	1 cut(s)	568
FatI	CATG	7 cut(s)	84, 131, 1390, 1582, 1623, 1740, 1971
FauI	CCCGC	1 cut(s)	908
FblI	GTMKAC	1 cut(s)	1009
Fnu4HI	GCNGC	8 cut(s)	140, 157, 160, 259, 323, 476, 1423, 1737
FokI	GGATG	2 cut(s)	1517, 1916
FriOI	GRGCYC	2 cut(s)	75, 987
Fsp4HI	GCNGC	8 cut(s)	140, 157, 160, 259, 323, 476, 1423, 1737
FspBI	CTAG	3 cut(s)	632, 813, 1329
GlaI	GCGC	1 cut(s)	163
GluI	GCNGC	8 cut(s)	140, 157, 160, 259, 323, 476, 1423, 1737
GsuI	CTGGAG	2 cut(s)	663, 1136
HaeII	RGCGCY	1 cut(s)	165
HaeIII	GGCC	6 cut(s)	195, 228, 237, 261, 279, 1996
HgaI	GACGC	3 cut(s)	145, 565, 1785
HhaI	GCGC	1 cut(s)	164
Hin1I	GRCGYC	2 cut(s)	128, 137
Hin1II	CATG	7 cut(s)	88, 135, 1394, 1586, 1627, 1744, 1975
Hin6I	GCGC	1 cut(s)	162
HinP1I	GCGC	1 cut(s)	162
HincII	GTYRAC	4 cut(s)	447, 519, 1010, 1533
HindII	GTYRAC	4 cut(s)	447, 519, 1010, 1533
HindIII	AAGCTT	1 cut(s)	1225
HinfI	GANTC	9 cut(s)	241, 705, 839, 1040, 1396, 1649, 1676, 1931, 1979
HpaI	GTTAAC	1 cut(s)	519
HphI	GGTGA	5 cut(s)	58, 961, 1607, 1843, 2026
Hpy188I	TCNGA	7 cut(s)	783, 910, 1048, 1234, 1675, 1930, 1936
Hpy99I	CGWCG	2 cut(s)	1011, 1346
HpyAV	CCTTC	7 cut(s)	47, 88, 164, 217, 695, 1354, 1630
HpyCH4III	ACNGT	4 cut(s)	253, 976, 1295, 1488
HpyCH4IV	ACGT	4 cut(s)	128, 363, 645, 1590
HpySE526I	ACGT	4 cut(s)	128, 363, 645, 1590
Hsp92I	GRCGYC	2 cut(s)	128, 137
Hsp92II	CATG	7 cut(s)	88, 135, 1394, 1586, 1627, 1744, 1975
HspAI	GCGC	1 cut(s)	162
KpnI	GGTACC	1 cut(s)	1750
KspAI	GTTAAC	1 cut(s)	519
Kzo9I	GATC	3 cut(s)	832, 1135, 1557
LguI	GCTCTTC	4 cut(s)	992, 1085, 1247, 1968
LmnI	GCTCC	5 cut(s)	78, 628, 1210, 1759, 1784
Lsp1109I	GCAGC	4 cut(s)	334, 487, 1409, 1723
LweI	GCATC	3 cut(s)	610, 923, 1894
MaeI	CTAG	3 cut(s)	632, 813, 1329
MaeII	ACGT	4 cut(s)	128, 363, 645, 1590
MaeIII	GTNAC	5 cut(s)	199, 434, 815, 1482, 1793
MalI	GATC	3 cut(s)	834, 1137, 1559
MboI	GATC	3 cut(s)	832, 1135, 1557
MfeI	CAATTG	1 cut(s)	886
MflI	RGATCY	2 cut(s)	832, 1135
MhlI	GDGCHC	3 cut(s)	75, 767, 987
MlyI	GAGTC	3 cut(s)	833, 1034, 1988
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	1924
MseI	TTAA	8 cut(s)	480, 518, 582, 696, 971, 1194, 1385, 1500
MslI	CAYNNNNRTG	3 cut(s)	89, 294, 1856
MspA1I	CMGCKG	2 cut(s)	903, 1631
MspR9I	CCNGG	3 cut(s)	1070, 1751, 1856
MunI	CAATTG	1 cut(s)	886
MvaI	CCWGG	3 cut(s)	1070, 1751, 1856
NcoI	CCATGG	1 cut(s)	1740
NdeII	GATC	3 cut(s)	832, 1135, 1557
NlaIII	CATG	7 cut(s)	88, 135, 1394, 1586, 1627, 1744, 1975
NlaIV	GGNNCC	6 cut(s)	108, 236, 785, 1137, 1748, 1755
NmuCI	GTSAC	2 cut(s)	199, 1793
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	1 cut(s)	1975
NspV	TTCGAA	2 cut(s)	168, 649
OliI	CACNNNNGTG	1 cut(s)	1856
PaeI	GCATGC	1 cut(s)	1975
PaeR7I	CTCGAG	1 cut(s)	1913
PciSI	GCTCTTC	4 cut(s)	992, 1085, 1247, 1968
PdmI	GAANNNNTTC	1 cut(s)	1924
PfeI	GAWTC	6 cut(s)	241, 705, 1396, 1649, 1676, 1931
PflFI	GACNNNGTC	1 cut(s)	1624
PflMI	CCANNNNNTGG	1 cut(s)	932
PkrI	GCNGC	8 cut(s)	141, 158, 161, 260, 324, 477, 1424, 1738
PleI	GAGTC	3 cut(s)	833, 1034, 1987
PpsI	GAGTC	3 cut(s)	833, 1034, 1987
PshBI	ATTAAT	1 cut(s)	1194
Psp124BI	GAGCTC	1 cut(s)	75
Psp6I	CCWGG	3 cut(s)	1068, 1749, 1854
PspGI	CCWGG	3 cut(s)	1068, 1749, 1854
PspN4I	GGNNCC	6 cut(s)	108, 236, 785, 1137, 1748, 1755
PspPI	GGNCC	5 cut(s)	106, 193, 226, 235, 596
PspXI	VCTCGAGB	1 cut(s)	1913
PstI	CTGCAG	1 cut(s)	219
PsuI	RGATCY	2 cut(s)	832, 1135
PsyI	GACNNNGTC	1 cut(s)	1624
PvuII	CAGCTG	1 cut(s)	1631
RsaI	GTAC	7 cut(s)	356, 675, 1033, 1063, 1163, 1748, 1763
RsaNI	GTAC	7 cut(s)	355, 674, 1032, 1062, 1162, 1747, 1762
RseI	CAYNNNNRTG	3 cut(s)	89, 294, 1856
SacI	GAGCTC	1 cut(s)	75
SalI	GTCGAC	1 cut(s)	1008
SapI	GCTCTTC	4 cut(s)	992, 1085, 1247, 1968
SaqAI	TTAA	8 cut(s)	480, 518, 582, 696, 971, 1194, 1385, 1500
SatI	GCNGC	8 cut(s)	140, 157, 160, 259, 323, 476, 1423, 1737
Sau3AI	GATC	3 cut(s)	832, 1135, 1557
Sau96I	GGNCC	5 cut(s)	106, 193, 226, 235, 596
ScaI	AGTACT	2 cut(s)	1033, 1063
SchI	GAGTC	3 cut(s)	833, 1034, 1988
ScrFI	CCNGG	3 cut(s)	1070, 1751, 1856
SduI	GDGCHC	3 cut(s)	75, 767, 987
SfaNI	GCATC	3 cut(s)	610, 923, 1894
SfcI	CTRYAG	1 cut(s)	215
SfiI	GGCCNNNNNGGCC	1 cut(s)	234
Sfr274I	CTCGAG	1 cut(s)	1913
SfuI	TTCGAA	2 cut(s)	168, 649
SinI	GGWCC	2 cut(s)	106, 596
SlaI	CTCGAG	1 cut(s)	1913
SmiMI	CAYNNNNRTG	3 cut(s)	89, 294, 1856
SmlI	CTYRAG	5 cut(s)	263, 574, 1167, 1178, 1913
SmoI	CTYRAG	5 cut(s)	263, 574, 1167, 1178, 1913
SpeI	ACTAGT	1 cut(s)	1328
SphI	GCATGC	1 cut(s)	1975
SsiI	CCGC	6 cut(s)	140, 156, 159, 258, 901, 1249
SspI	AATATT	1 cut(s)	658
SspMI	CTAG	3 cut(s)	632, 813, 1329
SstI	GAGCTC	1 cut(s)	75
StyD4I	CCNGG	3 cut(s)	1068, 1749, 1854
StyI	CCWWGG	2 cut(s)	1740, 1867
TaaI	ACNGT	4 cut(s)	253, 976, 1295, 1488
TaiI	ACGT	4 cut(s)	131, 366, 648, 1593
TaqI	TCGA	5 cut(s)	168, 649, 1009, 1494, 1914
TatI	WGTACW	3 cut(s)	1031, 1061, 1761
TauI	GCSGC	4 cut(s)	142, 159, 162, 261
TfiI	GAWTC	6 cut(s)	241, 705, 1396, 1649, 1676, 1931
Tru1I	TTAA	8 cut(s)	480, 518, 582, 696, 971, 1194, 1385, 1500
Tru9I	TTAA	8 cut(s)	480, 518, 582, 696, 971, 1194, 1385, 1500
TscAI	CASTG	5 cut(s)	280, 1162, 1738, 1777, 1789
TseFI	GTSAC	2 cut(s)	199, 1793
TseI	GCWGC	4 cut(s)	322, 475, 1422, 1736
Tsp45I	GTSAC	2 cut(s)	199, 1793
TspDTI	ATGAA	2 cut(s)	107, 1382
TspGWI	ACGGA	2 cut(s)	10, 1128
TspRI	CASTG	5 cut(s)	280, 1162, 1738, 1777, 1789
Tth111I	GACNNNGTC	1 cut(s)	1624
Van91I	CCANNNNNTGG	1 cut(s)	932
VneI	GTGCAC	1 cut(s)	763
VpaK11BI	GGWCC	2 cut(s)	106, 596
VspI	ATTAAT	1 cut(s)	1194
XapI	RAATTY	1 cut(s)	1921
XceI	RCATGY	1 cut(s)	1975
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1738, 1747
XhoI	CTCGAG	1 cut(s)	1913
XmiI	GTMKAC	1 cut(s)	1009
XmnI	GAANNNNTTC	1 cut(s)	1924
XspI	CTAG	3 cut(s)	632, 813, 1329
ZraI	GACGTC	1 cut(s)	129
ZrmI	AGTACT	2 cut(s)	1033, 1063
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.