RchiOBHm_Chr1g0350041

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0010993
Physical Location & Seq
Forward (+)
43162551 .. 43166917
4367 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57594

Sequence Viewer

Length: 2046 bp
ATGCATTCCCTTCTCGCTGTTCTCCTTCTCCTTCTTCTCTCAACCCCTCTTTGTCTCTCCTCAGTGTCTGAGCTCCAGGCTCTCATGGCCATGAAGGCCTCTCTGGACCCACAAAACCAGTTCTTGACTTCATGGACTCCTCATTCTGATCCATGTGGTGATGATTTTGAAGGTGTGGCTTGCAATGAGCAAGGCCTTGTGACCAATATCTCTTTACAAGGGAAGGGTCTCTGGGGAGAGATACCCTCATCTGTGGGTGACCTGAAGAGCCTCACAGGCCTGTACCTCCACTTCAATGCCTTGAGTGGAAAAATCCCAAAGGAGATTGCTAATTTGGACCAGCTTAGTGACTTGTATCTAAATGTGAATAATCTCTCTGGAGCAATTCCTAGGCAGATTGGTAACATGTCTAATCTTCAAGTTCTGCAGCTGTGTTATAACAAGTTGACTGGTGGCATACCTACAGAACTGGGACATCTTAAGAGCCTAACTGTCCTTGCATTGCAATCCAATCAGTTAACGGGGGCGATTCCTGCTAGTTTGGGAGAGCTGGATACATTAACAAGGTTGGATTTGAGCTTTAATAACTTTTTTGGTCCTATTCCTGCAAGGTTAGCTGATGCCCCTATGCTACAAGTACTTGACATCCGAAACAATATCCTCTCTGGCAATGTACCTCCAGCTCTGATGAGACTTAATGGAGGATTCCAATACGAAAACAACCCTAGGTTATGTGGTGTTGGGTTTTCTGACTTAAAAGTTTGCAATGCTAATGCTCAGAACCCAATCATGCCACAACCTTATGAACCTAATAACCTTTCTGCAAAAGATCTTCCAAACTCACCTCCTGCAAAAGATATCCCCGAGTCGGCTAATGTACAGTCCAATTGCAGCCAATCCCGCTGTTCAGGAGCATCAAAATCTACCCAAGTTGGTATAGTTCTTGGGGTGATCGGAGTTGTTGTTGCTTTAACTGTAGCTGGACTCTTCATGTTCTCATGGTATCGACGGAGGAAACAGAAGATTGGGAATTCTTTTGACACATTTGATAGCAGGCTTAGCACTGATAAGGCAAAGGAGGTTTACAAGAAGACTGTGTCTCCTCTTATCAGTCTGGAGTATTCGAATGGATGGGACCCATTGGCTAAAGGTAACGGCGGGTACTCTCAAGAAGTTCTTGAGAGCTTTATGTTCAATTTGGAAGAAGTGGAGCGTGCAACTCAGAGCTTTTCGGAACTGAATCTGCTGCGCAAGAGCAATTTTTGTTCCATGTACAAAGGGATCCTAAGAGATGGATCAGTTGTTGCTGTAAACTGCATTGGCAAGACGAGCTGCAAGTCTGATGAAGCTGAATTTTTGAAGGGACTGAAGATTTTGACCTCCTTAAAACATGAAAATCTTGTTAGGTTGAGAGGATTTTGCTGTTCAAAAGGAAGGGGAGAGTGGTTTCTTATCTATGACTTCGTCCCAAATGAAAGTCTATTACAGTATCTTGACATTAAAGATGGTAGTGGGGAGGTTCTTGAATGGTCAACCAGAGTATCTATAATCAATGGCATTGCTAAAGGTATTGGGTATTTGCATGGTAATATAGGCAACAAACCAGCTATAGTTCACCAGAGTATATCAGCTGAGAAGGTGCTTATTGATTCCCACTATAACCCTTTACTCTCAGATTCGGGTCTGCACAAACTCCTGGCAGCTGATATTATCTACTCGATGCTCAAACCCAGTGCTGCCATGGGATACTTGGCTCCAGAGTATGTGACCACTGGTCGCTTCACCGGAAAGAGCGATGTCTATGCCTTTGGTATGATTATATTTCAAATCCTCTCGGGGAAACGCAAAATCACTAATGTTACTCGTCAAGGGGCTGAGGTAGGCAGGTTTGAAGATTTCATTGACGCGAACCTGGAGGAGAGGTTTTCAGAATCTGAGGCAACTAAACTCGGAAGAATTGCTCTTCATTGCACCCAGGAGTCTCCCAATCACAGGCCATCCATAGAATATGTGGTCAAAGAACTAAGTGAGTGTATCTGGACTTGA

Protein Analysis

681

Amino Acids

74.52

Weight (kDa)

6.3

Isoelectric Point (pI)

34.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 23 - 62 3.1e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 79 - 218 4.2e-13 Leucine-rich repeat region
LRR_8 PF13855 123 - 173 2e-06 Leucine rich repeat
LRR_8 PF13855 137 - 197 9.1e-08 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 416 - 675 2e-33 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 420 - 673 1.4e-22 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0010993)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G45340
fragaria_vesca FvH4_7g11610 FvH4_7g11610 FvH4_7g11610
malus_domestica MD02G1205600.v1.1 MD07G1120700.v1.1
prunus_persica Prupe.2G144000_v2.0.a1
pyrus_communis pycom02g16740 pycom07g10460
rosa_chinensis RchiOBHm_Chr1g0350041
rosa_laevigata RLG00000028504
rosa_multiflora Rmu_sc0003674.1_g000018
rosa_roxburghii Rroxscaffold_4G00305100
rosa_rugosa Rorug01G0208200
rosa_samantha Rh1AG224500 Rh1BG191800 Rh1CG209200 Rh1DG220300
rosa_wichuraiana Rw1G019180 Rw1G019300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 438
Acc16I TGCGCA 1 cut(s) 1250
Acc36I ACCTGC 1 cut(s) 1875
AccII CGCG 1 cut(s) 1907
AciI CCGC 2 cut(s) 901, 1158
AclWI GGATC 4 cut(s) 143, 1276, 1289, 1303
AcoI YGGCCR 1 cut(s) 87
AcsI RAATTY 2 cut(s) 1030, 1352
AcuI CTGAAG 2 cut(s) 284, 1388
AfaI GTAC 6 cut(s) 284, 639, 675, 879, 1163, 1274
AfiI CCNNNNNNNGG 2 cut(s) 868, 1992
AflII CTTAAG 1 cut(s) 479
AflIII ACRYGT 1 cut(s) 405
AgsI TTSAA 9 cut(s) 170, 295, 419, 1195, 1360, 1428, 1526, 1826, 1892
AhdI GACNNNNNGTC 1 cut(s) 1773
AjnI CCWGG 4 cut(s) 75, 1695, 1911, 1974
Alw21I GWGCWC 1 cut(s) 75
Alw26I GTCTC 5 cut(s) 59, 233, 685, 1104, 1986
AlwI GGATC 4 cut(s) 143, 1276, 1289, 1303
AlwNI CAGNNNCTG 2 cut(s) 68, 1934
Ama87I CYCGRG 2 cut(s) 863, 1834
AoxI GGCC 5 cut(s) 87, 96, 193, 277, 1994
ApeKI GCWGC 6 cut(s) 427, 891, 1246, 1332, 1700, 1736
ApoI RAATTY 2 cut(s) 1030, 1352
AspA2I CCTAGG 2 cut(s) 389, 725
AspLEI GCGC 1 cut(s) 1251
AspS9I GGNCC 4 cut(s) 106, 337, 596, 1135
AsuHPI GGTGA 6 cut(s) 170, 269, 834, 961, 1607, 1774
AsuII TTCGAA 1 cut(s) 1124
AvaI CYCGRG 2 cut(s) 863, 1834
AvaII GGWCC 4 cut(s) 106, 337, 596, 1135
AvrII CCTAGG 2 cut(s) 389, 725
BaeI ACNNNNGTAYC 2 cut(s) 1524, 1557
BalI TGGCCA 1 cut(s) 89
BamHI GGATCC 1 cut(s) 1281
BanII GRGCYC 1 cut(s) 75
BarI GAAGNNNNNNTAC 2 cut(s) 275, 307
BbsI GAAGAC 1 cut(s) 1097
Bbv12I GWGCWC 1 cut(s) 75
BbvCI CCTCAGC 1 cut(s) 1875
BbvI GCAGC 6 cut(s) 439, 903, 1233, 1319, 1712, 1723
BccI CCATC 4 cut(s) 1125, 1286, 1499, 2005
BceAI ACGGC 1 cut(s) 1171
BcgI CGANNNNNNTGC 2 cut(s) 1784, 1818
BciT130I CCWGG 4 cut(s) 77, 1697, 1913, 1976
BciVI GTATCC 2 cut(s) 547, 1739
BcoDI GTCTC 5 cut(s) 59, 233, 685, 1104, 1986
BfaI CTAG 3 cut(s) 390, 537, 726
BfmI CTRYAG 4 cut(s) 425, 462, 975, 1608
BfrI CTTAAG 1 cut(s) 479
BfuAI ACCTGC 1 cut(s) 1875
BfuI GTATCC 2 cut(s) 547, 1739
BglI GCCNNNNNGGC 2 cut(s) 95, 276
BglII AGATCT 1 cut(s) 829
BisI GCNGC 6 cut(s) 428, 892, 1247, 1333, 1701, 1737
BlnI CCTAGG 2 cut(s) 389, 725
BlpI GCTNAGC 1 cut(s) 1058
BlsI GCNGC 6 cut(s) 429, 893, 1248, 1334, 1702, 1738
BmcAI AGTACT 1 cut(s) 639
Bme1390I CCNGG 4 cut(s) 77, 1697, 1913, 1976
Bme18I GGWCC 4 cut(s) 106, 337, 596, 1135
BmeRI GACNNNNNGTC 1 cut(s) 1773
BmeT110I CYCGRG 2 cut(s) 863, 1834
BmgT120I GGNCC 4 cut(s) 106, 337, 596, 1135
BmiI GGNNCC 5 cut(s) 108, 1136, 1137, 1283, 1755
BmrFI CCNGG 4 cut(s) 77, 1697, 1913, 1976
BmrI ACTGGG 2 cut(s) 479, 1725
BmsI GCATC 3 cut(s) 610, 923, 1710
BmuI ACTGGG 2 cut(s) 479, 1725
BpiI GAAGAC 1 cut(s) 1097
BplI GAGNNNNNCTC 2 cut(s) 230, 262
BpmI CTGGAG 6 cut(s) 59, 399, 663, 1136, 1740, 1934
Bpu10I CCTNAGC 1 cut(s) 1875
Bpu1102I GCTNAGC 1 cut(s) 1058
Bpu14I TTCGAA 1 cut(s) 1124
BpuEI CTTGAG 3 cut(s) 322, 1152, 1199
BsaI GGTCTC 1 cut(s) 233
BsaJI CCNNGG 4 cut(s) 389, 725, 1740, 1974
BsaWI WCCGGW 1 cut(s) 1784
BsaXI ACNNNNNCTCC 6 cut(s) 948, 978, 1084, 1114, 1907, 1937
Bsc4I CCNNNNNNNGG 2 cut(s) 868, 1992
Bse1I ACTGG 5 cut(s) 118, 454, 474, 1731, 1777
Bse3DI GCAATG 6 cut(s) 190, 500, 676, 772, 1557, 1966
BseBI CCWGG 4 cut(s) 77, 1697, 1913, 1976
BseDI CCNNGG 4 cut(s) 389, 725, 1740, 1974
BseGI GGATG 3 cut(s) 645, 1136, 1997
BseLI CCNNNNNNNGG 2 cut(s) 868, 1992
BseMI GCAATG 6 cut(s) 190, 500, 676, 772, 1557, 1966
BseMII CTCAG 8 cut(s) 60, 75, 791, 1235, 1623, 1686, 1866, 1926
BseNI ACTGG 5 cut(s) 118, 454, 474, 1731, 1777
BseRI GAGGAG 4 cut(s) 49, 129, 1092, 1931
BseXI GCAGC 6 cut(s) 439, 903, 1233, 1319, 1712, 1723
BsgI GTGCAG 1 cut(s) 1670
Bsh1236I CGCG 1 cut(s) 1907
BshFI GGCC 5 cut(s) 89, 98, 195, 279, 1996
BsiHKAI GWGCWC 1 cut(s) 75
BsiHKCI CYCGRG 2 cut(s) 863, 1834
BsiSI CCGG 1 cut(s) 1785
BslFI GGGAC 4 cut(s) 486, 1148, 1377, 1451
BslI CCNNNNNNNGG 2 cut(s) 868, 1992
BsmAI GTCTC 5 cut(s) 59, 233, 685, 1104, 1986
BsmFI GGGAC 4 cut(s) 486, 1148, 1377, 1451
BsmI GAATGC 1 cut(s) 4
BsnI GGCC 5 cut(s) 89, 98, 195, 279, 1996
Bso31I GGTCTC 1 cut(s) 233
BsoBI CYCGRG 2 cut(s) 863, 1834
Bsp119I TTCGAA 1 cut(s) 1124
Bsp1286I GDGCHC 1 cut(s) 75
Bsp1407I TGTACA 2 cut(s) 877, 1272
Bsp143I GATC 5 cut(s) 148, 829, 951, 1281, 1295
Bsp1720I GCTNAGC 1 cut(s) 1058
Bsp19I CCATGG 1 cut(s) 1740
BspACI CCGC 2 cut(s) 901, 1158
BspANI GGCC 5 cut(s) 89, 98, 195, 279, 1996
BspCNI CTCAG 8 cut(s) 61, 74, 790, 1234, 1624, 1685, 1867, 1927
BspFNI CGCG 1 cut(s) 1907
BspLI GGNNCC 5 cut(s) 108, 1136, 1137, 1283, 1755
BspMAI CTGCAG 1 cut(s) 429
BspMI ACCTGC 1 cut(s) 1875
BspPI GGATC 4 cut(s) 143, 1276, 1289, 1303
BspQI GCTCTTC 2 cut(s) 260, 1968
BspT104I TTCGAA 1 cut(s) 1124
BspTI CTTAAG 1 cut(s) 479
BspTNI GGTCTC 1 cut(s) 233
BsrDI GCAATG 6 cut(s) 190, 500, 676, 772, 1557, 1966
BsrGI TGTACA 2 cut(s) 877, 1272
BsrI ACTGG 5 cut(s) 118, 454, 474, 1731, 1777
BssECI CCNNGG 4 cut(s) 389, 725, 1740, 1974
BssMI GATC 5 cut(s) 148, 829, 951, 1281, 1295
BssT1I CCWWGG 3 cut(s) 389, 725, 1740
Bst2UI CCWGG 4 cut(s) 77, 1697, 1913, 1976
Bst4CI ACNGT 5 cut(s) 493, 882, 976, 1096, 1488
Bst6I CTCTTC 3 cut(s) 260, 992, 1968
BstAFI CTTAAG 1 cut(s) 479
BstAUI TGTACA 2 cut(s) 877, 1272
BstBI TTCGAA 1 cut(s) 1124
BstC8I GCNNGC 3 cut(s) 181, 1055, 1215
BstDSI CCRYGG 1 cut(s) 1740
BstEII GGTNACC 1 cut(s) 257
BstF5I GGATG 3 cut(s) 645, 1136, 1997
BstFNI CGCG 1 cut(s) 1907
BstHHI GCGC 1 cut(s) 1251
BstKTI GATC 5 cut(s) 151, 832, 954, 1284, 1298
BstMAI GTCTC 5 cut(s) 59, 233, 685, 1104, 1986
BstMBI GATC 5 cut(s) 148, 829, 951, 1281, 1295
BstMWI GCNNNNNNNGC 8 cut(s) 86, 95, 276, 533, 614, 900, 1059, 1329
BstNI CCWGG 4 cut(s) 77, 1697, 1913, 1976
BstNSI RCATGY 1 cut(s) 409
BstPI GGTNACC 1 cut(s) 257
BstSCI CCNGG 4 cut(s) 75, 1695, 1911, 1974
BstSFI CTRYAG 4 cut(s) 425, 462, 975, 1608
BstUI CGCG 1 cut(s) 1907
BstV1I GCAGC 6 cut(s) 439, 903, 1233, 1319, 1712, 1723
BstV2I GAAGAC 1 cut(s) 1097
BstX2I RGATCY 2 cut(s) 829, 1281
BstYI RGATCY 2 cut(s) 829, 1281
BsuI GTATCC 2 cut(s) 547, 1739
BsuRI GGCC 5 cut(s) 89, 98, 195, 279, 1996
BtgI CCRYGG 1 cut(s) 1740
BtgZI GCGATG 1 cut(s) 1809
BtsCI GGATG 3 cut(s) 645, 1136, 1997
BtsIMutI CAGTG 4 cut(s) 69, 1062, 1738, 1770
BveI ACCTGC 1 cut(s) 1875
Cac8I GCNNGC 3 cut(s) 181, 1055, 1215
CaiI CAGNNNCTG 2 cut(s) 68, 1934
CfoI GCGC 1 cut(s) 1251
Cfr13I GGNCC 4 cut(s) 106, 337, 596, 1135
CseI GACGC 1 cut(s) 1913
Csp6I GTAC 6 cut(s) 283, 638, 674, 878, 1162, 1273
CviQI GTAC 6 cut(s) 283, 638, 674, 878, 1162, 1273
DpnI GATC 5 cut(s) 150, 831, 953, 1283, 1297
DpnII GATC 5 cut(s) 148, 829, 951, 1281, 1295
DriI GACNNNNNGTC 1 cut(s) 1773
EaeI YGGCCR 1 cut(s) 87
Eam1104I CTCTTC 3 cut(s) 260, 992, 1968
Eam1105I GACNNNNNGTC 1 cut(s) 1773
EarI CTCTTC 3 cut(s) 260, 992, 1968
Ecl136II GAGCTC 1 cut(s) 73
Eco130I CCWWGG 3 cut(s) 389, 725, 1740
Eco147I AGGCCT 3 cut(s) 98, 195, 279
Eco24I GRGCYC 1 cut(s) 75
Eco31I GGTCTC 1 cut(s) 233
Eco32I GATATC 1 cut(s) 859
Eco47I GGWCC 4 cut(s) 106, 337, 596, 1135
Eco53kI GAGCTC 1 cut(s) 73
Eco57I CTGAAG 2 cut(s) 284, 1388
Eco88I CYCGRG 2 cut(s) 863, 1834
Eco91I GGTNACC 1 cut(s) 257
EcoICRI GAGCTC 1 cut(s) 73
EcoO109I RGGNCCY 1 cut(s) 1135
EcoO65I GGTNACC 1 cut(s) 257
EcoRI GAATTC 1 cut(s) 1030
EcoRII CCWGG 4 cut(s) 75, 1695, 1911, 1974
EcoRV GATATC 1 cut(s) 859
EcoT14I CCWWGG 3 cut(s) 389, 725, 1740
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 75
ErhI CCWWGG 3 cut(s) 389, 725, 1740
FalI AAGNNNNNCTT 2 cut(s) 1161, 1193
FaqI GGGAC 4 cut(s) 486, 1148, 1377, 1451
FauI CCCGC 2 cut(s) 908, 1151
Fnu4HI GCNGC 6 cut(s) 428, 892, 1247, 1333, 1701, 1737
FokI GGATG 3 cut(s) 632, 1143, 1984
FriOI GRGCYC 1 cut(s) 75
Fsp4HI GCNGC 6 cut(s) 428, 892, 1247, 1333, 1701, 1737
FspBI CTAG 3 cut(s) 390, 537, 726
FspI TGCGCA 1 cut(s) 1250
GlaI GCGC 1 cut(s) 1250
GluI GCNGC 6 cut(s) 428, 892, 1247, 1333, 1701, 1737
GsuI CTGGAG 6 cut(s) 59, 399, 663, 1136, 1740, 1934
HaeIII GGCC 5 cut(s) 89, 98, 195, 279, 1996
HapII CCGG 1 cut(s) 1785
HgaI GACGC 1 cut(s) 1913
HhaI GCGC 1 cut(s) 1251
Hin6I GCGC 1 cut(s) 1249
HinP1I GCGC 1 cut(s) 1249
HincII GTYRAC 3 cut(s) 447, 519, 1533
HindII GTYRAC 3 cut(s) 447, 519, 1533
HpaI GTTAAC 1 cut(s) 519
HpaII CCGG 1 cut(s) 1785
HphI GGTGA 6 cut(s) 170, 269, 834, 961, 1607, 1774
Hpy166II GTNNAC 6 cut(s) 447, 519, 1084, 1312, 1533, 1615
Hpy8I GTNNAC 6 cut(s) 447, 519, 1084, 1312, 1533, 1615
Hpy99I CGWCG 1 cut(s) 1011
HpyAV CCTTC 9 cut(s) 20, 35, 41, 88, 164, 217, 1354, 1428, 1630
HpyCH4III ACNGT 5 cut(s) 493, 882, 976, 1096, 1488
HpyF10VI GCNNNNNNNGC 8 cut(s) 86, 95, 276, 533, 614, 900, 1059, 1329
HspAI GCGC 1 cut(s) 1249
KflI GGGWCCC 1 cut(s) 1135
KspAI GTTAAC 1 cut(s) 519
Kzo9I GATC 5 cut(s) 148, 829, 951, 1281, 1295
LguI GCTCTTC 2 cut(s) 260, 1968
LmnI GCTCC 5 cut(s) 78, 380, 911, 1210, 1759
Lsp1109I GCAGC 6 cut(s) 439, 903, 1233, 1319, 1712, 1723
LweI GCATC 3 cut(s) 610, 923, 1710
MaeI CTAG 3 cut(s) 390, 537, 726
MaeIII GTNAC 7 cut(s) 199, 257, 347, 401, 1151, 1765, 1858
MalI GATC 5 cut(s) 150, 831, 953, 1283, 1297
MboI GATC 5 cut(s) 148, 829, 951, 1281, 1295
MfeI CAATTG 1 cut(s) 886
MflI RGATCY 2 cut(s) 829, 1281
MhlI GDGCHC 1 cut(s) 75
MlsI TGGCCA 1 cut(s) 89
MluCI AATT 8 cut(s) 331, 384, 886, 1030, 1195, 1258, 1352, 1956
MluNI TGGCCA 1 cut(s) 89
MlyI GAGTC 4 cut(s) 130, 875, 978, 1988
MmeI TCCRAC 1 cut(s) 549
Mox20I TGGCCA 1 cut(s) 89
Mph1103I ATGCAT 1 cut(s) 6
MscI TGGCCA 1 cut(s) 89
MseI TTAA 9 cut(s) 480, 518, 560, 582, 696, 755, 971, 1385, 1500
MslI CAYNNNNRTG 2 cut(s) 89, 294
Msp20I TGGCCA 1 cut(s) 89
MspA1I CMGCKG 4 cut(s) 430, 903, 1631, 1703
MspCI CTTAAG 1 cut(s) 479
MspI CCGG 1 cut(s) 1785
MspR9I CCNGG 4 cut(s) 77, 1697, 1913, 1976
MunI CAATTG 1 cut(s) 886
Mva1269I GAATGC 1 cut(s) 4
MvaI CCWGG 4 cut(s) 77, 1697, 1913, 1976
MvnI CGCG 1 cut(s) 1907
MwoI GCNNNNNNNGC 8 cut(s) 86, 95, 276, 533, 614, 900, 1059, 1329
NcoI CCATGG 1 cut(s) 1740
NdeII GATC 5 cut(s) 148, 829, 951, 1281, 1295
NlaIV GGNNCC 5 cut(s) 108, 1136, 1137, 1283, 1755
NmuCI GTSAC 4 cut(s) 199, 257, 347, 1765
NsbI TGCGCA 1 cut(s) 1250
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 409
NspV TTCGAA 1 cut(s) 1124
PceI AGGCCT 3 cut(s) 98, 195, 279
PciI ACATGT 1 cut(s) 405
PciSI GCTCTTC 2 cut(s) 260, 1968
PctI GAATGC 1 cut(s) 4
PfeI GAWTC 6 cut(s) 529, 705, 1240, 1649, 1676, 1931
PflFI GACNNNGTC 2 cut(s) 1096, 1463
PkrI GCNGC 6 cut(s) 429, 893, 1248, 1334, 1702, 1738
PleI GAGTC 4 cut(s) 130, 874, 978, 1987
PpsI GAGTC 4 cut(s) 130, 874, 978, 1987
PpuMI RGGWCCY 1 cut(s) 1135
PscI ACATGT 1 cut(s) 405
PsiI TTATAA 1 cut(s) 438
Psp124BI GAGCTC 1 cut(s) 75
Psp5II RGGWCCY 1 cut(s) 1135
Psp6I CCWGG 4 cut(s) 75, 1695, 1911, 1974
PspEI GGTNACC 1 cut(s) 257
PspGI CCWGG 4 cut(s) 75, 1695, 1911, 1974
PspN4I GGNNCC 5 cut(s) 108, 1136, 1137, 1283, 1755
PspPI GGNCC 4 cut(s) 106, 337, 596, 1135
PspPPI RGGWCCY 1 cut(s) 1135
PstI CTGCAG 1 cut(s) 429
PstNI CAGNNNCTG 2 cut(s) 68, 1934
PsuI RGATCY 2 cut(s) 829, 1281
PsyI GACNNNGTC 2 cut(s) 1096, 1463
PvuII CAGCTG 3 cut(s) 430, 1631, 1703
RsaI GTAC 6 cut(s) 284, 639, 675, 879, 1163, 1274
RsaNI GTAC 6 cut(s) 283, 638, 674, 878, 1162, 1273
RseI CAYNNNNRTG 2 cut(s) 89, 294
SacI GAGCTC 1 cut(s) 75
SapI GCTCTTC 2 cut(s) 260, 1968
SaqAI TTAA 9 cut(s) 480, 518, 560, 582, 696, 755, 971, 1385, 1500
SatI GCNGC 6 cut(s) 428, 892, 1247, 1333, 1701, 1737
Sau3AI GATC 5 cut(s) 148, 829, 951, 1281, 1295
Sau96I GGNCC 4 cut(s) 106, 337, 596, 1135
ScaI AGTACT 1 cut(s) 639
SchI GAGTC 4 cut(s) 130, 875, 978, 1988
ScrFI CCNGG 4 cut(s) 77, 1697, 1913, 1976
SduI GDGCHC 1 cut(s) 75
SfaNI GCATC 3 cut(s) 610, 923, 1710
SfcI CTRYAG 4 cut(s) 425, 462, 975, 1608
SfiI GGCCNNNNNGGCC 1 cut(s) 95
SfuI TTCGAA 1 cut(s) 1124
SinI GGWCC 4 cut(s) 106, 337, 596, 1135
SmiMI CAYNNNNRTG 2 cut(s) 89, 294
SmlI CTYRAG 4 cut(s) 301, 479, 1167, 1178
SmoI CTYRAG 4 cut(s) 301, 479, 1167, 1178
Sse9I AATT 8 cut(s) 331, 384, 886, 1030, 1195, 1258, 1352, 1956
SseBI AGGCCT 3 cut(s) 98, 195, 279
SsiI CCGC 2 cut(s) 901, 1158
SspMI CTAG 3 cut(s) 390, 537, 726
SstI GAGCTC 1 cut(s) 75
StuI AGGCCT 3 cut(s) 98, 195, 279
StyD4I CCNGG 4 cut(s) 75, 1695, 1911, 1974
StyI CCWWGG 3 cut(s) 389, 725, 1740
TaaI ACNGT 5 cut(s) 493, 882, 976, 1096, 1488
TaqI TCGA 3 cut(s) 1006, 1124, 1718
TasI AATT 8 cut(s) 331, 384, 886, 1030, 1195, 1258, 1352, 1956
TatI WGTACW 3 cut(s) 637, 877, 1272
TfiI GAWTC 6 cut(s) 529, 705, 1240, 1649, 1676, 1931
Tru1I TTAA 9 cut(s) 480, 518, 560, 582, 696, 755, 971, 1385, 1500
Tru9I TTAA 9 cut(s) 480, 518, 560, 582, 696, 755, 971, 1385, 1500
TscAI CASTG 4 cut(s) 69, 1069, 1738, 1777
TseFI GTSAC 4 cut(s) 199, 257, 347, 1765
TseI GCWGC 6 cut(s) 427, 891, 1246, 1332, 1700, 1736
Tsp45I GTSAC 4 cut(s) 199, 257, 347, 1765
TspDTI ATGAA 9 cut(s) 107, 120, 819, 979, 1359, 1407, 1488, 1888, 1955
TspGWI ACGGA 1 cut(s) 1024
TspRI CASTG 4 cut(s) 69, 1069, 1738, 1777
Tth111I GACNNNGTC 2 cut(s) 1096, 1463
Vha464I CTTAAG 1 cut(s) 479
VpaK11BI GGWCC 4 cut(s) 106, 337, 596, 1135
XapI RAATTY 2 cut(s) 1030, 1352
XceI RCATGY 1 cut(s) 409
XcmI CCANNNNNNNNNTGG 3 cut(s) 1738, 1747, 2008
XmaJI CCTAGG 2 cut(s) 389, 725
XspI CTAG 3 cut(s) 390, 537, 726
ZrmI AGTACT 1 cut(s) 639
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.