Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003674.1

Orthogroup ID

OG0010993

Physical Location & Seq

Genomic Coordinates Forward (+)

98010 .. 101455

Gene Structure 3446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003674.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

atgcattcccttctcgctgttctccttctccttcttctcttaacccctctttgtctctcctcagtgtctgagctccaggctctcatggccatgaaggcctctctggacccacaaaaccagttcttgacttcatggactcctcattctgatccatgtggtgatgattttgaaggtgtggcttgcaatgagcaaggccttgtgaccaatatctctttacaagggaagggtctctggggagagataccctcatctgtgggtgacctgaagagcctcacaggcttgtacctccacttcaatgccttgagtgggaaaatcccaaaggagattgctaatttggaccagcttagtgacttgtatctaaatgtgaataatctctctggagcaattcctaggcagattggtaacatgtctaatcttcaagttctgcagctgtgttataacaagttgactggtggcatacctacagaactgggacatcttaggagcctaactgtccttgcattgcaatccaatcagttaacgggcgcaattcctgctagtttgggagagctggatacattaacaaggttggatttgagctttaataacttttttggtcctattcctgcaaggttagctgatgcccctatgctacaagtacttgacatccgaaacaatatcctctctggcaatgtacctccagctctgaggagacttaatggaggattccaatacgaaaacaaccctaggttatgtggtgttgggttttctgacttaaaagtttgcaatgctaatgctcagaacccaaacatgccacaaccttatgaacctaataacctttctgcaaaagatcttccaaactcacctcctgcaaaagatatccccgagtcggctaatgtacagtccaattgcagccaatcccgctgttcaggagcatcaaaatctacccaagttggtatagttcttggggtgatcggagttgttgttgctttaactgtagctggactctttacgttctcatggtatcgacggaggaaacagaagattgggaattcttttgacacatttgatagcaggcttagcactgatcaggcaaaggaggtttacaagaagaccgtgtctcctcttatcagtctggagtattcgaatggatgggacccattggctaaaggtaacggcgggtactctcaagaagttcttgagagctttatgttcaatttggaagaagtggagcgtgcaactcagagcttttcggaactgaatctgctgcgcaagagcaatttttgttccatgtacaaagggatcctaagagatggatcagttgttgctgtaaactgcattggcaagacgagctgcaagtctgatgaagctgaatttttgaagggactgaagattttgacctccttaaaacacgaaaatcttgttaggttgagaggattttgctgttcaaaaggaaggggagagtggtttcttatctatgacttcgtcccaaatgaaagtctattacagtatcttgacattaaagatggtagtggggaggttcttgaatggtcaaccagagtatctataatcaatggcattgctaaaggtattgggtatttgcatggtaatataggcaacaaatcagctatagttcaccagagtatatcagctgagaaggtgcttattgattcccactataaccctttactctctgattcgggtctgcacaaactcctggcagctgatattatctactcgatgctcaaacccagtgctgccatgggatacttggctccagagtatgtgaccactggtcgcttcaccggaaagagcgatgtctatgcctttggtatgattatatttcaaatcctctcggggaaacgcaaaatcactaatgttactcgtcaaggggctgaggtaggcaggtttgaagatttcattgacgcgaacctggaggagaggttttcagaatctgaggcaactaaactcggaagaattgctcttcattgcacccaggagtctcccaatcacaggccatccatagaatatgtggtcaaagaactaagtgagtgtatctggacttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_8 Pkinase_Tyr

Protein Analysis

681

Amino Acids

74.56

Weight (kDa)

6.3

Isoelectric Point (pI)

36.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010993)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45340
fragaria_vesca	FvH4_7g11610 FvH4_7g11610 FvH4_7g11610
malus_domestica	MD02G1205600.v1.1 MD07G1120700.v1.1
prunus_persica	Prupe.2G144000_v2.0.a1
pyrus_communis	pycom02g16740 pycom07g10460
rosa_chinensis	RchiOBHm_Chr1g0350041
rosa_laevigata	RLG00000028504
rosa_multiflora	Rmu_sc0003674.1_g000018
rosa_roxburghii	Rroxscaffold_4G00305100
rosa_rugosa	Rorug01G0208200
rosa_samantha	Rh1AG224500 Rh1BG191800 Rh1CG209200 Rh1DG220300
rosa_wichuraiana	Rw1G019180 Rw1G019300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	438
Acc16I	TGCGCA	1 cut(s)	1250
Acc36I	ACCTGC	1 cut(s)	1875
AccII	CGCG	1 cut(s)	1907
AciI	CCGC	2 cut(s)	901, 1158
AclWI	GGATC	4 cut(s)	143, 1276, 1289, 1303
AcoI	YGGCCR	1 cut(s)	87
AcsI	RAATTY	2 cut(s)	1030, 1352
AcuI	CTGAAG	2 cut(s)	284, 1388
AfaI	GTAC	6 cut(s)	284, 639, 675, 879, 1163, 1274
AfiI	CCNNNNNNNGG	3 cut(s)	306, 868, 1992
AflIII	ACRYGT	1 cut(s)	405
AgsI	TTSAA	9 cut(s)	170, 295, 419, 1195, 1360, 1428, 1526, 1826, 1892
AhdI	GACNNNNNGTC	1 cut(s)	1773
AjnI	CCWGG	4 cut(s)	75, 1695, 1911, 1974
Alw21I	GWGCWC	1 cut(s)	75
Alw26I	GTCTC	5 cut(s)	59, 233, 685, 1104, 1986
AlwI	GGATC	4 cut(s)	143, 1276, 1289, 1303
AlwNI	CAGNNNCTG	2 cut(s)	68, 1934
Ama87I	CYCGRG	2 cut(s)	863, 1834
AoxI	GGCC	4 cut(s)	87, 96, 193, 1994
ApeKI	GCWGC	6 cut(s)	427, 891, 1246, 1332, 1700, 1736
ApoI	RAATTY	2 cut(s)	1030, 1352
AspA2I	CCTAGG	2 cut(s)	389, 725
AspLEI	GCGC	2 cut(s)	527, 1251
AspS9I	GGNCC	4 cut(s)	106, 337, 596, 1135
AsuHPI	GGTGA	6 cut(s)	170, 269, 834, 961, 1607, 1774
AsuII	TTCGAA	1 cut(s)	1124
AvaI	CYCGRG	2 cut(s)	863, 1834
AvaII	GGWCC	4 cut(s)	106, 337, 596, 1135
AvrII	CCTAGG	2 cut(s)	389, 725
BaeI	ACNNNNGTAYC	2 cut(s)	1524, 1557
BalI	TGGCCA	1 cut(s)	89
BamHI	GGATCC	1 cut(s)	1281
BanII	GRGCYC	1 cut(s)	75
BarI	GAAGNNNNNNTAC	2 cut(s)	275, 307
BbsI	GAAGAC	1 cut(s)	1097
Bbv12I	GWGCWC	1 cut(s)	75
BbvCI	CCTCAGC	1 cut(s)	1875
BbvI	GCAGC	6 cut(s)	439, 903, 1233, 1319, 1712, 1723
BccI	CCATC	4 cut(s)	1125, 1286, 1499, 2005
BceAI	ACGGC	1 cut(s)	1171
BcgI	CGANNNNNNTGC	2 cut(s)	1784, 1818
BciT130I	CCWGG	4 cut(s)	77, 1697, 1913, 1976
BciVI	GTATCC	2 cut(s)	547, 1739
BclI	TGATCA	1 cut(s)	1066
BcoDI	GTCTC	5 cut(s)	59, 233, 685, 1104, 1986
BfaI	CTAG	3 cut(s)	390, 537, 726
BfmI	CTRYAG	4 cut(s)	425, 462, 975, 1608
BfuAI	ACCTGC	1 cut(s)	1875
BfuI	GTATCC	2 cut(s)	547, 1739
BglI	GCCNNNNNGGC	2 cut(s)	95, 276
BglII	AGATCT	1 cut(s)	829
BisI	GCNGC	6 cut(s)	428, 892, 1247, 1333, 1701, 1737
BlnI	CCTAGG	2 cut(s)	389, 725
BlpI	GCTNAGC	1 cut(s)	1058
BlsI	GCNGC	6 cut(s)	429, 893, 1248, 1334, 1702, 1738
BmcAI	AGTACT	1 cut(s)	639
Bme1390I	CCNGG	4 cut(s)	77, 1697, 1913, 1976
Bme18I	GGWCC	4 cut(s)	106, 337, 596, 1135
BmeRI	GACNNNNNGTC	1 cut(s)	1773
BmeT110I	CYCGRG	2 cut(s)	863, 1834
BmgT120I	GGNCC	4 cut(s)	106, 337, 596, 1135
BmiI	GGNNCC	6 cut(s)	108, 485, 1136, 1137, 1283, 1755
BmrFI	CCNGG	4 cut(s)	77, 1697, 1913, 1976
BmrI	ACTGGG	2 cut(s)	479, 1725
BmsI	GCATC	3 cut(s)	610, 923, 1710
BmuI	ACTGGG	2 cut(s)	479, 1725
BpiI	GAAGAC	1 cut(s)	1097
BplI	GAGNNNNNCTC	2 cut(s)	230, 262
BpmI	CTGGAG	6 cut(s)	59, 399, 663, 1136, 1740, 1934
Bpu10I	CCTNAGC	1 cut(s)	1875
Bpu1102I	GCTNAGC	1 cut(s)	1058
Bpu14I	TTCGAA	1 cut(s)	1124
BpuEI	CTTGAG	3 cut(s)	322, 1152, 1199
BsaI	GGTCTC	1 cut(s)	233
BsaJI	CCNNGG	4 cut(s)	389, 725, 1740, 1974
BsaWI	WCCGGW	1 cut(s)	1784
BsaXI	ACNNNNNCTCC	6 cut(s)	948, 978, 1084, 1114, 1907, 1937
Bsc4I	CCNNNNNNNGG	3 cut(s)	306, 868, 1992
Bse1I	ACTGG	5 cut(s)	118, 454, 474, 1731, 1777
Bse3DI	GCAATG	6 cut(s)	190, 500, 676, 772, 1557, 1966
BseBI	CCWGG	4 cut(s)	77, 1697, 1913, 1976
BseDI	CCNNGG	4 cut(s)	389, 725, 1740, 1974
BseGI	GGATG	3 cut(s)	645, 1136, 1997
BseLI	CCNNNNNNNGG	3 cut(s)	306, 868, 1992
BseMI	GCAATG	6 cut(s)	190, 500, 676, 772, 1557, 1966
BseMII	CTCAG	8 cut(s)	60, 75, 677, 791, 1235, 1623, 1866, 1926
BseNI	ACTGG	5 cut(s)	118, 454, 474, 1731, 1777
BseRI	GAGGAG	5 cut(s)	49, 129, 703, 1092, 1931
BseXI	GCAGC	6 cut(s)	439, 903, 1233, 1319, 1712, 1723
BsgI	GTGCAG	1 cut(s)	1670
Bsh1236I	CGCG	1 cut(s)	1907
BshFI	GGCC	4 cut(s)	89, 98, 195, 1996
BsiHKAI	GWGCWC	1 cut(s)	75
BsiHKCI	CYCGRG	2 cut(s)	863, 1834
BsiSI	CCGG	1 cut(s)	1785
BslFI	GGGAC	4 cut(s)	486, 1148, 1377, 1451
BslI	CCNNNNNNNGG	3 cut(s)	306, 868, 1992
BsmAI	GTCTC	5 cut(s)	59, 233, 685, 1104, 1986
BsmFI	GGGAC	4 cut(s)	486, 1148, 1377, 1451
BsmI	GAATGC	1 cut(s)	4
BsnI	GGCC	4 cut(s)	89, 98, 195, 1996
Bso31I	GGTCTC	1 cut(s)	233
BsoBI	CYCGRG	2 cut(s)	863, 1834
Bsp119I	TTCGAA	1 cut(s)	1124
Bsp1286I	GDGCHC	1 cut(s)	75
Bsp1407I	TGTACA	2 cut(s)	877, 1272
Bsp143I	GATC	6 cut(s)	148, 829, 951, 1066, 1281, 1295
Bsp1720I	GCTNAGC	1 cut(s)	1058
Bsp19I	CCATGG	1 cut(s)	1740
BspACI	CCGC	2 cut(s)	901, 1158
BspANI	GGCC	4 cut(s)	89, 98, 195, 1996
BspCNI	CTCAG	8 cut(s)	61, 74, 678, 790, 1234, 1624, 1867, 1927
BspFNI	CGCG	1 cut(s)	1907
BspLI	GGNNCC	6 cut(s)	108, 485, 1136, 1137, 1283, 1755
BspMAI	CTGCAG	1 cut(s)	429
BspMI	ACCTGC	1 cut(s)	1875
BspPI	GGATC	4 cut(s)	143, 1276, 1289, 1303
BspQI	GCTCTTC	2 cut(s)	260, 1968
BspT104I	TTCGAA	1 cut(s)	1124
BspTNI	GGTCTC	1 cut(s)	233
BsrDI	GCAATG	6 cut(s)	190, 500, 676, 772, 1557, 1966
BsrGI	TGTACA	2 cut(s)	877, 1272
BsrI	ACTGG	5 cut(s)	118, 454, 474, 1731, 1777
BssECI	CCNNGG	4 cut(s)	389, 725, 1740, 1974
BssMI	GATC	6 cut(s)	148, 829, 951, 1066, 1281, 1295
BssT1I	CCWWGG	3 cut(s)	389, 725, 1740
Bst2UI	CCWGG	4 cut(s)	77, 1697, 1913, 1976
Bst4CI	ACNGT	5 cut(s)	493, 882, 976, 1096, 1488
Bst6I	CTCTTC	2 cut(s)	260, 1968
BstAPI	GCANNNNNTGC	1 cut(s)	533
BstAUI	TGTACA	2 cut(s)	877, 1272
BstBI	TTCGAA	1 cut(s)	1124
BstC8I	GCNNGC	3 cut(s)	181, 1055, 1215
BstDSI	CCRYGG	1 cut(s)	1740
BstEII	GGTNACC	1 cut(s)	257
BstF5I	GGATG	3 cut(s)	645, 1136, 1997
BstFNI	CGCG	1 cut(s)	1907
BstHHI	GCGC	2 cut(s)	527, 1251
BstKTI	GATC	6 cut(s)	151, 832, 954, 1069, 1284, 1298
BstMAI	GTCTC	5 cut(s)	59, 233, 685, 1104, 1986
BstMBI	GATC	6 cut(s)	148, 829, 951, 1066, 1281, 1295
BstMWI	GCNNNNNNNGC	8 cut(s)	86, 95, 276, 533, 614, 900, 1059, 1329
BstNI	CCWGG	4 cut(s)	77, 1697, 1913, 1976
BstNSI	RCATGY	2 cut(s)	409, 793
BstPI	GGTNACC	1 cut(s)	257
BstSCI	CCNGG	4 cut(s)	75, 1695, 1911, 1974
BstSFI	CTRYAG	4 cut(s)	425, 462, 975, 1608
BstUI	CGCG	1 cut(s)	1907
BstV1I	GCAGC	6 cut(s)	439, 903, 1233, 1319, 1712, 1723
BstV2I	GAAGAC	1 cut(s)	1097
BstX2I	RGATCY	2 cut(s)	829, 1281
BstYI	RGATCY	2 cut(s)	829, 1281
BsuI	GTATCC	2 cut(s)	547, 1739
BsuRI	GGCC	4 cut(s)	89, 98, 195, 1996
BtgI	CCRYGG	1 cut(s)	1740
BtgZI	GCGATG	1 cut(s)	1809
BtsCI	GGATG	3 cut(s)	645, 1136, 1997
BtsIMutI	CAGTG	4 cut(s)	69, 1062, 1738, 1770
BveI	ACCTGC	1 cut(s)	1875
Cac8I	GCNNGC	3 cut(s)	181, 1055, 1215
CaiI	CAGNNNCTG	2 cut(s)	68, 1934
CfoI	GCGC	2 cut(s)	527, 1251
Cfr13I	GGNCC	4 cut(s)	106, 337, 596, 1135
CseI	GACGC	1 cut(s)	1913
Csp6I	GTAC	6 cut(s)	283, 638, 674, 878, 1162, 1273
CviQI	GTAC	6 cut(s)	283, 638, 674, 878, 1162, 1273
DpnI	GATC	6 cut(s)	150, 831, 953, 1068, 1283, 1297
DpnII	GATC	6 cut(s)	148, 829, 951, 1066, 1281, 1295
DriI	GACNNNNNGTC	1 cut(s)	1773
EaeI	YGGCCR	1 cut(s)	87
Eam1104I	CTCTTC	2 cut(s)	260, 1968
Eam1105I	GACNNNNNGTC	1 cut(s)	1773
EarI	CTCTTC	2 cut(s)	260, 1968
Ecl136II	GAGCTC	1 cut(s)	73
Eco130I	CCWWGG	3 cut(s)	389, 725, 1740
Eco147I	AGGCCT	2 cut(s)	98, 195
Eco24I	GRGCYC	1 cut(s)	75
Eco31I	GGTCTC	1 cut(s)	233
Eco32I	GATATC	1 cut(s)	859
Eco47I	GGWCC	4 cut(s)	106, 337, 596, 1135
Eco53kI	GAGCTC	1 cut(s)	73
Eco57I	CTGAAG	2 cut(s)	284, 1388
Eco88I	CYCGRG	2 cut(s)	863, 1834
Eco91I	GGTNACC	1 cut(s)	257
EcoICRI	GAGCTC	1 cut(s)	73
EcoO109I	RGGNCCY	1 cut(s)	1135
EcoO65I	GGTNACC	1 cut(s)	257
EcoRI	GAATTC	1 cut(s)	1030
EcoRII	CCWGG	4 cut(s)	75, 1695, 1911, 1974
EcoRV	GATATC	1 cut(s)	859
EcoT14I	CCWWGG	3 cut(s)	389, 725, 1740
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	75
ErhI	CCWWGG	3 cut(s)	389, 725, 1740
FalI	AAGNNNNNCTT	2 cut(s)	1161, 1193
FaqI	GGGAC	4 cut(s)	486, 1148, 1377, 1451
FauI	CCCGC	2 cut(s)	908, 1151
FbaI	TGATCA	1 cut(s)	1066
Fnu4HI	GCNGC	6 cut(s)	428, 892, 1247, 1333, 1701, 1737
FokI	GGATG	3 cut(s)	632, 1143, 1984
FriOI	GRGCYC	1 cut(s)	75
Fsp4HI	GCNGC	6 cut(s)	428, 892, 1247, 1333, 1701, 1737
FspBI	CTAG	3 cut(s)	390, 537, 726
FspI	TGCGCA	1 cut(s)	1250
GlaI	GCGC	2 cut(s)	526, 1250
GluI	GCNGC	6 cut(s)	428, 892, 1247, 1333, 1701, 1737
GsuI	CTGGAG	6 cut(s)	59, 399, 663, 1136, 1740, 1934
HaeIII	GGCC	4 cut(s)	89, 98, 195, 1996
HapII	CCGG	1 cut(s)	1785
HgaI	GACGC	1 cut(s)	1913
HhaI	GCGC	2 cut(s)	527, 1251
Hin6I	GCGC	2 cut(s)	525, 1249
HinP1I	GCGC	2 cut(s)	525, 1249
HincII	GTYRAC	3 cut(s)	447, 519, 1533
HindII	GTYRAC	3 cut(s)	447, 519, 1533
HinfI	GANTC	9 cut(s)	136, 705, 866, 984, 1240, 1649, 1676, 1931, 1979
HpaI	GTTAAC	1 cut(s)	519
HpaII	CCGG	1 cut(s)	1785
HphI	GGTGA	6 cut(s)	170, 269, 834, 961, 1607, 1774
Hpy166II	GTNNAC	6 cut(s)	447, 519, 1084, 1312, 1533, 1615
Hpy8I	GTNNAC	6 cut(s)	447, 519, 1084, 1312, 1533, 1615
Hpy99I	CGWCG	1 cut(s)	1011
HpyAV	CCTTC	9 cut(s)	20, 35, 41, 88, 164, 217, 1354, 1428, 1630
HpyCH4III	ACNGT	5 cut(s)	493, 882, 976, 1096, 1488
HpyCH4IV	ACGT	1 cut(s)	992
HpyF10VI	GCNNNNNNNGC	8 cut(s)	86, 95, 276, 533, 614, 900, 1059, 1329
HpySE526I	ACGT	1 cut(s)	992
HspAI	GCGC	2 cut(s)	525, 1249
KflI	GGGWCCC	1 cut(s)	1135
Ksp22I	TGATCA	1 cut(s)	1066
KspAI	GTTAAC	1 cut(s)	519
Kzo9I	GATC	6 cut(s)	148, 829, 951, 1066, 1281, 1295
LguI	GCTCTTC	2 cut(s)	260, 1968
LmnI	GCTCC	6 cut(s)	78, 380, 483, 911, 1210, 1759
Lsp1109I	GCAGC	6 cut(s)	439, 903, 1233, 1319, 1712, 1723
LweI	GCATC	3 cut(s)	610, 923, 1710
MaeI	CTAG	3 cut(s)	390, 537, 726
MaeII	ACGT	1 cut(s)	992
MaeIII	GTNAC	7 cut(s)	199, 257, 347, 401, 1151, 1765, 1858
MalI	GATC	6 cut(s)	150, 831, 953, 1068, 1283, 1297
MboI	GATC	6 cut(s)	148, 829, 951, 1066, 1281, 1295
MfeI	CAATTG	1 cut(s)	886
MflI	RGATCY	2 cut(s)	829, 1281
MhlI	GDGCHC	1 cut(s)	75
MlsI	TGGCCA	1 cut(s)	89
MluCI	AATT	9 cut(s)	331, 384, 528, 886, 1030, 1195, 1258, 1352, 1956
MluNI	TGGCCA	1 cut(s)	89
MlyI	GAGTC	4 cut(s)	130, 875, 978, 1988
MmeI	TCCRAC	1 cut(s)	549
Mox20I	TGGCCA	1 cut(s)	89
Mph1103I	ATGCAT	1 cut(s)	6
MscI	TGGCCA	1 cut(s)	89
MseI	TTAA	9 cut(s)	41, 518, 560, 582, 696, 755, 971, 1385, 1500
MslI	CAYNNNNRTG	2 cut(s)	89, 294
Msp20I	TGGCCA	1 cut(s)	89
MspA1I	CMGCKG	4 cut(s)	430, 903, 1631, 1703
MspI	CCGG	1 cut(s)	1785
MspR9I	CCNGG	4 cut(s)	77, 1697, 1913, 1976
MunI	CAATTG	1 cut(s)	886
Mva1269I	GAATGC	1 cut(s)	4
MvaI	CCWGG	4 cut(s)	77, 1697, 1913, 1976
MvnI	CGCG	1 cut(s)	1907
MwoI	GCNNNNNNNGC	8 cut(s)	86, 95, 276, 533, 614, 900, 1059, 1329
NcoI	CCATGG	1 cut(s)	1740
NdeII	GATC	6 cut(s)	148, 829, 951, 1066, 1281, 1295
NlaIV	GGNNCC	6 cut(s)	108, 485, 1136, 1137, 1283, 1755
NmuCI	GTSAC	4 cut(s)	199, 257, 347, 1765
NsbI	TGCGCA	1 cut(s)	1250
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	409, 793
NspV	TTCGAA	1 cut(s)	1124
PceI	AGGCCT	2 cut(s)	98, 195
PciI	ACATGT	1 cut(s)	405
PciSI	GCTCTTC	2 cut(s)	260, 1968
PctI	GAATGC	1 cut(s)	4
PfeI	GAWTC	5 cut(s)	705, 1240, 1649, 1676, 1931
PflFI	GACNNNGTC	2 cut(s)	1096, 1463
PkrI	GCNGC	6 cut(s)	429, 893, 1248, 1334, 1702, 1738
PleI	GAGTC	4 cut(s)	130, 874, 978, 1987
PpsI	GAGTC	4 cut(s)	130, 874, 978, 1987
PpuMI	RGGWCCY	1 cut(s)	1135
PscI	ACATGT	1 cut(s)	405
PsiI	TTATAA	1 cut(s)	438
Psp124BI	GAGCTC	1 cut(s)	75
Psp5II	RGGWCCY	1 cut(s)	1135
Psp6I	CCWGG	4 cut(s)	75, 1695, 1911, 1974
PspEI	GGTNACC	1 cut(s)	257
PspGI	CCWGG	4 cut(s)	75, 1695, 1911, 1974
PspN4I	GGNNCC	6 cut(s)	108, 485, 1136, 1137, 1283, 1755
PspPI	GGNCC	4 cut(s)	106, 337, 596, 1135
PspPPI	RGGWCCY	1 cut(s)	1135
PstI	CTGCAG	1 cut(s)	429
PstNI	CAGNNNCTG	2 cut(s)	68, 1934
PsuI	RGATCY	2 cut(s)	829, 1281
PsyI	GACNNNGTC	2 cut(s)	1096, 1463
PvuII	CAGCTG	3 cut(s)	430, 1631, 1703
RsaI	GTAC	6 cut(s)	284, 639, 675, 879, 1163, 1274
RsaNI	GTAC	6 cut(s)	283, 638, 674, 878, 1162, 1273
RseI	CAYNNNNRTG	2 cut(s)	89, 294
SacI	GAGCTC	1 cut(s)	75
SapI	GCTCTTC	2 cut(s)	260, 1968
SaqAI	TTAA	9 cut(s)	41, 518, 560, 582, 696, 755, 971, 1385, 1500
SatI	GCNGC	6 cut(s)	428, 892, 1247, 1333, 1701, 1737
Sau3AI	GATC	6 cut(s)	148, 829, 951, 1066, 1281, 1295
Sau96I	GGNCC	4 cut(s)	106, 337, 596, 1135
ScaI	AGTACT	1 cut(s)	639
SchI	GAGTC	4 cut(s)	130, 875, 978, 1988
ScrFI	CCNGG	4 cut(s)	77, 1697, 1913, 1976
SduI	GDGCHC	1 cut(s)	75
SfaNI	GCATC	3 cut(s)	610, 923, 1710
SfcI	CTRYAG	4 cut(s)	425, 462, 975, 1608
SfiI	GGCCNNNNNGGCC	1 cut(s)	95
SfuI	TTCGAA	1 cut(s)	1124
SinI	GGWCC	4 cut(s)	106, 337, 596, 1135
SmiMI	CAYNNNNRTG	2 cut(s)	89, 294
SmlI	CTYRAG	3 cut(s)	301, 1167, 1178
SmoI	CTYRAG	3 cut(s)	301, 1167, 1178
Sse9I	AATT	9 cut(s)	331, 384, 528, 886, 1030, 1195, 1258, 1352, 1956
SseBI	AGGCCT	2 cut(s)	98, 195
SsiI	CCGC	2 cut(s)	901, 1158
SspMI	CTAG	3 cut(s)	390, 537, 726
SstI	GAGCTC	1 cut(s)	75
StuI	AGGCCT	2 cut(s)	98, 195
StyD4I	CCNGG	4 cut(s)	75, 1695, 1911, 1974
StyI	CCWWGG	3 cut(s)	389, 725, 1740
TaaI	ACNGT	5 cut(s)	493, 882, 976, 1096, 1488
TaiI	ACGT	1 cut(s)	995
TaqI	TCGA	3 cut(s)	1006, 1124, 1718
TasI	AATT	9 cut(s)	331, 384, 528, 886, 1030, 1195, 1258, 1352, 1956
TatI	WGTACW	3 cut(s)	637, 877, 1272
TfiI	GAWTC	5 cut(s)	705, 1240, 1649, 1676, 1931
Tru1I	TTAA	9 cut(s)	41, 518, 560, 582, 696, 755, 971, 1385, 1500
Tru9I	TTAA	9 cut(s)	41, 518, 560, 582, 696, 755, 971, 1385, 1500
TscAI	CASTG	4 cut(s)	69, 1069, 1738, 1777
TseFI	GTSAC	4 cut(s)	199, 257, 347, 1765
TseI	GCWGC	6 cut(s)	427, 891, 1246, 1332, 1700, 1736
Tsp45I	GTSAC	4 cut(s)	199, 257, 347, 1765
TspDTI	ATGAA	7 cut(s)	107, 120, 819, 1359, 1488, 1888, 1955
TspGWI	ACGGA	1 cut(s)	1024
TspRI	CASTG	4 cut(s)	69, 1069, 1738, 1777
Tth111I	GACNNNGTC	2 cut(s)	1096, 1463
VpaK11BI	GGWCC	4 cut(s)	106, 337, 596, 1135
XapI	RAATTY	2 cut(s)	1030, 1352
XceI	RCATGY	2 cut(s)	409, 793
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1738, 1747, 2008
XmaJI	CCTAGG	2 cut(s)	389, 725
XspI	CTAG	3 cut(s)	390, 537, 726
ZrmI	AGTACT	1 cut(s)	639
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.