MD02G1248500.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0018501
Physical Location & Seq
Reverse (-)
29938121 .. 29939515
1395 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1248500.v1.1.491

Sequence Viewer

Length: 1395 bp
ATGGTTTATTCTGCCCAGCACAGAAACATTAGCATTCTTATGCTTCCATGGTTAGGTCACGGCCATATTTCTCCCTTCCTAGAGCTAGCCAAGAAACTCACCAGTCTCAGAGACTTTCACATCTTTATTTGCTCCACACCTGTAAATCTCAGCTCTATCAAGCCAAAACTCCCTCAGAAATACTCTCACTGTATTGAGTTTGTGGAGCTCCATCTTCCACACGATGAGTTGCCTGAACTACCACCTCACTACCACACCACTAATGGCCTCCCACCCCATCTCATGCCCACTCTCAAAAAGGCCTTCGACATGTCCAGCGATAACTTCTCCGACATCCTCAAAACCCTAAAACCAGATTTGCTTATATATGATTTTCTTCAGCCATGGGCACCCTCCCTAGCTTTGTCTCACAACATTCCGGCCGTCGAGTTCATCACCACCAATGCTGCCTTGATGTCACTTAGTGTTCACCAACTCAAGAACCCTAATGCTCAATTTCCTTATACTTCCATCTATCTTCGGGATTACGAAGCTAAGAAGTTCAGCAATCTGCTAGAATCTTCAGCAAATGGCATCAAGGACGGAGAGCGCGTACTGCTGTCAAGTGATCGTTCTCGTAACATCATTTTGGTGAAGACATCTGGAGAGATCGAATCAAAATATGTTGATTATCTCTCTGAGTTAATGGAGAAGAAGATTGTGCCCGTCGGCTCACTTGTTCAAGACCCAATGGATCAAAAGGTCGATGAGGAATCGTCGATCATCAAATGGCTAAATGAAAGGGAAAGATCTTCGGTCGTGTTTGTGTCCTTCGGGAGCGAGTACTTTTTGTCTAAGGAGGAAATACAAGAGATAGCTCATGGGTTGGAGCTTAGCCAAGTGAGTTTCATTTGGGTTATTAGGTTTCCCAAGGAAGAGAGAAGTACTAGCGTTGAAGAGGTTTTGCCAAAAGGGTTTGGGGAGAGGGTGGGAGAGAGAGGGGTGATAATGGAGGGTTGGGCCCCACAGGAAAAAATACTGAAGCATTCTAGTGTCGGTGGGTTTGTGAGTCACTGCGGATGGAGCTCGGTGTTGGAGAGCATCAAGTTTGGTGTTCCGATTATAGCCATGCCTATGCAACTTGACCAACCAGTAAACGCAAGACTGGTGGAGGAGGTCGGCGTTGGTGTGGAGGTTATAAGAACCGGCGAAGGAGGCAGTTTGCAACGGGAAGAGGTGGCGAAGGTGATCAGAGATGTGGTGGTGGAGAAGATTGGAGACTGTGTGAGAATAAGGGCTTTGGAATTGAGAGACAACATGAAGATGAAAGAGGATGAAGAGTTGGATTGGGTGGTGGAGGAGTTGATGCAACTTTGTACGAAGACGGAAGGGGAATCAGTTAGTACCTACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

465

Amino Acids

52.56

Weight (kDa)

5.42

Isoelectric Point (pI)

48.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 9 - 237 7.3e-08 Glycosyltransferase, N-terminal domain
UDPGT PF00201 258 - 393 6.6e-20 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 331 - 414 3e-07 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1178
AccB1I GGYRCC 1 cut(s) 388
AccII CGCG 1 cut(s) 591
AciI CCGC 1 cut(s) 1056
AclWI GGATC 1 cut(s) 741
AcoI YGGCCR 2 cut(s) 61, 420
AcuI CTGAAG 3 cut(s) 362, 546, 1040
AdeI CACNNNGTG 1 cut(s) 464
AfaI GTAC 5 cut(s) 594, 824, 925, 1357, 1384
AfiI CCNNNNNNNGG 1 cut(s) 53
AflIII ACRYGT 1 cut(s) 309
AgsI TTSAA 2 cut(s) 722, 935
AluBI AGCT 8 cut(s) 85, 153, 208, 401, 533, 857, 871, 1065
AluI AGCT 8 cut(s) 85, 153, 208, 401, 533, 857, 871, 1065
Alw21I GWGCWC 2 cut(s) 210, 1067
Alw26I GTCTC 5 cut(s) 105, 110, 411, 1251, 1284
AlwI GGATC 1 cut(s) 741
AoxI GGCC 5 cut(s) 61, 265, 300, 420, 999
ApaI GGGCCC 1 cut(s) 1003
ApeKI GCWGC 1 cut(s) 446
AspLEI GCGC 1 cut(s) 591
AspS9I GGNCC 2 cut(s) 999, 1000
AsuHPI GGTGA 6 cut(s) 91, 427, 461, 643, 994, 1237
AsuNHI GCTAGC 1 cut(s) 85
BaeGI GKGCMC 3 cut(s) 391, 705, 1003
BanI GGYRCC 1 cut(s) 388
BanII GRGCYC 3 cut(s) 210, 1003, 1067
BbsI GAAGAC 2 cut(s) 641, 1367
Bbv12I GWGCWC 2 cut(s) 210, 1067
BbvI GCAGC 1 cut(s) 433
BccI CCATC 4 cut(s) 219, 285, 518, 1053
BceAI ACGGC 2 cut(s) 76, 407
BclI TGATCA 1 cut(s) 1227
BcoDI GTCTC 5 cut(s) 105, 110, 411, 1251, 1284
BfaI CTAG 6 cut(s) 80, 86, 398, 554, 927, 1029
BglII AGATCT 1 cut(s) 788
BisI GCNGC 1 cut(s) 447
BlpI GCTNAGC 1 cut(s) 872
BlsI GCNGC 1 cut(s) 448
BmcAI AGTACT 2 cut(s) 824, 925
BmgT120I GGNCC 2 cut(s) 999, 1000
BmiI GGNNCC 3 cut(s) 390, 1001, 1002
BmsI GCATC 3 cut(s) 582, 1089, 1335
BmtI GCTAGC 1 cut(s) 89
BpiI GAAGAC 2 cut(s) 641, 1367
BpmI CTGGAG 1 cut(s) 663
Bpu1102I GCTNAGC 1 cut(s) 872
BpuEI CTTGAG 1 cut(s) 461
BsaJI CCNNGG 3 cut(s) 47, 383, 909
BsaXI ACNNNNNCTCC 4 cut(s) 576, 606, 1248, 1278
Bsc4I CCNNNNNNNGG 1 cut(s) 53
Bse118I RCCGGY 1 cut(s) 1184
Bse1I ACTGG 3 cut(s) 102, 1130, 1149
BseDI CCNNGG 3 cut(s) 47, 383, 909
BseGI GGATG 3 cut(s) 333, 1064, 1318
BseLI CCNNNNNNNGG 1 cut(s) 53
BseMII CTCAG 4 cut(s) 121, 163, 188, 669
BseNI ACTGG 3 cut(s) 102, 1130, 1149
BseRI GAGGAG 2 cut(s) 1166, 1352
BseSI GKGCMC 3 cut(s) 391, 705, 1003
BseX3I CGGCCG 1 cut(s) 420
BseXI GCAGC 1 cut(s) 433
BseYI CCCAGC 1 cut(s) 15
Bsh1236I CGCG 1 cut(s) 591
Bsh1285I CGRYCG 2 cut(s) 423, 798
BshFI GGCC 5 cut(s) 63, 267, 302, 422, 1001
BshNI GGYRCC 1 cut(s) 388
BsiEI CGRYCG 2 cut(s) 423, 798
BsiHKAI GWGCWC 2 cut(s) 210, 1067
BsiSI CCGG 2 cut(s) 419, 1185
BslI CCNNNNNNNGG 1 cut(s) 53
BsmAI GTCTC 5 cut(s) 105, 110, 411, 1251, 1284
BsmI GAATGC 2 cut(s) 33, 1024
BsnI GGCC 5 cut(s) 63, 267, 302, 422, 1001
Bsp120I GGGCCC 1 cut(s) 999
Bsp1286I GDGCHC 5 cut(s) 210, 391, 705, 1003, 1067
Bsp143I GATC 6 cut(s) 607, 648, 733, 759, 788, 1227
Bsp1720I GCTNAGC 1 cut(s) 872
Bsp19I CCATGG 2 cut(s) 47, 383
BspACI CCGC 1 cut(s) 1056
BspANI GGCC 5 cut(s) 63, 267, 302, 422, 1001
BspCNI CTCAG 4 cut(s) 120, 162, 187, 670
BspFNI CGCG 1 cut(s) 591
BspLI GGNNCC 3 cut(s) 390, 1001, 1002
BspOI GCTAGC 1 cut(s) 89
BspPI GGATC 1 cut(s) 741
BspT107I GGYRCC 1 cut(s) 388
BsrFI RCCGGY 1 cut(s) 1184
BsrI ACTGG 3 cut(s) 102, 1130, 1149
BssAI RCCGGY 1 cut(s) 1184
BssECI CCNNGG 3 cut(s) 47, 383, 909
BssMI GATC 6 cut(s) 607, 648, 733, 759, 788, 1227
BssT1I CCWWGG 3 cut(s) 47, 383, 909
Bst4CI ACNGT 2 cut(s) 191, 1262
Bst6I CTCTTC 4 cut(s) 909, 930, 1206, 1311
BstC8I GCNNGC 1 cut(s) 87
BstDEI CTNAG 8 cut(s) 107, 149, 174, 461, 534, 678, 834, 872
BstDSI CCRYGG 2 cut(s) 47, 383
BstF5I GGATG 3 cut(s) 333, 1064, 1318
BstFNI CGCG 1 cut(s) 591
BstHHI GCGC 1 cut(s) 591
BstKTI GATC 6 cut(s) 610, 651, 736, 762, 791, 1230
BstMAI GTCTC 5 cut(s) 105, 110, 411, 1251, 1284
BstMBI GATC 6 cut(s) 607, 648, 733, 759, 788, 1227
BstMCI CGRYCG 2 cut(s) 423, 798
BstMWI GCNNNNNNNGC 3 cut(s) 595, 1062, 1194
BstNSI RCATGY 1 cut(s) 313
BstSLI GKGCMC 3 cut(s) 391, 705, 1003
BstUI CGCG 1 cut(s) 591
BstV1I GCAGC 1 cut(s) 433
BstV2I GAAGAC 2 cut(s) 641, 1367
BstX2I RGATCY 1 cut(s) 788
BstYI RGATCY 1 cut(s) 788
BstZI CGGCCG 1 cut(s) 420
BsuRI GGCC 5 cut(s) 63, 267, 302, 422, 1001
BtgI CCRYGG 2 cut(s) 47, 383
BtsCI GGATG 3 cut(s) 333, 1064, 1318
BtsI GCAGTG 1 cut(s) 1051
BtsIMutI CAGTG 2 cut(s) 187, 1051
Cac8I GCNNGC 1 cut(s) 87
CfoI GCGC 1 cut(s) 591
Cfr10I RCCGGY 1 cut(s) 1184
Cfr13I GGNCC 2 cut(s) 999, 1000
Csp6I GTAC 5 cut(s) 593, 823, 924, 1356, 1383
CspCI CAANNNNNGTGG 2 cut(s) 1128, 1163
CviAII CATG 7 cut(s) 48, 283, 310, 384, 860, 1108, 1297
CviQI GTAC 5 cut(s) 593, 823, 924, 1356, 1383
DdeI CTNAG 8 cut(s) 107, 149, 174, 461, 534, 678, 834, 872
DpnI GATC 6 cut(s) 609, 650, 735, 761, 790, 1229
DpnII GATC 6 cut(s) 607, 648, 733, 759, 788, 1227
DraIII CACNNNGTG 1 cut(s) 464
EaeI YGGCCR 2 cut(s) 61, 420
EagI CGGCCG 1 cut(s) 420
Eam1104I CTCTTC 4 cut(s) 909, 930, 1206, 1311
EarI CTCTTC 4 cut(s) 909, 930, 1206, 1311
Ecl136II GAGCTC 2 cut(s) 208, 1065
EclXI CGGCCG 1 cut(s) 420
Eco130I CCWWGG 3 cut(s) 47, 383, 909
Eco147I AGGCCT 1 cut(s) 302
Eco24I GRGCYC 3 cut(s) 210, 1003, 1067
Eco52I CGGCCG 1 cut(s) 420
Eco53kI GAGCTC 2 cut(s) 208, 1065
Eco57I CTGAAG 3 cut(s) 362, 546, 1040
EcoICRI GAGCTC 2 cut(s) 208, 1065
EcoO109I RGGNCCY 1 cut(s) 1000
EcoT14I CCWWGG 3 cut(s) 47, 383, 909
EcoT38I GRGCYC 3 cut(s) 210, 1003, 1067
ErhI CCWWGG 3 cut(s) 47, 383, 909
FaeI CATG 7 cut(s) 51, 286, 313, 387, 863, 1111, 1300
FatI CATG 7 cut(s) 47, 282, 309, 383, 859, 1107, 1296
FbaI TGATCA 1 cut(s) 1227
Fnu4HI GCNGC 1 cut(s) 447
FokI GGATG 3 cut(s) 320, 1071, 1325
FriOI GRGCYC 3 cut(s) 210, 1003, 1067
Fsp4HI GCNGC 1 cut(s) 447
FspBI CTAG 6 cut(s) 80, 86, 398, 554, 927, 1029
GlaI GCGC 1 cut(s) 590
GluI GCNGC 1 cut(s) 447
GsaI CCCAGC 1 cut(s) 19
GsuI CTGGAG 1 cut(s) 663
HaeIII GGCC 5 cut(s) 63, 267, 302, 422, 1001
HapII CCGG 2 cut(s) 419, 1185
HhaI GCGC 1 cut(s) 591
Hin1II CATG 7 cut(s) 51, 286, 313, 387, 863, 1111, 1300
Hin6I GCGC 1 cut(s) 589
HinP1I GCGC 1 cut(s) 589
HinfI GANTC 5 cut(s) 557, 653, 752, 1048, 1373
HpaII CCGG 2 cut(s) 419, 1185
HphI GGTGA 6 cut(s) 91, 427, 461, 643, 994, 1237
Hpy166II GTNNAC 2 cut(s) 469, 1135
Hpy188I TCNGA 6 cut(s) 110, 177, 331, 679, 1098, 1232
Hpy188III TCNNGA 5 cut(s) 478, 521, 642, 722, 814
Hpy8I GTNNAC 2 cut(s) 469, 1135
Hpy99I CGWCG 3 cut(s) 428, 710, 760
HpyAV CCTTC 6 cut(s) 85, 313, 820, 1184, 1216, 1361
HpyCH4III ACNGT 2 cut(s) 191, 1262
HpyCH4V TGCA 3 cut(s) 1117, 1204, 1348
HpyF10VI GCNNNNNNNGC 3 cut(s) 595, 1062, 1194
HpyF3I CTNAG 8 cut(s) 107, 149, 174, 461, 534, 678, 834, 872
Hsp92II CATG 7 cut(s) 51, 286, 313, 387, 863, 1111, 1300
HspAI GCGC 1 cut(s) 589
Ksp22I TGATCA 1 cut(s) 1227
Kzo9I GATC 6 cut(s) 607, 648, 733, 759, 788, 1227
LmnI GCTCC 6 cut(s) 137, 205, 213, 816, 868, 1062
Lsp1109I GCAGC 1 cut(s) 433
LweI GCATC 3 cut(s) 582, 1089, 1335
MaeI CTAG 6 cut(s) 80, 86, 398, 554, 927, 1029
MaeIII GTNAC 4 cut(s) 56, 456, 617, 1049
MalI GATC 6 cut(s) 609, 650, 735, 761, 790, 1229
MboI GATC 6 cut(s) 607, 648, 733, 759, 788, 1227
MflI RGATCY 1 cut(s) 788
MhlI GDGCHC 5 cut(s) 210, 391, 705, 1003, 1067
MluCI AATT 2 cut(s) 494, 1283
MlyI GAGTC 1 cut(s) 1057
MmeI TCCRAC 4 cut(s) 354, 846, 1053, 1302
MseI TTAA 2 cut(s) 683, 1393
MslI CAYNNNNRTG 5 cut(s) 38, 629, 1029, 1112, 1301
MspI CCGG 2 cut(s) 419, 1185
Mva1269I GAATGC 2 cut(s) 33, 1024
MvnI CGCG 1 cut(s) 591
MwoI GCNNNNNNNGC 3 cut(s) 595, 1062, 1194
NcoI CCATGG 2 cut(s) 47, 383
NdeII GATC 6 cut(s) 607, 648, 733, 759, 788, 1227
NheI GCTAGC 1 cut(s) 85
NlaIII CATG 7 cut(s) 51, 286, 313, 387, 863, 1111, 1300
NlaIV GGNNCC 3 cut(s) 390, 1001, 1002
NmuCI GTSAC 3 cut(s) 56, 456, 1049
NspI RCATGY 1 cut(s) 313
PceI AGGCCT 1 cut(s) 302
PciI ACATGT 1 cut(s) 309
PcsI WCGNNNNNNNCGW 1 cut(s) 588
PctI GAATGC 2 cut(s) 33, 1024
PfeI GAWTC 4 cut(s) 557, 653, 752, 1373
PkrI GCNGC 1 cut(s) 448
PleI GAGTC 1 cut(s) 1056
PpsI GAGTC 1 cut(s) 1056
PscI ACATGT 1 cut(s) 309
PsiI TTATAA 1 cut(s) 1178
Psp124BI GAGCTC 2 cut(s) 210, 1067
PspFI CCCAGC 1 cut(s) 15
PspN4I GGNNCC 3 cut(s) 390, 1001, 1002
PspOMI GGGCCC 1 cut(s) 999
PspPI GGNCC 2 cut(s) 999, 1000
PsuI RGATCY 1 cut(s) 788
RsaI GTAC 5 cut(s) 594, 824, 925, 1357, 1384
RsaNI GTAC 5 cut(s) 593, 823, 924, 1356, 1383
RseI CAYNNNNRTG 5 cut(s) 38, 629, 1029, 1112, 1301
SacI GAGCTC 2 cut(s) 210, 1067
SaqAI TTAA 2 cut(s) 683, 1393
SatI GCNGC 1 cut(s) 447
Sau3AI GATC 6 cut(s) 607, 648, 733, 759, 788, 1227
Sau96I GGNCC 2 cut(s) 999, 1000
ScaI AGTACT 2 cut(s) 824, 925
SchI GAGTC 1 cut(s) 1057
SduI GDGCHC 5 cut(s) 210, 391, 705, 1003, 1067
SfaNI GCATC 3 cut(s) 582, 1089, 1335
SmiMI CAYNNNNRTG 5 cut(s) 38, 629, 1029, 1112, 1301
SmlI CTYRAG 1 cut(s) 476
SmoI CTYRAG 1 cut(s) 476
Sse9I AATT 2 cut(s) 494, 1283
SseBI AGGCCT 1 cut(s) 302
SsiI CCGC 1 cut(s) 1056
SspMI CTAG 6 cut(s) 80, 86, 398, 554, 927, 1029
SstI GAGCTC 2 cut(s) 210, 1067
StuI AGGCCT 1 cut(s) 302
StyI CCWWGG 3 cut(s) 47, 383, 909
TaaI ACNGT 2 cut(s) 191, 1262
TaqI TCGA 5 cut(s) 306, 426, 651, 744, 758
TaqII GACCGA 1 cut(s) 784
TasI AATT 2 cut(s) 494, 1283
TatI WGTACW 2 cut(s) 822, 923
TfiI GAWTC 4 cut(s) 557, 653, 752, 1373
Tru1I TTAA 2 cut(s) 683, 1393
Tru9I TTAA 2 cut(s) 683, 1393
TscAI CASTG 2 cut(s) 194, 1058
TseFI GTSAC 3 cut(s) 56, 456, 1049
TseI GCWGC 1 cut(s) 446
Tsp45I GTSAC 3 cut(s) 56, 456, 1049
TspDTI ATGAA 6 cut(s) 421, 792, 877, 1313, 1319, 1329
TspGWI ACGGA 2 cut(s) 597, 1379
TspRI CASTG 2 cut(s) 194, 1058
XceI RCATGY 1 cut(s) 313
XcmI CCANNNNNNNNNTGG 1 cut(s) 260
XspI CTAG 6 cut(s) 80, 86, 398, 554, 927, 1029
ZrmI AGTACT 2 cut(s) 824, 925
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.