Prupe.2G084900_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0018501
Physical Location & Seq
Reverse (-)
13434306 .. 13436014
1709 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G084900.1

Sequence Viewer

Length: 1371 bp
ATGGTTTACTCTGACCAAAGAAAACTTACTATTCTTATGCTTCCATGGCTAGCTCACGGCCATATATCTCCCTACCTAGAGCTAGCCAAGAAGCTGACCACCAAGAGAAATTTTCACATCTTTATTTGTTCCACGCCTGTAAATCTCAGCTCCATCAAGCCTAAACTCTCCCAAAAATATTCTCATTGCATTGAATTTGTGGAACTCCATCTTCCACATGATGACTTGCCTGAACTCCCACCTCACTACCATACCACCAATGGCCTCCCTCCCCATCTCATGTCCACTCTCAAAAGGGCCTTTGATATGTCCAGCAACAACTTCTCCAACATCCTCAAAACCCTAAGCCCAGATTTGCTCATATATGATTTTCTTCAACCATGGGCGCCCTCTCTAGCTTCATTGCAAAATTTTCCATCCATCGAATTCATCACCATGGGTGCTGCCTTTACTTCATTTAGTATTCAACATCTCAAGAACCCTAGTGTCAAGTTTCCTTTTCCTTCGATTTATCTTCAAGATTACGAAGCTGAAAAGTTCAACAACGTGTTGGAATCTTCAGCAAATGGCATCAAAGATGGAGACCGTGTTCAGCAATGCAGTGCTCGATCTTGTAACATCATTTTGGTAAAGACATCCAGGGGGATTGAAGAAAAATATATTGATTATCTCTCTGATTTAATGGGGAAAAAGATCGTGCCTGTTGGCACGCTTGTTCAAGAGCCAGTGGATCAAAAAGTTGATGAGGAAACATGGATCATGAAATGGCTGAACAAAATGGAAAGGTCTTCTGTAGTGTATGTATGCTTTGGCAGTGAGTACTTTCTGTCCAAGGAGCAAATAGAAGAGATAGCTCACGGATTAGAGCTTAGCAAAGTGAGCTTCATTTGGGTTATAAGATTTTCTAAGGAGGAGAAAAATACTAGGGTTGAAGAGGTGTTACCAGAAGGGTTTTTACAGAGGGTGGGAGAGAAGGGAGTGATAATGGAGGGTTGGGCCCCACAGGCAAAGATACTGCAGCATTCTAGTGTTGGGGGGTTTGTGAGTCACTGCGGATGGAACTCAGTGTTGGAGAGCATCAAGTTTGGTGTTCCAATTATAGCCATGCCTATGCATCTTGACCAGCCGATCAACGCTAGACTAGTGGAGGAGGTGGGTGTTGGTGTTGAGGTTAAGAGAACAGGTGAAGGAAGTTTGCAAAGAGAAGAGGTCGCAAAGGTGATTAGAGATGTTTTTGTGGAGAAAATTGGAGAGGGAGTGAGAAAAAAGGCATTGAAAATAAGAGACAACATGAACAAGAAAGAGGATGAAGAGATTGATGGGGTCGTGGAGGAACTGATGCAAGTTTGTACGGGAAGGGAATCTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

457

Amino Acids

51.82

Weight (kDa)

6.2

Isoelectric Point (pI)

53.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 896
AccB1I GGYRCC 1 cut(s) 385
AciI CCGC 1 cut(s) 1053
AclWI GGATC 2 cut(s) 738, 764
AcoI YGGCCR 1 cut(s) 58
AcsI RAATTY 4 cut(s) 109, 194, 409, 425
AcuI CTGAAG 1 cut(s) 543
AcyI GRCGYC 1 cut(s) 386
AfaI GTAC 2 cut(s) 821, 1351
AflIII ACRYGT 1 cut(s) 546
AgsI TTSAA 9 cut(s) 194, 377, 467, 518, 541, 650, 719, 932, 1276
AhlI ACTAGT 1 cut(s) 1141
AjnI CCWGG 1 cut(s) 638
AjuI GAANNNNNNNTTGG 2 cut(s) 1052, 1084
AloI GAACNNNNNNTCC 2 cut(s) 573, 605
AluBI AGCT 9 cut(s) 53, 82, 94, 150, 398, 530, 854, 868, 882
AluI AGCT 9 cut(s) 53, 82, 94, 150, 398, 530, 854, 868, 882
Alw21I GWGCWC 1 cut(s) 607
Alw26I GTCTC 2 cut(s) 576, 1278
AlwI GGATC 2 cut(s) 738, 764
AoxI GGCC 4 cut(s) 58, 262, 297, 996
ApaI GGGCCC 1 cut(s) 1000
ApeKI GCWGC 2 cut(s) 443, 1018
ApoI RAATTY 4 cut(s) 109, 194, 409, 425
AspLEI GCGC 1 cut(s) 388
AspS9I GGNCC 3 cut(s) 297, 996, 997
AsuHPI GGTGA 3 cut(s) 424, 1196, 1231
AsuNHI GCTAGC 2 cut(s) 49, 82
BaeGI GKGCMC 1 cut(s) 1000
BanI GGYRCC 1 cut(s) 385
BanII GRGCYC 1 cut(s) 1000
BarI GAAGNNNNNNTAC 4 cut(s) 924, 939, 956, 971
BbsI GAAGAC 1 cut(s) 780
Bbv12I GWGCWC 1 cut(s) 607
BbvI GCAGC 2 cut(s) 430, 1030
BccI CCATC 8 cut(s) 161, 216, 282, 424, 428, 572, 1050, 1313
BceAI ACGGC 1 cut(s) 73
BciT130I CCWGG 1 cut(s) 640
BcoDI GTCTC 2 cut(s) 576, 1278
BcuI ACTAGT 1 cut(s) 1141
BfaI CTAG 9 cut(s) 50, 77, 83, 395, 483, 924, 1026, 1137, 1142
BfmI CTRYAG 2 cut(s) 792, 1016
BfoI RGCGCY 1 cut(s) 389
BglI GCCNNNNNGGC 1 cut(s) 1004
BisI GCNGC 2 cut(s) 444, 1019
BlpI GCTNAGC 1 cut(s) 869
BlsI GCNGC 2 cut(s) 445, 1020
BmcAI AGTACT 1 cut(s) 821
Bme1390I CCNGG 1 cut(s) 640
BmgT120I GGNCC 3 cut(s) 297, 996, 997
BmiI GGNNCC 3 cut(s) 387, 998, 999
BmrFI CCNGG 1 cut(s) 640
BmsI GCATC 4 cut(s) 579, 1086, 1123, 1329
BmtI GCTAGC 2 cut(s) 53, 86
BpiI GAAGAC 1 cut(s) 780
Bpu10I CCTNAGC 1 cut(s) 344
Bpu1102I GCTNAGC 1 cut(s) 869
BpuEI CTTGAG 1 cut(s) 458
BsaHI GRCGYC 1 cut(s) 386
BsaI GGTCTC 1 cut(s) 576
BsaJI CCNNGG 5 cut(s) 44, 380, 435, 639, 831
BsaXI ACNNNNNCTCC 6 cut(s) 308, 338, 573, 603, 1242, 1272
Bse1I ACTGG 1 cut(s) 725
Bse3DI GCAATG 3 cut(s) 184, 401, 602
BseBI CCWGG 1 cut(s) 640
BseDI CCNNGG 5 cut(s) 44, 380, 435, 639, 831
BseGI GGATG 5 cut(s) 330, 416, 635, 1061, 1312
BseMI GCAATG 3 cut(s) 184, 401, 602
BseMII CTCAG 2 cut(s) 160, 1077
BseNI ACTGG 1 cut(s) 725
BseRI GAGGAG 2 cut(s) 926, 1163
BseSI GKGCMC 1 cut(s) 1000
BseXI GCAGC 2 cut(s) 430, 1030
BshFI GGCC 4 cut(s) 60, 264, 299, 998
BshNI GGYRCC 1 cut(s) 385
BsiHKAI GWGCWC 1 cut(s) 607
BsmAI GTCTC 2 cut(s) 576, 1278
BsmI GAATGC 1 cut(s) 1021
BsnI GGCC 4 cut(s) 60, 264, 299, 998
Bso31I GGTCTC 1 cut(s) 576
Bsp120I GGGCCC 1 cut(s) 996
Bsp1286I GDGCHC 2 cut(s) 607, 1000
Bsp143I GATC 5 cut(s) 608, 693, 730, 756, 1128
Bsp1720I GCTNAGC 1 cut(s) 869
Bsp19I CCATGG 3 cut(s) 44, 380, 435
BspACI CCGC 1 cut(s) 1053
BspANI GGCC 4 cut(s) 60, 264, 299, 998
BspCNI CTCAG 2 cut(s) 159, 1076
BspHI TCATGA 1 cut(s) 759
BspLI GGNNCC 3 cut(s) 387, 998, 999
BspMAI CTGCAG 1 cut(s) 1020
BspOI GCTAGC 2 cut(s) 53, 86
BspPI GGATC 2 cut(s) 738, 764
BspT107I GGYRCC 1 cut(s) 385
BspTNI GGTCTC 1 cut(s) 576
BsrDI GCAATG 3 cut(s) 184, 401, 602
BsrI ACTGG 1 cut(s) 725
BssECI CCNNGG 5 cut(s) 44, 380, 435, 639, 831
BssMI GATC 5 cut(s) 608, 693, 730, 756, 1128
BssNI GRCGYC 1 cut(s) 386
BssT1I CCWWGG 4 cut(s) 44, 380, 435, 831
Bst2UI CCWGG 1 cut(s) 640
Bst4CI ACNGT 1 cut(s) 587
Bst6I CTCTTC 4 cut(s) 840, 927, 1200, 1305
BstACI GRCGYC 1 cut(s) 386
BstC8I GCNNGC 3 cut(s) 51, 84, 710
BstDEI CTNAG 6 cut(s) 146, 344, 869, 906, 1063, 1365
BstDSI CCRYGG 3 cut(s) 44, 380, 435
BstF5I GGATG 5 cut(s) 330, 416, 635, 1061, 1312
BstH2I RGCGCY 1 cut(s) 389
BstHHI GCGC 1 cut(s) 388
BstKTI GATC 5 cut(s) 611, 696, 733, 759, 1131
BstMAI GTCTC 2 cut(s) 576, 1278
BstMBI GATC 5 cut(s) 608, 693, 730, 756, 1128
BstMWI GCNNNNNNNGC 3 cut(s) 46, 879, 1004
BstNI CCWGG 1 cut(s) 640
BstSCI CCNGG 1 cut(s) 638
BstSFI CTRYAG 2 cut(s) 792, 1016
BstSLI GKGCMC 1 cut(s) 1000
BstV1I GCAGC 2 cut(s) 430, 1030
BstV2I GAAGAC 1 cut(s) 780
BsuRI GGCC 4 cut(s) 60, 264, 299, 998
BtgI CCRYGG 3 cut(s) 44, 380, 435
BtsCI GGATG 5 cut(s) 330, 416, 635, 1061, 1312
BtsI GCAGTG 3 cut(s) 607, 820, 1048
BtsIMutI CAGTG 5 cut(s) 607, 732, 820, 1048, 1071
Cac8I GCNNGC 3 cut(s) 51, 84, 710
CciI TCATGA 1 cut(s) 759
CfoI GCGC 1 cut(s) 388
Cfr13I GGNCC 3 cut(s) 297, 996, 997
Csp6I GTAC 2 cut(s) 820, 1350
CviAII CATG 9 cut(s) 45, 218, 280, 381, 436, 753, 760, 1105, 1291
CviQI GTAC 2 cut(s) 820, 1350
DdeI CTNAG 6 cut(s) 146, 344, 869, 906, 1063, 1365
DinI GGCGCC 1 cut(s) 387
DpnI GATC 5 cut(s) 610, 695, 732, 758, 1130
DpnII GATC 5 cut(s) 608, 693, 730, 756, 1128
EaeI YGGCCR 1 cut(s) 58
Eam1104I CTCTTC 4 cut(s) 840, 927, 1200, 1305
EarI CTCTTC 4 cut(s) 840, 927, 1200, 1305
Eco130I CCWWGG 4 cut(s) 44, 380, 435, 831
Eco24I GRGCYC 1 cut(s) 1000
Eco31I GGTCTC 1 cut(s) 576
Eco57I CTGAAG 1 cut(s) 543
EcoO109I RGGNCCY 2 cut(s) 297, 997
EcoRI GAATTC 1 cut(s) 425
EcoRII CCWGG 1 cut(s) 638
EcoT14I CCWWGG 4 cut(s) 44, 380, 435, 831
EcoT22I ATGCAT 1 cut(s) 1116
EcoT38I GRGCYC 1 cut(s) 1000
EgeI GGCGCC 1 cut(s) 387
EheI GGCGCC 1 cut(s) 387
ErhI CCWWGG 4 cut(s) 44, 380, 435, 831
FaeI CATG 9 cut(s) 48, 221, 283, 384, 439, 756, 763, 1108, 1294
FatI CATG 9 cut(s) 44, 217, 279, 380, 435, 752, 759, 1104, 1290
Fnu4HI GCNGC 2 cut(s) 444, 1019
FokI GGATG 5 cut(s) 317, 403, 622, 1068, 1319
FriOI GRGCYC 1 cut(s) 1000
Fsp4HI GCNGC 2 cut(s) 444, 1019
FspBI CTAG 9 cut(s) 50, 77, 83, 395, 483, 924, 1026, 1137, 1142
GlaI GCGC 1 cut(s) 387
GluI GCNGC 2 cut(s) 444, 1019
HaeII RGCGCY 1 cut(s) 389
HaeIII GGCC 4 cut(s) 60, 264, 299, 998
HhaI GCGC 1 cut(s) 388
Hin1I GRCGYC 1 cut(s) 386
Hin1II CATG 9 cut(s) 48, 221, 283, 384, 439, 756, 763, 1108, 1294
Hin6I GCGC 1 cut(s) 386
HinP1I GCGC 1 cut(s) 386
HinfI GANTC 3 cut(s) 554, 1045, 1361
HphI GGTGA 3 cut(s) 424, 1196, 1231
Hpy166II GTNNAC 2 cut(s) 7, 285
Hpy188I TCNGA 2 cut(s) 13, 676
Hpy188III TCNNGA 5 cut(s) 475, 518, 719, 760, 1118
Hpy8I GTNNAC 2 cut(s) 7, 285
HpyAV CCTTC 5 cut(s) 513, 941, 967, 1181, 1350
HpyCH4III ACNGT 1 cut(s) 587
HpyCH4IV ACGT 1 cut(s) 546
HpyCH4V TGCA 7 cut(s) 189, 406, 600, 1018, 1114, 1198, 1342
HpyF10VI GCNNNNNNNGC 3 cut(s) 46, 879, 1004
HpyF3I CTNAG 6 cut(s) 146, 344, 869, 906, 1063, 1365
HpySE526I ACGT 1 cut(s) 546
Hsp92I GRCGYC 1 cut(s) 386
Hsp92II CATG 9 cut(s) 48, 221, 283, 384, 439, 756, 763, 1108, 1294
HspAI GCGC 1 cut(s) 386
KasI GGCGCC 1 cut(s) 385
Kzo9I GATC 5 cut(s) 608, 693, 730, 756, 1128
LmnI GCTCC 2 cut(s) 155, 835
Lsp1109I GCAGC 2 cut(s) 430, 1030
LweI GCATC 4 cut(s) 579, 1086, 1123, 1329
MaeI CTAG 9 cut(s) 50, 77, 83, 395, 483, 924, 1026, 1137, 1142
MaeII ACGT 1 cut(s) 546
MaeIII GTNAC 3 cut(s) 614, 939, 1046
MalI GATC 5 cut(s) 610, 695, 732, 758, 1130
MboI GATC 5 cut(s) 608, 693, 730, 756, 1128
MhlI GDGCHC 2 cut(s) 607, 1000
MluCI AATT 6 cut(s) 109, 194, 409, 425, 1095, 1245
Mly113I GGCGCC 1 cut(s) 386
MlyI GAGTC 1 cut(s) 1054
MmeI TCCRAC 3 cut(s) 351, 531, 1050
Mph1103I ATGCAT 1 cut(s) 1116
MseI TTAA 2 cut(s) 680, 1173
MslI CAYNNNNRTG 3 cut(s) 434, 1026, 1109
MspR9I CCNGG 1 cut(s) 640
Mva1269I GAATGC 1 cut(s) 1021
MvaI CCWGG 1 cut(s) 640
MwoI GCNNNNNNNGC 3 cut(s) 46, 879, 1004
NarI GGCGCC 1 cut(s) 386
NcoI CCATGG 3 cut(s) 44, 380, 435
NdeII GATC 5 cut(s) 608, 693, 730, 756, 1128
NheI GCTAGC 2 cut(s) 49, 82
NlaIII CATG 9 cut(s) 48, 221, 283, 384, 439, 756, 763, 1108, 1294
NlaIV GGNNCC 3 cut(s) 387, 998, 999
NmuCI GTSAC 1 cut(s) 1046
NsiI ATGCAT 1 cut(s) 1116
PagI TCATGA 1 cut(s) 759
PctI GAATGC 1 cut(s) 1021
PfeI GAWTC 2 cut(s) 554, 1361
PkrI GCNGC 2 cut(s) 445, 1020
PleI GAGTC 1 cut(s) 1053
PluTI GGCGCC 1 cut(s) 389
PpsI GAGTC 1 cut(s) 1053
PsiI TTATAA 1 cut(s) 896
Psp6I CCWGG 1 cut(s) 638
PspGI CCWGG 1 cut(s) 638
PspN4I GGNNCC 3 cut(s) 387, 998, 999
PspOMI GGGCCC 1 cut(s) 996
PspPI GGNCC 3 cut(s) 297, 996, 997
PstI CTGCAG 1 cut(s) 1020
RsaI GTAC 2 cut(s) 821, 1351
RsaNI GTAC 2 cut(s) 820, 1350
RseI CAYNNNNRTG 3 cut(s) 434, 1026, 1109
SaqAI TTAA 2 cut(s) 680, 1173
SatI GCNGC 2 cut(s) 444, 1019
Sau3AI GATC 5 cut(s) 608, 693, 730, 756, 1128
Sau96I GGNCC 3 cut(s) 297, 996, 997
ScaI AGTACT 1 cut(s) 821
SchI GAGTC 1 cut(s) 1054
ScrFI CCNGG 1 cut(s) 640
SduI GDGCHC 2 cut(s) 607, 1000
SfaNI GCATC 4 cut(s) 579, 1086, 1123, 1329
SfcI CTRYAG 2 cut(s) 792, 1016
SfoI GGCGCC 1 cut(s) 387
SmiMI CAYNNNNRTG 3 cut(s) 434, 1026, 1109
SmlI CTYRAG 1 cut(s) 473
SmoI CTYRAG 1 cut(s) 473
SpeI ACTAGT 1 cut(s) 1141
Sse9I AATT 6 cut(s) 109, 194, 409, 425, 1095, 1245
SsiI CCGC 1 cut(s) 1053
SspDI GGCGCC 1 cut(s) 385
SspI AATATT 1 cut(s) 179
SspMI CTAG 9 cut(s) 50, 77, 83, 395, 483, 924, 1026, 1137, 1142
StyD4I CCNGG 1 cut(s) 638
StyI CCWWGG 4 cut(s) 44, 380, 435, 831
TaaI ACNGT 1 cut(s) 587
TaiI ACGT 1 cut(s) 549
TaqI TCGA 3 cut(s) 423, 506, 607
TasI AATT 6 cut(s) 109, 194, 409, 425, 1095, 1245
TatI WGTACW 1 cut(s) 819
TfiI GAWTC 2 cut(s) 554, 1361
Tru1I TTAA 2 cut(s) 680, 1173
Tru9I TTAA 2 cut(s) 680, 1173
TscAI CASTG 5 cut(s) 607, 732, 820, 1055, 1071
TseFI GTSAC 1 cut(s) 1046
TseI GCWGC 2 cut(s) 443, 1018
Tsp45I GTSAC 1 cut(s) 1046
TspDTI ATGAA 7 cut(s) 390, 418, 444, 776, 874, 1307, 1323
TspGWI ACGGA 1 cut(s) 873
TspRI CASTG 5 cut(s) 607, 732, 820, 1055, 1071
XapI RAATTY 4 cut(s) 109, 194, 409, 425
XcmI CCANNNNNNNNNTGG 1 cut(s) 257
XspI CTAG 9 cut(s) 50, 77, 83, 395, 483, 924, 1026, 1137, 1142
ZrmI AGTACT 1 cut(s) 821
Zsp2I ATGCAT 1 cut(s) 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.