Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0018501

Physical Location & Seq

Genomic Coordinates Reverse (-)

13467127 .. 13469459

Gene Structure 2333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G085000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGGTTTTCTCTGACCAAAGAAGCCTTACTATTCTTTTGCTTCCATGGCTAGCTCACGGCCATATATCTCCCTACCTAGAGCTAGCCAAGAAGCTGACCACCAAGAGAAATTTTCACATCTTTATTTGTTCCACGCCTGTAAATCTCAGCTCCATCAAGCCTAAACTCTCCCAAAAATATTCTCATTGCATTGAATTTGTGGAACTCCATCTTCCACATGATGACTTGCCTGAACTCCCACCGCACTACCACACCACCAATGGCCTCCCTCCCCATCTCATGTCCACTCTCAAAACGGCTTTCAGCATGTCCAGCAACAACTTCTCCAACATCCTCAAAACCCTAAGTCCAGATTTGCTCATATATGATGTTCTTCAACCATGGGCGCCCTCTCTAGCTTCATTGCAAAATTTTCCATCCATTGAATTCACCACCATGGGTGCTGCCTTTACTTCATTTAGTATTCAACATCTCAAGAACCCTAGTGTCAAGTTTCCTTTTCCTTCGATTTATCTTCAACATTACGAAGCTGAAAAGTTCAACAATTTGTTGGAATCTTCAGCAAATGGCATCAAAGACGGAGACCGTGTTCAGCAATGCAGTGCTCGATCTTGTAACATCATTTTGGTCAAGACATCCAGCGAGATTGAAGAAAAATATATTGATTATCTCTCTGATTTAACGGGGAAGAAGATCGTGCCTGTTGGCACGCTTGTTCAAGAGCCAATGGATCAAAAAGTTGATGAGGAAACATGGATCATGAAATGGCTGAACAAAATGGAAAGGTCTTCTGTTGTGTATGTTTGCTTTGGCAGTGAGTACTTTCTGTCCAAGGAGCAAATAGAAGAGATAGCTCACGGATTAGAGCTTAGCAAAGTGAGCTTCATTTGGGTTATAAGATTTTCTAAGGAGGAGAGAAGTACTAGGGTTGAAGAGGTGTTACCAGAAGGGTTTTTACAGAGGGTGGGAGAGAAGGGAGTGATAATGGAGGGTTGGGCCCCACAGGCAAAGATACTGCAGCATTCTAGTGTTGGGGGGTTTGTGAGTCACTGCGGATGGAACTCAGTGTTGGAGAGCATCAAGTTTGGTGTTCCAATTATAGCCATGCCTATGCATCTTGACCAGCCGATCAACGCTAGACTAGTGGAGGAGGTGGGTGTTGGTGTGGAGGTTAAGAGAACAGGTGAAGGAAGTTTGCAAAGAGAAGAGGTCGCAAAGGTGATTAGAGATGTGGTTGTGGAGAAATTTGGAGAGGGAGTGAGAAAAAAGGCATTGAAAATAAGCGACAACGTGAACAAGAAAGAGGATGAAGAGATTGATGGGGTCGTGGAGGAACTGATTCAAGTTTGTACAGGAAGGGAATCTAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

457

Amino Acids

51.51

Weight (kDa)

5.96

Isoelectric Point (pI)

56.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018501)

Species	Orthologous Gene IDs
malus_domestica	MD02G1248500.v1.1 MD07G1067600.v1.1 MD07G1067700.v1.1
prunus_persica	Prupe.2G084900_v2.0.a1 Prupe.2G085000_v2.0.a1 Prupe.2G085200_v2.0.a1 Prupe.2G085700_v2.0.a1 Prupe.2G086000_v2.0.a1
pyrus_communis	pycom07g05170 pycom07g05190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	896
AccB1I	GGYRCC	1 cut(s)	385
AciI	CCGC	2 cut(s)	242, 1053
AclWI	GGATC	2 cut(s)	738, 764
AcoI	YGGCCR	1 cut(s)	58
AcsI	RAATTY	5 cut(s)	109, 194, 409, 425, 1244
AcuI	CTGAAG	1 cut(s)	543
AcyI	GRCGYC	1 cut(s)	386
AfaI	GTAC	3 cut(s)	821, 922, 1351
AhlI	ACTAGT	1 cut(s)	1141
AjuI	GAANNNNNNNTTGG	2 cut(s)	1052, 1084
AloI	GAACNNNNNNTCC	2 cut(s)	573, 605
AluBI	AGCT	9 cut(s)	53, 82, 94, 150, 398, 530, 854, 868, 882
AluI	AGCT	9 cut(s)	53, 82, 94, 150, 398, 530, 854, 868, 882
Alw21I	GWGCWC	1 cut(s)	607
Alw26I	GTCTC	1 cut(s)	576
AlwI	GGATC	2 cut(s)	738, 764
AoxI	GGCC	3 cut(s)	58, 262, 996
ApaI	GGGCCC	1 cut(s)	1000
ApeKI	GCWGC	2 cut(s)	443, 1018
ApoI	RAATTY	5 cut(s)	109, 194, 409, 425, 1244
Asp700I	GAANNNNTTC	1 cut(s)	1338
AspLEI	GCGC	1 cut(s)	388
AspS9I	GGNCC	2 cut(s)	996, 997
AsuHPI	GGTGA	3 cut(s)	421, 1196, 1231
AsuNHI	GCTAGC	2 cut(s)	49, 82
BaeGI	GKGCMC	1 cut(s)	1000
BanI	GGYRCC	1 cut(s)	385
BanII	GRGCYC	1 cut(s)	1000
BarI	GAAGNNNNNNTAC	4 cut(s)	924, 939, 956, 971
BbsI	GAAGAC	1 cut(s)	780
Bbv12I	GWGCWC	1 cut(s)	607
BbvI	GCAGC	2 cut(s)	430, 1030
BccI	CCATC	6 cut(s)	161, 216, 282, 424, 1050, 1313
BceAI	ACGGC	2 cut(s)	73, 312
BcoDI	GTCTC	1 cut(s)	576
BcuI	ACTAGT	1 cut(s)	1141
BfaI	CTAG	9 cut(s)	50, 77, 83, 395, 483, 924, 1026, 1137, 1142
BfmI	CTRYAG	1 cut(s)	1016
BfoI	RGCGCY	1 cut(s)	389
BglI	GCCNNNNNGGC	1 cut(s)	1004
BisI	GCNGC	2 cut(s)	444, 1019
BlpI	GCTNAGC	1 cut(s)	869
BlsI	GCNGC	2 cut(s)	445, 1020
BmcAI	AGTACT	2 cut(s)	821, 922
BmgT120I	GGNCC	2 cut(s)	996, 997
BmiI	GGNNCC	3 cut(s)	387, 998, 999
BmsI	GCATC	3 cut(s)	579, 1086, 1123
BmtI	GCTAGC	2 cut(s)	53, 86
BpiI	GAAGAC	1 cut(s)	780
Bpu1102I	GCTNAGC	1 cut(s)	869
BpuEI	CTTGAG	1 cut(s)	458
BsaHI	GRCGYC	1 cut(s)	386
BsaI	GGTCTC	1 cut(s)	576
BsaJI	CCNNGG	4 cut(s)	44, 380, 435, 831
BsaXI	ACNNNNNCTCC	6 cut(s)	308, 338, 573, 603, 1242, 1272
Bse3DI	GCAATG	3 cut(s)	184, 401, 602
BseDI	CCNNGG	4 cut(s)	44, 380, 435, 831
BseGI	GGATG	5 cut(s)	330, 416, 635, 1061, 1312
BseMI	GCAATG	3 cut(s)	184, 401, 602
BseMII	CTCAG	2 cut(s)	160, 1077
BseRI	GAGGAG	2 cut(s)	926, 1163
BseSI	GKGCMC	1 cut(s)	1000
BseXI	GCAGC	2 cut(s)	430, 1030
BshFI	GGCC	3 cut(s)	60, 264, 998
BshNI	GGYRCC	1 cut(s)	385
BsiHKAI	GWGCWC	1 cut(s)	607
BsmAI	GTCTC	1 cut(s)	576
BsmI	GAATGC	1 cut(s)	1021
BsnI	GGCC	3 cut(s)	60, 264, 998
Bso31I	GGTCTC	1 cut(s)	576
Bsp120I	GGGCCC	1 cut(s)	996
Bsp1286I	GDGCHC	2 cut(s)	607, 1000
Bsp1407I	TGTACA	1 cut(s)	1349
Bsp143I	GATC	5 cut(s)	608, 693, 730, 756, 1128
Bsp1720I	GCTNAGC	1 cut(s)	869
Bsp19I	CCATGG	3 cut(s)	44, 380, 435
BspACI	CCGC	2 cut(s)	242, 1053
BspANI	GGCC	3 cut(s)	60, 264, 998
BspCNI	CTCAG	2 cut(s)	159, 1076
BspHI	TCATGA	1 cut(s)	759
BspLI	GGNNCC	3 cut(s)	387, 998, 999
BspMAI	CTGCAG	1 cut(s)	1020
BspOI	GCTAGC	2 cut(s)	53, 86
BspPI	GGATC	2 cut(s)	738, 764
BspT107I	GGYRCC	1 cut(s)	385
BspTNI	GGTCTC	1 cut(s)	576
BsrDI	GCAATG	3 cut(s)	184, 401, 602
BsrGI	TGTACA	1 cut(s)	1349
BssECI	CCNNGG	4 cut(s)	44, 380, 435, 831
BssMI	GATC	5 cut(s)	608, 693, 730, 756, 1128
BssNI	GRCGYC	1 cut(s)	386
BssT1I	CCWWGG	4 cut(s)	44, 380, 435, 831
Bst4CI	ACNGT	1 cut(s)	587
Bst6I	CTCTTC	4 cut(s)	840, 927, 1200, 1305
BstACI	GRCGYC	1 cut(s)	386
BstAUI	TGTACA	1 cut(s)	1349
BstC8I	GCNNGC	3 cut(s)	51, 84, 710
BstDEI	CTNAG	6 cut(s)	146, 344, 869, 906, 1063, 1365
BstDSI	CCRYGG	3 cut(s)	44, 380, 435
BstF5I	GGATG	5 cut(s)	330, 416, 635, 1061, 1312
BstH2I	RGCGCY	1 cut(s)	389
BstHHI	GCGC	1 cut(s)	388
BstKTI	GATC	5 cut(s)	611, 696, 733, 759, 1131
BstMAI	GTCTC	1 cut(s)	576
BstMBI	GATC	5 cut(s)	608, 693, 730, 756, 1128
BstMWI	GCNNNNNNNGC	4 cut(s)	46, 312, 879, 1004
BstNSI	RCATGY	1 cut(s)	310
BstSFI	CTRYAG	1 cut(s)	1016
BstSLI	GKGCMC	1 cut(s)	1000
BstV1I	GCAGC	2 cut(s)	430, 1030
BstV2I	GAAGAC	1 cut(s)	780
BsuRI	GGCC	3 cut(s)	60, 264, 998
BtgI	CCRYGG	3 cut(s)	44, 380, 435
BtsCI	GGATG	5 cut(s)	330, 416, 635, 1061, 1312
BtsI	GCAGTG	3 cut(s)	607, 820, 1048
BtsIMutI	CAGTG	4 cut(s)	607, 820, 1048, 1071
Cac8I	GCNNGC	3 cut(s)	51, 84, 710
CciI	TCATGA	1 cut(s)	759
CfoI	GCGC	1 cut(s)	388
Cfr13I	GGNCC	2 cut(s)	996, 997
Csp6I	GTAC	3 cut(s)	820, 921, 1350
CviAII	CATG	9 cut(s)	45, 218, 280, 307, 381, 436, 753, 760, 1105
CviQI	GTAC	3 cut(s)	820, 921, 1350
DdeI	CTNAG	6 cut(s)	146, 344, 869, 906, 1063, 1365
DinI	GGCGCC	1 cut(s)	387
DpnI	GATC	5 cut(s)	610, 695, 732, 758, 1130
DpnII	GATC	5 cut(s)	608, 693, 730, 756, 1128
EaeI	YGGCCR	1 cut(s)	58
Eam1104I	CTCTTC	4 cut(s)	840, 927, 1200, 1305
EarI	CTCTTC	4 cut(s)	840, 927, 1200, 1305
Eco130I	CCWWGG	4 cut(s)	44, 380, 435, 831
Eco24I	GRGCYC	1 cut(s)	1000
Eco31I	GGTCTC	1 cut(s)	576
Eco57I	CTGAAG	1 cut(s)	543
EcoO109I	RGGNCCY	1 cut(s)	997
EcoRI	GAATTC	1 cut(s)	425
EcoT14I	CCWWGG	4 cut(s)	44, 380, 435, 831
EcoT22I	ATGCAT	1 cut(s)	1116
EcoT38I	GRGCYC	1 cut(s)	1000
EgeI	GGCGCC	1 cut(s)	387
EheI	GGCGCC	1 cut(s)	387
ErhI	CCWWGG	4 cut(s)	44, 380, 435, 831
FaeI	CATG	9 cut(s)	48, 221, 283, 310, 384, 439, 756, 763, 1108
FatI	CATG	9 cut(s)	44, 217, 279, 306, 380, 435, 752, 759, 1104
Fnu4HI	GCNGC	2 cut(s)	444, 1019
FokI	GGATG	5 cut(s)	317, 403, 622, 1068, 1319
FriOI	GRGCYC	1 cut(s)	1000
Fsp4HI	GCNGC	2 cut(s)	444, 1019
FspBI	CTAG	9 cut(s)	50, 77, 83, 395, 483, 924, 1026, 1137, 1142
GlaI	GCGC	1 cut(s)	387
GluI	GCNGC	2 cut(s)	444, 1019
HaeII	RGCGCY	1 cut(s)	389
HaeIII	GGCC	3 cut(s)	60, 264, 998
HhaI	GCGC	1 cut(s)	388
Hin1I	GRCGYC	1 cut(s)	386
Hin1II	CATG	9 cut(s)	48, 221, 283, 310, 384, 439, 756, 763, 1108
Hin6I	GCGC	1 cut(s)	386
HinP1I	GCGC	1 cut(s)	386
HinfI	GANTC	4 cut(s)	554, 1045, 1339, 1361
HphI	GGTGA	3 cut(s)	421, 1196, 1231
Hpy166II	GTNNAC	2 cut(s)	285, 1294
Hpy188I	TCNGA	2 cut(s)	13, 676
Hpy188III	TCNNGA	6 cut(s)	350, 475, 631, 719, 760, 1118
Hpy8I	GTNNAC	2 cut(s)	285, 1294
HpyAV	CCTTC	5 cut(s)	513, 941, 967, 1181, 1350
HpyCH4III	ACNGT	1 cut(s)	587
HpyCH4IV	ACGT	1 cut(s)	1290
HpyCH4V	TGCA	6 cut(s)	189, 406, 600, 1018, 1114, 1198
HpyF10VI	GCNNNNNNNGC	4 cut(s)	46, 312, 879, 1004
HpyF3I	CTNAG	6 cut(s)	146, 344, 869, 906, 1063, 1365
HpySE526I	ACGT	1 cut(s)	1290
Hsp92I	GRCGYC	1 cut(s)	386
Hsp92II	CATG	9 cut(s)	48, 221, 283, 310, 384, 439, 756, 763, 1108
HspAI	GCGC	1 cut(s)	386
KasI	GGCGCC	1 cut(s)	385
Kzo9I	GATC	5 cut(s)	608, 693, 730, 756, 1128
LmnI	GCTCC	2 cut(s)	155, 835
Lsp1109I	GCAGC	2 cut(s)	430, 1030
LweI	GCATC	3 cut(s)	579, 1086, 1123
MaeI	CTAG	9 cut(s)	50, 77, 83, 395, 483, 924, 1026, 1137, 1142
MaeII	ACGT	1 cut(s)	1290
MaeIII	GTNAC	3 cut(s)	614, 939, 1046
MalI	GATC	5 cut(s)	610, 695, 732, 758, 1130
MboI	GATC	5 cut(s)	608, 693, 730, 756, 1128
MhlI	GDGCHC	2 cut(s)	607, 1000
MluCI	AATT	7 cut(s)	109, 194, 409, 425, 544, 1095, 1244
Mly113I	GGCGCC	1 cut(s)	386
MlyI	GAGTC	1 cut(s)	1054
MmeI	TCCRAC	3 cut(s)	351, 531, 1050
Mph1103I	ATGCAT	1 cut(s)	1116
MroXI	GAANNNNTTC	1 cut(s)	1338
MseI	TTAA	2 cut(s)	680, 1173
MslI	CAYNNNNRTG	3 cut(s)	434, 1026, 1109
Mva1269I	GAATGC	1 cut(s)	1021
MwoI	GCNNNNNNNGC	4 cut(s)	46, 312, 879, 1004
NarI	GGCGCC	1 cut(s)	386
NcoI	CCATGG	3 cut(s)	44, 380, 435
NdeII	GATC	5 cut(s)	608, 693, 730, 756, 1128
NheI	GCTAGC	2 cut(s)	49, 82
NlaIII	CATG	9 cut(s)	48, 221, 283, 310, 384, 439, 756, 763, 1108
NlaIV	GGNNCC	3 cut(s)	387, 998, 999
NmuCI	GTSAC	1 cut(s)	1046
NsiI	ATGCAT	1 cut(s)	1116
NspI	RCATGY	1 cut(s)	310
PagI	TCATGA	1 cut(s)	759
PctI	GAATGC	1 cut(s)	1021
PdmI	GAANNNNTTC	1 cut(s)	1338
PfeI	GAWTC	3 cut(s)	554, 1339, 1361
PkrI	GCNGC	2 cut(s)	445, 1020
PleI	GAGTC	1 cut(s)	1053
PluTI	GGCGCC	1 cut(s)	389
PpsI	GAGTC	1 cut(s)	1053
PsiI	TTATAA	1 cut(s)	896
PspN4I	GGNNCC	3 cut(s)	387, 998, 999
PspOMI	GGGCCC	1 cut(s)	996
PspPI	GGNCC	2 cut(s)	996, 997
PstI	CTGCAG	1 cut(s)	1020
RsaI	GTAC	3 cut(s)	821, 922, 1351
RsaNI	GTAC	3 cut(s)	820, 921, 1350
RseI	CAYNNNNRTG	3 cut(s)	434, 1026, 1109
SaqAI	TTAA	2 cut(s)	680, 1173
SatI	GCNGC	2 cut(s)	444, 1019
Sau3AI	GATC	5 cut(s)	608, 693, 730, 756, 1128
Sau96I	GGNCC	2 cut(s)	996, 997
ScaI	AGTACT	2 cut(s)	821, 922
SchI	GAGTC	1 cut(s)	1054
SduI	GDGCHC	2 cut(s)	607, 1000
SfaNI	GCATC	3 cut(s)	579, 1086, 1123
SfcI	CTRYAG	1 cut(s)	1016
SfoI	GGCGCC	1 cut(s)	387
SmiMI	CAYNNNNRTG	3 cut(s)	434, 1026, 1109
SmlI	CTYRAG	1 cut(s)	473
SmoI	CTYRAG	1 cut(s)	473
SpeI	ACTAGT	1 cut(s)	1141
Sse9I	AATT	7 cut(s)	109, 194, 409, 425, 544, 1095, 1244
SsiI	CCGC	2 cut(s)	242, 1053
SspDI	GGCGCC	1 cut(s)	385
SspI	AATATT	1 cut(s)	179
SspMI	CTAG	9 cut(s)	50, 77, 83, 395, 483, 924, 1026, 1137, 1142
StyI	CCWWGG	4 cut(s)	44, 380, 435, 831
TaaI	ACNGT	1 cut(s)	587
TaiI	ACGT	1 cut(s)	1293
TaqI	TCGA	2 cut(s)	506, 607
TasI	AATT	7 cut(s)	109, 194, 409, 425, 544, 1095, 1244
TatI	WGTACW	3 cut(s)	819, 920, 1349
TfiI	GAWTC	3 cut(s)	554, 1339, 1361
Tru1I	TTAA	2 cut(s)	680, 1173
Tru9I	TTAA	2 cut(s)	680, 1173
TscAI	CASTG	4 cut(s)	607, 820, 1055, 1071
TseFI	GTSAC	1 cut(s)	1046
TseI	GCWGC	2 cut(s)	443, 1018
Tsp45I	GTSAC	1 cut(s)	1046
TspDTI	ATGAA	5 cut(s)	390, 444, 776, 874, 1323
TspGWI	ACGGA	2 cut(s)	594, 873
TspRI	CASTG	4 cut(s)	607, 820, 1055, 1071
XapI	RAATTY	5 cut(s)	109, 194, 409, 425, 1244
XceI	RCATGY	1 cut(s)	310
XcmI	CCANNNNNNNNNTGG	1 cut(s)	257
XmnI	GAANNNNTTC	1 cut(s)	1338
XspI	CTAG	9 cut(s)	50, 77, 83, 395, 483, 924, 1026, 1137, 1142
ZrmI	AGTACT	2 cut(s)	821, 922
Zsp2I	ATGCAT	1 cut(s)	1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.