MD07G1067700.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0018501
Physical Location & Seq
Reverse (-)
6391947 .. 6393332
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1067700.v1.1.491

Sequence Viewer

Length: 1386 bp
ATGCTTTATCCTGATCAGAACAGAAGCATTAGCATTCTTATGCTTCCATGGTTAGGTCACGGCCATATTTCGCCCTTCCTCGAGCTAGCCAAGAAGCTCACCAGCCACAGAGATTTTCACATCTTCATTTGCTCCACACCTGTTAATCTCAGCTCCATCAAGCCCAAACTCCCTAAGAAATACTCCCACTGCATTGAGTTTGTGGAACTTCATCTTCCACACGATGAGTTGCCACCTCACTACCACACCACCAATGGCCTCCCACCCCATCTCATGCCCACTCTCAAAAAAGCCTTTGACATGTCCAGCGATAACTTCTCCCACATCCTCAAAACCCTAAAACCTGATTTGCTCGTATATGATTTTCTCCAGCCATGGGCACCGTCCCTAGCTTTGTCGCACAACATTCCGGCCGTCGAGTTCACCACCACCAGTGCTTCCTTGATGTCACTTTGGTTTCACCATCTCAAGAACCCTAATGTTCAATTCCCTTATCCTTCCATCTATCTTCGGGATTACGAAATTAAGGAGTTCAGCAATCTGATAGAATCTTCAGCAAATGGCATCACGAACGGAGAACGCGTACTGCTGTGCAGTCATCGGTCTCGTAACATCATTTTGGTAAAGACTTCTGGAGAGATTGAATCAAAGTGTGTTGATTATCTCTCCAAGTTAACGGAGAAGAAGATTGTGCCCGTTGGATCACTTGTTCAAGACCCAATGGATCAAAAAGTAGATGAGGAATCGTCGATCATCAAATGGCTAAACGAAAGGGAAAGAGCTTCAGTCGTGTTTGTGTCCTTCGGGAGCGAGTACTTTTTGTCCAAGGAGGAAATACAAGAGATAGCTCTTGGATTGGAGCTTAGCCAAGTGAGTTTCATTTGGGTTATTAGGTTTCCTAAGGAAGAGAAAAGTACCAGGGTTGAAGATGTTTTGCCAAAAGGATTTGGGGAGAGGGTAGGAGAGAGGGGAATGATAGTAGAGGATTGGGCCCCACAGGCAAAAATATTGAAGCATTCGAGTGTTGGTGGGTTTGTGAGTCACTGTGGATGGAGCTCGGTGTTGGAGAGCATCAAGTTTGGTGTTCCGATTATAGCCATGCCTATGCAACTTGACCAGCCGGTAAACGCCAGACTGGTGGAGGAGGTTGGCGTTGGTGTTGAGGTTATAAGAACCGGCGGAGGAGGTAATTTGCAACGGCAAGAGGTGGCGAAGGTGATCATAGATGTGGTGGTGGAGAAAATTGGAGAGGGTGTGAGGATAAAGGCATTGGAATTAAGAGACAACATGAAGAAGAAAGAGGATGAAGAGATGGATGGGGTGGTGGAGGAGTTGATGCAGCTTTGTACGGCGACGACAAGGGAATCAATTAGAAACTACTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

462

Amino Acids

52.23

Weight (kDa)

6.04

Isoelectric Point (pI)

47.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 9 - 233 1e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 259 - 389 6.9e-20 UDP-glucoronosyl and UDP-glucosyl transferase
EryCIII-like_C PF06722 329 - 408 8e-07 Erythromycin biosynthesis protein CIII-like, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1169
AccB1I GGYRCC 1 cut(s) 379
AccII CGCG 1 cut(s) 582
AciI CCGC 1 cut(s) 1179
AclWI GGATC 2 cut(s) 709, 732
AcoI YGGCCR 2 cut(s) 61, 411
AcuI CTGAAG 2 cut(s) 537, 768
AfaI GTAC 4 cut(s) 585, 815, 916, 1348
AfiI CCNNNNNNNGG 2 cut(s) 53, 376
AflIII ACRYGT 2 cut(s) 300, 580
AgsI TTSAA 5 cut(s) 485, 644, 713, 926, 1012
AjnI CCWGG 1 cut(s) 917
AloI GAACNNNNNNTCC 2 cut(s) 693, 725
AluBI AGCT 9 cut(s) 85, 97, 153, 392, 782, 848, 862, 1056, 1342
AluI AGCT 9 cut(s) 85, 97, 153, 392, 782, 848, 862, 1056, 1342
Alw21I GWGCWC 1 cut(s) 1058
Alw26I GTCTC 2 cut(s) 609, 1275
AlwI GGATC 2 cut(s) 709, 732
Ama87I CYCGRG 1 cut(s) 80
AoxI GGCC 4 cut(s) 61, 256, 411, 990
ApaI GGGCCC 1 cut(s) 994
ApeKI GCWGC 1 cut(s) 1339
AspS9I GGNCC 2 cut(s) 990, 991
AsuHPI GGTGA 4 cut(s) 91, 415, 452, 1228
AsuNHI GCTAGC 1 cut(s) 85
AvaI CYCGRG 1 cut(s) 80
AxyI CCTNAGG 1 cut(s) 900
BaeGI GKGCMC 3 cut(s) 382, 696, 994
BanI GGYRCC 1 cut(s) 379
BanII GRGCYC 2 cut(s) 994, 1058
Bbv12I GWGCWC 1 cut(s) 1058
BbvI GCAGC 1 cut(s) 1351
BccI CCATC 7 cut(s) 164, 276, 471, 509, 1044, 1306, 1310
BceAI ACGGC 4 cut(s) 76, 398, 1214, 1365
BciT130I CCWGG 1 cut(s) 919
BclI TGATCA 2 cut(s) 13, 1218
BcoDI GTCTC 2 cut(s) 609, 1275
BfaI CTAG 2 cut(s) 86, 389
BglI GCCNNNNNGGC 1 cut(s) 998
BisI GCNGC 1 cut(s) 1340
BlpI GCTNAGC 1 cut(s) 863
BlsI GCNGC 1 cut(s) 1341
BmcAI AGTACT 1 cut(s) 815
Bme1390I CCNGG 1 cut(s) 919
BmeT110I CYCGRG 1 cut(s) 80
BmgT120I GGNCC 2 cut(s) 990, 991
BmiI GGNNCC 3 cut(s) 381, 992, 993
BmrFI CCNGG 1 cut(s) 919
BmsI GCATC 3 cut(s) 573, 1080, 1326
BmtI GCTAGC 1 cut(s) 89
BpmI CTGGAG 2 cut(s) 353, 654
Bpu1102I GCTNAGC 1 cut(s) 863
BpuEI CTTGAG 1 cut(s) 452
BsaI GGTCTC 1 cut(s) 609
BsaJI CCNNGG 4 cut(s) 47, 374, 825, 918
BsaXI ACNNNNNCTCC 4 cut(s) 567, 597, 1239, 1269
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 376
Bse118I RCCGGY 2 cut(s) 1120, 1175
Bse1I ACTGG 2 cut(s) 432, 1140
Bse21I CCTNAGG 1 cut(s) 900
BseBI CCWGG 1 cut(s) 919
BseDI CCNNGG 4 cut(s) 47, 374, 825, 918
BseGI GGATG 4 cut(s) 324, 1055, 1309, 1321
BseLI CCNNNNNNNGG 2 cut(s) 53, 376
BseMII CTCAG 1 cut(s) 163
BseNI ACTGG 2 cut(s) 432, 1140
BseRI GAGGAG 3 cut(s) 1157, 1197, 1343
BseSI GKGCMC 3 cut(s) 382, 696, 994
BseX3I CGGCCG 1 cut(s) 411
BseXI GCAGC 1 cut(s) 1351
BsgI GTGCAG 1 cut(s) 613
Bsh1236I CGCG 1 cut(s) 582
Bsh1285I CGRYCG 1 cut(s) 414
BshFI GGCC 4 cut(s) 63, 258, 413, 992
BshNI GGYRCC 1 cut(s) 379
BsiEI CGRYCG 1 cut(s) 414
BsiHKAI GWGCWC 1 cut(s) 1058
BsiHKCI CYCGRG 1 cut(s) 80
BsiSI CCGG 3 cut(s) 410, 1121, 1176
BslFI GGGAC 1 cut(s) 370
BslI CCNNNNNNNGG 2 cut(s) 53, 376
BsmAI GTCTC 2 cut(s) 609, 1275
BsmFI GGGAC 1 cut(s) 370
BsmI GAATGC 2 cut(s) 33, 1015
BsnI GGCC 4 cut(s) 63, 258, 413, 992
Bso31I GGTCTC 1 cut(s) 609
BsoBI CYCGRG 1 cut(s) 80
Bsp120I GGGCCC 1 cut(s) 990
Bsp1286I GDGCHC 4 cut(s) 382, 696, 994, 1058
Bsp143I GATC 5 cut(s) 13, 701, 724, 750, 1218
Bsp1720I GCTNAGC 1 cut(s) 863
Bsp19I CCATGG 2 cut(s) 47, 374
BspACI CCGC 1 cut(s) 1179
BspANI GGCC 4 cut(s) 63, 258, 413, 992
BspCNI CTCAG 1 cut(s) 162
BspFNI CGCG 1 cut(s) 582
BspLI GGNNCC 3 cut(s) 381, 992, 993
BspOI GCTAGC 1 cut(s) 89
BspPI GGATC 2 cut(s) 709, 732
BspT107I GGYRCC 1 cut(s) 379
BspTNI GGTCTC 1 cut(s) 609
BsrFI RCCGGY 2 cut(s) 1120, 1175
BsrI ACTGG 2 cut(s) 432, 1140
BssAI RCCGGY 2 cut(s) 1120, 1175
BssECI CCNNGG 4 cut(s) 47, 374, 825, 918
BssMI GATC 5 cut(s) 13, 701, 724, 750, 1218
BssT1I CCWWGG 3 cut(s) 47, 374, 825
Bst2UI CCWGG 1 cut(s) 919
Bst4CI ACNGT 2 cut(s) 384, 1046
Bst6I CTCTTC 2 cut(s) 900, 1302
BstC8I GCNNGC 1 cut(s) 87
BstDEI CTNAG 4 cut(s) 149, 174, 863, 900
BstDSI CCRYGG 2 cut(s) 47, 374
BstF5I GGATG 4 cut(s) 324, 1055, 1309, 1321
BstFNI CGCG 1 cut(s) 582
BstKTI GATC 5 cut(s) 16, 704, 727, 753, 1221
BstMAI GTCTC 2 cut(s) 609, 1275
BstMBI GATC 5 cut(s) 13, 701, 724, 750, 1218
BstMCI CGRYCG 1 cut(s) 414
BstMWI GCNNNNNNNGC 1 cut(s) 998
BstNI CCWGG 1 cut(s) 919
BstNSI RCATGY 1 cut(s) 304
BstSCI CCNGG 1 cut(s) 917
BstSLI GKGCMC 3 cut(s) 382, 696, 994
BstUI CGCG 1 cut(s) 582
BstV1I GCAGC 1 cut(s) 1351
BstXI CCANNNNNNTGG 1 cut(s) 1138
BstZI CGGCCG 1 cut(s) 411
Bsu36I CCTNAGG 1 cut(s) 900
BsuRI GGCC 4 cut(s) 63, 258, 413, 992
BtgI CCRYGG 2 cut(s) 47, 374
BtsCI GGATG 4 cut(s) 324, 1055, 1309, 1321
BtsI GCAGTG 1 cut(s) 187
BtsIMutI CAGTG 3 cut(s) 187, 439, 1042
Cac8I GCNNGC 1 cut(s) 87
Cfr10I RCCGGY 2 cut(s) 1120, 1175
Cfr13I GGNCC 2 cut(s) 990, 991
Csp6I GTAC 4 cut(s) 584, 814, 915, 1347
CviAII CATG 6 cut(s) 48, 274, 301, 375, 1099, 1288
CviQI GTAC 4 cut(s) 584, 814, 915, 1347
DdeI CTNAG 4 cut(s) 149, 174, 863, 900
DpnI GATC 5 cut(s) 15, 703, 726, 752, 1220
DpnII GATC 5 cut(s) 13, 701, 724, 750, 1218
EaeI YGGCCR 2 cut(s) 61, 411
EagI CGGCCG 1 cut(s) 411
Eam1104I CTCTTC 2 cut(s) 900, 1302
EarI CTCTTC 2 cut(s) 900, 1302
EciI GGCGGA 1 cut(s) 1194
Ecl136II GAGCTC 1 cut(s) 1056
EclXI CGGCCG 1 cut(s) 411
Eco130I CCWWGG 3 cut(s) 47, 374, 825
Eco24I GRGCYC 2 cut(s) 994, 1058
Eco31I GGTCTC 1 cut(s) 609
Eco52I CGGCCG 1 cut(s) 411
Eco53kI GAGCTC 1 cut(s) 1056
Eco57I CTGAAG 2 cut(s) 537, 768
Eco81I CCTNAGG 1 cut(s) 900
Eco88I CYCGRG 1 cut(s) 80
EcoICRI GAGCTC 1 cut(s) 1056
EcoO109I RGGNCCY 1 cut(s) 991
EcoRII CCWGG 1 cut(s) 917
EcoT14I CCWWGG 3 cut(s) 47, 374, 825
EcoT38I GRGCYC 2 cut(s) 994, 1058
ErhI CCWWGG 3 cut(s) 47, 374, 825
FaeI CATG 6 cut(s) 51, 277, 304, 378, 1102, 1291
FaqI GGGAC 1 cut(s) 370
FatI CATG 6 cut(s) 47, 273, 300, 374, 1098, 1287
FbaI TGATCA 2 cut(s) 13, 1218
Fnu4HI GCNGC 1 cut(s) 1340
FokI GGATG 4 cut(s) 311, 1062, 1316, 1328
FriOI GRGCYC 2 cut(s) 994, 1058
Fsp4HI GCNGC 1 cut(s) 1340
FspBI CTAG 2 cut(s) 86, 389
GluI GCNGC 1 cut(s) 1340
GsuI CTGGAG 2 cut(s) 353, 654
HaeIII GGCC 4 cut(s) 63, 258, 413, 992
HapII CCGG 3 cut(s) 410, 1121, 1176
Hin1II CATG 6 cut(s) 51, 277, 304, 378, 1102, 1291
HincII GTYRAC 1 cut(s) 675
HindII GTYRAC 1 cut(s) 675
HinfI GANTC 5 cut(s) 548, 644, 743, 1039, 1364
HpaI GTTAAC 1 cut(s) 675
HpaII CCGG 3 cut(s) 410, 1121, 1176
HphI GGTGA 4 cut(s) 91, 415, 452, 1228
Hpy166II GTNNAC 3 cut(s) 423, 675, 1126
Hpy188I TCNGA 3 cut(s) 18, 543, 1089
Hpy188III TCNNGA 7 cut(s) 11, 469, 512, 568, 633, 713, 805
Hpy8I GTNNAC 3 cut(s) 423, 675, 1126
Hpy99I CGWCG 3 cut(s) 419, 751, 1357
HpyAV CCTTC 4 cut(s) 85, 507, 811, 1207
HpyCH4III ACNGT 2 cut(s) 384, 1046
HpyCH4V TGCA 5 cut(s) 192, 594, 1108, 1195, 1339
HpyF10VI GCNNNNNNNGC 1 cut(s) 998
HpyF3I CTNAG 4 cut(s) 149, 174, 863, 900
Hsp92II CATG 6 cut(s) 51, 277, 304, 378, 1102, 1291
Ksp22I TGATCA 2 cut(s) 13, 1218
KspAI GTTAAC 1 cut(s) 675
Kzo9I GATC 5 cut(s) 13, 701, 724, 750, 1218
LmnI GCTCC 5 cut(s) 137, 158, 807, 859, 1053
Lsp1109I GCAGC 1 cut(s) 1351
LweI GCATC 3 cut(s) 573, 1080, 1326
MaeI CTAG 2 cut(s) 86, 389
MaeIII GTNAC 4 cut(s) 56, 447, 608, 1040
MalI GATC 5 cut(s) 15, 703, 726, 752, 1220
MboI GATC 5 cut(s) 13, 701, 724, 750, 1218
MhlI GDGCHC 4 cut(s) 382, 696, 994, 1058
MluCI AATT 6 cut(s) 485, 522, 1189, 1242, 1274, 1368
MluI ACGCGT 1 cut(s) 580
MlyI GAGTC 1 cut(s) 1048
MmeI TCCRAC 2 cut(s) 679, 1044
MseI TTAA 5 cut(s) 144, 525, 674, 1277, 1384
MslI CAYNNNNRTG 4 cut(s) 38, 1020, 1103, 1226
MspI CCGG 3 cut(s) 410, 1121, 1176
MspR9I CCNGG 1 cut(s) 919
Mva1269I GAATGC 2 cut(s) 33, 1015
MvaI CCWGG 1 cut(s) 919
MvnI CGCG 1 cut(s) 582
MwoI GCNNNNNNNGC 1 cut(s) 998
NcoI CCATGG 2 cut(s) 47, 374
NdeII GATC 5 cut(s) 13, 701, 724, 750, 1218
NheI GCTAGC 1 cut(s) 85
NlaIII CATG 6 cut(s) 51, 277, 304, 378, 1102, 1291
NlaIV GGNNCC 3 cut(s) 381, 992, 993
NmuCI GTSAC 3 cut(s) 56, 447, 1040
NspI RCATGY 1 cut(s) 304
PaeR7I CTCGAG 1 cut(s) 80
PciI ACATGT 1 cut(s) 300
PcsI WCGNNNNNNNCGW 1 cut(s) 579
PctI GAATGC 2 cut(s) 33, 1015
PfeI GAWTC 4 cut(s) 548, 644, 743, 1364
PkrI GCNGC 1 cut(s) 1341
PleI GAGTC 1 cut(s) 1047
PpsI GAGTC 1 cut(s) 1047
PscI ACATGT 1 cut(s) 300
PsiI TTATAA 1 cut(s) 1169
Psp124BI GAGCTC 1 cut(s) 1058
Psp6I CCWGG 1 cut(s) 917
PspGI CCWGG 1 cut(s) 917
PspN4I GGNNCC 3 cut(s) 381, 992, 993
PspOMI GGGCCC 1 cut(s) 990
PspPI GGNCC 2 cut(s) 990, 991
PspXI VCTCGAGB 1 cut(s) 80
RsaI GTAC 4 cut(s) 585, 815, 916, 1348
RsaNI GTAC 4 cut(s) 584, 814, 915, 1347
RseI CAYNNNNRTG 4 cut(s) 38, 1020, 1103, 1226
SacI GAGCTC 1 cut(s) 1058
SaqAI TTAA 5 cut(s) 144, 525, 674, 1277, 1384
SatI GCNGC 1 cut(s) 1340
Sau3AI GATC 5 cut(s) 13, 701, 724, 750, 1218
Sau96I GGNCC 2 cut(s) 990, 991
ScaI AGTACT 1 cut(s) 815
SchI GAGTC 1 cut(s) 1048
ScrFI CCNGG 1 cut(s) 919
SduI GDGCHC 4 cut(s) 382, 696, 994, 1058
SfaNI GCATC 3 cut(s) 573, 1080, 1326
Sfr274I CTCGAG 1 cut(s) 80
SlaI CTCGAG 1 cut(s) 80
SmiMI CAYNNNNRTG 4 cut(s) 38, 1020, 1103, 1226
SmlI CTYRAG 2 cut(s) 80, 467
SmoI CTYRAG 2 cut(s) 80, 467
Sse9I AATT 6 cut(s) 485, 522, 1189, 1242, 1274, 1368
SsiI CCGC 1 cut(s) 1179
SspI AATATT 1 cut(s) 1008
SspMI CTAG 2 cut(s) 86, 389
SstI GAGCTC 1 cut(s) 1058
StyD4I CCNGG 1 cut(s) 917
StyI CCWWGG 3 cut(s) 47, 374, 825
TaaI ACNGT 2 cut(s) 384, 1046
TaqI TCGA 4 cut(s) 81, 417, 749, 1019
TaqII GACCGA 1 cut(s) 591
TasI AATT 6 cut(s) 485, 522, 1189, 1242, 1274, 1368
TatI WGTACW 1 cut(s) 813
TfiI GAWTC 4 cut(s) 548, 644, 743, 1364
Tru1I TTAA 5 cut(s) 144, 525, 674, 1277, 1384
Tru9I TTAA 5 cut(s) 144, 525, 674, 1277, 1384
TscAI CASTG 3 cut(s) 194, 439, 1049
TseFI GTSAC 3 cut(s) 56, 447, 1040
TseI GCWGC 1 cut(s) 1339
Tsp45I GTSAC 3 cut(s) 56, 447, 1040
TspDTI ATGAA 5 cut(s) 115, 200, 868, 1304, 1320
TspGWI ACGGA 2 cut(s) 588, 692
TspRI CASTG 3 cut(s) 194, 439, 1049
XceI RCATGY 1 cut(s) 304
XcmI CCANNNNNNNNNTGG 1 cut(s) 251
XhoI CTCGAG 1 cut(s) 80
XspI CTAG 2 cut(s) 86, 389
ZrmI AGTACT 1 cut(s) 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.