Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0010341

Physical Location & Seq

Genomic Coordinates Reverse (-)

2031736 .. 2037710

Gene Structure 5975 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1024500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGCCGCCGAACGACGACGTTCGGTTCACTTCGTCTCCTTCCGCCAAAGTCCCTCGCTCTCCCGAAAATCGACACGTGGACCTCACAGTTCTGTTCGCGAGGACCAGAAACTCGTTTTCCCAACTCATCGACTCGCTTAGGACTCGTACTTCTTTCCCAAAGTTCCCTCCTTTGCCCATCCTCTGCTCCGCGTCGCTGTCGCTGACTCGGCCAGCCGACTCGTCAGAGTCCGAGTCGCGAAATCGGAATGCGGACCGGGGCCAGTTCGTAGGGAAGTCGCCTCTTTTATGCTCGGCGTCGCTGGCTCTGACTCGGCCGGACGAGTCGATTCAGTCGCAGCAGAAGGGACACGCTTCCAGTCGGCACGATGAGGAGAGGGTTTTGATAAGCGAGGTGCTGGTGAGGAACAAGGACGGGGAGGAGCTGGAAAGGAAGGACCTTGAAATGGAGGCGTTGGCTGCTCTCAAGGCGTGCCGAGCGAACTCGGCGCTAACTGTGCGGGAGGTCCAGGAGGACGTGCATAGGATCATCGATAGTGGCTATTTCTGCTCCTGCATGCCGGTCGCCGTCGATACAAGGGACGGCATCAGATTGATCTTTCAGGTAAAACCAAACCAGGAATTCCAAGGGCTAGTATGTGAAGGGGCAAATGTTCTTCCAGCAAAGTTTCTGAAGGATGCATTCTGTGATGGATATGGAAAAGTTATTAATCTTAAGCGTTTGAATGAAGTAATATCTTCCATCAATGATTGGTACATGGATCGGGGCCTTTTTGCCATGGTTTCAGCTGTTGAGATTCTCTCAGGTGGTATTCTTAAGTTACAAGTATCAGAAACTGAGGTGAATAATATCTCCATGCGATTCCTTGACAGGAAGACGGGTGAACCAACCATAGGGAAGACAAAGCCCGACACGATACTTCGCCAACTTACTACTAAGAAGGGCCAGGTCTACAGTATGTTACAGGGAAAAAGAGATGTAGAGACTGTATTGACTATGGGACTTATGGAAGATGTTAGCATCATACCCCAACCAGCAGATGCTGGTAAGGTTGATATCACAATGAATGTTGTTGAGCGGCCAAGTGGAGGGTTTTCTGCTGGTGGTGGTATATCAAGTGGAATTACAAGCGGCCCTCTGTCAGGACTCATTGGAAGCTTTGCATATTCTCATAGGAATCTCTTCGGAAGAAACCAAAAGCTACACGTTTCCTTAGAGAGGGGCCAGATAGACTCGATTTTTCGCATAAATTACTCAGATCCATGGATTGCAGGAGATGATAAGCGGACATCCAGGACCATAATGGTTCAGAATTCAACAACCCCCGGAACACTTATCCATGGTAACCAACTAAATGGTAGCAACTTGACCATTGGTCGCGTCACAGCGGGTATTGAATTTAGCCGACCAATAAGACCAAAGTTTAGTGGAACAGCTGGGCTTATCTTTCAGCATGCTGGTGCTCGTGACGAGAAAGGAGATCCTATTATCAAGGATGTCTACAGCAGCCCTCTAACTGCAAGTGGCAATACTCATGATGATATGCTCCTTGCTAAACTTGAGAGTGTCTACACGGGTTCTGGTGACCATGGGTCGTCAATGTGTGTTTTCAACGTGGAACAAGGACTTCCTGTTTTGCCTGAATGGTTGTATTTCAACAGAATAAATGCTCGCGCCAGGAAAGACGTAGAACTTGGTCCTACTCGTGTTCTTGTAAGTTTGTCTGGTGGCCATGTGGTTGGTAACTTCCCACCACATGAAGCATTTGGCATCGGTGGAACAAATAGTGTAAGAGGTTACGAAGAAGGTGCTGTGGGCTCTGGGAGATCTTATGCAGTTGGCTCTGGAGAAATTTCTTTTCCAATGATAGGGCCAGTTGGAGGAGTTATTTTTGCTGACTACGGCACTGATCTTGGATCAGGCCCCACCGTGCCTGGTGATCCTGCCGGGGCTCGGCATAAGCCTGGAAGCGGGTACGGATATGGATTTGGCATCAGACTCGACTCACCGCTGGGGCCTCTTCGCCTTGAATACGCATTTAACGATCAGCATGCAAAGAGATTTCACTTTGGGGTCGGACATCGGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag POTRA

Protein Analysis

697

Amino Acids

75.48

Weight (kDa)

8.03

Isoelectric Point (pI)

36.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Omp85	PF01103	393 - 695	8.2e-60	Omp85 superfamily domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19620
fragaria_vesca	FvH4_3g43030 FvH4_3g43030 FvH4_3g43030 FvH4_3g43030
malus_domestica	MD03G1024500.v1.1 MD11G1029600.v1.1
prunus_persica	Prupe.6G023900_v2.0.a1 Prupe.6G023900_v2.0.a1
pyrus_communis	pycom03g02130 pycom11g02310
rosa_chinensis	RchiOBHm_Chr5g0077091
rosa_laevigata	RLG00000036659
rosa_multiflora	Rmu_co8452603.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005020
rosa_rugosa	Rorug05G0451500
rosa_samantha	Rh5AG505600 Rh5BG527600 Rh5CG551900 Rh5DG540000
rosa_wichuraiana	Rw5G047070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1078
AccI	GTMKAC	3 cut(s)	951, 1500, 1569
AccII	CGCG	5 cut(s)	98, 191, 238, 1380, 1674
AclWI	GGATC	6 cut(s)	533, 768, 1253, 1475, 1924, 1934
AcoI	YGGCCR	4 cut(s)	209, 314, 1079, 1729
AcsI	RAATTY	4 cut(s)	620, 1312, 1397, 1851
AcuI	CTGAAG	1 cut(s)	692
AcvI	CACGTG	1 cut(s)	76
AcyI	GRCGYC	1 cut(s)	296
AfaI	GTAC	3 cut(s)	148, 755, 1976
AfiI	CCNNNNNNNGG	9 cut(s)	445, 893, 1088, 1142, 1218, 1868, 1880, 1953, 1970
AflII	CTTAAG	2 cut(s)	713, 815
AflIII	ACRYGT	2 cut(s)	73, 1204
AgsI	TTSAA	7 cut(s)	443, 724, 1317, 1397, 1612, 1657, 2030
AhdI	GACNNNNNGTC	2 cut(s)	1374, 1591
AjiI	CACGTC	1 cut(s)	517
AjnI	CCWGG	7 cut(s)	507, 615, 945, 1292, 1676, 1933, 1963
AluBI	AGCT	5 cut(s)	424, 788, 1158, 1201, 1436
AluI	AGCT	5 cut(s)	424, 788, 1158, 1201, 1436
Alw21I	GWGCWC	1 cut(s)	1465
Alw26I	GTCTC	2 cut(s)	39, 977
AlwI	GGATC	6 cut(s)	533, 768, 1253, 1475, 1924, 1934
AlwNI	CAGNNNCTG	2 cut(s)	836, 1043
ApeKI	GCWGC	3 cut(s)	337, 458, 1506
ApoI	RAATTY	4 cut(s)	620, 1312, 1397, 1851
AseI	ATTAAT	1 cut(s)	708
Asp700I	GAANNNNTTC	1 cut(s)	1181
AspLEI	GCGC	2 cut(s)	490, 1676
AsuC2I	CCSGG	3 cut(s)	257, 1326, 1948
AsuHPI	GGTGA	6 cut(s)	412, 853, 893, 1595, 1949, 1998
AvaII	GGWCC	7 cut(s)	79, 102, 253, 436, 505, 1296, 1697
BalI	TGGCCA	1 cut(s)	1731
BanII	GRGCYC	2 cut(s)	1820, 1954
BauI	CACGAG	2 cut(s)	1464, 1704
BbrPI	CACGTG	1 cut(s)	76
BbsI	GAAGAC	2 cut(s)	881, 905
Bbv12I	GWGCWC	1 cut(s)	1465
BbvI	GCAGC	3 cut(s)	349, 445, 1518
BccI	CCATC	3 cut(s)	185, 683, 749
BceAI	ACGGC	3 cut(s)	551, 598, 1918
BcgI	CGANNNNNNTGC	8 cut(s)	544, 578, 1790, 1824, 1981, 2015, 2033, 2067
BciT130I	CCWGG	7 cut(s)	509, 617, 947, 1294, 1678, 1935, 1965
BcnI	CCSGG	3 cut(s)	257, 1326, 1948
BcoDI	GTCTC	2 cut(s)	39, 977
BfaI	CTAG	2 cut(s)	632, 2089
BfmI	CTRYAG	2 cut(s)	952, 1501
BfoI	RGCGCY	1 cut(s)	491
BfrI	CTTAAG	2 cut(s)	713, 815
BglII	AGATCT	1 cut(s)	1826
BisI	GCNGC	6 cut(s)	5, 338, 459, 1079, 1132, 1507
BlsI	GCNGC	6 cut(s)	6, 339, 460, 1080, 1133, 1508
Bme18I	GGWCC	7 cut(s)	79, 102, 253, 436, 505, 1296, 1697
BmeRI	GACNNNNNGTC	2 cut(s)	1374, 1591
BmgBI	CACGTC	1 cut(s)	517
BmiI	GGNNCC	5 cut(s)	260, 767, 1223, 1924, 2016
BmsI	GCATC	6 cut(s)	594, 667, 1029, 1030, 1779, 2001
BpiI	GAAGAC	2 cut(s)	881, 905
BplI	GAGNNNNNCTC	2 cut(s)	785, 817
BpmI	CTGGAG	1 cut(s)	1866
Bpu10I	CCTNAGC	1 cut(s)	137
BpuEI	CTTGAG	2 cut(s)	449, 1580
BpuMI	CCSGG	3 cut(s)	257, 1326, 1948
Bsa29I	ATCGAT	1 cut(s)	531
BsaAI	YACGTR	1 cut(s)	76
BsaHI	GRCGYC	1 cut(s)	296
BsaJI	CCNNGG	8 cut(s)	256, 625, 777, 1262, 1324, 1339, 1588, 1947
BsaXI	ACNNNNNCTCC	2 cut(s)	19, 49
Bsc4I	CCNNNNNNNGG	9 cut(s)	445, 893, 1088, 1142, 1218, 1868, 1880, 1953, 1970
Bse118I	RCCGGY	1 cut(s)	559
Bse1I	ACTGG	3 cut(s)	262, 357, 1874
BseBI	CCWGG	7 cut(s)	509, 617, 947, 1294, 1678, 1935, 1965
BseCI	ATCGAT	1 cut(s)	531
BseDI	CCNNGG	8 cut(s)	256, 625, 777, 1262, 1324, 1339, 1588, 1947
BseGI	GGATG	4 cut(s)	177, 682, 1289, 1501
BseLI	CCNNNNNNNGG	9 cut(s)	445, 893, 1088, 1142, 1218, 1868, 1880, 1953, 1970
BseMII	CTCAG	3 cut(s)	816, 828, 1269
BseNI	ACTGG	3 cut(s)	262, 357, 1874
BseRI	GAGGAG	3 cut(s)	386, 434, 1896
BseX3I	CGGCCG	1 cut(s)	314
BseXI	GCAGC	3 cut(s)	349, 445, 1518
BseYI	CCCAGC	2 cut(s)	1436, 2011
Bsh1236I	CGCG	5 cut(s)	98, 191, 238, 1380, 1674
Bsh1285I	CGRYCG	2 cut(s)	317, 564
BshVI	ATCGAT	1 cut(s)	531
BsiEI	CGRYCG	2 cut(s)	317, 564
BsiHKAI	GWGCWC	1 cut(s)	1465
BsiSI	CCGG	5 cut(s)	256, 317, 560, 1326, 1947
BslFI	GGGAC	4 cut(s)	35, 360, 593, 1014
BslI	CCNNNNNNNGG	9 cut(s)	445, 893, 1088, 1142, 1218, 1868, 1880, 1953, 1970
BsmAI	GTCTC	2 cut(s)	39, 977
BsmBI	CGTCTC	1 cut(s)	39
BsmFI	GGGAC	4 cut(s)	35, 360, 593, 1014
BsmI	GAATGC	2 cut(s)	253, 680
Bsp1286I	GDGCHC	3 cut(s)	1465, 1820, 1954
Bsp19I	CCATGG	4 cut(s)	777, 1262, 1339, 1588
Bsp68I	TCGCGA	2 cut(s)	98, 238
BspCNI	CTCAG	3 cut(s)	815, 829, 1268
BspDI	ATCGAT	1 cut(s)	531
BspFNI	CGCG	5 cut(s)	98, 191, 238, 1380, 1674
BspHI	TCATGA	1 cut(s)	1534
BspLI	GGNNCC	5 cut(s)	260, 767, 1223, 1924, 2016
BspPI	GGATC	6 cut(s)	533, 768, 1253, 1475, 1924, 1934
BspTI	CTTAAG	2 cut(s)	713, 815
BsrBI	CCGCTC	1 cut(s)	1078
BsrFI	RCCGGY	1 cut(s)	559
BsrI	ACTGG	3 cut(s)	262, 357, 1874
BssAI	RCCGGY	1 cut(s)	559
BssECI	CCNNGG	8 cut(s)	256, 625, 777, 1262, 1324, 1339, 1588, 1947
BssNI	GRCGYC	1 cut(s)	296
BssSI	CACGAG	2 cut(s)	1464, 1704
BssT1I	CCWWGG	5 cut(s)	625, 777, 1262, 1339, 1588
Bst2BI	CACGAG	2 cut(s)	1464, 1704
Bst2UI	CCWGG	7 cut(s)	509, 617, 947, 1294, 1678, 1935, 1965
Bst4CI	ACNGT	5 cut(s)	88, 496, 956, 988, 1930
Bst6I	CTCTTC	2 cut(s)	1187, 2025
BstACI	GRCGYC	1 cut(s)	296
BstAFI	CTTAAG	2 cut(s)	713, 815
BstBAI	YACGTR	1 cut(s)	76
BstC8I	GCNNGC	7 cut(s)	213, 303, 472, 557, 1455, 1672, 2052
BstDEI	CTNAG	6 cut(s)	137, 802, 837, 936, 1213, 1255
BstDSI	CCRYGG	4 cut(s)	777, 1262, 1339, 1588
BstEII	GGTNACC	2 cut(s)	1343, 1583
BstENI	CCTNNNNNAGG	2 cut(s)	1140, 1216
BstF5I	GGATG	4 cut(s)	177, 682, 1289, 1501
BstFNI	CGCG	5 cut(s)	98, 191, 238, 1380, 1674
BstH2I	RGCGCY	1 cut(s)	491
BstHHI	GCGC	2 cut(s)	490, 1676
BstMAI	GTCTC	2 cut(s)	39, 977
BstMCI	CGRYCG	2 cut(s)	317, 564
BstMWI	GCNNNNNNNGC	8 cut(s)	208, 302, 458, 467, 476, 485, 496, 546
BstNI	CCWGG	7 cut(s)	509, 617, 947, 1294, 1678, 1935, 1965
BstNSI	RCATGY	3 cut(s)	559, 1457, 2054
BstPI	GGTNACC	2 cut(s)	1343, 1583
BstSFI	CTRYAG	2 cut(s)	952, 1501
BstUI	CGCG	5 cut(s)	98, 191, 238, 1380, 1674
BstV1I	GCAGC	3 cut(s)	349, 445, 1518
BstV2I	GAAGAC	2 cut(s)	881, 905
BstX2I	RGATCY	3 cut(s)	1258, 1480, 1826
BstXI	CCANNNNNNTGG	2 cut(s)	1355, 1739
BstYI	RGATCY	3 cut(s)	1258, 1480, 1826
BstZI	CGGCCG	1 cut(s)	314
Bsu15I	ATCGAT	1 cut(s)	531
BsuTUI	ATCGAT	1 cut(s)	531
BtgI	CCRYGG	4 cut(s)	777, 1262, 1339, 1588
BtrI	CACGTC	1 cut(s)	517
BtsCI	GGATG	4 cut(s)	177, 682, 1289, 1501
BtsIMutI	CAGTG	1 cut(s)	1905
BtuMI	TCGCGA	2 cut(s)	98, 238
Cac8I	GCNNGC	7 cut(s)	213, 303, 472, 557, 1455, 1672, 2052
CaiI	CAGNNNCTG	2 cut(s)	836, 1043
CciI	TCATGA	1 cut(s)	1534
CfoI	GCGC	2 cut(s)	490, 1676
Cfr10I	RCCGGY	1 cut(s)	559
ClaI	ATCGAT	1 cut(s)	531
CpoI	CGGWCCG	1 cut(s)	253
CseI	GACGC	3 cut(s)	180, 285, 1369
Csp6I	GTAC	3 cut(s)	147, 754, 1975
CspI	CGGWCCG	1 cut(s)	253
CviQI	GTAC	3 cut(s)	147, 754, 1975
DdeI	CTNAG	6 cut(s)	137, 802, 837, 936, 1213, 1255
DriI	GACNNNNNGTC	2 cut(s)	1374, 1591
EaeI	YGGCCR	4 cut(s)	209, 314, 1079, 1729
EagI	CGGCCG	1 cut(s)	314
Eam1104I	CTCTTC	2 cut(s)	1187, 2025
Eam1105I	GACNNNNNGTC	2 cut(s)	1374, 1591
EarI	CTCTTC	2 cut(s)	1187, 2025
EciI	GGCGGA	1 cut(s)	31
EclXI	CGGCCG	1 cut(s)	314
Eco130I	CCWWGG	5 cut(s)	625, 777, 1262, 1339, 1588
Eco24I	GRGCYC	2 cut(s)	1820, 1954
Eco32I	GATATC	1 cut(s)	1057
Eco47I	GGWCC	7 cut(s)	79, 102, 253, 436, 505, 1296, 1697
Eco52I	CGGCCG	1 cut(s)	314
Eco57I	CTGAAG	1 cut(s)	692
Eco72I	CACGTG	1 cut(s)	76
Eco91I	GGTNACC	2 cut(s)	1343, 1583
EcoNI	CCTNNNNNAGG	2 cut(s)	1140, 1216
EcoO109I	RGGNCCY	4 cut(s)	436, 766, 1922, 2015
EcoO65I	GGTNACC	2 cut(s)	1343, 1583
EcoRI	GAATTC	2 cut(s)	620, 1312
EcoRII	CCWGG	7 cut(s)	507, 615, 945, 1292, 1676, 1933, 1963
EcoRV	GATATC	1 cut(s)	1057
EcoT14I	CCWWGG	5 cut(s)	625, 777, 1262, 1339, 1588
EcoT22I	ATGCAT	1 cut(s)	682
EcoT38I	GRGCYC	2 cut(s)	1820, 1954
ErhI	CCWWGG	5 cut(s)	625, 777, 1262, 1339, 1588
Esp3I	CGTCTC	1 cut(s)	39
FaqI	GGGAC	4 cut(s)	35, 360, 593, 1014
FauI	CCCGC	3 cut(s)	492, 1381, 1964
FblI	GTMKAC	3 cut(s)	951, 1500, 1569
Fnu4HI	GCNGC	6 cut(s)	5, 338, 459, 1079, 1132, 1507
FokI	GGATG	4 cut(s)	164, 689, 1276, 1508
FriOI	GRGCYC	2 cut(s)	1820, 1954
Fsp4HI	GCNGC	6 cut(s)	5, 338, 459, 1079, 1132, 1507
FspBI	CTAG	2 cut(s)	632, 2089
GlaI	GCGC	2 cut(s)	489, 1675
GluI	GCNGC	6 cut(s)	5, 338, 459, 1079, 1132, 1507
GsaI	CCCAGC	2 cut(s)	1440, 2015
GsuI	CTGGAG	1 cut(s)	1866
HaeII	RGCGCY	1 cut(s)	491
HapII	CCGG	5 cut(s)	256, 317, 560, 1326, 1947
HgaI	GACGC	3 cut(s)	180, 285, 1369
HhaI	GCGC	2 cut(s)	490, 1676
Hin1I	GRCGYC	1 cut(s)	296
Hin6I	GCGC	2 cut(s)	488, 1674
HinP1I	GCGC	2 cut(s)	488, 1674
HindIII	AAGCTT	1 cut(s)	1156
HpaII	CCGG	5 cut(s)	256, 317, 560, 1326, 1947
HphI	GGTGA	6 cut(s)	412, 853, 893, 1595, 1949, 1998
Hpy166II	GTNNAC	6 cut(s)	27, 79, 884, 952, 1501, 1570
Hpy188III	TCNNGA	7 cut(s)	62, 97, 237, 1143, 1466, 1535, 1845
Hpy8I	GTNNAC	6 cut(s)	27, 79, 884, 952, 1501, 1570
Hpy99I	CGWCG	5 cut(s)	17, 20, 196, 301, 572
HpyAV	CCTTC	7 cut(s)	48, 337, 427, 635, 667, 934, 1799
HpyCH4III	ACNGT	5 cut(s)	88, 496, 956, 988, 1930
HpyCH4IV	ACGT	6 cut(s)	18, 75, 516, 1206, 1614, 1686
HpyCH4V	TGCA	8 cut(s)	520, 555, 680, 1163, 1271, 1520, 1835, 2054
HpyF10VI	GCNNNNNNNGC	8 cut(s)	208, 302, 458, 467, 476, 485, 496, 546
HpyF3I	CTNAG	6 cut(s)	137, 802, 837, 936, 1213, 1255
HpySE526I	ACGT	6 cut(s)	18, 75, 516, 1206, 1614, 1686
Hsp92I	GRCGYC	1 cut(s)	296
HspAI	GCGC	2 cut(s)	488, 1674
LmnI	GCTCC	4 cut(s)	191, 421, 554, 1551
Lsp1109I	GCAGC	3 cut(s)	349, 445, 1518
LweI	GCATC	6 cut(s)	594, 667, 1029, 1030, 1779, 2001
MaeI	CTAG	2 cut(s)	632, 2089
MaeII	ACGT	6 cut(s)	18, 75, 516, 1206, 1614, 1686
MaeIII	GTNAC	8 cut(s)	819, 960, 1343, 1381, 1466, 1583, 1742, 1796
MbiI	CCGCTC	1 cut(s)	1078
MboII	GAAGA	9 cut(s)	647, 729, 886, 910, 1022, 1174, 1200, 1814, 2012
MflI	RGATCY	3 cut(s)	1258, 1480, 1826
MhlI	GDGCHC	3 cut(s)	1465, 1820, 1954
MlsI	TGGCCA	1 cut(s)	1731
MluCI	AATT	6 cut(s)	620, 1122, 1249, 1312, 1397, 1851
MluNI	TGGCCA	1 cut(s)	1731
MmeI	TCCRAC	2 cut(s)	1858, 2056
Mox20I	TGGCCA	1 cut(s)	1731
Mph1103I	ATGCAT	1 cut(s)	682
MroXI	GAANNNNTTC	1 cut(s)	1181
MscI	TGGCCA	1 cut(s)	1731
MseI	TTAA	4 cut(s)	708, 714, 816, 2040
MslI	CAYNNNNRTG	1 cut(s)	1458
Msp20I	TGGCCA	1 cut(s)	1731
MspA1I	CMGCKG	4 cut(s)	788, 1388, 1436, 2011
MspCI	CTTAAG	2 cut(s)	713, 815
MspI	CCGG	5 cut(s)	256, 317, 560, 1326, 1947
Mva1269I	GAATGC	2 cut(s)	253, 680
MvaI	CCWGG	7 cut(s)	509, 617, 947, 1294, 1678, 1935, 1965
MvnI	CGCG	5 cut(s)	98, 191, 238, 1380, 1674
MwoI	GCNNNNNNNGC	8 cut(s)	208, 302, 458, 467, 476, 485, 496, 546
NciI	CCSGG	3 cut(s)	257, 1326, 1948
NcoI	CCATGG	4 cut(s)	777, 1262, 1339, 1588
NlaIV	GGNNCC	5 cut(s)	260, 767, 1223, 1924, 2016
NmeAIII	GCCGAG	6 cut(s)	187, 272, 292, 464, 500, 1933
NmuCI	GTSAC	3 cut(s)	1381, 1466, 1583
NruI	TCGCGA	2 cut(s)	98, 238
NsiI	ATGCAT	1 cut(s)	682
NspI	RCATGY	3 cut(s)	559, 1457, 2054
PaeI	GCATGC	3 cut(s)	559, 1457, 2054
PagI	TCATGA	1 cut(s)	1534
PcsI	WCGNNNNNNNCGW	1 cut(s)	2040
PctI	GAATGC	2 cut(s)	253, 680
PdmI	GAANNNNTTC	1 cut(s)	1181
PfeI	GAWTC	4 cut(s)	328, 796, 861, 1177
PfoI	TCCNGGA	2 cut(s)	507, 1292
PkrI	GCNGC	6 cut(s)	6, 339, 460, 1080, 1133, 1508
PmaCI	CACGTG	1 cut(s)	76
PmlI	CACGTG	1 cut(s)	76
Ppu21I	YACGTR	1 cut(s)	76
PpuMI	RGGWCCY	1 cut(s)	436
PshBI	ATTAAT	1 cut(s)	708
Psp5II	RGGWCCY	1 cut(s)	436
Psp6I	CCWGG	7 cut(s)	507, 615, 945, 1292, 1676, 1933, 1963
PspCI	CACGTG	1 cut(s)	76
PspEI	GGTNACC	2 cut(s)	1343, 1583
PspFI	CCCAGC	2 cut(s)	1436, 2011
PspGI	CCWGG	7 cut(s)	507, 615, 945, 1292, 1676, 1933, 1963
PspN4I	GGNNCC	5 cut(s)	260, 767, 1223, 1924, 2016
PspPPI	RGGWCCY	1 cut(s)	436
PstNI	CAGNNNCTG	2 cut(s)	836, 1043
PsuI	RGATCY	3 cut(s)	1258, 1480, 1826
PvuII	CAGCTG	2 cut(s)	788, 1436
RruI	TCGCGA	2 cut(s)	98, 238
RsaI	GTAC	3 cut(s)	148, 755, 1976
RsaNI	GTAC	3 cut(s)	147, 754, 1975
RseI	CAYNNNNRTG	1 cut(s)	1458
Rsr2I	CGGWCCG	1 cut(s)	253
RsrII	CGGWCCG	1 cut(s)	253
SaqAI	TTAA	4 cut(s)	708, 714, 816, 2040
SatI	GCNGC	6 cut(s)	5, 338, 459, 1079, 1132, 1507
SduI	GDGCHC	3 cut(s)	1465, 1820, 1954
SfaNI	GCATC	6 cut(s)	594, 667, 1029, 1030, 1779, 2001
SfcI	CTRYAG	2 cut(s)	952, 1501
SinI	GGWCC	7 cut(s)	79, 102, 253, 436, 505, 1296, 1697
SmiMI	CAYNNNNRTG	1 cut(s)	1458
SmlI	CTYRAG	4 cut(s)	464, 713, 815, 1559
SmoI	CTYRAG	4 cut(s)	464, 713, 815, 1559
SphI	GCATGC	3 cut(s)	559, 1457, 2054
Sse9I	AATT	6 cut(s)	620, 1122, 1249, 1312, 1397, 1851
SspMI	CTAG	2 cut(s)	632, 2089
StyI	CCWWGG	5 cut(s)	625, 777, 1262, 1339, 1588
TaaI	ACNGT	5 cut(s)	88, 496, 956, 988, 1930
TaiI	ACGT	6 cut(s)	21, 78, 519, 1209, 1617, 1689
TaqI	TCGA	7 cut(s)	70, 129, 326, 531, 570, 1235, 2001
TasI	AATT	6 cut(s)	620, 1122, 1249, 1312, 1397, 1851
TauI	GCSGC	3 cut(s)	7, 1081, 1134
TfiI	GAWTC	4 cut(s)	328, 796, 861, 1177
Tru1I	TTAA	4 cut(s)	708, 714, 816, 2040
Tru9I	TTAA	4 cut(s)	708, 714, 816, 2040
TscAI	CASTG	1 cut(s)	1912
TseFI	GTSAC	3 cut(s)	1381, 1466, 1583
TseI	GCWGC	3 cut(s)	337, 458, 1506
Tsp45I	GTSAC	3 cut(s)	1381, 1466, 1583
TspDTI	ATGAA	3 cut(s)	741, 1079, 1773
TspGWI	ACGGA	1 cut(s)	1992
TspRI	CASTG	1 cut(s)	1912
Vha464I	CTTAAG	2 cut(s)	713, 815
VpaK11BI	GGWCC	7 cut(s)	79, 102, 253, 436, 505, 1296, 1697
VspI	ATTAAT	1 cut(s)	708
XagI	CCTNNNNNAGG	2 cut(s)	1140, 1216
XapI	RAATTY	4 cut(s)	620, 1312, 1397, 1851
XceI	RCATGY	3 cut(s)	559, 1457, 2054
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1300
XmiI	GTMKAC	3 cut(s)	951, 1500, 1569
XmnI	GAANNNNTTC	1 cut(s)	1181
XspI	CTAG	2 cut(s)	632, 2089
Zsp2I	ATGCAT	1 cut(s)	682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.