Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0010341

Physical Location & Seq

Genomic Coordinates Forward (+)

76832336 .. 76839329

Gene Structure 6994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG551900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGCGCCGAAACGACGACGTTCGCTTCATTTCCTTCCCTTCTCTCAAACTCCCCCACTCTCCTCCTCCTTCTCCGCCGCGATTCGACCTCCGCTCCCTCTTCTCCAACAACTCGCTCAGTCATCTCATCGACTCGATCAAGGCTCGCTCGCAGCGGCCCCAGACCCGGGCCGCCGACTCGAATCGGCCGGTTCTGTGCTCGGCGTCGCTGTCCCTGACTCGGTCCGGCGACTCGGCCGAGTCCAAGTCGGACCGGAGCTGGCTGGTCAGGAAGTCGCCGCTTCTGTGCTCGGCTTCGTTGTCGCTGAGTCGGTCCGACGAGTCGACTCGGTCTGGATCGGAGGAGAGGGTTTTGATAAGCGAGGTGCTGATAAGGAACAAGGACGGCGAGGAGTTGGAGAGGAAGGACCTGGAATTGGAGGCCTTGGCGGCACTCAAGGCTTGCCGAGCAAACTCGGCACTCACTGTGCGTGAGGTCCAGGAAGACGTGCATAGGATCATTGATAGTGGCTATTTCTGCCAATGTATGCCTGTGGCCATTGATACAAGGGATGGTATCAGATTGATCTTTCAGGTAAAACCAAACCAGGAATTCCAAGGGCTAGTATGTGAAGGGGCAAATGTTCTTCCTGCCAAGTTTCTTAAGGATGCATTTTATGATGGATATGGAAAAGTTATTAATCTTAAGCGTTTGAATGAAGTAATCACTTCCATCAATGATTGGTACATGGATCGGGGACTTTTTGCCATGGTTTCAGCTGTTGAGGTTCTATCAGGAGGTATTCTTAAGTTACAAGTTTCAGAAACTGAAGTCAATAACATCGCCATACGGTTCCTTGACAGGAAGACGGGTGAGCCGACTATCGGGAAGACAAAGCCAGAGACCATACTTCGCCAACTCACAACTAAAAAAGGACAGGTCTACAGTATGCTTCAAGGAAAGAGAGATGTGGAAACGGTATTGACGATGGGGCTTATGGAAGATGTTAGCATTATTCCCCAACCAGCAGACAGTGGTAAGGTTGATATTACAATGAACGTCGTTGAGCGGCCAAGTGGAGGTTTTTCTGCTGGTGGTGGTATATCAAGTGGAATAACAAGTGGCCCTCTGTCAGGACTCATTGGAAGCTTTGCCTATTCTCATAGAAATCTCTTTGGAAGAAACCAAAAGCTGCATGTTTCTTTAGAGAGGGGCCAGATAGACTCTTTATTTCGTATAAACTACTCAGATCCATGGATTTCAGGGGATGATATGAGGACTTCCCGGACAATAATGGTTCAGAATTCAAGGACCCCTGGCACACTTATCCATGGTAACCAACTTGATGGTAGCAACTTGACCATTGGTCGCATCTCGGCTGGTATTGATTACAGCCGTCCAATTAGACCAAAGTGGAGCGGAACGGCTGGGCTTACCTTTCAGCATGCTGGTGCTCGTGATGAAAAAGGAAGTCCTATTATCAAGGATTTCTTCAGCAGTCCCCTAACTGCAAGTGGTAATAGCTATGATGATATGCTGCTTGCTAAACTTGAGACTGTCTACACAGGTTCTGGTGACAGTGGGTCTTCAATGTTGAAATTCAACATGGAACAAGGACTTCCAGTTTTGCCTGATTGGTTGTTTTTCAACAGAATGAACGCTCGTGCCAGGAAAGATCTAGAAATTGGCCCTACTCACCTTCTTTTTAGCGTATCTGGTGGCCATGTGGTTGGTAACTTCCCACCACATGAAGCATTTGTCATTGGTGGAACAAATAGTGTAAGAGGTTATGAAGAGGGTGCTGTGGGTTCTGGTAGATCTTACGCAGTTGGCTGTGGAGAAATTTCTTTCCCCCTGTTGGGGCCAGTTGGGGGAGTTATTTTTGCTGACTATGGCACGGATCTTGCATCAGGTCCAACTGTTCCTGGTGATCCTGCGGGAGCGAGGCTGAAGCCTGGAAGTGGGTATGGATATGGGTTGGGCATCAGATTGGACTCACCTTTGGGACCGCTTCGTCTTGAATATGCATTTAACGATAAGGGTACACCGAGATTTCACTTTGGGGTCGGACACCGGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag POTRA

Protein Analysis

686

Amino Acids

74.6

Weight (kDa)

8.64

Isoelectric Point (pI)

37.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Omp85	PF01103	383 - 685	1.4e-59	Omp85 superfamily domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010341)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19620
fragaria_vesca	FvH4_3g43030 FvH4_3g43030 FvH4_3g43030 FvH4_3g43030
malus_domestica	MD03G1024500.v1.1 MD11G1029600.v1.1
prunus_persica	Prupe.6G023900_v2.0.a1 Prupe.6G023900_v2.0.a1
pyrus_communis	pycom03g02130 pycom11g02310
rosa_chinensis	RchiOBHm_Chr5g0077091
rosa_laevigata	RLG00000036659
rosa_multiflora	Rmu_co8452603.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005020
rosa_rugosa	Rorug05G0451500
rosa_samantha	Rh5AG505600 Rh5BG527600 Rh5CG551900 Rh5DG540000
rosa_wichuraiana	Rw5G047070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1992
AccBSI	CCGCTC	3 cut(s)	93, 1048, 1398
AccI	GTMKAC	3 cut(s)	323, 921, 1539
AccII	CGCG	1 cut(s)	79
AclWI	GGATC	6 cut(s)	343, 503, 738, 1223, 1887, 1904
AcoI	YGGCCR	5 cut(s)	185, 234, 534, 1049, 1699
AcsI	RAATTY	4 cut(s)	590, 1282, 1577, 1821
AcuI	CTGAAG	3 cut(s)	828, 1456, 1949
AcyI	GRCGYC	1 cut(s)	203
AfaI	GTAC	2 cut(s)	725, 2023
AflII	CTTAAG	3 cut(s)	641, 683, 785
AgsI	TTSAA	8 cut(s)	694, 935, 1287, 1569, 1576, 1582, 1627, 2000
AhdI	GACNNNNNGTC	2 cut(s)	1344, 1561
AjiI	CACGTC	1 cut(s)	487
AjnI	CCWGG	7 cut(s)	408, 477, 585, 1294, 1646, 1903, 1933
AluBI	AGCT	5 cut(s)	258, 758, 1128, 1171, 1503
AluI	AGCT	5 cut(s)	258, 758, 1128, 1171, 1503
Alw21I	GWGCWC	3 cut(s)	200, 290, 1435
Alw26I	GTCTC	2 cut(s)	875, 1526
AlwI	GGATC	6 cut(s)	343, 503, 738, 1223, 1887, 1904
AlwNI	CAGNNNCTG	2 cut(s)	806, 1550
Ama87I	CYCGRG	1 cut(s)	165
ApeKI	GCWGC	3 cut(s)	151, 1171, 1516
ApoI	RAATTY	4 cut(s)	590, 1282, 1577, 1821
AseI	ATTAAT	1 cut(s)	678
AspLEI	GCGC	1 cut(s)	6
AsuC2I	CCSGG	3 cut(s)	166, 167, 1264
AsuHPI	GGTGA	5 cut(s)	863, 1565, 1667, 1919, 1968
AvaI	CYCGRG	1 cut(s)	165
AvaII	GGWCC	8 cut(s)	222, 250, 312, 406, 475, 1290, 1892, 1985
BalI	TGGCCA	2 cut(s)	536, 1701
BauI	CACGAG	2 cut(s)	1434, 1641
BbsI	GAAGAC	4 cut(s)	489, 851, 875, 1557
Bbv12I	GWGCWC	3 cut(s)	200, 290, 1435
BbvI	GCAGC	3 cut(s)	163, 1158, 1503
BccI	CCATC	5 cut(s)	545, 653, 719, 961, 1319
BceAI	ACGGC	3 cut(s)	400, 1359, 1419
BciT130I	CCWGG	7 cut(s)	410, 479, 587, 1296, 1648, 1905, 1935
BcnI	CCSGG	3 cut(s)	166, 167, 1264
BcoDI	GTCTC	2 cut(s)	875, 1526
BfaI	CTAG	3 cut(s)	602, 1658, 2059
BfmI	CTRYAG	1 cut(s)	922
BfrI	CTTAAG	3 cut(s)	641, 683, 785
BglI	GCCNNNNNGGC	1 cut(s)	428
BglII	AGATCT	2 cut(s)	1654, 1796
BisI	GCNGC	9 cut(s)	77, 152, 155, 171, 278, 429, 1049, 1172, 1517
BlsI	GCNGC	9 cut(s)	78, 153, 156, 172, 279, 430, 1050, 1173, 1518
Bme18I	GGWCC	8 cut(s)	222, 250, 312, 406, 475, 1290, 1892, 1985
BmeRI	GACNNNNNGTC	2 cut(s)	1344, 1561
BmeT110I	CYCGRG	1 cut(s)	165
BmgBI	CACGTC	1 cut(s)	487
BmiI	GGNNCC	6 cut(s)	158, 833, 1193, 1292, 1842, 1986
BmsI	GCATC	4 cut(s)	637, 1359, 1895, 1971
BpiI	GAAGAC	4 cut(s)	489, 851, 875, 1557
BpuEI	CTTGAG	2 cut(s)	419, 1550
BpuMI	CCSGG	3 cut(s)	166, 167, 1264
BsaHI	GRCGYC	1 cut(s)	203
BsaI	GGTCTC	1 cut(s)	875
BsaJI	CCNNGG	7 cut(s)	165, 423, 595, 747, 1232, 1294, 1309
BsaWI	WCCGGW	2 cut(s)	252, 2052
BsaXI	ACNNNNNCTCC	2 cut(s)	77, 107
Bse118I	RCCGGY	1 cut(s)	187
Bse1I	ACTGG	2 cut(s)	1601, 1844
BseBI	CCWGG	7 cut(s)	410, 479, 587, 1296, 1648, 1905, 1935
BseDI	CCNNGG	7 cut(s)	165, 423, 595, 747, 1232, 1294, 1309
BseGI	GGATG	3 cut(s)	556, 652, 1252
BseMII	CTCAG	3 cut(s)	130, 296, 1239
BseNI	ACTGG	2 cut(s)	1601, 1844
BseRI	GAGGAG	4 cut(s)	51, 54, 356, 404
BseX3I	CGGCCG	2 cut(s)	185, 234
BseXI	GCAGC	3 cut(s)	163, 1158, 1503
BseYI	CCCAGC	1 cut(s)	1406
Bsh1236I	CGCG	1 cut(s)	79
Bsh1285I	CGRYCG	2 cut(s)	188, 237
BsiEI	CGRYCG	2 cut(s)	188, 237
BsiHKAI	GWGCWC	3 cut(s)	200, 290, 1435
BsiHKCI	CYCGRG	1 cut(s)	165
BsiSI	CCGG	6 cut(s)	166, 188, 225, 253, 1264, 2053
BslFI	GGGAC	4 cut(s)	196, 750, 1464, 1998
BsmAI	GTCTC	2 cut(s)	875, 1526
BsmFI	GGGAC	4 cut(s)	196, 750, 1464, 1998
Bso31I	GGTCTC	1 cut(s)	875
BsoBI	CYCGRG	1 cut(s)	165
Bsp1286I	GDGCHC	3 cut(s)	200, 290, 1435
Bsp19I	CCATGG	3 cut(s)	747, 1232, 1309
BspCNI	CTCAG	3 cut(s)	129, 297, 1238
BspFNI	CGCG	1 cut(s)	79
BspLI	GGNNCC	6 cut(s)	158, 833, 1193, 1292, 1842, 1986
BspPI	GGATC	6 cut(s)	343, 503, 738, 1223, 1887, 1904
BspTI	CTTAAG	3 cut(s)	641, 683, 785
BspTNI	GGTCTC	1 cut(s)	875
BsrBI	CCGCTC	3 cut(s)	93, 1048, 1398
BsrFI	RCCGGY	1 cut(s)	187
BsrI	ACTGG	2 cut(s)	1601, 1844
BssAI	RCCGGY	1 cut(s)	187
BssECI	CCNNGG	7 cut(s)	165, 423, 595, 747, 1232, 1294, 1309
BssNI	GRCGYC	1 cut(s)	203
BssSI	CACGAG	2 cut(s)	1434, 1641
BssT1I	CCWWGG	5 cut(s)	423, 595, 747, 1232, 1309
Bst2BI	CACGAG	2 cut(s)	1434, 1641
Bst2UI	CCWGG	7 cut(s)	410, 479, 587, 1296, 1648, 1905, 1935
Bst4CI	ACNGT	8 cut(s)	466, 831, 926, 958, 1013, 1537, 1559, 1900
Bst6I	CTCTTC	2 cut(s)	104, 1767
BstACI	GRCGYC	1 cut(s)	203
BstAFI	CTTAAG	3 cut(s)	641, 683, 785
BstC8I	GCNNGC	6 cut(s)	145, 149, 260, 442, 1425, 1521
BstDEI	CTNAG	3 cut(s)	116, 305, 1225
BstDSI	CCRYGG	3 cut(s)	747, 1232, 1309
BstEII	GGTNACC	1 cut(s)	1313
BstENI	CCTNNNNNAGG	1 cut(s)	1110
BstF5I	GGATG	3 cut(s)	556, 652, 1252
BstFNI	CGCG	1 cut(s)	79
BstHHI	GCGC	1 cut(s)	6
BstMAI	GTCTC	2 cut(s)	875, 1526
BstMCI	CGRYCG	2 cut(s)	188, 237
BstMWI	GCNNNNNNNGC	5 cut(s)	428, 437, 446, 455, 516
BstNI	CCWGG	7 cut(s)	410, 479, 587, 1296, 1648, 1905, 1935
BstNSI	RCATGY	2 cut(s)	1178, 1427
BstPI	GGTNACC	1 cut(s)	1313
BstSFI	CTRYAG	1 cut(s)	922
BstUI	CGCG	1 cut(s)	79
BstV1I	GCAGC	3 cut(s)	163, 1158, 1503
BstV2I	GAAGAC	4 cut(s)	489, 851, 875, 1557
BstX2I	RGATCY	4 cut(s)	1228, 1654, 1796, 1879
BstXI	CCANNNNNNTGG	2 cut(s)	1325, 1709
BstYI	RGATCY	4 cut(s)	1228, 1654, 1796, 1879
BstZI	CGGCCG	2 cut(s)	185, 234
BtgI	CCRYGG	3 cut(s)	747, 1232, 1309
BtgZI	GCGATG	1 cut(s)	805
BtrI	CACGTC	1 cut(s)	487
BtsCI	GGATG	3 cut(s)	556, 652, 1252
BtsIMutI	CAGTG	3 cut(s)	462, 1018, 1564
Cac8I	GCNNGC	6 cut(s)	145, 149, 260, 442, 1425, 1521
CaiI	CAGNNNCTG	2 cut(s)	806, 1550
CfoI	GCGC	1 cut(s)	6
Cfr10I	RCCGGY	1 cut(s)	187
Cfr9I	CCCGGG	1 cut(s)	165
CpoI	CGGWCCG	3 cut(s)	222, 250, 312
CseI	GACGC	1 cut(s)	192
Csp6I	GTAC	2 cut(s)	724, 2022
CspI	CGGWCCG	3 cut(s)	222, 250, 312
CviAII	CATG	9 cut(s)	727, 748, 1175, 1233, 1310, 1424, 1585, 1703, 1727
CviQI	GTAC	2 cut(s)	724, 2022
DdeI	CTNAG	3 cut(s)	116, 305, 1225
DrdI	GACNNNNNNGTC	1 cut(s)	1992
DriI	GACNNNNNGTC	2 cut(s)	1344, 1561
DseDI	GACNNNNNNGTC	1 cut(s)	1992
EaeI	YGGCCR	5 cut(s)	185, 234, 534, 1049, 1699
EagI	CGGCCG	2 cut(s)	185, 234
Eam1104I	CTCTTC	2 cut(s)	104, 1767
Eam1105I	GACNNNNNGTC	2 cut(s)	1344, 1561
EarI	CTCTTC	2 cut(s)	104, 1767
EciI	GGCGGA	1 cut(s)	63
EclXI	CGGCCG	2 cut(s)	185, 234
Eco130I	CCWWGG	5 cut(s)	423, 595, 747, 1232, 1309
Eco147I	AGGCCT	1 cut(s)	422
Eco31I	GGTCTC	1 cut(s)	875
Eco47I	GGWCC	8 cut(s)	222, 250, 312, 406, 475, 1290, 1892, 1985
Eco52I	CGGCCG	2 cut(s)	185, 234
Eco57I	CTGAAG	3 cut(s)	828, 1456, 1949
Eco88I	CYCGRG	1 cut(s)	165
Eco91I	GGTNACC	1 cut(s)	1313
EcoNI	CCTNNNNNAGG	1 cut(s)	1110
EcoO109I	RGGNCCY	2 cut(s)	406, 1290
EcoO65I	GGTNACC	1 cut(s)	1313
EcoRI	GAATTC	2 cut(s)	590, 1282
EcoRII	CCWGG	7 cut(s)	408, 477, 585, 1294, 1646, 1903, 1933
EcoT14I	CCWWGG	5 cut(s)	423, 595, 747, 1232, 1309
EcoT22I	ATGCAT	2 cut(s)	652, 2008
ErhI	CCWWGG	5 cut(s)	423, 595, 747, 1232, 1309
FaeI	CATG	9 cut(s)	730, 751, 1178, 1236, 1313, 1427, 1588, 1706, 1730
FalI	AAGNNNNNCTT	2 cut(s)	1454, 1486
FaqI	GGGAC	4 cut(s)	196, 750, 1464, 1998
FatI	CATG	9 cut(s)	726, 747, 1174, 1232, 1309, 1423, 1584, 1702, 1726
FauI	CCCGC	1 cut(s)	1909
FblI	GTMKAC	3 cut(s)	323, 921, 1539
Fnu4HI	GCNGC	9 cut(s)	77, 152, 155, 171, 278, 429, 1049, 1172, 1517
FokI	GGATG	3 cut(s)	563, 659, 1259
Fsp4HI	GCNGC	9 cut(s)	77, 152, 155, 171, 278, 429, 1049, 1172, 1517
FspBI	CTAG	3 cut(s)	602, 1658, 2059
GlaI	GCGC	1 cut(s)	5
GluI	GCNGC	9 cut(s)	77, 152, 155, 171, 278, 429, 1049, 1172, 1517
GsaI	CCCAGC	1 cut(s)	1410
HapII	CCGG	6 cut(s)	166, 188, 225, 253, 1264, 2053
HgaI	GACGC	1 cut(s)	192
HhaI	GCGC	1 cut(s)	6
Hin1I	GRCGYC	1 cut(s)	203
Hin1II	CATG	9 cut(s)	730, 751, 1178, 1236, 1313, 1427, 1588, 1706, 1730
Hin6I	GCGC	1 cut(s)	4
HinP1I	GCGC	1 cut(s)	4
HincII	GTYRAC	1 cut(s)	324
HindII	GTYRAC	1 cut(s)	324
HindIII	AAGCTT	1 cut(s)	1126
HpaII	CCGG	6 cut(s)	166, 188, 225, 253, 1264, 2053
HphI	GGTGA	5 cut(s)	863, 1565, 1667, 1919, 1968
Hpy166II	GTNNAC	4 cut(s)	324, 922, 1540, 2024
Hpy188I	TCNGA	9 cut(s)	250, 316, 340, 560, 802, 1228, 1281, 1967, 2048
Hpy188III	TCNNGA	8 cut(s)	268, 333, 774, 865, 1113, 1436, 1658, 1997
Hpy8I	GTNNAC	4 cut(s)	324, 922, 1540, 2024
Hpy99I	CGWCG	5 cut(s)	17, 20, 208, 320, 1043
HpyAV	CCTTC	6 cut(s)	43, 48, 78, 397, 605, 1688
HpyCH4III	ACNGT	8 cut(s)	466, 831, 926, 958, 1013, 1537, 1559, 1900
HpyCH4IV	ACGT	3 cut(s)	18, 486, 1038
HpyCH4V	TGCA	6 cut(s)	490, 650, 1174, 1490, 1886, 2006
HpyF10VI	GCNNNNNNNGC	5 cut(s)	428, 437, 446, 455, 516
HpyF3I	CTNAG	3 cut(s)	116, 305, 1225
HpySE526I	ACGT	3 cut(s)	18, 486, 1038
Hsp92I	GRCGYC	1 cut(s)	203
Hsp92II	CATG	9 cut(s)	730, 751, 1178, 1236, 1313, 1427, 1588, 1706, 1730
HspAI	GCGC	1 cut(s)	4
LmnI	GCTCC	4 cut(s)	98, 255, 1395, 1919
Lsp1109I	GCAGC	3 cut(s)	163, 1158, 1503
LweI	GCATC	4 cut(s)	637, 1359, 1895, 1971
MaeI	CTAG	3 cut(s)	602, 1658, 2059
MaeII	ACGT	3 cut(s)	18, 486, 1038
MaeIII	GTNAC	4 cut(s)	789, 1313, 1553, 1712
MbiI	CCGCTC	3 cut(s)	93, 1048, 1398
MflI	RGATCY	4 cut(s)	1228, 1654, 1796, 1879
MhlI	GDGCHC	3 cut(s)	200, 290, 1435
MlsI	TGGCCA	2 cut(s)	536, 1701
MluCI	AATT	7 cut(s)	413, 590, 1282, 1380, 1577, 1662, 1821
MluNI	TGGCCA	2 cut(s)	536, 1701
MmeI	TCCRAC	6 cut(s)	129, 228, 339, 375, 1919, 2026
Mox20I	TGGCCA	2 cut(s)	536, 1701
Mph1103I	ATGCAT	2 cut(s)	652, 2008
MscI	TGGCCA	2 cut(s)	536, 1701
MseI	TTAA	5 cut(s)	642, 678, 684, 786, 2010
MslI	CAYNNNNRTG	1 cut(s)	1428
Msp20I	TGGCCA	2 cut(s)	536, 1701
MspA1I	CMGCKG	2 cut(s)	154, 758
MspCI	CTTAAG	3 cut(s)	641, 683, 785
MspI	CCGG	6 cut(s)	166, 188, 225, 253, 1264, 2053
MvaI	CCWGG	7 cut(s)	410, 479, 587, 1296, 1648, 1905, 1935
MvnI	CGCG	1 cut(s)	79
MwoI	GCNNNNNNNGC	5 cut(s)	428, 437, 446, 455, 516
NciI	CCSGG	3 cut(s)	166, 167, 1264
NcoI	CCATGG	3 cut(s)	747, 1232, 1309
NlaIII	CATG	9 cut(s)	730, 751, 1178, 1236, 1313, 1427, 1588, 1706, 1730
NlaIV	GGNNCC	6 cut(s)	158, 833, 1193, 1292, 1842, 1986
NmeAIII	GCCGAG	7 cut(s)	179, 212, 262, 269, 434, 470, 1334
NmuCI	GTSAC	1 cut(s)	1553
NsiI	ATGCAT	2 cut(s)	652, 2008
NspI	RCATGY	2 cut(s)	1178, 1427
PaeI	GCATGC	1 cut(s)	1427
PceI	AGGCCT	1 cut(s)	422
PcsI	WCGNNNNNNNCGW	2 cut(s)	854, 962
PfeI	GAWTC	2 cut(s)	81, 181
PflFI	GACNNNGTC	2 cut(s)	220, 328
PfoI	TCCNGGA	2 cut(s)	477, 1262
PkrI	GCNGC	9 cut(s)	78, 153, 156, 172, 279, 430, 1050, 1173, 1518
PpuMI	RGGWCCY	2 cut(s)	406, 1290
PshBI	ATTAAT	1 cut(s)	678
Psp5II	RGGWCCY	2 cut(s)	406, 1290
Psp6I	CCWGG	7 cut(s)	408, 477, 585, 1294, 1646, 1903, 1933
PspEI	GGTNACC	1 cut(s)	1313
PspFI	CCCAGC	1 cut(s)	1406
PspGI	CCWGG	7 cut(s)	408, 477, 585, 1294, 1646, 1903, 1933
PspN4I	GGNNCC	6 cut(s)	158, 833, 1193, 1292, 1842, 1986
PspPPI	RGGWCCY	2 cut(s)	406, 1290
PstNI	CAGNNNCTG	2 cut(s)	806, 1550
PsuI	RGATCY	4 cut(s)	1228, 1654, 1796, 1879
PsyI	GACNNNGTC	2 cut(s)	220, 328
PvuII	CAGCTG	1 cut(s)	758
RsaI	GTAC	2 cut(s)	725, 2023
RsaNI	GTAC	2 cut(s)	724, 2022
RseI	CAYNNNNRTG	1 cut(s)	1428
Rsr2I	CGGWCCG	3 cut(s)	222, 250, 312
RsrII	CGGWCCG	3 cut(s)	222, 250, 312
SalI	GTCGAC	1 cut(s)	322
SaqAI	TTAA	5 cut(s)	642, 678, 684, 786, 2010
SatI	GCNGC	9 cut(s)	77, 152, 155, 171, 278, 429, 1049, 1172, 1517
SduI	GDGCHC	3 cut(s)	200, 290, 1435
SfaNI	GCATC	4 cut(s)	637, 1359, 1895, 1971
SfcI	CTRYAG	1 cut(s)	922
SinI	GGWCC	8 cut(s)	222, 250, 312, 406, 475, 1290, 1892, 1985
SmaI	CCCGGG	1 cut(s)	167
SmiMI	CAYNNNNRTG	1 cut(s)	1428
SmlI	CTYRAG	5 cut(s)	434, 641, 683, 785, 1529
SmoI	CTYRAG	5 cut(s)	434, 641, 683, 785, 1529
SphI	GCATGC	1 cut(s)	1427
Sse9I	AATT	7 cut(s)	413, 590, 1282, 1380, 1577, 1662, 1821
SseBI	AGGCCT	1 cut(s)	422
SspMI	CTAG	3 cut(s)	602, 1658, 2059
StuI	AGGCCT	1 cut(s)	422
StyI	CCWWGG	5 cut(s)	423, 595, 747, 1232, 1309
TaaI	ACNGT	8 cut(s)	466, 831, 926, 958, 1013, 1537, 1559, 1900
TaiI	ACGT	3 cut(s)	21, 489, 1041
TaqI	TCGA	5 cut(s)	84, 129, 134, 179, 323
TaqII	GACCGA	3 cut(s)	210, 300, 318
TasI	AATT	7 cut(s)	413, 590, 1282, 1380, 1577, 1662, 1821
TauI	GCSGC	6 cut(s)	79, 157, 173, 280, 431, 1051
TfiI	GAWTC	2 cut(s)	81, 181
Tru1I	TTAA	5 cut(s)	642, 678, 684, 786, 2010
Tru9I	TTAA	5 cut(s)	642, 678, 684, 786, 2010
TscAI	CASTG	3 cut(s)	469, 1018, 1564
TseFI	GTSAC	1 cut(s)	1553
TseI	GCWGC	3 cut(s)	151, 1171, 1516
Tsp45I	GTSAC	1 cut(s)	1553
TspDTI	ATGAA	7 cut(s)	16, 711, 1049, 1455, 1649, 1743, 1785
TspGWI	ACGGA	1 cut(s)	1892
TspMI	CCCGGG	1 cut(s)	165
TspRI	CASTG	3 cut(s)	469, 1018, 1564
Tth111I	GACNNNGTC	2 cut(s)	220, 328
Vha464I	CTTAAG	3 cut(s)	641, 683, 785
VpaK11BI	GGWCC	8 cut(s)	222, 250, 312, 406, 475, 1290, 1892, 1985
VspI	ATTAAT	1 cut(s)	678
XagI	CCTNNNNNAGG	1 cut(s)	1110
XapI	RAATTY	4 cut(s)	590, 1282, 1577, 1821
XbaI	TCTAGA	1 cut(s)	1657
XceI	RCATGY	2 cut(s)	1178, 1427
XmaI	CCCGGG	1 cut(s)	165
XmiI	GTMKAC	3 cut(s)	323, 921, 1539
XspI	CTAG	3 cut(s)	602, 1658, 2059
Zsp2I	ATGCAT	2 cut(s)	652, 2008

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.