Rroxscaffold_1G00005020

Outer envelope protein 80

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0010341
Physical Location & Seq
Reverse (-)
6839741 .. 6846230
6490 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00005020.1

Sequence Viewer

Length: 2232 bp
ATGCGCCGAAACGACGACGTTCGCTTCATTTCCTTCCCTTCTCTTAAACTCCCCCACTCTCCTCCTCCTCCGCCGCGATTCGACCTCCGCTCCCTCTTCTCCAACAACTCGCTGAGTCAACTCATCGACTCGATCAAGGCTCGCTCGCAGCGGCCCCAGACCCGGTCCGGCGACTCGAATCGGCCGGTTCTGTGCTCGGCGTCGCTGTCCCTGGCTCGGTCCGGCGACTCGGCCGAGTCCAAGTCCGACCGGAGCTGGCTGGTCAGGAAGTCGCCGCTTCTGTGCTCGGCTTCGTTGTCGCTGAGTCGGTCAGACGAGTCGACTAGGTCTGGATCGGAGGAGAGGGTTTTGATAAGCGAGGTGCTGATAAGGAACAAGGATGGCGAGGAGTTGGAGAGGAAGGACCTGGAATTGGAGGCCTTGGGGGCACTCAAGGCTTGCCGAGCAAACTCGGCACTCACTGTGCGTGAGGTCCAGGAAGACGTGCATAGGATCATTGATAGTGGCTATTTCTGCCAATGTATGCCTGTGGCCATTGATACGAGGGATGGTATCAGATTGATATTTCAGGTAAAACCAAACCAGGAATTCCAAGGACTAGTATGTGAAGGGGCAAATGTTCTTCCTGCCAAGTTTCTTAAGGATGCATTTTATGATGGATATGGAAAAGTTATTAATCTTAAGCGTTTGAATGAAGTAATCACTTCCATCAATGATTGGTACATGGATCGGGGACTTTTTGCCATGGTTTCAGCTGTGGAGGTTCTATCAGGAGGTATTCTTAAGTTACAAGTTTCAGAAACTGAAGTCAATAACATCGCCATACGGTTCCTTGACAGGAAGACGGGTGAGCCAACTATAGGGAAGACAAAGCCAGAAACCATACTTCGCCAACTCACAACTAAAAAAGGACAGGTCTACAGTATGCTTCAAGGAAAGAGAGATGTGGAAACGGTATTGACTATGGGGCTTATGGAAGATGTTAGCATTATTCCCCAACCAGCAGACAGTGGTAAGGTTGATATTACAATGAACGTCGTTGAGCGGCCAAGTGGAGGTTTTTCTGCTGGTGGTGGTATATCAAGTGGAATAACAAGTGGCCCTCTGTCAGGACTCATTGGAAGCTTTGCCTATTCTCATAGAAATCTCTTTGGAAGAAACCAAAAGCTGCATGTTTCTTTAGAGAGGGGCCAGATAGATTCTTTATTTCGTATAAACTACTCAGATCCATGGATTTCAGGGGATGATATGAGGACGTCCCGGACAATAATGGTTCAGAATTCAAGGACTCCTGGCACACTTATCCATGGTAACCAACTTGATGGTAGCAACTTGACCATTGGTCGCATCTCGGCTGGTATTGATTACAGCCGTCCAATTAGGCCAAAGTGGAGCGGAACGGCTGGGCTTACCTTTCAGCATGCTGGTGCTCGTGATGAAAAAGGAAGTCCTATTATCAAGGATTTCTTCAGCAGTCCCCTAACTGCAAGTGGTAATAGCTATGATGATATGCTGCTTGCTAAACTTGAGACTGTCTACACAGGTTCTGGTGACAGTGGGTCTTCAATGTTGAAATTCAACATGGAACAAGGACTTCCAGTTTTGCCTGATTGGTTGTTTTTCAACAGAATGAACGCTCGTGCCAGGAAAGATCTAGAAATTGGCCCTACTCACCTTCTTTTTAGCGTATCTGGTGGCCATGTGGTTGGTAACTTCCCACCACATGAAGCATTTGTCATTGGTGGAACAAATAGTGTAAGAGGTTATGAAGAAGGTGCTGTGGGTTCTGGTAGATCTTATGCAGTTGGCTCTGGAGAAATTTCTTTCCCCCTGTTGGGGCCAGTTGGGGGAGTTATTTTTGCTGACTATGGCACGGATCTTGCATCAGGTCCAACTGTTCCTGGTGATCCTGCAGGGAGCGAGGCTGAAGCCTGGAAGTGGGTATGGATATGGGTTGGGCATCAGATTGGACTCACCTTTTGGGACCGCTTCGTCTTGAATATGCATTTAACGATAAGGGTACACCAAGATTTCACTTTGGGGTCGGACACCGGAACTAGATCCTTGTATTTTTTTTCTTTCATTTTTGGTCATGTTGTACATGCCTTGCAATTGATAGGAAAGGCTTTCCCCCTCCAAACTATTGATTCATCAGATTGCCTTCCTCTGATCCTCCATCAATGGGTAGAAATAGTCACAAACTTGCATATTCCTTTCAAATTATATAGCTGA

Protein Analysis

743

Amino Acids

81.57

Weight (kDa)

6.98

Isoelectric Point (pI)

39.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Omp85 PF01103 382 - 640 2.5e-43 Omp85 superfamily domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1991
AatII GACGTC 1 cut(s) 1259
AccBSI CCGCTC 3 cut(s) 90, 1045, 1395
AccI GTMKAC 3 cut(s) 320, 918, 1536
AccII CGCG 1 cut(s) 76
AciI CCGC 8 cut(s) 71, 74, 88, 151, 275, 1045, 1395, 1987
AclWI GGATC 8 cut(s) 340, 500, 735, 1220, 1884, 1901, 2055, 2164
AcoI YGGCCR 5 cut(s) 182, 231, 531, 1046, 1696
AcsI RAATTY 4 cut(s) 587, 1279, 1574, 1818
AcuI CTGAAG 3 cut(s) 825, 1453, 1947
AcyI GRCGYC 2 cut(s) 200, 1256
AfaI GTAC 3 cut(s) 722, 2022, 2100
AflII CTTAAG 3 cut(s) 638, 680, 782
AgsI TTSAA 9 cut(s) 691, 932, 1284, 1566, 1573, 1579, 1624, 1999, 2218
AhdI GACNNNNNGTC 2 cut(s) 1341, 1558
AhlI ACTAGT 1 cut(s) 598
AjiI CACGTC 1 cut(s) 484
AjnI CCWGG 8 cut(s) 210, 405, 474, 582, 1291, 1643, 1900, 1931
AluBI AGCT 6 cut(s) 255, 755, 1125, 1168, 1500, 2229
AluI AGCT 6 cut(s) 255, 755, 1125, 1168, 1500, 2229
Alw21I GWGCWC 3 cut(s) 197, 287, 1432
Alw26I GTCTC 1 cut(s) 1523
AlwI GGATC 8 cut(s) 340, 500, 735, 1220, 1884, 1901, 2055, 2164
AlwNI CAGNNNCTG 2 cut(s) 803, 1547
ApeKI GCWGC 3 cut(s) 148, 1168, 1513
ApoI RAATTY 4 cut(s) 587, 1279, 1574, 1818
ArsI GACNNNNNNTTYG 2 cut(s) 1962, 1994
AseI ATTAAT 1 cut(s) 675
AspLEI GCGC 1 cut(s) 6
AsuC2I CCSGG 2 cut(s) 163, 1261
AsuHPI GGTGA 5 cut(s) 860, 1562, 1664, 1916, 1966
AvaII GGWCC 6 cut(s) 165, 219, 403, 472, 1889, 1984
BaeGI GKGCMC 1 cut(s) 430
BalI TGGCCA 2 cut(s) 533, 1698
BauI CACGAG 2 cut(s) 1431, 1638
BbsI GAAGAC 4 cut(s) 486, 848, 872, 1554
Bbv12I GWGCWC 3 cut(s) 197, 287, 1432
BbvI GCAGC 3 cut(s) 160, 1155, 1500
BccI CCATC 6 cut(s) 374, 542, 650, 716, 1316, 2184
BceAI ACGGC 2 cut(s) 1356, 1416
BciT130I CCWGG 8 cut(s) 212, 407, 476, 584, 1293, 1645, 1902, 1933
BcnI CCSGG 2 cut(s) 163, 1261
BcoDI GTCTC 1 cut(s) 1523
BcuI ACTAGT 1 cut(s) 598
BfaI CTAG 4 cut(s) 324, 599, 1655, 2058
BfmI CTRYAG 3 cut(s) 858, 919, 1911
BfrI CTTAAG 3 cut(s) 638, 680, 782
BglI GCCNNNNNGGC 1 cut(s) 425
BglII AGATCT 2 cut(s) 1651, 1793
BisI GCNGC 7 cut(s) 74, 149, 152, 275, 1046, 1169, 1514
BlsI GCNGC 7 cut(s) 75, 150, 153, 276, 1047, 1170, 1515
Bme18I GGWCC 6 cut(s) 165, 219, 403, 472, 1889, 1984
BmeRI GACNNNNNGTC 2 cut(s) 1341, 1558
BmgBI CACGTC 1 cut(s) 484
BmiI GGNNCC 5 cut(s) 155, 830, 1190, 1839, 1985
BmsI GCATC 4 cut(s) 634, 1356, 1892, 1969
BpiI GAAGAC 4 cut(s) 486, 848, 872, 1554
BpmI CTGGAG 1 cut(s) 1833
BpuEI CTTGAG 2 cut(s) 416, 1547
BpuMI CCSGG 2 cut(s) 163, 1261
BsaHI GRCGYC 2 cut(s) 200, 1256
BsaJI CCNNGG 6 cut(s) 210, 420, 592, 744, 1229, 1306
BsaWI WCCGGW 2 cut(s) 249, 2051
BsaXI ACNNNNNCTCC 2 cut(s) 74, 104
Bse118I RCCGGY 1 cut(s) 184
Bse1I ACTGG 2 cut(s) 1598, 1841
BseBI CCWGG 8 cut(s) 212, 407, 476, 584, 1293, 1645, 1902, 1933
BseDI CCNNGG 6 cut(s) 210, 420, 592, 744, 1229, 1306
BseGI GGATG 4 cut(s) 385, 553, 649, 1249
BseMII CTCAG 3 cut(s) 104, 293, 1236
BseNI ACTGG 2 cut(s) 1598, 1841
BseRI GAGGAG 5 cut(s) 51, 54, 57, 353, 401
BseSI GKGCMC 1 cut(s) 430
BseX3I CGGCCG 2 cut(s) 182, 231
BseXI GCAGC 3 cut(s) 160, 1155, 1500
BseYI CCCAGC 1 cut(s) 1403
Bsh1236I CGCG 1 cut(s) 76
Bsh1285I CGRYCG 3 cut(s) 185, 234, 250
BsiEI CGRYCG 3 cut(s) 185, 234, 250
BsiHKAI GWGCWC 3 cut(s) 197, 287, 1432
BsiSI CCGG 7 cut(s) 163, 168, 185, 222, 250, 1261, 2052
BslFI GGGAC 5 cut(s) 193, 747, 1243, 1461, 1997
BsmAI GTCTC 1 cut(s) 1523
BsmFI GGGAC 5 cut(s) 193, 747, 1243, 1461, 1997
Bsp1286I GDGCHC 4 cut(s) 197, 287, 430, 1432
Bsp1407I TGTACA 1 cut(s) 2098
Bsp19I CCATGG 3 cut(s) 744, 1229, 1306
BspACI CCGC 8 cut(s) 71, 74, 88, 151, 275, 1045, 1395, 1987
BspCNI CTCAG 3 cut(s) 105, 294, 1235
BspFNI CGCG 1 cut(s) 76
BspLI GGNNCC 5 cut(s) 155, 830, 1190, 1839, 1985
BspMAI CTGCAG 1 cut(s) 1915
BspPI GGATC 8 cut(s) 340, 500, 735, 1220, 1884, 1901, 2055, 2164
BspTI CTTAAG 3 cut(s) 638, 680, 782
BsrBI CCGCTC 3 cut(s) 90, 1045, 1395
BsrFI RCCGGY 1 cut(s) 184
BsrGI TGTACA 1 cut(s) 2098
BsrI ACTGG 2 cut(s) 1598, 1841
BssAI RCCGGY 1 cut(s) 184
BssECI CCNNGG 6 cut(s) 210, 420, 592, 744, 1229, 1306
BssNI GRCGYC 2 cut(s) 200, 1256
BssSI CACGAG 2 cut(s) 1431, 1638
BssT1I CCWWGG 5 cut(s) 420, 592, 744, 1229, 1306
Bst2BI CACGAG 2 cut(s) 1431, 1638
Bst2UI CCWGG 8 cut(s) 212, 407, 476, 584, 1293, 1645, 1902, 1933
Bst4CI ACNGT 8 cut(s) 463, 828, 923, 955, 1010, 1534, 1556, 1897
Bst6I CTCTTC 1 cut(s) 101
BstACI GRCGYC 2 cut(s) 200, 1256
BstAFI CTTAAG 3 cut(s) 638, 680, 782
BstAUI TGTACA 1 cut(s) 2098
BstC8I GCNNGC 6 cut(s) 142, 146, 257, 439, 1422, 1518
BstDEI CTNAG 3 cut(s) 113, 302, 1222
BstDSI CCRYGG 3 cut(s) 744, 1229, 1306
BstEII GGTNACC 1 cut(s) 1310
BstENI CCTNNNNNAGG 1 cut(s) 1107
BstF5I GGATG 4 cut(s) 385, 553, 649, 1249
BstFNI CGCG 1 cut(s) 76
BstHHI GCGC 1 cut(s) 6
BstMAI GTCTC 1 cut(s) 1523
BstMCI CGRYCG 3 cut(s) 185, 234, 250
BstMWI GCNNNNNNNGC 5 cut(s) 425, 434, 443, 452, 513
BstNI CCWGG 8 cut(s) 212, 407, 476, 584, 1293, 1645, 1902, 1933
BstNSI RCATGY 3 cut(s) 1175, 1424, 2105
BstPI GGTNACC 1 cut(s) 1310
BstSFI CTRYAG 3 cut(s) 858, 919, 1911
BstSLI GKGCMC 1 cut(s) 430
BstUI CGCG 1 cut(s) 76
BstV1I GCAGC 3 cut(s) 160, 1155, 1500
BstV2I GAAGAC 4 cut(s) 486, 848, 872, 1554
BstX2I RGATCY 5 cut(s) 1225, 1651, 1793, 1876, 2060
BstXI CCANNNNNNTGG 2 cut(s) 1322, 1706
BstYI RGATCY 5 cut(s) 1225, 1651, 1793, 1876, 2060
BstZI CGGCCG 2 cut(s) 182, 231
BtgI CCRYGG 3 cut(s) 744, 1229, 1306
BtgZI GCGATG 1 cut(s) 802
BtrI CACGTC 1 cut(s) 484
BtsCI GGATG 4 cut(s) 385, 553, 649, 1249
BtsIMutI CAGTG 3 cut(s) 459, 1015, 1561
Cac8I GCNNGC 6 cut(s) 142, 146, 257, 439, 1422, 1518
CaiI CAGNNNCTG 2 cut(s) 803, 1547
CfoI GCGC 1 cut(s) 6
Cfr10I RCCGGY 1 cut(s) 184
CpoI CGGWCCG 2 cut(s) 165, 219
CseI GACGC 1 cut(s) 189
Csp6I GTAC 3 cut(s) 721, 2021, 2099
CspI CGGWCCG 2 cut(s) 165, 219
CviQI GTAC 3 cut(s) 721, 2021, 2099
DdeI CTNAG 3 cut(s) 113, 302, 1222
DrdI GACNNNNNNGTC 1 cut(s) 1991
DriI GACNNNNNGTC 2 cut(s) 1341, 1558
DseDI GACNNNNNNGTC 1 cut(s) 1991
EaeI YGGCCR 5 cut(s) 182, 231, 531, 1046, 1696
EagI CGGCCG 2 cut(s) 182, 231
Eam1104I CTCTTC 1 cut(s) 101
Eam1105I GACNNNNNGTC 2 cut(s) 1341, 1558
EarI CTCTTC 1 cut(s) 101
EciI GGCGGA 1 cut(s) 60
EclXI CGGCCG 2 cut(s) 182, 231
Eco130I CCWWGG 5 cut(s) 420, 592, 744, 1229, 1306
Eco147I AGGCCT 1 cut(s) 419
Eco47I GGWCC 6 cut(s) 165, 219, 403, 472, 1889, 1984
Eco52I CGGCCG 2 cut(s) 182, 231
Eco57I CTGAAG 3 cut(s) 825, 1453, 1947
Eco91I GGTNACC 1 cut(s) 1310
EcoNI CCTNNNNNAGG 1 cut(s) 1107
EcoO109I RGGNCCY 1 cut(s) 403
EcoO65I GGTNACC 1 cut(s) 1310
EcoRI GAATTC 2 cut(s) 587, 1279
EcoRII CCWGG 8 cut(s) 210, 405, 474, 582, 1291, 1643, 1900, 1931
EcoT14I CCWWGG 5 cut(s) 420, 592, 744, 1229, 1306
EcoT22I ATGCAT 2 cut(s) 649, 2007
ErhI CCWWGG 5 cut(s) 420, 592, 744, 1229, 1306
FalI AAGNNNNNCTT 2 cut(s) 1451, 1483
FaqI GGGAC 5 cut(s) 193, 747, 1243, 1461, 1997
FblI GTMKAC 3 cut(s) 320, 918, 1536
Fnu4HI GCNGC 7 cut(s) 74, 149, 152, 275, 1046, 1169, 1514
FokI GGATG 4 cut(s) 392, 560, 656, 1256
Fsp4HI GCNGC 7 cut(s) 74, 149, 152, 275, 1046, 1169, 1514
FspBI CTAG 4 cut(s) 324, 599, 1655, 2058
GlaI GCGC 1 cut(s) 5
GluI GCNGC 7 cut(s) 74, 149, 152, 275, 1046, 1169, 1514
GsaI CCCAGC 1 cut(s) 1407
GsuI CTGGAG 1 cut(s) 1833
HapII CCGG 7 cut(s) 163, 168, 185, 222, 250, 1261, 2052
HgaI GACGC 1 cut(s) 189
HhaI GCGC 1 cut(s) 6
Hin1I GRCGYC 2 cut(s) 200, 1256
Hin6I GCGC 1 cut(s) 4
HinP1I GCGC 1 cut(s) 4
HincII GTYRAC 2 cut(s) 119, 321
HindII GTYRAC 2 cut(s) 119, 321
HindIII AAGCTT 1 cut(s) 1123
HpaII CCGG 7 cut(s) 163, 168, 185, 222, 250, 1261, 2052
HphI GGTGA 5 cut(s) 860, 1562, 1664, 1916, 1966
Hpy166II GTNNAC 5 cut(s) 119, 321, 919, 1537, 2023
Hpy188III TCNNGA 8 cut(s) 265, 330, 771, 1110, 1433, 1655, 1812, 1996
Hpy8I GTNNAC 5 cut(s) 119, 321, 919, 1537, 2023
Hpy99I CGWCG 4 cut(s) 17, 20, 205, 1040
HpyAV CCTTC 7 cut(s) 43, 48, 394, 602, 1685, 1766, 2171
HpyCH4III ACNGT 8 cut(s) 463, 828, 923, 955, 1010, 1534, 1556, 1897
HpyCH4IV ACGT 4 cut(s) 18, 483, 1035, 1256
HpyF10VI GCNNNNNNNGC 5 cut(s) 425, 434, 443, 452, 513
HpyF3I CTNAG 3 cut(s) 113, 302, 1222
HpySE526I ACGT 4 cut(s) 18, 483, 1035, 1256
Hsp92I GRCGYC 2 cut(s) 200, 1256
HspAI GCGC 1 cut(s) 4
LmnI GCTCC 4 cut(s) 95, 252, 1392, 1917
Lsp1109I GCAGC 3 cut(s) 160, 1155, 1500
LweI GCATC 4 cut(s) 634, 1356, 1892, 1969
MaeI CTAG 4 cut(s) 324, 599, 1655, 2058
MaeII ACGT 4 cut(s) 18, 483, 1035, 1256
MaeIII GTNAC 5 cut(s) 786, 1310, 1550, 1709, 2194
MbiI CCGCTC 3 cut(s) 90, 1045, 1395
MfeI CAATTG 1 cut(s) 2111
MflI RGATCY 5 cut(s) 1225, 1651, 1793, 1876, 2060
MhlI GDGCHC 4 cut(s) 197, 287, 430, 1432
MlsI TGGCCA 2 cut(s) 533, 1698
MluCI AATT 9 cut(s) 410, 587, 1279, 1377, 1574, 1659, 1818, 2111, 2219
MluNI TGGCCA 2 cut(s) 533, 1698
MmeI TCCRAC 5 cut(s) 126, 270, 372, 1916, 2025
Mox20I TGGCCA 2 cut(s) 533, 1698
Mph1103I ATGCAT 2 cut(s) 649, 2007
MscI TGGCCA 2 cut(s) 533, 1698
MseI TTAA 6 cut(s) 45, 639, 675, 681, 783, 2009
MslI CAYNNNNRTG 1 cut(s) 1425
Msp20I TGGCCA 2 cut(s) 533, 1698
MspA1I CMGCKG 2 cut(s) 151, 755
MspCI CTTAAG 3 cut(s) 638, 680, 782
MspI CCGG 7 cut(s) 163, 168, 185, 222, 250, 1261, 2052
MunI CAATTG 1 cut(s) 2111
MvaI CCWGG 8 cut(s) 212, 407, 476, 584, 1293, 1645, 1902, 1933
MvnI CGCG 1 cut(s) 76
MwoI GCNNNNNNNGC 5 cut(s) 425, 434, 443, 452, 513
NciI CCSGG 2 cut(s) 163, 1261
NcoI CCATGG 3 cut(s) 744, 1229, 1306
NlaIV GGNNCC 5 cut(s) 155, 830, 1190, 1839, 1985
NmeAIII GCCGAG 7 cut(s) 176, 209, 259, 266, 431, 467, 1331
NmuCI GTSAC 2 cut(s) 1550, 2194
NsiI ATGCAT 2 cut(s) 649, 2007
NspI RCATGY 3 cut(s) 1175, 1424, 2105
PaeI GCATGC 1 cut(s) 1424
PceI AGGCCT 1 cut(s) 419
PfeI GAWTC 4 cut(s) 78, 178, 1199, 2147
PflFI GACNNNGTC 2 cut(s) 163, 325
PfoI TCCNGGA 2 cut(s) 474, 1259
PkrI GCNGC 7 cut(s) 75, 150, 153, 276, 1047, 1170, 1515
PpuMI RGGWCCY 1 cut(s) 403
PshBI ATTAAT 1 cut(s) 675
Psp5II RGGWCCY 1 cut(s) 403
Psp6I CCWGG 8 cut(s) 210, 405, 474, 582, 1291, 1643, 1900, 1931
PspEI GGTNACC 1 cut(s) 1310
PspFI CCCAGC 1 cut(s) 1403
PspGI CCWGG 8 cut(s) 210, 405, 474, 582, 1291, 1643, 1900, 1931
PspN4I GGNNCC 5 cut(s) 155, 830, 1190, 1839, 1985
PspPPI RGGWCCY 1 cut(s) 403
PstI CTGCAG 1 cut(s) 1915
PstNI CAGNNNCTG 2 cut(s) 803, 1547
PsuI RGATCY 5 cut(s) 1225, 1651, 1793, 1876, 2060
PsyI GACNNNGTC 2 cut(s) 163, 325
PvuII CAGCTG 1 cut(s) 755
RsaI GTAC 3 cut(s) 722, 2022, 2100
RsaNI GTAC 3 cut(s) 721, 2021, 2099
RseI CAYNNNNRTG 1 cut(s) 1425
Rsr2I CGGWCCG 2 cut(s) 165, 219
RsrII CGGWCCG 2 cut(s) 165, 219
SalI GTCGAC 1 cut(s) 319
SaqAI TTAA 6 cut(s) 45, 639, 675, 681, 783, 2009
SatI GCNGC 7 cut(s) 74, 149, 152, 275, 1046, 1169, 1514
SbfI CCTGCAGG 1 cut(s) 1915
SdaI CCTGCAGG 1 cut(s) 1915
SduI GDGCHC 4 cut(s) 197, 287, 430, 1432
SfaNI GCATC 4 cut(s) 634, 1356, 1892, 1969
SfcI CTRYAG 3 cut(s) 858, 919, 1911
SinI GGWCC 6 cut(s) 165, 219, 403, 472, 1889, 1984
SmiMI CAYNNNNRTG 1 cut(s) 1425
SmlI CTYRAG 5 cut(s) 431, 638, 680, 782, 1526
SmoI CTYRAG 5 cut(s) 431, 638, 680, 782, 1526
SpeI ACTAGT 1 cut(s) 598
SphI GCATGC 1 cut(s) 1424
Sse8387I CCTGCAGG 1 cut(s) 1915
Sse9I AATT 9 cut(s) 410, 587, 1279, 1377, 1574, 1659, 1818, 2111, 2219
SseBI AGGCCT 1 cut(s) 419
SsiI CCGC 8 cut(s) 71, 74, 88, 151, 275, 1045, 1395, 1987
SspMI CTAG 4 cut(s) 324, 599, 1655, 2058
StuI AGGCCT 1 cut(s) 419
StyI CCWWGG 5 cut(s) 420, 592, 744, 1229, 1306
TaaI ACNGT 8 cut(s) 463, 828, 923, 955, 1010, 1534, 1556, 1897
TaiI ACGT 4 cut(s) 21, 486, 1038, 1259
TaqI TCGA 5 cut(s) 81, 126, 131, 176, 320
TaqII GACCGA 2 cut(s) 207, 297
TasI AATT 9 cut(s) 410, 587, 1279, 1377, 1574, 1659, 1818, 2111, 2219
TatI WGTACW 1 cut(s) 2098
TauI GCSGC 4 cut(s) 76, 154, 277, 1048
TfiI GAWTC 4 cut(s) 78, 178, 1199, 2147
Tru1I TTAA 6 cut(s) 45, 639, 675, 681, 783, 2009
Tru9I TTAA 6 cut(s) 45, 639, 675, 681, 783, 2009
TscAI CASTG 3 cut(s) 466, 1015, 1561
TseFI GTSAC 2 cut(s) 1550, 2194
TseI GCWGC 3 cut(s) 148, 1168, 1513
Tsp45I GTSAC 2 cut(s) 1550, 2194
TspDTI ATGAA 9 cut(s) 16, 708, 1046, 1452, 1646, 1740, 1782, 2071, 2139
TspGWI ACGGA 1 cut(s) 1889
TspRI CASTG 3 cut(s) 466, 1015, 1561
Tth111I GACNNNGTC 2 cut(s) 163, 325
Vha464I CTTAAG 3 cut(s) 638, 680, 782
VpaK11BI GGWCC 6 cut(s) 165, 219, 403, 472, 1889, 1984
VspI ATTAAT 1 cut(s) 675
XagI CCTNNNNNAGG 1 cut(s) 1107
XapI RAATTY 4 cut(s) 587, 1279, 1574, 1818
XbaI TCTAGA 1 cut(s) 1654
XceI RCATGY 3 cut(s) 1175, 1424, 2105
XmiI GTMKAC 3 cut(s) 320, 918, 1536
XspI CTAG 4 cut(s) 324, 599, 1655, 2058
ZraI GACGTC 1 cut(s) 1257
Zsp2I ATGCAT 2 cut(s) 649, 2007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.