MD03G1107200.v1.1

Protein of unknown function, DUF604

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0014929
Physical Location & Seq
Forward (+)
9230597 .. 9232793
2197 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1107200.v1.1.491

Sequence Viewer

Length: 1578 bp
ATGGGAGGCAGCAGCACCAACAGCAACCACAAACTCGAAGACTCCGAAAAGAAATCATCACCTGCACTAGTGGCTCCGCCAATGATAGGCTTAAGAGCCACCCTCACTTGGGTTTTTCTCACCATTTCTGTTCTCTATCTCCTATACTATTCCAACAGCCTTCTCTACGACCGCCAAGACTGTCCAACCACCACTTTAGATCCCTCGACCGAACGCCATCTGGAAACCCTCTCCAATGTCGCTACTTCAGCTGATCTCAAACTCGGGGAGGATGGCAAAGAAGACGACGAAGAATCCCCACAAGTGCCGGTACTCTATCAAAAGCCTCACAGATTCGACACGGAGCTTAAACACATTATGTTCGGGATAGCTGCTTCGTCGAATTTGTGGGAGAAGAGGAAGGAATACATCAAAGTTTGGTGGAGGCCTAAGGAAACTAGAGGGGTAGTTTGGTTGGACAAAAAGGTGAGGACTAGAAGAAATGAGGGACTACCCGAGATTCGGATTTCAGGTGACACCAGAGGATTTAAATACACGAATCGCCAGGGACAGCGATCTGCGTTGAGGATTTCAAGGGTGGTTTCGGAGACACTGAGGCTCGGAGTGAAGGATGTGAGATGGTTTGTGATGGGGGACGATGACACGGTTTTTATGGTGGAAAATGTGGTGAGGATTCTTAACAAGTATGACCACACGCAATTTTATTATGTGGGAAGCTCGTCAGAGAGTCATATTCAGAACATATTTTTCTCGTATTCTATGGCGTATGGCGGAGGAGGTTTTGCTATAAGTTATCCTTTGGCAGTGGAATTGGAAAAGATGCAGGACCGGTGCATTCAGCGCTATCCTGGATTATACGGCAGTGATGATCGAATGCAGGCTTGCATGGCTGAGCTAGGCGTGCCACTTACCAAGGAAACTGGATTTCATCAGTATGATGTGTATGGAGACCTACTAGGCCTTCTGAGCGCACATCCTGTGACTCCATTGGTGTCGCTTCACCACCTGGATGTAGTTGAACCAGTTTTCCCGCACATGAGTCGAGTGAAAGCGCTTCATCATCTATCCCGGTCCGTCAAGCTTGACTCAGCTAGTATAATGCAGCAATCAATCTGCTACGATAAAGATCGATACTGGTCCATCTCTGTATCATGGGGCTATGTAGTTCAAATTGTTAGGGGAATCATGTCTCCGAGAGAACTAGAGACGCCCTCCAGAACCTTTCTGAATTGGTATAGAAGAGCTGATTACACAGCATATGCATTCAACACTAGGCCTGTGTCCAAGCACCCATGTCAGAAACCCTTCATTTTCTACTTGAGCTCAACTCGCTATGATGAGGGTAGAAAGAAAATCATTGGCTACTACACTCGTCACAAATCTCCCGTTCCTCACTGCCGATGGAAAATGGCCTCACCAGAACAAGTTGATTCCATCGTAGTACTGAAAAGGCCGGATCCTCTTCGTTGGGAAAAGTCACCAAGGAAAGATTGTTGTAGAATTCTTCCATCGCAGAAGAACTCGACCATGTACTTGTTGGTCGACAATTGCAGACTAGGTGAGGTTAGTGAGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF604

Protein Analysis

526

Amino Acids

60.55

Weight (kDa)

9.01

Isoelectric Point (pI)

52.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fringe PF02434 114 - 311 3.7e-17 Fringe-like
DUF604 PF04646 246 - 499 1.2e-118 Protein of unknown function, DUF604
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014929)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07850
fragaria_vesca FvH4_3g34260
malus_domestica MD03G1107200.v1.1 MD11G1119800.v1.1
prunus_persica Prupe.6G089900_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0061811
rosa_laevigata RLG00000035508
rosa_multiflora Rmu_sc0004134.1_g000009
rosa_roxburghii Rroxscaffold_1G00018920
rosa_rugosa Rorug05G0344100 Rorug05G0344200
rosa_samantha Rh5AG405000 Rh5BG418000 Rh5CG442500 Rh5DG432100
rosa_wichuraiana Rw5G038040

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 70
Acc36I ACCTGC 1 cut(s) 70
AccI GTMKAC 1 cut(s) 1542
AciI CCGC 4 cut(s) 77, 172, 771, 1031
AclWI GGATC 3 cut(s) 194, 1451, 1464
AcsI RAATTY 2 cut(s) 382, 1500
AcuI CTGAAG 1 cut(s) 231
AcyI GRCGYC 1 cut(s) 1208
AfaI GTAC 3 cut(s) 312, 1443, 1532
AfeI AGCGCT 2 cut(s) 842, 1053
AfiI CCNNNNNNNGG 4 cut(s) 86, 108, 109, 501
AflII CTTAAG 1 cut(s) 91
AgeI ACCGGT 1 cut(s) 828
AgsI TTSAA 4 cut(s) 573, 1019, 1169, 1267
AhlI ACTAGT 1 cut(s) 67
AjnI CCWGG 3 cut(s) 543, 847, 1005
AloI GAACNNNNNNTCC 2 cut(s) 1011, 1043
AluBI AGCT 9 cut(s) 251, 346, 371, 717, 895, 1081, 1091, 1244, 1323
AluI AGCT 9 cut(s) 251, 346, 371, 717, 895, 1081, 1091, 1244, 1323
Alw21I GWGCWC 1 cut(s) 1325
Alw26I GTCTC 4 cut(s) 581, 942, 1194, 1199
AlwI GGATC 3 cut(s) 194, 1451, 1464
Ama87I CYCGRG 2 cut(s) 263, 494
Aor51HI AGCGCT 2 cut(s) 842, 1053
AoxI GGCC 5 cut(s) 425, 958, 1274, 1410, 1451
ApeKI GCWGC 4 cut(s) 9, 12, 371, 1102
ApoI RAATTY 2 cut(s) 382, 1500
AsiGI ACCGGT 1 cut(s) 828
Asp700I GAANNNNTTC 1 cut(s) 1304
AspLEI GCGC 3 cut(s) 843, 971, 1054
AspS9I GGNCC 3 cut(s) 826, 1071, 1137
AsuC2I CCSGG 1 cut(s) 1069
AsuHPI GGTGA 9 cut(s) 51, 112, 478, 524, 679, 992, 1407, 1470, 1571
AvaI CYCGRG 2 cut(s) 263, 494
AvaII GGWCC 3 cut(s) 826, 1071, 1137
AxyI CCTNAGG 1 cut(s) 429
BamHI GGATCC 1 cut(s) 1456
BanII GRGCYC 1 cut(s) 1325
BbsI GAAGAC 2 cut(s) 45, 288
Bbv12I GWGCWC 1 cut(s) 1325
BbvI GCAGC 4 cut(s) 21, 24, 358, 1114
BccI CCATC 8 cut(s) 225, 266, 612, 622, 1148, 1395, 1442, 1516
BceAI ACGGC 1 cut(s) 874
BcgI CGANNNNNNTGC 2 cut(s) 1022, 1056
BciT130I CCWGG 3 cut(s) 545, 849, 1007
BcnI CCSGG 1 cut(s) 1069
BcoDI GTCTC 4 cut(s) 581, 942, 1194, 1199
BcuI ACTAGT 1 cut(s) 67
BfaI CTAG 9 cut(s) 68, 438, 474, 896, 956, 1092, 1202, 1272, 1556
BfoI RGCGCY 2 cut(s) 844, 1055
BfrI CTTAAG 1 cut(s) 91
BfuAI ACCTGC 1 cut(s) 70
BisI GCNGC 4 cut(s) 10, 13, 372, 1103
BlpI GCTNAGC 1 cut(s) 891
BlsI GCNGC 4 cut(s) 11, 14, 373, 1104
BmcAI AGTACT 1 cut(s) 1443
Bme1390I CCNGG 4 cut(s) 545, 849, 1007, 1069
Bme18I GGWCC 3 cut(s) 826, 1071, 1137
BmeT110I CYCGRG 2 cut(s) 263, 494
BmgT120I GGNCC 3 cut(s) 826, 1071, 1137
BmiI GGNNCC 2 cut(s) 75, 1458
BmrFI CCNGG 4 cut(s) 545, 849, 1007, 1069
BmsI GCATC 1 cut(s) 810
BpiI GAAGAC 2 cut(s) 45, 288
BplI GAGNNNNNCTC 6 cut(s) 87, 119, 1196, 1228, 1312, 1344
BpmI CTGGAG 1 cut(s) 1198
Bpu1102I GCTNAGC 1 cut(s) 891
BpuEI CTTGAG 1 cut(s) 1339
BpuMI CCSGG 1 cut(s) 1069
Bsa29I ATCGAT 1 cut(s) 1129
BsaBI GATNNNNATC 1 cut(s) 1125
BsaHI GRCGYC 1 cut(s) 1208
BsaI GGTCTC 1 cut(s) 942
BsaJI CCNNGG 3 cut(s) 544, 912, 1481
BsaWI WCCGGW 1 cut(s) 828
Bsc4I CCNNNNNNNGG 4 cut(s) 86, 108, 109, 501
Bse118I RCCGGY 2 cut(s) 307, 828
Bse1I ACTGG 3 cut(s) 925, 1022, 1139
Bse21I CCTNAGG 1 cut(s) 429
Bse8I GATNNNNATC 1 cut(s) 1125
BseBI CCWGG 3 cut(s) 545, 849, 1007
BseCI ATCGAT 1 cut(s) 1129
BseDI CCNNGG 3 cut(s) 544, 912, 1481
BseGI GGATG 4 cut(s) 277, 616, 973, 1015
BseJI GATNNNNATC 1 cut(s) 1125
BseLI CCNNNNNNNGG 4 cut(s) 86, 108, 109, 501
BseMII CTCAG 4 cut(s) 584, 882, 956, 1101
BseNI ACTGG 3 cut(s) 925, 1022, 1139
BseRI GAGGAG 1 cut(s) 789
BseXI GCAGC 4 cut(s) 21, 24, 358, 1114
BsgI GTGCAG 1 cut(s) 48
Bsh1285I CGRYCG 2 cut(s) 172, 210
BshFI GGCC 5 cut(s) 427, 960, 1276, 1412, 1453
BshTI ACCGGT 1 cut(s) 828
BshVI ATCGAT 1 cut(s) 1129
BsiEI CGRYCG 2 cut(s) 172, 210
BsiHKAI GWGCWC 1 cut(s) 1325
BsiHKCI CYCGRG 2 cut(s) 263, 494
BsiSI CCGG 4 cut(s) 308, 829, 1069, 1454
BslFI GGGAC 3 cut(s) 501, 561, 647
BslI CCNNNNNNNGG 4 cut(s) 86, 108, 109, 501
BsmAI GTCTC 4 cut(s) 581, 942, 1194, 1199
BsmBI CGTCTC 1 cut(s) 1199
BsmFI GGGAC 3 cut(s) 501, 561, 647
BsmI GAATGC 3 cut(s) 834, 879, 1262
BsnI GGCC 5 cut(s) 427, 960, 1276, 1412, 1453
Bso31I GGTCTC 1 cut(s) 942
BsoBI CYCGRG 2 cut(s) 263, 494
Bsp1286I GDGCHC 1 cut(s) 1325
Bsp143I GATC 6 cut(s) 199, 253, 554, 868, 1126, 1456
Bsp1720I GCTNAGC 1 cut(s) 891
BspACI CCGC 4 cut(s) 77, 172, 771, 1031
BspANI GGCC 5 cut(s) 427, 960, 1276, 1412, 1453
BspCNI CTCAG 4 cut(s) 585, 883, 957, 1100
BspDI ATCGAT 1 cut(s) 1129
BspLI GGNNCC 2 cut(s) 75, 1458
BspMI ACCTGC 1 cut(s) 70
BspPI GGATC 3 cut(s) 194, 1451, 1464
BspQI GCTCTTC 1 cut(s) 1234
BspTI CTTAAG 1 cut(s) 91
BspTNI GGTCTC 1 cut(s) 942
BsrFI RCCGGY 2 cut(s) 307, 828
BsrI ACTGG 3 cut(s) 925, 1022, 1139
BssAI RCCGGY 2 cut(s) 307, 828
BssECI CCNNGG 3 cut(s) 544, 912, 1481
BssMI GATC 6 cut(s) 199, 253, 554, 868, 1126, 1456
BssNI GRCGYC 1 cut(s) 1208
BssT1I CCWWGG 2 cut(s) 912, 1481
Bst2UI CCWGG 3 cut(s) 545, 849, 1007
Bst4CI ACNGT 2 cut(s) 182, 646
Bst6I CTCTTC 3 cut(s) 389, 1234, 1467
BstACI GRCGYC 1 cut(s) 1208
BstAFI CTTAAG 1 cut(s) 91
BstC8I GCNNGC 3 cut(s) 879, 883, 902
BstDEI CTNAG 5 cut(s) 429, 593, 891, 965, 1087
BstF5I GGATG 4 cut(s) 277, 616, 973, 1015
BstH2I RGCGCY 2 cut(s) 844, 1055
BstHHI GCGC 3 cut(s) 843, 971, 1054
BstKTI GATC 6 cut(s) 202, 256, 557, 871, 1129, 1459
BstMAI GTCTC 4 cut(s) 581, 942, 1194, 1199
BstMBI GATC 6 cut(s) 199, 253, 554, 868, 1126, 1456
BstMCI CGRYCG 2 cut(s) 172, 210
BstMWI GCNNNNNNNGC 8 cut(s) 21, 71, 248, 840, 887, 901, 966, 1329
BstNI CCWGG 3 cut(s) 545, 849, 1007
BstSCI CCNGG 4 cut(s) 543, 847, 1005, 1067
BstV1I GCAGC 4 cut(s) 21, 24, 358, 1114
BstV2I GAAGAC 2 cut(s) 45, 288
BstX2I RGATCY 2 cut(s) 199, 1456
BstYI RGATCY 2 cut(s) 199, 1456
Bsu15I ATCGAT 1 cut(s) 1129
Bsu36I CCTNAGG 1 cut(s) 429
BsuRI GGCC 5 cut(s) 427, 960, 1276, 1412, 1453
BsuTUI ATCGAT 1 cut(s) 1129
BtgZI GCGATG 1 cut(s) 1494
BtsCI GGATG 4 cut(s) 277, 616, 973, 1015
BtsI GCAGTG 3 cut(s) 810, 868, 1393
BtsIMutI CAGTG 4 cut(s) 590, 810, 868, 1393
BveI ACCTGC 1 cut(s) 70
Cac8I GCNNGC 3 cut(s) 879, 883, 902
CfoI GCGC 3 cut(s) 843, 971, 1054
Cfr10I RCCGGY 2 cut(s) 307, 828
Cfr13I GGNCC 3 cut(s) 826, 1071, 1137
ClaI ATCGAT 1 cut(s) 1129
CpoI CGGWCCG 1 cut(s) 1071
CseI GACGC 1 cut(s) 1216
Csp6I GTAC 3 cut(s) 311, 1442, 1531
CspAI ACCGGT 1 cut(s) 828
CspI CGGWCCG 1 cut(s) 1071
CviAII CATG 6 cut(s) 886, 1036, 1152, 1186, 1293, 1528
CviQI GTAC 3 cut(s) 311, 1442, 1531
DdeI CTNAG 5 cut(s) 429, 593, 891, 965, 1087
DpnI GATC 6 cut(s) 201, 255, 556, 870, 1128, 1458
DpnII GATC 6 cut(s) 199, 253, 554, 868, 1126, 1456
DraI TTTAAA 1 cut(s) 529
Eam1104I CTCTTC 3 cut(s) 389, 1234, 1467
EarI CTCTTC 3 cut(s) 389, 1234, 1467
EciI GGCGGA 2 cut(s) 66, 786
Ecl136II GAGCTC 1 cut(s) 1323
Eco130I CCWWGG 2 cut(s) 912, 1481
Eco147I AGGCCT 3 cut(s) 427, 960, 1276
Eco24I GRGCYC 1 cut(s) 1325
Eco31I GGTCTC 1 cut(s) 942
Eco47I GGWCC 3 cut(s) 826, 1071, 1137
Eco47III AGCGCT 2 cut(s) 842, 1053
Eco53kI GAGCTC 1 cut(s) 1323
Eco57I CTGAAG 1 cut(s) 231
Eco81I CCTNAGG 1 cut(s) 429
Eco88I CYCGRG 2 cut(s) 263, 494
EcoICRI GAGCTC 1 cut(s) 1323
EcoRI GAATTC 1 cut(s) 1500
EcoRII CCWGG 3 cut(s) 543, 847, 1005
EcoT14I CCWWGG 2 cut(s) 912, 1481
EcoT22I ATGCAT 1 cut(s) 1264
EcoT38I GRGCYC 1 cut(s) 1325
ErhI CCWWGG 2 cut(s) 912, 1481
Esp3I CGTCTC 1 cut(s) 1199
FaeI CATG 6 cut(s) 889, 1039, 1155, 1189, 1296, 1531
FalI AAGNNNNNCTT 2 cut(s) 781, 813
FaqI GGGAC 3 cut(s) 501, 561, 647
FatI CATG 6 cut(s) 885, 1035, 1151, 1185, 1292, 1527
FauI CCCGC 1 cut(s) 1038
FauNDI CATATG 1 cut(s) 1258
FblI GTMKAC 1 cut(s) 1542
Fnu4HI GCNGC 4 cut(s) 10, 13, 372, 1103
FokI GGATG 4 cut(s) 284, 623, 960, 1022
FriOI GRGCYC 1 cut(s) 1325
Fsp4HI GCNGC 4 cut(s) 10, 13, 372, 1103
FspBI CTAG 9 cut(s) 68, 438, 474, 896, 956, 1092, 1202, 1272, 1556
GlaI GCGC 3 cut(s) 842, 970, 1053
GluI GCNGC 4 cut(s) 10, 13, 372, 1103
GsuI CTGGAG 1 cut(s) 1198
HaeII RGCGCY 2 cut(s) 844, 1055
HaeIII GGCC 5 cut(s) 427, 960, 1276, 1412, 1453
HapII CCGG 4 cut(s) 308, 829, 1069, 1454
HgaI GACGC 1 cut(s) 1216
HhaI GCGC 3 cut(s) 843, 971, 1054
Hin1I GRCGYC 1 cut(s) 1208
Hin1II CATG 6 cut(s) 889, 1039, 1155, 1189, 1296, 1531
Hin6I GCGC 3 cut(s) 841, 969, 1052
HinP1I GCGC 3 cut(s) 841, 969, 1052
HincII GTYRAC 1 cut(s) 1543
HindII GTYRAC 1 cut(s) 1543
HindIII AAGCTT 1 cut(s) 1079
HpaII CCGG 4 cut(s) 308, 829, 1069, 1454
HphI GGTGA 9 cut(s) 51, 112, 478, 524, 679, 992, 1407, 1470, 1571
Hpy166II GTNNAC 1 cut(s) 1543
Hpy188III TCNNGA 3 cut(s) 221, 364, 1215
Hpy8I GTNNAC 1 cut(s) 1543
Hpy99I CGWCG 2 cut(s) 290, 382
HpyAV CCTTC 5 cut(s) 170, 394, 601, 971, 1315
HpyCH4III ACNGT 2 cut(s) 182, 646
HpyCH4V TGCA 8 cut(s) 65, 823, 834, 877, 885, 1102, 1262, 1551
HpyF10VI GCNNNNNNNGC 8 cut(s) 21, 71, 248, 840, 887, 901, 966, 1329
HpyF3I CTNAG 5 cut(s) 429, 593, 891, 965, 1087
Hsp92I GRCGYC 1 cut(s) 1208
Hsp92II CATG 6 cut(s) 889, 1039, 1155, 1189, 1296, 1531
HspAI GCGC 3 cut(s) 841, 969, 1052
Kzo9I GATC 6 cut(s) 199, 253, 554, 868, 1126, 1456
LguI GCTCTTC 1 cut(s) 1234
LmnI GCTCC 2 cut(s) 79, 343
Lsp1109I GCAGC 4 cut(s) 21, 24, 358, 1114
LweI GCATC 1 cut(s) 810
MaeI CTAG 9 cut(s) 68, 438, 474, 896, 956, 1092, 1202, 1272, 1556
MaeIII GTNAC 4 cut(s) 512, 979, 1373, 1476
MalI GATC 6 cut(s) 201, 255, 556, 870, 1128, 1458
MboI GATC 6 cut(s) 199, 253, 554, 868, 1126, 1456
MboII GAAGA 9 cut(s) 50, 293, 302, 406, 489, 1251, 1454, 1496, 1528
MfeI CAATTG 1 cut(s) 1546
MflI RGATCY 2 cut(s) 199, 1456
MhlI GDGCHC 1 cut(s) 1325
MluCI AATT 7 cut(s) 382, 698, 809, 1170, 1228, 1500, 1546
MlyI GAGTC 5 cut(s) 35, 736, 976, 1048, 1079
MmeI TCCRAC 3 cut(s) 177, 209, 435
Mph1103I ATGCAT 1 cut(s) 1264
MroXI GAANNNNTTC 1 cut(s) 1304
MseI TTAA 4 cut(s) 92, 348, 528, 678
MslI CAYNNNNRTG 2 cut(s) 933, 1008
MspA1I CMGCKG 1 cut(s) 251
MspCI CTTAAG 1 cut(s) 91
MspI CCGG 4 cut(s) 308, 829, 1069, 1454
MspR9I CCNGG 4 cut(s) 545, 849, 1007, 1069
MunI CAATTG 1 cut(s) 1546
Mva1269I GAATGC 3 cut(s) 834, 879, 1262
MvaI CCWGG 3 cut(s) 545, 849, 1007
MwoI GCNNNNNNNGC 8 cut(s) 21, 71, 248, 840, 887, 901, 966, 1329
NciI CCSGG 1 cut(s) 1069
NdeI CATATG 1 cut(s) 1258
NdeII GATC 6 cut(s) 199, 253, 554, 868, 1126, 1456
NlaIII CATG 6 cut(s) 889, 1039, 1155, 1189, 1296, 1531
NlaIV GGNNCC 2 cut(s) 75, 1458
NmuCI GTSAC 4 cut(s) 512, 979, 1373, 1476
NsiI ATGCAT 1 cut(s) 1264
PaqCI CACCTGC 1 cut(s) 70
PceI AGGCCT 3 cut(s) 427, 960, 1276
PciSI GCTCTTC 1 cut(s) 1234
PcsI WCGNNNNNNNCGW 1 cut(s) 42
PctI GAATGC 3 cut(s) 834, 879, 1262
PdmI GAANNNNTTC 1 cut(s) 1304
PfeI GAWTC 7 cut(s) 293, 333, 499, 538, 673, 1182, 1430
PfoI TCCNGGA 1 cut(s) 847
PinAI ACCGGT 1 cut(s) 828
PkrI GCNGC 4 cut(s) 11, 14, 373, 1104
PleI GAGTC 5 cut(s) 35, 735, 976, 1047, 1079
PpsI GAGTC 5 cut(s) 35, 735, 976, 1047, 1079
Psp124BI GAGCTC 1 cut(s) 1325
Psp6I CCWGG 3 cut(s) 543, 847, 1005
PspGI CCWGG 3 cut(s) 543, 847, 1005
PspN4I GGNNCC 2 cut(s) 75, 1458
PspPI GGNCC 3 cut(s) 826, 1071, 1137
PsuI RGATCY 2 cut(s) 199, 1456
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 3 cut(s) 312, 1443, 1532
RsaNI GTAC 3 cut(s) 311, 1442, 1531
RseI CAYNNNNRTG 2 cut(s) 933, 1008
Rsr2I CGGWCCG 1 cut(s) 1071
RsrII CGGWCCG 1 cut(s) 1071
SacI GAGCTC 1 cut(s) 1325
SalI GTCGAC 1 cut(s) 1541
SapI GCTCTTC 1 cut(s) 1234
SaqAI TTAA 4 cut(s) 92, 348, 528, 678
SatI GCNGC 4 cut(s) 10, 13, 372, 1103
Sau3AI GATC 6 cut(s) 199, 253, 554, 868, 1126, 1456
Sau96I GGNCC 3 cut(s) 826, 1071, 1137
ScaI AGTACT 1 cut(s) 1443
SchI GAGTC 5 cut(s) 35, 736, 976, 1048, 1079
ScrFI CCNGG 4 cut(s) 545, 849, 1007, 1069
SduI GDGCHC 1 cut(s) 1325
SfaNI GCATC 1 cut(s) 810
SinI GGWCC 3 cut(s) 826, 1071, 1137
SmiI ATTTAAAT 1 cut(s) 529
SmiMI CAYNNNNRTG 2 cut(s) 933, 1008
SmlI CTYRAG 2 cut(s) 91, 1318
SmoI CTYRAG 2 cut(s) 91, 1318
SpeI ACTAGT 1 cut(s) 67
Sse9I AATT 7 cut(s) 382, 698, 809, 1170, 1228, 1500, 1546
SseBI AGGCCT 3 cut(s) 427, 960, 1276
SsiI CCGC 4 cut(s) 77, 172, 771, 1031
SspMI CTAG 9 cut(s) 68, 438, 474, 896, 956, 1092, 1202, 1272, 1556
SstI GAGCTC 1 cut(s) 1325
StuI AGGCCT 3 cut(s) 427, 960, 1276
StyD4I CCNGG 4 cut(s) 543, 847, 1005, 1067
StyI CCWWGG 2 cut(s) 912, 1481
SwaI ATTTAAAT 1 cut(s) 529
TaaI ACNGT 2 cut(s) 182, 646
TaqI TCGA 9 cut(s) 36, 206, 336, 380, 871, 1042, 1129, 1523, 1542
TaqII GACCGA 1 cut(s) 224
TasI AATT 7 cut(s) 382, 698, 809, 1170, 1228, 1500, 1546
TatI WGTACW 2 cut(s) 1441, 1530
TfiI GAWTC 7 cut(s) 293, 333, 499, 538, 673, 1182, 1430
Tru1I TTAA 4 cut(s) 92, 348, 528, 678
Tru9I TTAA 4 cut(s) 92, 348, 528, 678
TscAI CASTG 4 cut(s) 597, 810, 868, 1400
TseFI GTSAC 4 cut(s) 512, 979, 1373, 1476
TseI GCWGC 4 cut(s) 9, 12, 371, 1102
Tsp45I GTSAC 4 cut(s) 512, 979, 1373, 1476
TspDTI ATGAA 3 cut(s) 917, 1046, 1297
TspGWI ACGGA 2 cut(s) 356, 1063
TspRI CASTG 4 cut(s) 597, 810, 868, 1400
Vha464I CTTAAG 1 cut(s) 91
VpaK11BI GGWCC 3 cut(s) 826, 1071, 1137
XapI RAATTY 2 cut(s) 382, 1500
XcmI CCANNNNNNNNNTGG 1 cut(s) 1534
XmiI GTMKAC 1 cut(s) 1542
XmnI GAANNNNTTC 1 cut(s) 1304
XspI CTAG 9 cut(s) 68, 438, 474, 896, 956, 1092, 1202, 1272, 1556
ZrmI AGTACT 1 cut(s) 1443
Zsp2I ATGCAT 1 cut(s) 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.