MD03G1283900.v1.1

ZINC FINGER protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0016399
Physical Location & Seq
Forward (+)
36441571 .. 36444162
2592 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1283900.v1.1.491

Sequence Viewer

Length: 1605 bp
ATGCTTGAGTCTTATCCTACTGCGGAAGTTATTGCACTATCACCAACAACCCTAATGGCAACGAACCGATTTGTGTGTGAAATCTGTAACAAAGGGTTTCAAAGGGATCAAAACCTTCAGCTGCACCGGCGAGGCCATAACCTTCCATGGAAGCTCCGTCAGAGAACCACAACTGAGGTTAGGAAAAGGGTCTACATATGTCCCGAGCCGACGTGTGTCCACCACAACCCAGCTCGAGCGCTAGGAGACCTCACCGGCATTAAGAAGCACTTCAGCCGGAAACATGGGGAGAAAAAATGGAAATGTGAGAAGTGCTCCAAGAAATATGCAGTGCAGTCGGACTGGAAGGCGCATCAGAAGACCTGCGGCACTAGGGAGTACAAGTGTGACTGTGGGACCATCTTTTCCAGAAGGGATAGTTTTATCACCCACAGAGCCTTTTGTGACGCATTGGCAGAAGAAAACAACAAAGTAAACCAAATGCCTATGCCACATGATCAGCTCATATCATCAATGGCCATGAACACCAACACCTCCCCCATGGGAGGAGGAGTCTCCGAATTCCTCAGTTACGATATTAACACTAACAAAAACAAGCTTCCTGAAGATCTTGTCCCAATGCCATTCAAGTCCATGAACATGAACATCCCAGGTGGTGGCGGCGGTGGTGGAGGACCAGGCATGTTCTCTAACACCACCGGTTCGCTCTTTGGCGGGCCAAGAAGCGTGTCTTCCACATCGGCCTCCAGCCTTCAGCTGAGTTCCAACAACAACAACAACAGCTCATCAGGGTTCAATTACCTTCACCACCAAGAAACCAAAAACGGAGGCAGCAGCCTAAGTAGTATTACAGGGGCTGCTCAAATGTCAGCCACCGCCTTGCTTCAAAAAGCAGCCAAAATGGGAGCCACTGCAAGCAACTCCACGATCAACTCGCCGATGATGCAGAAGAGCTTTCTTAGCAATATGGCAGGCCCTGATCACGGCCACCTCTCTAGCCCTAATTCCATTCTAAACAATAATATTCAACCCCCACCATCGTATGATCATCAGCCTCACCACTTCCAACAGCAACCTCAGCCGTCTGATCCTCAGTCACATAATTCACACAGCATGATCGGAGGGTTCACTAACCAGCTCATGCAAAAGGGCCCACAAGAAATGTCACAGCATTTTGATCATCACTCCAACAACCCATCCGCCAGCTCGGCAATGAATGACATGGGACTCTTCAGTCAAGTCTTCATGGGGATCGGCGGCGGGGGTCCCCAACAGAACTATCAGAACCACCAGGCAATGTTGAAGAATTTCGAACAAGATCATCATGATCATCAGGACATTAATAGCCCTAACAACAATTCTAGTAATACTAATTCGACGCATCGAATGAACAGCGCGCTGGGGCCTTCCACAACGCTCGATCTGCTGGGCATCGGAGGGTCGAGGCCGCCAAGCTTGCATGAGCAGCTCCACCACCACCAGCAAAGGTTGGACTTGGAGGCAATGAGTCAGCACAGATTGCCGGCAATTATGAACCCTTTTCAGCAGCAGCAACAACGCTCGCACGGAGATTCGGCTATGGAAAAGCAGATTTGGGATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C2H2

Protein Analysis

535

Amino Acids

58.93

Weight (kDa)

8.82

Isoelectric Point (pI)

55.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2H2-2nd_BIRD-IDD PF22996 61 - 95 6.1e-23 BIRD-IDD transcription factor, second C2H2 zinc finger
C2CH-3rd_BIRD-IDD PF22995 99 - 123 3.7e-14 BIRD-IDD transcription factor, third C2HC zinc finger
C2CH-4th_BIRD-IDD PF22992 126 - 165 5.7e-25 BIRD-IDD transcription factor, fourth C2HC zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016399)

Species Orthologous Gene IDs
fragaria_vesca FvH4_c6g00070 FvH4_c6g00070
malus_domestica MD03G1283900.v1.1 MD11G1302300.v1.1
prunus_persica Prupe.8G255800_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0293211
rosa_laevigata RLG00000011968
rosa_multiflora Rmu_ssc0000162.1_g000019
rosa_roxburghii Rroxscaffold_7G00174350
rosa_rugosa Rorug06G0233400
rosa_samantha Rh6AG346100 Rh6BG353700 Rh6CG360100 Rh6DG346500
rosa_wichuraiana Rw6G030150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1233
Acc36I ACCTGC 1 cut(s) 371
AccB7I CCANNNNNTGG 1 cut(s) 656
AccI GTMKAC 1 cut(s) 192
AccII CGCG 1 cut(s) 1397
AclWI GGATC 3 cut(s) 114, 1082, 1259
AcoI YGGCCR 2 cut(s) 516, 985
AcsI RAATTY 2 cut(s) 560, 1306
AcuI CTGAAG 5 cut(s) 101, 256, 624, 737, 1216
AfaI GTAC 1 cut(s) 380
AfeI AGCGCT 1 cut(s) 240
AfiI CCNNNNNNNGG 3 cut(s) 545, 656, 983
AflIII ACRYGT 1 cut(s) 212
AgeI ACCGGT 1 cut(s) 698
AgsI TTSAA 6 cut(s) 101, 628, 796, 887, 1028, 1303
AjiI CACGTC 1 cut(s) 213
AjnI CCWGG 3 cut(s) 649, 676, 1290
Alw21I GWGCWC 1 cut(s) 317
Alw26I GTCTC 2 cut(s) 240, 559
AlwI GGATC 3 cut(s) 114, 1082, 1259
AlwNI CAGNNNCTG 2 cut(s) 857, 977
Ama87I CYCGRG 2 cut(s) 203, 234
Aor51HI AGCGCT 1 cut(s) 240
AoxI GGCC 9 cut(s) 133, 516, 716, 741, 973, 985, 1150, 1403, 1445
ApaI GGGCCC 1 cut(s) 1154
ApeKI GCWGC 8 cut(s) 121, 831, 834, 857, 893, 1465, 1546, 1549
ApoI RAATTY 2 cut(s) 560, 1306
AseI ATTAAT 1 cut(s) 1341
AsiGI ACCGGT 1 cut(s) 698
Asp700I GAANNNNTTC 2 cut(s) 269, 1307
AspLEI GCGC 4 cut(s) 241, 352, 1397, 1399
AspS9I GGNCC 8 cut(s) 396, 674, 716, 974, 1150, 1151, 1265, 1403
AsuHPI GGTGA 5 cut(s) 33, 244, 418, 797, 1049
AsuII TTCGAA 1 cut(s) 1311
AvaI CYCGRG 2 cut(s) 203, 234
AvaII GGWCC 3 cut(s) 396, 674, 1265
BaeGI GKGCMC 1 cut(s) 1154
BalI TGGCCA 1 cut(s) 518
BanII GRGCYC 1 cut(s) 1154
BbsI GAAGAC 3 cut(s) 365, 723, 1234
Bbv12I GWGCWC 1 cut(s) 317
BbvCI CCTCAGC 1 cut(s) 1077
BbvI GCAGC 8 cut(s) 108, 843, 844, 846, 905, 1477, 1558, 1561
BccI CCATC 3 cut(s) 407, 1045, 1204
BceAI ACGGC 2 cut(s) 1000, 1066
BcgI CGANNNNNNTGC 2 cut(s) 318, 352
BciT130I CCWGG 3 cut(s) 651, 678, 1292
BclI TGATCA 5 cut(s) 496, 979, 1045, 1177, 1327
BcoDI GTCTC 2 cut(s) 240, 559
BfaI CTAG 4 cut(s) 242, 372, 996, 1362
BfoI RGCGCY 1 cut(s) 242
BfuAI ACCTGC 1 cut(s) 371
BglI GCCNNNNNGGC 1 cut(s) 1208
BglII AGATCT 1 cut(s) 607
Bme1390I CCNGG 3 cut(s) 651, 678, 1292
Bme18I GGWCC 3 cut(s) 396, 674, 1265
BmeT110I CYCGRG 2 cut(s) 203, 234
BmgBI CACGTC 1 cut(s) 213
BmgT120I GGNCC 8 cut(s) 396, 674, 716, 974, 1150, 1151, 1265, 1403
BmiI GGNNCC 6 cut(s) 397, 907, 1152, 1266, 1267, 1404
BmrFI CCNGG 3 cut(s) 651, 678, 1292
BmsI GCATC 4 cut(s) 361, 933, 1390, 1440
BoxI GACNNNNGTC 1 cut(s) 215
BpiI GAAGAC 3 cut(s) 365, 723, 1234
BplI GAGNNNNNCTC 2 cut(s) 299, 331
BpmI CTGGAG 1 cut(s) 730
Bpu10I CCTNAGC 1 cut(s) 1077
Bpu14I TTCGAA 1 cut(s) 1311
BpuEI CTTGAG 1 cut(s) 26
BsaI GGTCTC 1 cut(s) 240
BsaJI CCNNGG 3 cut(s) 146, 540, 649
BsaWI WCCGGW 1 cut(s) 698
BsaXI ACNNNNNCTCC 4 cut(s) 368, 398, 537, 567
Bsc4I CCNNNNNNNGG 3 cut(s) 545, 656, 983
Bse118I RCCGGY 4 cut(s) 126, 254, 698, 1522
Bse1I ACTGG 1 cut(s) 347
Bse3DI GCAATG 3 cut(s) 1218, 1302, 1509
BseBI CCWGG 3 cut(s) 651, 678, 1292
BseDI CCNNGG 3 cut(s) 146, 540, 649
BseGI GGATG 3 cut(s) 645, 1196, 1603
BseLI CCNNNNNNNGG 3 cut(s) 545, 656, 983
BseMI GCAATG 3 cut(s) 1218, 1302, 1509
BseMII CTCAG 5 cut(s) 165, 580, 749, 1091, 1106
BseNI ACTGG 1 cut(s) 347
BsePI GCGCGC 1 cut(s) 1395
BseRI GAGGAG 2 cut(s) 561, 564
BseSI GKGCMC 1 cut(s) 1154
BseXI GCAGC 8 cut(s) 108, 843, 844, 846, 905, 1477, 1558, 1561
BseYI CCCAGC 3 cut(s) 229, 1399, 1426
BsgI GTGCAG 2 cut(s) 107, 353
Bsh1236I CGCG 1 cut(s) 1397
BshFI GGCC 9 cut(s) 135, 518, 718, 743, 975, 987, 1152, 1405, 1447
BshTI ACCGGT 1 cut(s) 698
BsiHKAI GWGCWC 1 cut(s) 317
BsiHKCI CYCGRG 2 cut(s) 203, 234
BsiSI CCGG 5 cut(s) 127, 255, 277, 699, 1523
BslFI GGGAC 5 cut(s) 186, 409, 599, 1239, 1251
BslI CCNNNNNNNGG 3 cut(s) 545, 656, 983
BsmAI GTCTC 2 cut(s) 240, 559
BsmFI GGGAC 5 cut(s) 186, 409, 599, 1239, 1251
BsnI GGCC 9 cut(s) 135, 518, 718, 743, 975, 987, 1152, 1405, 1447
Bso31I GGTCTC 1 cut(s) 240
BsoBI CYCGRG 2 cut(s) 203, 234
Bsp119I TTCGAA 1 cut(s) 1311
Bsp120I GGGCCC 1 cut(s) 1150
Bsp1286I GDGCHC 2 cut(s) 317, 1154
Bsp19I CCATGG 2 cut(s) 146, 540
BspANI GGCC 9 cut(s) 135, 518, 718, 743, 975, 987, 1152, 1405, 1447
BspCNI CTCAG 5 cut(s) 166, 579, 750, 1090, 1105
BspFNI CGCG 1 cut(s) 1397
BspHI TCATGA 1 cut(s) 1324
BspLI GGNNCC 6 cut(s) 397, 907, 1152, 1266, 1267, 1404
BspMI ACCTGC 1 cut(s) 371
BspPI GGATC 3 cut(s) 114, 1082, 1259
BspQI GCTCTTC 1 cut(s) 944
BspT104I TTCGAA 1 cut(s) 1311
BspTNI GGTCTC 1 cut(s) 240
BsrDI GCAATG 3 cut(s) 1218, 1302, 1509
BsrFI RCCGGY 4 cut(s) 126, 254, 698, 1522
BsrI ACTGG 1 cut(s) 347
BssAI RCCGGY 4 cut(s) 126, 254, 698, 1522
BssECI CCNNGG 3 cut(s) 146, 540, 649
BssHII GCGCGC 1 cut(s) 1395
BssT1I CCWWGG 2 cut(s) 146, 540
Bst2UI CCWGG 3 cut(s) 651, 678, 1292
Bst4CI ACNGT 1 cut(s) 392
Bst6I CTCTTC 2 cut(s) 944, 1235
BstAPI GCANNNNNTGC 1 cut(s) 1519
BstBI TTCGAA 1 cut(s) 1311
BstC8I GCNNGC 8 cut(s) 716, 916, 973, 1204, 1397, 1457, 1524, 1562
BstDEI CTNAG 7 cut(s) 174, 566, 758, 839, 959, 1077, 1092
BstDSI CCRYGG 2 cut(s) 146, 540
BstF5I GGATG 3 cut(s) 645, 1196, 1603
BstFNI CGCG 1 cut(s) 1397
BstH2I RGCGCY 1 cut(s) 242
BstHHI GCGC 4 cut(s) 241, 352, 1397, 1399
BstMAI GTCTC 2 cut(s) 240, 559
BstMWI GCNNNNNNNGC 9 cut(s) 127, 943, 960, 1078, 1208, 1423, 1456, 1465, 1519
BstNI CCWGG 3 cut(s) 651, 678, 1292
BstNSI RCATGY 1 cut(s) 685
BstPAI GACNNNNGTC 1 cut(s) 215
BstSCI CCNGG 3 cut(s) 649, 676, 1290
BstSLI GKGCMC 1 cut(s) 1154
BstUI CGCG 1 cut(s) 1397
BstV1I GCAGC 8 cut(s) 108, 843, 844, 846, 905, 1477, 1558, 1561
BstV2I GAAGAC 3 cut(s) 365, 723, 1234
BstX2I RGATCY 1 cut(s) 607
BstYI RGATCY 1 cut(s) 607
BsuRI GGCC 9 cut(s) 135, 518, 718, 743, 975, 987, 1152, 1405, 1447
BtgI CCRYGG 2 cut(s) 146, 540
BtrI CACGTC 1 cut(s) 213
BtsCI GGATG 3 cut(s) 645, 1196, 1603
BtsI GCAGTG 2 cut(s) 336, 909
BtsIMutI CAGTG 2 cut(s) 336, 909
BveI ACCTGC 1 cut(s) 371
Cac8I GCNNGC 8 cut(s) 716, 916, 973, 1204, 1397, 1457, 1524, 1562
CaiI CAGNNNCTG 2 cut(s) 857, 977
CciI TCATGA 1 cut(s) 1324
CfoI GCGC 4 cut(s) 241, 352, 1397, 1399
Cfr10I RCCGGY 4 cut(s) 126, 254, 698, 1522
Cfr13I GGNCC 8 cut(s) 396, 674, 716, 974, 1150, 1151, 1265, 1403
CseI GACGC 2 cut(s) 455, 1387
Csp6I GTAC 1 cut(s) 379
CspAI ACCGGT 1 cut(s) 698
CviQI GTAC 1 cut(s) 379
DdeI CTNAG 7 cut(s) 174, 566, 758, 839, 959, 1077, 1092
DrdI GACNNNNNNGTC 1 cut(s) 1233
DseDI GACNNNNNNGTC 1 cut(s) 1233
EaeI YGGCCR 2 cut(s) 516, 985
Eam1104I CTCTTC 2 cut(s) 944, 1235
EarI CTCTTC 2 cut(s) 944, 1235
EciI GGCGGA 1 cut(s) 1189
Eco130I CCWWGG 2 cut(s) 146, 540
Eco24I GRGCYC 1 cut(s) 1154
Eco31I GGTCTC 1 cut(s) 240
Eco47I GGWCC 3 cut(s) 396, 674, 1265
Eco47III AGCGCT 1 cut(s) 240
Eco57I CTGAAG 5 cut(s) 101, 256, 624, 737, 1216
Eco88I CYCGRG 2 cut(s) 203, 234
EcoO109I RGGNCCY 4 cut(s) 974, 1150, 1265, 1403
EcoRI GAATTC 1 cut(s) 560
EcoRII CCWGG 3 cut(s) 649, 676, 1290
EcoT14I CCWWGG 2 cut(s) 146, 540
EcoT38I GRGCYC 1 cut(s) 1154
ErhI CCWWGG 2 cut(s) 146, 540
FalI AAGNNNNNCTT 4 cut(s) 254, 286, 715, 747
FaqI GGGAC 5 cut(s) 186, 409, 599, 1239, 1251
FauI CCCGC 2 cut(s) 707, 1253
FauNDI CATATG 1 cut(s) 197
FbaI TGATCA 5 cut(s) 496, 979, 1045, 1177, 1327
FblI GTMKAC 1 cut(s) 192
FokI GGATG 2 cut(s) 632, 1183
FriOI GRGCYC 1 cut(s) 1154
FspBI CTAG 4 cut(s) 242, 372, 996, 1362
GlaI GCGC 4 cut(s) 240, 351, 1396, 1398
GsaI CCCAGC 3 cut(s) 233, 1403, 1430
GsuI CTGGAG 1 cut(s) 730
HaeII RGCGCY 1 cut(s) 242
HaeIII GGCC 9 cut(s) 135, 518, 718, 743, 975, 987, 1152, 1405, 1447
HapII CCGG 5 cut(s) 127, 255, 277, 699, 1523
HgaI GACGC 2 cut(s) 455, 1387
HhaI GCGC 4 cut(s) 241, 352, 1397, 1399
Hin6I GCGC 4 cut(s) 239, 350, 1395, 1397
HinP1I GCGC 4 cut(s) 239, 350, 1395, 1397
HindIII AAGCTT 2 cut(s) 596, 1453
HinfI GANTC 5 cut(s) 8, 552, 1227, 1507, 1571
HpaII CCGG 5 cut(s) 127, 255, 277, 699, 1523
HphI GGTGA 5 cut(s) 33, 244, 418, 797, 1049
Hpy166II GTNNAC 4 cut(s) 193, 220, 475, 1128
Hpy188I TCNGA 8 cut(s) 162, 340, 357, 559, 1087, 1121, 1284, 1436
Hpy188III TCNNGA 5 cut(s) 203, 408, 602, 1325, 1334
Hpy8I GTNNAC 4 cut(s) 193, 220, 475, 1128
Hpy99I CGWCG 2 cut(s) 214, 1381
HpyAV CCTTC 7 cut(s) 125, 152, 340, 405, 761, 812, 1416
HpyCH4III ACNGT 1 cut(s) 392
HpyCH4IV ACGT 1 cut(s) 212
HpyCH4V TGCA 8 cut(s) 35, 124, 329, 334, 914, 946, 1144, 1459
HpyF10VI GCNNNNNNNGC 9 cut(s) 127, 943, 960, 1078, 1208, 1423, 1456, 1465, 1519
HpyF3I CTNAG 7 cut(s) 174, 566, 758, 839, 959, 1077, 1092
HpySE526I ACGT 1 cut(s) 212
HspAI GCGC 4 cut(s) 239, 350, 1395, 1397
KflI GGGWCCC 1 cut(s) 1265
KroI GCCGGC 1 cut(s) 1522
KroNI GCCGGC 1 cut(s) 1524
Ksp22I TGATCA 5 cut(s) 496, 979, 1045, 1177, 1327
LguI GCTCTTC 1 cut(s) 944
LmnI GCTCC 4 cut(s) 159, 320, 905, 1473
Lsp1109I GCAGC 8 cut(s) 108, 843, 844, 846, 905, 1477, 1558, 1561
LweI GCATC 4 cut(s) 361, 933, 1390, 1440
MaeI CTAG 4 cut(s) 242, 372, 996, 1362
MaeII ACGT 1 cut(s) 212
MaeIII GTNAC 6 cut(s) 86, 386, 443, 569, 1095, 1164
MboII GAAGA 8 cut(s) 370, 470, 617, 723, 961, 1222, 1234, 1315
MflI RGATCY 1 cut(s) 607
MhlI GDGCHC 2 cut(s) 317, 1154
MlsI TGGCCA 1 cut(s) 518
MluCI AATT 8 cut(s) 560, 796, 1003, 1102, 1306, 1357, 1372, 1527
MluNI TGGCCA 1 cut(s) 518
MlyI GAGTC 4 cut(s) 17, 561, 1221, 1516
MmeI TCCRAC 5 cut(s) 318, 789, 1090, 1212, 1470
Mox20I TGGCCA 1 cut(s) 518
MroNI GCCGGC 1 cut(s) 1522
MroXI GAANNNNTTC 2 cut(s) 269, 1307
MscI TGGCCA 1 cut(s) 518
MseI TTAA 3 cut(s) 261, 579, 1341
MslI CAYNNNNRTG 1 cut(s) 638
Msp20I TGGCCA 1 cut(s) 518
MspA1I CMGCKG 2 cut(s) 121, 757
MspI CCGG 5 cut(s) 127, 255, 277, 699, 1523
MspR9I CCNGG 3 cut(s) 651, 678, 1292
MvaI CCWGG 3 cut(s) 651, 678, 1292
MvnI CGCG 1 cut(s) 1397
MwoI GCNNNNNNNGC 9 cut(s) 127, 943, 960, 1078, 1208, 1423, 1456, 1465, 1519
NaeI GCCGGC 1 cut(s) 1524
NcoI CCATGG 2 cut(s) 146, 540
NdeI CATATG 1 cut(s) 197
NgoMIV GCCGGC 1 cut(s) 1522
NlaIV GGNNCC 6 cut(s) 397, 907, 1152, 1266, 1267, 1404
NmeAIII GCCGAG 1 cut(s) 1187
NmuCI GTSAC 4 cut(s) 386, 443, 1095, 1164
NspI RCATGY 1 cut(s) 685
NspV TTCGAA 1 cut(s) 1311
PaeR7I CTCGAG 1 cut(s) 234
PagI TCATGA 1 cut(s) 1324
PauI GCGCGC 1 cut(s) 1395
PciSI GCTCTTC 1 cut(s) 944
PdiI GCCGGC 1 cut(s) 1524
PdmI GAANNNNTTC 2 cut(s) 269, 1307
PfeI GAWTC 1 cut(s) 1571
PflMI CCANNNNNTGG 1 cut(s) 656
PinAI ACCGGT 1 cut(s) 698
PleI GAGTC 4 cut(s) 16, 560, 1221, 1515
PpsI GAGTC 4 cut(s) 16, 560, 1221, 1515
PpuMI RGGWCCY 1 cut(s) 1265
PshAI GACNNNNGTC 1 cut(s) 215
PshBI ATTAAT 1 cut(s) 1341
Psp5II RGGWCCY 1 cut(s) 1265
Psp6I CCWGG 3 cut(s) 649, 676, 1290
PspFI CCCAGC 3 cut(s) 229, 1399, 1426
PspGI CCWGG 3 cut(s) 649, 676, 1290
PspN4I GGNNCC 6 cut(s) 397, 907, 1152, 1266, 1267, 1404
PspOMI GGGCCC 1 cut(s) 1150
PspPI GGNCC 8 cut(s) 396, 674, 716, 974, 1150, 1151, 1265, 1403
PspPPI RGGWCCY 1 cut(s) 1265
PspXI VCTCGAGB 1 cut(s) 234
PstNI CAGNNNCTG 2 cut(s) 857, 977
PsuI RGATCY 1 cut(s) 607
PteI GCGCGC 1 cut(s) 1395
PvuII CAGCTG 2 cut(s) 121, 757
RsaI GTAC 1 cut(s) 380
RsaNI GTAC 1 cut(s) 379
RseI CAYNNNNRTG 1 cut(s) 638
SapI GCTCTTC 1 cut(s) 944
SaqAI TTAA 3 cut(s) 261, 579, 1341
Sau96I GGNCC 8 cut(s) 396, 674, 716, 974, 1150, 1151, 1265, 1403
SchI GAGTC 4 cut(s) 17, 561, 1221, 1516
ScrFI CCNGG 3 cut(s) 651, 678, 1292
SduI GDGCHC 2 cut(s) 317, 1154
SfaNI GCATC 4 cut(s) 361, 933, 1390, 1440
Sfr274I CTCGAG 1 cut(s) 234
SfuI TTCGAA 1 cut(s) 1311
SgrAI CRCCGGYG 1 cut(s) 126
SinI GGWCC 3 cut(s) 396, 674, 1265
SlaI CTCGAG 1 cut(s) 234
SmiMI CAYNNNNRTG 1 cut(s) 638
SmlI CTYRAG 2 cut(s) 5, 234
SmoI CTYRAG 2 cut(s) 5, 234
Sse9I AATT 8 cut(s) 560, 796, 1003, 1102, 1306, 1357, 1372, 1527
SspI AATATT 1 cut(s) 1024
SspMI CTAG 4 cut(s) 242, 372, 996, 1362
StyD4I CCNGG 3 cut(s) 649, 676, 1290
StyI CCWWGG 2 cut(s) 146, 540
TaaI ACNGT 1 cut(s) 392
TaiI ACGT 1 cut(s) 215
TaqI TCGA 6 cut(s) 235, 1311, 1376, 1384, 1419, 1442
TasI AATT 8 cut(s) 560, 796, 1003, 1102, 1306, 1357, 1372, 1527
TatI WGTACW 1 cut(s) 378
TauI GCSGC 4 cut(s) 369, 663, 1260, 1450
TfiI GAWTC 1 cut(s) 1571
Tru1I TTAA 3 cut(s) 261, 579, 1341
Tru9I TTAA 3 cut(s) 261, 579, 1341
TscAI CASTG 2 cut(s) 336, 916
TseFI GTSAC 4 cut(s) 386, 443, 1095, 1164
TseI GCWGC 8 cut(s) 121, 831, 834, 857, 893, 1465, 1546, 1549
Tsp45I GTSAC 4 cut(s) 386, 443, 1095, 1164
TspDTI ATGAA 7 cut(s) 536, 650, 656, 1229, 1234, 1403, 1547
TspGWI ACGGA 3 cut(s) 146, 840, 1581
TspRI CASTG 2 cut(s) 336, 916
Van91I CCANNNNNTGG 1 cut(s) 656
VpaK11BI GGWCC 3 cut(s) 396, 674, 1265
VspI ATTAAT 1 cut(s) 1341
XapI RAATTY 2 cut(s) 560, 1306
XceI RCATGY 1 cut(s) 685
XhoI CTCGAG 1 cut(s) 234
XmiI GTMKAC 1 cut(s) 192
XmnI GAANNNNTTC 2 cut(s) 269, 1307
XspI CTAG 4 cut(s) 242, 372, 996, 1362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.